"GeneMachines DeconvoluteFile v4.1.12" "2/22/2006 2:23:35 PM" "RunName= Arabi_v.3_81 Plate" "User= ADMINISTRATOR" "Subarray1,1= 500 500 25 170 26 165" "Subarray1,2= 5000 500 25 170 26 165" "Subarray1,3= 9500 500 25 170 26 165" "Subarray1,4= 14000 500 25 170 26 165" "Subarray2,1= 500 5000 25 170 26 165" "Subarray2,2= 5000 5000 25 170 26 165" "Subarray2,3= 9500 5000 25 170 26 165" "Subarray2,4= 14000 5000 25 170 26 165" "Subarray3,1= 500 9500 25 170 26 165" "Subarray3,2= 5000 9500 25 170 26 165" "Subarray3,3= 9500 9500 25 170 26 165" "Subarray3,4= 14000 9500 25 170 26 165" "Subarray4,1= 500 14000 25 170 26 165" "Subarray4,2= 5000 14000 25 170 26 165" "Subarray4,3= 9500 14000 25 170 26 165" "Subarray4,4= 14000 14000 25 170 26 165" "Subarray5,1= 500 18500 25 170 26 165" "Subarray5,2= 5000 18500 25 170 26 165" "Subarray5,3= 9500 18500 25 170 26 165" "Subarray5,4= 14000 18500 25 170 26 165" "Subarray6,1= 500 23000 25 170 26 165" "Subarray6,2= 5000 23000 25 170 26 165" "Subarray6,3= 9500 23000 25 170 26 165" "Subarray6,4= 14000 23000 25 170 26 165" "Subarray7,1= 500 27500 25 170 26 165" "Subarray7,2= 5000 27500 25 170 26 165" "Subarray7,3= 9500 27500 25 170 26 165" "Subarray7,4= 14000 27500 25 170 26 165" "Subarray8,1= 500 32000 25 170 26 165" "Subarray8,2= 5000 32000 25 170 26 165" "Subarray8,3= 9500 32000 25 170 26 165" "Subarray8,4= 14000 32000 25 170 26 165" "Subarray9,1= 500 36500 25 170 26 165" "Subarray9,2= 5000 36500 25 170 26 165" "Subarray9,3= 9500 36500 25 170 26 165" "Subarray9,4= 14000 36500 25 170 26 165" "Subarray10,1= 500 41000 25 170 26 165" "Subarray10,2= 5000 41000 25 170 26 165" "Subarray10,3= 9500 41000 25 170 26 165" "Subarray10,4= 14000 41000 25 170 26 165" "Subarray11,1= 500 45500 25 170 26 165" "Subarray11,2= 5000 45500 25 170 26 165" "Subarray11,3= 9500 45500 25 170 26 165" "Subarray11,4= 14000 45500 25 170 26 165" "Subarray12,1= 500 50000 25 170 26 165" "Subarray12,2= 5000 50000 25 170 26 165" "Subarray12,3= 9500 50000 25 170 26 165" "Subarray12,4= 14000 50000 25 170 26 165" "SubarrRow" "SubarrCol" "Row" "Column" "ID" "Name" "opt1" "opt2 1 1 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 1 1 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 1 1 5 atc07 Randomly generated negative control 1 1 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 1 1 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 1 8 atc03 Randomly generated negative control 1 1 1 9 At1g01950 "armadillo/beta-catenin repeat family protein / kinesin motor family protein similar to kinesin-like protein GB:CAB41097 GI:5541717 from [Arabidopsis thaliana]; contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat" 1 1 1 10 At1g02010 "cytokinesis-related Sec1 protein, putative similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family; non-consensus GC donor splice site at exon boundary 46833" 1 1 1 11 At1g02100 leucine carboxyl methyltransferase family protein contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} 1 1 1 12 At1g02150 pentatricopeptide (PPR) repeat-containing protein low similiarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat 1 1 1 13 At1g02305 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase [Nicotiana rustica] GI:609175; contains Pfam profile PF00112: Papain family cysteine protease" 1 1 1 14 At1g02360 "chitinase, putative similar to chitinase precursor GI:5880845 from [Petroselinum crispum]" 1 1 1 15 At1g02530 "multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]" 1 1 1 16 At1g02590 "aldehyde oxidase, putative similar to aldehyde oxidase GB:BAA28630 GI:3172044 from [Arabidopsis thaliana]" 1 1 1 17 At1g05200 "glutamate receptor family protein (GLR3.4) plant glutamate receptor family, PMID:11379626" 1 1 1 18 At1g05250 "peroxidase, putative similar to peroxidase; peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334" 1 1 1 19 At1g05420 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 1 1 1 20 At1g05460 RNA helicase SDE3 (SDE3) identical to RNA helicase SDE3 [Arabidopsis thaliana] GI:13811296 1 1 1 21 At1g05615 hypothetical protein 1 1 1 22 At1g05670 "UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] GI:7385017; contains Pfam profiles PF00201: UDP-glucoronosyl and UDP-glucosyl transferase, PF01535: PPR repeat" 1 1 1 23 At1g05800 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 1 1 1 24 At1g05850 chitinase-like protein 1 (CTL1) similar to class I chitinase GI:7798656 from [Halimolobos perplexa var. perplexa]; contains Pfam profile PF00182: Chitinase class I; identical to cDNA chitinase-like protein 1 (CTL1) CTL1-ELP1 allele GI:17226328 1 1 1 25 At1g08340 "rac GTPase activating protein, putative similar to rac GTPase activating protein 1 GI:3695059 from [Lotus japonicus]; contains Pfam profile PF00620: RhoGAP domain" 1 1 2 1 At1g08400 chromosome structural maintenance protein-related contains weak similarity to RAD50-interacting protein 1 [Homo sapiens] gi|11967435|gb|AAG42101 1 1 2 2 At1g08570 "thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin; similar to ESTs gb|T46281, gb|R83933, gb|N65879, emb|F14466, gb|N96726, gb|AA042340, and emb|Z18150" 1 1 2 3 At1g08630 "L-allo-threonine aldolase-related similar to L-allo-threonine aldolase (EC 4.1.2.-) (L-allo-TA) (L-allo-threonine acetaldehyde-lyase) (SP:O07051) {Aeromonas jandaei}; similar to ESTs gb|R30517, gb|T42772, gb|R90493, and gb|R90493" 1 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 1 1 2 5 At1g08810 myb family transcription factor (MYB60) 1 1 2 6 At1g08970 "CCAAT-box binding transcription factor Hap5a, putative " 1 1 2 7 At1g09020 "protein kinase, putative similar to protein kinase AKINbetagamma-2 [Zea mays] GI:11139548, AKINbetagamma-1 [Zea mays] GI:11139546; contains Pfam profile PF00571: CBS domain" 1 1 2 8 At1g11620 F-box family protein contains F-box domain Pfam:PF00646 1 1 2 9 At1g11660 "heat shock protein, putative strong similarity to gb|Z70314 heat-shock protein from Arabidopsis thaliana and is a member of the PF|00012 Hsp70 protein family" 1 1 2 10 At1g11840 "lactoylglutathione lyase, putative / glyoxalase I, putative highly similar to putative lactoylglutathione lyase SP:Q39366 from [Brassica oleracea]" 1 1 2 11 At1g11870 "seryl-tRNA synthetase, putative / serine--tRNA ligase, putative similar to PIR|T03949 serine--tRNA ligase (EC 6.1.1.11) serS {Zea mays}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF02403: Seryl-tRNA synthetase N-terminal domain" 1 1 2 12 At1g11990 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.; expression supported by MPSS" 1 1 2 13 At1g12050 "fumarylacetoacetase, putative similar to fumarylacetoacetase (Fumarylacetoacetate hydrolase, Beta-diketonase, FAA)[Rattus norvegicus] SWISS-PROT:P25093" 1 1 2 14 At1g12210 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 2 15 At1g12270 "stress-inducible protein, putative similar to sti (stress inducible protein) [Glycine max] GI:872116; contains Pfam profile PF00515 TPR Domain" 1 1 2 16 At1g15020 "thioredoxin family protein low similarity to FAD-dependent sulfhydryl oxidase-2 [Rattus norvegicus] GI:12483919; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 1 1 2 17 At1g15080 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 1 1 2 18 At1g15215 expressed protein 1 1 2 19 At1g15240 "phox (PX) domain-containing protein weak similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain" 1 1 2 20 At1g15400 expressed protein ESTs gb|H37295 and gb|R64895 come from this gene 1 1 2 21 At1g15430 expressed protein 1 1 2 22 At1g15610 hypothetical protein 1 1 2 23 At1g15680 F-box family protein contains Pfam:PF00646 F-box domain 1 1 2 24 At1g18460 "lipase family protein similar to triacylglycerol lipase, gastric precursor (EC 3.1.1.3) {Canis familiaris} [SP|P80035]" 1 1 2 25 At1g18500 "2-isopropylmalate synthase, putative strong similarity to 2-isopropylmalate synthase (IMS1) [Arabidopsis thaliana] GI:12330687; contains Pfam profile PF00682: HMGL-like" 1 1 3 1 At1g18670 "protein kinase family protein contains Protein kinases ATP-binding region signature, PROSITE:PS00107 and Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 1 3 2 At1g18730 expressed protein 1 1 3 3 At1g18920 hypothetical protein contains Pfam profile PF03794: Domain of Unknown function 1 1 3 4 At1g18990 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 1 1 3 5 At1g19120 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116" 1 1 3 6 At1g19160 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 3 7 At1g22070 bZIP family transcription factor (TGA3) identical to transcription factor GI:304113 from [Arabidopsis thaliana] 1 1 3 8 At1g22130 MADS-box family protein similar to MADS-box protein (ZAP1) GI:939784 from [Zea mays] 1 1 3 9 At1g22280 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GI:4336436 from [Lotus japonicus]" 1 1 3 10 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 1 1 3 11 At1g22460 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 1 1 3 12 At1g22520 expressed protein contains Pfam PF04418: Domain of unknown function (DUF543) 1 1 3 13 At1g22690 "gibberellin-responsive protein, putative similar to SP|P46688 Gibberellin-regulated protein 2 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein" 1 1 3 14 At1g22750 expressed protein 1 1 3 15 At1g26300 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 1 1 3 16 At1g26340 "cytochrome b5, putative similar to cytochrome b5 GB:BAA74839 GI:4240120 from [Arabidopsis thaliana]" 1 1 3 17 At1g26530 "expressed protein contains Pfam profile: PF04900 protein of unknown function, DUF652; expression supported by MPSS" 1 1 3 18 At1g26590 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 1 1 3 19 At1g26740 expressed protein similar to 50S ribosomal protein L32 (SP:P80339) {Thermus thermophilus} 1 1 3 20 At1g26795 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 1 1 3 21 At1g26940 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 1 3 22 At1g27020 expressed protein 1 1 3 23 At1g29900 "carbamoyl-phosphate synthase family protein similar to carbamoylphosphate synthetase GI:6552726 from [Medicago sativa]; contains Pfam profiles PF02786: Carbamoyl-phosphate synthase L chain ATP binding domain, PF00289: Carbamoyl-phosphate synthase L chain N-terminal domain, PF02787: Carbamoyl-phosphate synthetase large chain oligomerisation domain" 1 1 3 24 At1g29950 expressed protein 1 1 3 25 At1g30110 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase GI:1888557 from [Lupinus angustifolius], [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 1 1 4 1 At1g30140 hypothetical protein 1 1 4 2 At1g30360 early-responsive to dehydration stress protein (ERD4) nearly identical to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 1 1 4 3 At1g30440 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 4 4 At1g30570 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 4 5 At1g30630 "coatomer protein epsilon subunit family protein / COPE family protein similar to SP|O14579 Coatomer epsilon subunit (Epsilon-coat protein) (Epsilon-COP) from Homo sapiens, SP|Q60445 from Cricetulus griseus; ESTs gb|Z17908, gb|AA728673, gb|N96555, gb|H76335, gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119 and AI100483 come from this gene" 1 1 4 6 At1g33610 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 1 1 4 7 At1g33710 expressed protein ; expression supported by MPSS 1 1 4 8 At1g33890 "avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family" 1 1 4 9 At1g33950 "avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 (Arabidopsis thaliana), NTGP4 GB:AAD09518 (Nicotiana tabacum); contains Pfam profile: PF00735 cell division protein (members of this family bind GTP)" 1 1 4 10 At1g34110 "leucine-rich repeat transmembrane protein kinase, putative contains similarity to receptor protein kinase-like protein GI:10177178 from [Arabidopsis thaliana]" 1 1 4 11 At1g34170 transcriptional factor B3 family protein contains Pfam profile: PF02362 B3 DNA binding domain; contains non-consensus GA donor splice site at intron 12 1 1 4 12 At1g34360 "translation initiation factor 3 (IF-3) family protein low similarity to Translation initiation factor IF-3 from [subsp. Schizaphis graminum] {Buchnera aphidicola} SP|P46243, {Salmonella typhimurium} SP|P33321; contains Pfam profiles PF05198: Translation initiation factor IF-3 N-terminal domain, PF00707: Translation initiation factor IF-3 C-terminal domain" 1 1 4 13 At1g34410 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 1 1 4 14 At1g44542 cyclase family protein contains Pfam profile: PF04199 putative cyclase 1 1 4 15 At1g44740 expressed protein ; expression supported by MPSS 1 1 4 16 At1g44890 expressed protein 1 1 4 17 At1g44970 "peroxidase, putative similar to peroxidase GI:993004 from [Mercurialis annua]" 1 1 4 18 At1g45190 "expressed protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 1 1 4 19 At1g45233 "expressed protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 1 1 4 20 At1g46768 AP2 domain-containing protein RAP2.1 (RAP2.1) identical to AP2 domain containing protein RAP2.1 GI:2281627 from [Arabidopsis thaliana] 1 1 4 21 At1g47200 "MFP1 attachment factor, putative contains similarity to MFP1 attachment factor 1 GI:7546725 from [Lycopersicon esculentum] similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659" 1 1 4 22 At1g50080 hypothetical protein 1 1 4 23 At1g50160 hypothetical protein similar to putative non-LTR retrolelement reverse transcriptase GB:AAD25836 GI:4587608 from [Arabidopsis thaliana] 1 1 4 24 At1g50370 "serine/threonine protein phosphatase, putative nearly identical to serine/threonine protein phosphatase [Arabidopsis thaliana] GI:14582206" 1 1 4 25 At1g50430 7-dehydrocholesterol reductase / 7-DHC reductase / sterol delta-7-reductase (ST7R) / dwarf5 protein (DWF5) identical to SP|Q9LDU6 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC reductase) (Sterol delta-7-reductase) (Dwarf5 protein) {Arabidopsis thaliana} 1 1 5 1 At1g50620 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 1 1 5 2 At1g50680 "AP2 domain-containing transcription factor, putative similar to RAV1 [Arabidopsis thaliana] GI:3868857" 1 1 5 3 At1g50890 expressed protein 1 1 5 4 At1g50950 thioredoxin-related contains weak hit to Pfam PF00085: Thioredoxin; contains 2 predicted transmembrane domains 1 1 5 5 At1g53610 hypothetical protein 1 1 5 6 At1g53660 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275; contains 8 predicted transmembrane domains" 1 1 5 7 At1g53830 "pectinesterase family protein identical to pectinesterase 2 (PME2/ PE 2) SP:Q42534 from [Arabidopsis thaliana];contains Pfam profiles: PF01095 pectinesterase, PF04043 plant invertase/pectin methylesterase inhibitor" 1 1 5 8 At1g53880 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profiles PF04525: Protein of unknown function (DUF567), PF01008: Initiation factor 2 subunit family" 1 1 5 9 At1g54040 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (4 repeats); similar to jsimilar to epithiospecifier (GI:16118838) [Arabidopsis thaliana] isioform contains AT-AG splice sites at intron 1 1 5 10 At1g54080 "oligouridylate-binding protein, putative similar to oligouridylate binding protein GI:6996560 from [Nicotiana plumbaginifolia]" 1 1 5 11 At1g54217 Expressed protein 1 1 5 12 At1g54270 eukaryotic translation initiation factor 4A-2 / eIF-4A-2 similar to eukaryotic translation initiation factor 4A GI:19696 from [Nicotiana plumbaginifolia] 1 1 5 13 At1g57790 F-box family protein contains Pfam PF00646: F-box domain 1 1 5 14 At1g57870 "shaggy-related protein kinase kappa, putative / ASK-kappa, putative similar to shaggy-related protein kinase kappa SP:Q39019 GI:717180 from [Arabidopsis thaliana]" 1 1 5 15 At1g58180 carbonic anhydrase family protein / carbonate dehydratase family protein similar to SP|P46512 Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase 1) {Flaveria linearis}; contains Pfam profile PF00484: Carbonic anhydrase 1 1 5 16 At1g58227 hypothetical protein 1 1 5 17 At1g58360 amino acid permease I (AAP1) identical to amino acid permease I GI:22641 from [Arabidopsis thaliana] 1 1 5 18 At1g58420 expressed protein 1 1 5 19 At1g59171 hypothetical protein contains similarity to merozoite-piroplasm surface antigen Tams1 1 1 5 20 At1g59520 expressed protein (CW7) 1 1 5 21 At1g62400 "protein kinase, putative similar to protein kinase gi|170047|gb|AAA34002; contains protein kinase domain, Pfam:PF00069" 1 1 5 22 At1g62480 vacuolar calcium-binding protein-related contains weak similarity to vacuolar calcium binding protein [Raphanus sativus] gi|9049359|dbj|BAA99394 1 1 5 23 At1g62660 "beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar identical to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis thaliana]; supported by full-length cDNA GI:14517549; identical to cDNA Beta-fructosidase GI:3115854" 1 1 5 24 At1g62720 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR repeats Pfam Profile: PF01535 1 1 5 25 At1g62855 expressed protein 1 1 6 1 At1g62910 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 2 At1g63070 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 3 At1g63110 cell division cycle protein-related contains 9 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 1 1 6 4 At1g65840 "amine oxidase family protein similar to polyamine oxidase SP:O64411 [Zea mays]; contains Pfam profile PF01593 amine oxidase, flavin-containing" 1 1 6 5 At1g65890 "acyl-activating enzyme 12 (AAE12) similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA acyl-activating enzyme 12 (At1g65890) mRNA GI:29893228, acyl-activating enzyme 12 [Arabidopsis thaliana] GI:29893229" 1 1 6 6 At1g66070 translation initiation factor-related similar to Eukaryotic translation initiation factor 3 subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j) (Swiss-Prot:O75822) [Homo sapiens] 1 1 6 7 At1g66130 oxidoreductase N-terminal domain-containing protein similar to AX110P [Daucus carota] GI:285739; contains Pfam profile PF01408: Oxidoreductase family NAD-binding Rossmann fold 1 1 6 8 At1g66260 "RNA and export factor-binding protein, putative similar to GI:7159943 from [Mus musculus] (RNA 6 (4), 638-650 (2000))" 1 1 6 9 At1g66330 senescence-associated family protein similar to senescence-associated protein (GI:12836895) [Ipomoea batatas] 1 1 6 10 At1g66500 "zinc finger (C2H2-type) family protein contains Prosite PS00028: Zinc finger, C2H2 type, domain; similar to S-locus protein 4 (GI:6069478) [Brassica rapa]; similar to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens]" 1 1 6 11 At1g66550 WRKY family transcription factor similar to DNA-binding protein 3 [Nicotiana tabacum] GI:7406995 1 1 6 12 At1g69240 "hydrolase, alpha/beta fold family protein low similarity to SP|Q40708 PIR7A protein {Oryza sativa}, polyneuridine aldehyde esterase GI:6651393 from [Rauvolfia serpentina], ethylene-induced esterase [Citrus sinensis] GI:14279437; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 6 13 At1g69290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 14 At1g69420 zinc finger (DHHC type) family protein contains Pfam profile: PF01529: DHHC zinc finger domain 1 1 6 15 At1g69480 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 1 1 6 16 At1g69600 zinc finger homeobox family protein / ZF-HD homeobox family protein 1 1 6 17 At1g69660 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 6 18 At1g69840 band 7 family protein strong similarity to hypersensitive-induced response protein [Zea mays] GI:7716466; contains Pfam profile PF01145: SPFH domain / Band 7 family 1 1 6 19 At1g69900 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 1 1 6 20 At1g72700 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0, SP|O43520]; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 1 1 6 21 At1g72760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 6 22 At1g72930 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 1 6 23 At1g72990 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:2289790 from [Bacillus circulans]; contains Pfam profile PF01301: Glycosyl hydrolases family 35 1 1 6 24 At1g73170 expressed protein 1 1 6 25 At1g73210 expressed protein 1 1 7 1 At1g73370 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative similar to sucrose synthase GI:6682841 from [Citrus unshiu]" 1 1 7 2 At1g73430 sec34-like family protein contains Pfam PF04136: Sec34-like family profile; similar to Conserved oligomeric Golgi complex component 3 (Vesicle docking protein SEC34 homolog) (p94) (Swiss-Prot:Q96JB2) [Homo sapiens] 1 1 7 3 AT5G57480 PC-1 A12 1 1 7 4 3XSSC PC-1 A24 1 1 7 5 AT1G29930 PC-1 E12 1 1 7 6 3XSSC PC-1 E24 1 1 7 7 AT3G44150 PC-1 I12 1 1 7 8 3XSSC PC-1 I24 1 1 7 9 AT4G00810 PC-1 M12 1 1 7 10 3XSSC PC-1 M24 1 1 7 11 At1g76260 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to retinoblastoma A associated protein; RbAp48 (GI:3309245) [Xenopus laevis] 1 1 7 12 At1g76320 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 1 1 7 13 At1g76450 oxygen-evolving complex-related SP:Q9S720; contains a PsbP domain 1 1 7 14 At1g76510 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain 1 1 7 15 At1g76670 "transporter-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593, GDP-Mannose transporter [Arabidopsis thaliana] GI:15487237; contains Pfam profile PF00892: Integral membrane protein" 1 1 7 16 At1g76720 "eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2" 1 1 7 17 At1g76890 "trihelix DNA-binding protein / GT-2 factor (GT2) identical to GT2 factor [Arabidopsis thaliana] GI:416490, GI:2664202 (DNA binding factor GT-2 from Arabidopsis)" 1 1 7 18 At1g76930 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 1 1 7 19 At1g79560 "FtsH protease, putative contains similarity to chloroplast FtsH protease GI:5804782 from [Nicotiana tabacum]" 1 1 7 20 At1g79610 "sodium proton exchanger, putative (NHX6) identical to Na+/H+ exchanger 6 [Arabidopsis thaliana] gi|19919848|gb|AAM08407 (Plant J. (2002) In press); contains similarity to Na+/H+ antiporter GI:1655701 from [Xenopus laevis]; contains non-consensus AT/AC splice sites; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 1 1 7 21 At1g79750 "malate oxidoreductase, putative similar to malate oxidoreductase (NADP-dependent malic enzyme) GB:P34105 (Populus balsamifera subsp. trichocarpa)" 1 1 7 22 At1g79790 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 1 1 7 23 At1g79920 "heat shock protein 70, putative / HSP70, putative contains Pfam profile: PF00012 Heat shock hsp70 proteins; similar to heat-shock proteins GB:CAA94389, GB:AAD55461 [Arabidopsis thaliana]" 1 1 7 24 At1g79970 expressed protein 1 1 7 25 At1g80110 expressed protein contains similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951 1 1 8 1 At1g80170 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase GI:7381227 from [Lycopersicon esculentum]; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 1 8 2 At2g03010 expressed protein 1 1 8 3 At2g03060 MADS-box family protein 1 1 8 4 At2g03260 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 1 1 8 5 At2g03320 hypothetical protein 1 1 8 6 At2g03505 "glycosyl hydrolase family protein 17 similar to Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1-3)-beta- glucan endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3- endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]; similar to beta 1,3-glucanase (GI:924953) [Triticum aestivum]" 1 1 8 7 At2g03560 "F-box family protein (FBX7) identical to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; contains F-box domain PF:00646" 1 1 8 8 At2g03750 "sulfotransferase family protein similar to similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 1 1 8 9 At2g03810 18S pre-ribosomal assembly protein gar2-related contains weak similarity to Swiss-Prot:P41891 protein gar2 [Schizosaccharomyces pombe] 1 1 8 10 At2g07706 expressed protein 1 1 8 11 At2g07718 "cytochrome b, putative similar to Cytochrome b (Swiss-Prot:P42792) [Arabidopsis thaliana]; similar to Cytochrome b (Swiss-Prot:P09843) [Oenothera bertiana]; contains 3 transmembrane domains" 1 1 8 12 At2g07750 "DEAD box RNA helicase, putative similar to RNA helicase RH25 [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 1 8 13 At2g09388 hypothetical protein 1 1 8 14 At2g10350 "Ulp1 protease family protein similar to At5g28170, At1g35110, At1g44880, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010 ; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 1 8 15 At2g10450 "14-3-3 protein, putative / grf15, putative contains similarity to GF14 psi chain GI:166717, SP:P42644 from [Arabidopsis thaliana]" 1 1 8 16 At2g10965 hypothetical protein 1 1 8 17 At2g11010 hypothetical protein 1 1 8 18 At2g16220 F-box family protein 1 1 8 19 At2g16290 F-box family protein contains Pfam PF00646: F-box domain; 1 1 8 20 At2g16470 "zinc finger (CCCH-type) family protein / GYF domain-containing protein contains Pfam domains PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF02213: GYF domain" 1 1 8 21 At2g16520 hypothetical protein 1 1 8 22 At2g16730 glycosyl hydrolase family 35 protein similar to beta-galactosidase BG1 GI:15081596 from [Vitis vinifera] 1 1 8 23 At2g16790 shikimate kinase family protein similar to thermosensitive glucokinase from Escherichia coli [SP|P39208] [SP|P46859]; contains Pfam profile PF01202: shikimate kinase 1 1 8 24 At2g16940 RNA recognition motif (RRM)-containing protein 1 1 8 25 At2g17000 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 1 1 9 1 At2g19800 expressed protein similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 1 1 9 2 At2g19870 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P25270 Ribose methyltransferase PET56 (EC 2.1.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 1 1 9 3 At2g20030 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 9 4 At2g20080 expressed protein 1 1 9 5 At2g20260 "photosystem I reaction center subunit IV, chloroplast, putative / PSI-E, putative (PSAE2) identical to SP|Q9S714; similar to SP|P12354 Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) {Spinacia oleracea}; contains Pfam profile PF02427: Photosystem I reaction centre subunit IV / PsaE" 1 1 9 6 At2g20320 DENN (AEX-3) domain-containing protein contains Pfam domain PF02141: DENN (AEX-3) domain 1 1 9 7 At2g20495 expressed protein 1 1 9 8 At2g20540 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 9 9 At2g23160 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 9 10 At2g23220 "cytochrome P450, putative " 1 1 9 11 At2g23390 expressed protein 1 1 9 12 At2g23450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 9 13 At2g23620 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 9 14 At2g23690 expressed protein 1 1 9 15 At2g23890 5' nucleotidase family protein contains Pfam PF05761: 5' nucleotidase family; similar to Cytosolic purine 5'-nucleotidase (EC 3.1.3.5) (5'-nucleotidase cytosolic II) (Swiss-Prot:P49902) [Homo sapiens] 1 1 9 16 At2g23945 "chloroplast nucleoid DNA-binding protein-related contains weak similarity to GP|2541876|dbj|BAA22813.1||D26015 CND41, chloroplast nucleoid DNA binding protein {Nicotiana tabacum}" 1 1 9 17 At2g26790 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 9 18 At2g26830 "choline/ethanolamine kinase family protein similar to SP|Q9HBU6 Ethanolamine kinase (EC 2.7.1.82) (EKI){Homo sapiens}, GmCK3p [Glycine max] GI:1438883; contains Pfam profile PF01633: Choline/ethanolamine kinase" 1 1 9 19 At2g26980 CBL-interacting protein kinase 3 (CIPK3) identical to CBL-interacting protein kinase 3 [Arabidopsis thaliana] gi|9280638|gb|AAF86507 1 1 9 20 At2g27030 "calmodulin-2/3/5 (CAM5) (TCH1) identical to calmodulin GI:474183 from [Arabidopsis thaliana], SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}" 1 1 9 21 At2g27160 hypothetical protein 1 1 9 22 At2g27220 homeodomain-containing protein 1 1 9 23 At2g27360 "lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 1 1 9 24 At2g27395 cysteine protease-related contains similarity to senescence-specific cysteine protease GI:5823018 from [Brassica napus] 1 1 9 25 At2g30130 LOB domain protein 12 / lateral organ boundaries domain protein 12 (LBD12) identical to SP|Q8LBW3 LOB domain protein 12 {Arabidopsis thaliana} 1 1 10 1 At2g30200 expressed protein 1 1 10 2 At2g30350 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 1 1 10 3 At2g30400 ovate family protein 57% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 1 1 10 4 At2g30560 glycine-rich protein 1 1 10 5 At2g30600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] 1 1 10 6 At2g30740 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 1 10 7 At2g30800 "DEIH-box RNA/DNA helicase, putative similar to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 1 1 10 8 At2g33410 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative " 1 1 10 9 At2g33460 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 1 1 10 10 At2g33600 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 1 1 10 11 At2g33670 "seven transmembrane MLO family protein / MLO-like protein 5 (MLO5) identical to MLO-like protein 5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 1 1 10 12 At2g33780 VQ motif-containing protein contains PF05678: VQ motif 1 1 10 13 At2g33820 mitochondrial substrate carrier family protein (BAC1) contains Pfam profile: PF00153 mitochondrial carrier protein 1 1 10 14 At2g34040 apoptosis inhibitory 5 (API5) family protein contains Pfam domain PF05918 Apoptosis inhibitory protein 5 (API5) 1 1 10 15 At2g34080 "cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]" 1 1 10 16 At2g36680 expressed protein 1 1 10 17 At2g36720 "PHD finger transcription factor, putative " 1 1 10 18 At2g36885 expressed protein 1 1 10 19 At2g36920 expressed protein 1 1 10 20 At2g37060 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 1 1 10 21 At2g37110 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 1 1 10 22 At2g37260 WRKY family transcription factor (TTG2) contains Pfam profile: PF03106 WRKY DNA -binding domain 1 1 10 23 At2g37320 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 10 24 At2g39920 acid phosphatase class B family protein weak similarity to pod storage protein [Phaseolus vulgaris GI:2627233 SP|P10743 STEM 31 kDa glycoprotein precursor (Vegetative storage protein B) {Glycine max}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 1 1 10 25 At2g39975 hypothetical protein 1 1 11 1 At2g40110 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 1 1 11 2 At2g40130 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 1 1 11 3 At2g40280 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 1 1 11 4 At2g40330 Bet v I allergen family protein contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 1 1 11 5 At2g40470 LOB domain protein 15 / lateral organ boundaries domain protein 15 (LBD15) identical to SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana}; similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana] GI:19918971 1 1 11 6 At2g40520 nucleotidyltransferase family protein contains Pfam profile: PF01909 nucleotidyltransferase domain 1 1 11 7 At2g43080 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 1 11 8 At2g43140 basic helix-loop-helix (bHLH) family protein contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain 1 1 11 9 At2g43270 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 11 10 At2g43340 expressed protein 1 1 11 11 At2g43520 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 1 1 11 12 At2g43570 "chitinase, putative similar to chitinase class IV GI:722272 from [Brassica napus]" 1 1 11 13 At2g43730 "lectin-related low similarity to lectin 3 [Helianthus tuberosus] GI:4091899, RTM1 [Arabidopsis thaliana] GI:6503088" 1 1 11 14 At2g43780 expressed protein 1 1 11 15 At2g46420 expressed protein 1 1 11 16 At2g46470 "OXA1 protein, putative similar to Oxa1 protein [Arabidopsis thaliana] GI:10176922" 1 1 11 17 At2g46610 "arginine/serine-rich splicing factor, putative similar to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana}" 1 1 11 18 At2g46670 "pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative similar to pseudo-response regulator 9 [Arabidopsis thaliana] GI:10281000, timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022" 1 1 11 19 At2g46820 expressed protein 1 1 11 20 At2g46880 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 1 11 21 At2g47020 "peptide chain release factor, putative similar to peptide chain release factor 1 [Escherichia coli] GI:147567; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 1 1 11 22 At2g47060 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 1 11 23 At3g02390 expressed protein 1 1 11 24 At3g02450 "cell division protein ftsH, putative similar to SWISS-PROT:P46469 cell division protein ftsH homolog [Lactococcus lactis]; contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 1 1 11 25 At3g02570 phosphomannose isomerase type I family protein contains Pfam profile: PF01238 phosphomannose isomerase type I 1 1 12 1 At3g02630 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Sesamum indicum GI:575942, Cucumis sativus SP|P32061, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 1 1 12 2 At3g02810 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 12 3 At3g02860 expressed protein 1 1 12 4 At3g03020 expressed protein 1 1 12 5 At3g03080 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar to allyl alcohol dehydrogenase [Nicotiana tabacum] GI:6692816" 1 1 12 6 At3g05675 expressed protein 1 1 12 7 At3g05710 "syntaxin, putative similar to syntaxin of plants 42 [Arabidopsis thaliana] GI:5059352" 1 1 12 8 At3g05870 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 1 12 9 At3g05930 germin-like protein (GLP8) identical to germin-like protein subfamily 2 member 3 SP|P93000 [PMID:9869400]; contains Pfam profile: PF01072 germin family 1 1 12 10 At3g06050 "alkyl hydroperoxide reductase/thiol specific antioxidant (AhpC/TSA)/mal allergen family protein identical to SP|Q9M7T0 Putative peroxiredoxin, mitochondrial precursor {Arabidopsis thaliana}; similar to thioredoxin peroxidase [Capsicum annuum] GI:18654477; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 1 1 12 11 At3g06090 hypothetical protein 1 1 12 12 At3g06240 F-box family protein contains F-box domain Pfam:PF00646 1 1 12 13 At3g06300 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 1 12 14 At3g09230 myb family transcription factor identical to transforming protein (myb) homolog GB:S22520 [Arabidopsis thaliana] 1 1 12 15 At3g09290 "zinc finger (C2H2 type) family protein ; contains Pfam profile: PF00096 Zinc finger, C2H2 type" 1 1 12 16 At3g09470 expressed protein 1 1 12 17 At3g09520 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 1 1 12 18 At3g09710 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 1 1 12 19 At3g09760 "zinc finger (C3HC4-type RING finger) family protein ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 12 20 At3g09900 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:871510 from [Pisum sativum]; contains Pfam profile: PF00071 Ras family" 1 1 12 21 At3g09940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase (NADH) GB:JU0182 (Cucumis sativus)" 1 1 12 22 At3g12340 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative contains Pfam profile: PF00254, FKBP-type peptidyl-prolyl cis-trans isomerases" 1 1 12 23 At3g12380 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin 1 1 12 24 At3g12550 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 1 1 12 25 At3g12610 "DNA-damage-repair/toleration protein, putative (DRT100) similar to DNA-damage-repair/toleration protein DRT100 [Precursor] SWISS-PROT:Q00874, NCBI_gi:5701788; contains multiple LRR repeats Pfam profile: PF00560" 1 1 13 1 At3g12770 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 13 2 At3g12830 auxin-responsive family protein similar to auxin-induced protein (SP:P33082) [Glycine max] 1 1 13 3 At3g13000 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 1 1 13 4 At3g13050 "transporter-related low similarity to apical organic cation transporter [Sus scrofa] GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2) {Rattus norvegicus}; contains Pfam profile PF00083: major facilitator superfamily protein" 1 1 13 5 At3g15355 ubiquitin-conjugating enzyme-related similar to ubiquitin-conjugating enzyme (GI:3319990) [Mus musculus]; similar to Baculoviral IAP repeat-containing protein 6 (Ubiquitin-conjugating BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo sapiens]; 1 1 13 6 At3g15395 expressed protein 1 1 13 7 At3g15550 expressed protein ; expression supported by MPSS 1 1 13 8 At3g15605 hypothetical protein 1 1 13 9 At3g15760 expressed protein 1 1 13 10 At3g15820 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 1 1 13 11 At3g15980 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]" 1 1 13 12 At3g16020 hypothetical protein 1 1 13 13 At3g18680 aspartate/glutamate/uridylate kinase family protein similar to UMP-kinase GB:CAB38122 gi:4468612 from [Lactococcus lactis] ; contains Pfam profile PF00696: Amino acid kinase family 1 1 13 14 At3g18740 60S ribosomal protein L30 (RPL30C) similar to 60S RIBOSOMAL PROTEIN L30 GB:O49884 from [Lupinus luteus] 1 1 13 15 At3g18870 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 1 13 16 At3g18930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 1 1 13 17 At3g19085 hypothetical protein 1 1 13 18 At3g19150 kip-related protein 6 (KRP6) / cyclin-dependent kinase inhibitor 6 (ICK6) identical to cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis thaliana] GI:14422295 1 1 13 19 At3g19310 expressed protein similar to GB:CAB16796 from [Arabidopsis thaliana] 1 1 13 20 At3g19360 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 1 13 21 At3g22060 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069 1 1 13 22 At3g22110 "20S proteasome alpha subunit C (PAC1) (PRC9) identical to GB:AAC32057 from [Arabidopsis thaliana] (Genetics (1998) 149 (2), 677-692); identical to cDNA proteasome subunit prc9 GI:2511583" 1 1 13 23 At3g22270 expressed protein 1 1 13 24 At3g22350 "F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 1 1 13 25 At3g22460 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative nearly identical over 185 amino acids to SP|P47998 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}" 1 1 14 1 At3g22500 late embryogenesis abundant protein (ECP31) / LEA protein identical to LEA protein in group 5 (AtECP31) [Arabidopsis thaliana] GI:1526422; contains Pfam profile PF04927: Seed maturation protein 1 1 14 2 At3g22690 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 14 3 At3g22750 "protein kinase, putative similar to protein kinase ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 1 1 14 4 At3g25660 "glutamyl-tRNA(Gln) amidotransferase, putative similar to SP|O06491 Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) {Bacillus subtilis}; contains Pfam profile PF01425: Amidase" 1 1 14 5 At3g25717 expressed protein 1 1 14 6 At3g25860 dihydrolipoamide S-acetyltransferase (LTA2) identical to dihydrolipoamide S-acetyltransferase (LTA2) [Arabidopsis thaliana] GI:5881963 1 1 14 7 At3g25900 homocysteine S-methyltransferase 1 (HMT-1) identical to GB:AAF23821 from [Arabidopsis thaliana] 1 1 14 8 At3g26060 "peroxiredoxin Q, putative similar to peroxiredoxin Q [Sedum lineare] GI:6899842; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 1 1 14 9 At3g26110 expressed protein 1 1 14 10 At3g26235 hypothetical protein 1 1 14 11 At3g26290 "cytochrome P450 71B26, putative (CYP71B26) identical to cytochrome P450 71B26 (SP:Q9LTL0) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 1 1 14 12 At3g29020 myb family transcription factor (MYB110) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 14 13 At3g29050 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 1 1 14 14 At3g29185 expressed protein 1 1 14 15 At3g29240 "expressed protein similar to At1g33780 [Arabidopsis thaliana]; contains Pfam profile PF02622: Uncharacterized ACR, COG1678" 1 1 14 16 At3g29360 "UDP-glucose 6-dehydrogenase, putative very strong similarity to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain" 1 1 14 17 At3g29400 exocyst subunit EXO70 family protein similar to EXO70 protein (GI:2352998) [Mus musculus]; contains Pfam domain PF03081: Exo70 exocyst complex subunit 1 1 14 18 At3g29660 hypothetical protein 1 1 14 19 At3g29720 "transferase-related low similarity to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234" 1 1 14 20 At3g43770 hypothetical protein 1 1 14 21 At3g43840 expressed protein 1 1 14 22 At3g44040 expressed protein 1 1 14 23 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 1 1 14 24 At3g44240 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 1 1 14 25 At3g44310 nitrilase 1 (NIT1) identical to SP|P32961 Nitrilase 1 (EC 3.5.5.1) {Arabidopsis thaliana} 1 1 15 1 At3g44520 esterase/lipase/thioesterase family protein similar to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}; contains Interpro entry IPR000379 1 1 15 2 At3g44580 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 1 15 3 At3g47450 expressed protein 1 1 15 4 At3g47490 HNH endonuclease domain-containing protein contains Pfam domain PF01844: HNH endonuclease 1 1 15 5 At3g47630 expressed protein 1 1 15 6 At3g47680 expressed protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 1 1 15 7 At3g47836 expressed protein 1 1 15 8 At3g47900 ubiquitin carboxyl-terminal hydrolase family protein contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 1 1 15 9 At3g48060 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 1 1 15 10 At3g48120 expressed protein 1 1 15 11 At3g51010 expressed protein 1 1 15 12 At3g51060 "zinc finger protein, putative / lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702)" 1 1 15 13 At3g51230 hypothetical protein 1 1 15 14 At3g51290 proline-rich family protein 1 1 15 15 At3g51450 "strictosidine synthase family protein similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]" 1 1 15 16 At3g51510 expressed protein 1 1 15 17 At3g51670 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh2p (GI:2739046) {Glycine max};; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 1 1 15 18 At3g51730 "saposin B domain-containing protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 1 1 15 19 At3g54200 "expressed protein hin1 protein, Nicotiana tabacum, PIR:T03265" 1 1 15 20 At3g54260 "expressed protein various predicted proteins, Arabidopsis thaliana" 1 1 15 21 At3g54430 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 1 1 15 22 At3g54480 SKP1 interacting partner 5 (SKIP5) identical to GP:14348816 SKP1-interacting partner 5 {Arabidopsis thaliana} 1 1 15 23 At3g54640 "tryptophan synthase, alpha subunit (TSA1) identical to gi:619753" 1 1 15 24 At3g54700 "phosphate transporter, putative strong similarity to phosphate transporter (AtPT2) [Arabidopsis thaliana] GI:1502430" 1 1 15 25 At3g54870 "armadillo/beta-catenin repeat family protein / kinesin motor family protein kinesin, Syncephalastrum racemosum, AJ225894" 1 1 16 1 At3g54900 "CAX-interacting protein 1 (CAXIP1) identical to cDNA CAXIP1 protein (CAXIP1) GI:27752304, CAXIP1 protein [Arabidopsis thaliana] GI:27752305" 1 1 16 2 At3g57700 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 1 16 3 At3g57760 protein kinase family protein contains similarity to protein kinases 1 1 16 4 At3g57910 D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain 1 1 16 5 At3g57970 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 1 1 16 6 At3g58160 "myosin heavy chain, putative similar to myosin heavy chain [Arabidopsis thaliana] gi|602328|emb|CAA84067." 1 1 16 7 At3g58220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 16 8 At3g58400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam PF00917: MATH domain 1 1 16 9 At3g58450 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 1 1 16 10 At3g61180 "zinc finger (C3HC4-type RING finger) family protein low similarity to RNF6 protein [Mus musculus] GI:20530241; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 16 11 At3g61240 "DEAD/DEAH box helicase, putative (RH12) identical to cDNA DEAD box RNA helicase, RH12 GI:3776000" 1 1 16 12 At3g61390 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana 1 1 16 13 At3g61440 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative identical to cysteine synthase (EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 1 1 16 14 At3g61600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 1 1 16 15 At3g61660 hypothetical protein 1 1 16 16 At3g61820 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 1 16 17 At3g61870 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803), PIR:S75899" 1 1 16 18 At4g00810 60S acidic ribosomal protein P1 (RPP1B) similar to acidic ribosomal protein p1 1 1 16 19 At4g00860 stress-related ozone-induced protein (OZI1) / stress-related ozone-responsive protein identical to stress-related ozone-induced protein AtOZI1 (mRNA corresponding to this gene accumulates in response to ozone stress and pathogen (bacterial) infection); putative pathogenesis-related protein (GI:790583) [Arabidopsis thaliana] 1 1 16 20 At4g01010 "cyclic nucleotide-regulated ion channel, putative (CNGC13) similar to CaM-regulated potassium ion channel (ACBK1) GI:8515883 from [Arabidopsis thaliana]" 1 1 16 21 At4g01050 hydroxyproline-rich glycoprotein family protein 1 1 16 22 At4g01220 expressed protein 1 1 16 23 At4g01245 hypothetical protein 1 1 16 24 At4g01430 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 1 1 16 25 At4g01460 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 17 1 At4g04260 bromo-adjacent homology (BAH) domain-containing protein similar to ES43 [Hordeum vulgare] GI:1345528; contains Pfam profile PF01426: BAH domain 1 1 17 2 At4g04360 hypothetical protein 1 1 17 3 At4g04530 "Ulp1 protease family protein (snoR29) contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; snoR29 gene for small nucleolar RNA GI:15706258" 1 1 17 4 At4g04620 "autophagy 8b (APG8b) identical to autophagy 8b [Arabidopsis thaliana] GI:19912153; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 1 1 17 5 At4g04770 ATP-binding-cassette transporter (ABC1) Identical to the protein described in PMID:11156608 and note that sequence was not deposited into GenBank by the authors. 1 1 17 6 At4g04830 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 1 1 17 7 At4g04980 "hydroxyproline-rich glycoprotein family protein Common family members: At4g18570, At3g25690, At5g61090 [Arabidopsis thaliana]" 1 1 17 8 At4g05010 F-box family protein contains Pfam PF00646: F-box domain; similar to late embryogenesis abundant protein (GI:1350541) (PIR|T09287) {Picea glauca} 1 1 17 9 At4g09740 "glycosyl hydrolase family 9 protein similar to endo-beta-1,4-glucanase; cellulase GI:1655543 from [Capsicum annuum]" 1 1 17 10 At4g09780 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 17 11 At4g09960 MADS-box protein (AGL11) 1 1 17 12 At4g09980 "methyltransferase MT-A70 family protein low similarity to SP|P25583 Karyogamy protein KAR4 {Saccharomyces cerevisiae}, (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase))" 1 1 17 13 At4g10140 expressed protein 1 1 17 14 At4g10180 light-mediated development protein 1 / deetiolated1 (DET1) identical to Light-mediated development protein DET1 (Deetiolated1) (Swiss-Prot:P48732) [Arabidopsis thaliana] 1 1 17 15 At4g10350 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; nap gene, Arabidopsis thaliana, gb:AJ222713" 1 1 17 16 At4g10410 hypothetical protein 1 1 17 17 At4g13220 expressed protein 1 1 17 18 At4g13261 hypothetical protein 1 1 17 19 At4g13380 heavy-metal-associated domain-containing protein low similarity to wound-responsive gene KED [Nicotiana tabacum] GI:8096269; contains Pfam profile PF00403: Heavy-metal-associated domain 1 1 17 20 At4g13440 "calcium-binding EF hand family protein low similarity to Polcalcin (Calcium-binding pollen allergen) from {Phleum pratense} SP|O82040, {Cynodon dactylon} SP|P94092; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 1 1 17 21 At4g13600 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 1 17 22 At4g13650 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 17 23 At4g13810 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 1 1 17 24 At4g13850 glycine-rich RNA-binding protein (GRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabidopsis thaliana] GI:2826811 1 1 17 25 At4g16195 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 1 1 18 1 At4g16240 hypothetical protein 1 1 18 2 At4g16410 expressed protein contains Pfam PF05421: Protein of unknown function (DUF751) 1 1 18 3 At4g16447 expressed protein 1 1 18 4 At4g16570 protein arginine N-methyltransferase-related contains weak similarity to protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Swiss-Prot:P55345) [Homo sapiens] 1 1 18 5 At4g16630 "DEAD/DEAH box helicase, putative (RH28) identical to cDNA DEAD box RNA helicase, RH28 GI:3776026" 1 1 18 6 At4g16750 "DRE-binding transcription factor, putative similar to DRE binding factor 2 [Zea mays] GI:21908034; contains Pfam profile PF00847: AP2 domain" 1 1 18 7 At4g16780 homeobox-leucine zipper protein 4 (HAT4) / HD-ZIP protein 4 SP|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4) (SP:Q05466) [Arabidopsis thaliana] (HD-ZIP homeotic protein Athb-2 1 1 18 8 At4g19330 "kelch repeat-containing F-box family protein very low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 1 18 9 At4g19390 expressed protein 1 1 18 10 At4g19550 expressed protein 1 1 18 11 At4g19610 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 1 18 12 At4g19750 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 1 1 18 13 At4g19830 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to 70 kDa peptidylprolyl isomerase (Peptidylprolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum aestivum]; FKBP-type peptidyl-prolyl cis-trans isomerase,Synechocystis sp., PIR2:S75144; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 1 1 18 14 At4g19985 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 1 1 18 15 At4g20020 expressed protein 1 1 18 16 At4g22830 expressed protein 1 1 18 17 At4g22890 expressed protein 1 1 18 18 At4g23040 UBX domain-containing protein similar to Ara4-interacting protein [Arabidopsis thaliana] GI:13160609; contains Pfam profile PF00789: UBX domain 1 1 18 19 At4g23100 glutamate-cysteine ligase / gamma-glutamylcysteine synthetase (GSH1) identical to glutamate-cysteine ligase SP:P46309 from [Arabidopsis thaliana]; contains Pfam profile: PF04107 glutamate-cysteine ligase family 2(GCS2) 1 1 18 20 At4g23250 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 1 1 18 21 At4g23300 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 1 18 22 At4g23470 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 1 18 23 At4g23500 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 1 1 18 24 At4g26080 protein phosphatase 2C ABI1 / PP2C ABI1 / abscisic acid-insensitive 1 (ABI1) nearly identical to SP|P49597 Protein phosphatase 2C ABI1 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 1) {Arabidopsis thaliana} 1 1 18 25 At4g26120 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 1 1 19 1 At4g26270 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 1 1 19 2 At4g26330 "subtilase family protein contains similarity to SBT1, a subtilase from tomato plants GI:1771160 from [Lycopersicon esculentum]" 1 1 19 3 At4g26480 "KH domain-containing protein qkI-7, Mus musculus" 1 1 19 4 At4g26520 "fructose-bisphosphate aldolase, cytoplasmic identical to SP|P22197 Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis thaliana}" 1 1 19 5 At4g26660 expressed protein weak similarity to phragmoplast-associated kinesin-related protein 1 [Arabidopsis thaliana] GI:8745333 1 1 19 6 At4g26710 ATP synthase subunit H family protein contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) [Homo sapiens] 1 1 19 7 At4g29290 hypothetical protein 1 1 19 8 At4g29360 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 1 19 9 At4g29520 expressed protein 1 1 19 10 At4g29580 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase homolog DesB [Arabidopsis thaliana] GI:4836444, cytidine deaminase 9 (CDA9) [Arabidopsis thaliana] GI:5080715; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 1 1 19 11 At4g29735 expressed protein contains Pfam domain PF05251: Uncharacterised protein family (UPF0197) 1 1 19 12 At4g29780 expressed protein 1 1 19 13 At4g29930 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 19 14 At4g29990 light repressible receptor protein kinase identical to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 1 1 19 15 At4g32490 plastocyanin-like domain-containing protein 1 1 19 16 At4g32551 "WD-40 repeat family protein (LEUNIG) contains seven G-protein beta WD-40 repeats; beta transducin-like protein, Podospora anserina, gb:L28125; contains Pfam profiles PF04503: Single-stranded DNA binding protein, SSDP; PF00400:WD domain, G-beta repeat; identical to cDNA LEUNIG (LEUNIG) GI:11141604" 1 1 19 17 At4g32680 expressed protein 1 1 19 18 At4g32760 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate HRS isoform 2 [Homo sapiens] GI:9022389; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 1 1 19 19 At4g32890 "zinc finger (GATA type) family protein GATA transcription factor 3, Arabidopsis thaliana, gb:Y13650" 1 1 19 20 At4g32920 glycine-rich protein 1 1 19 21 At4g33080 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 1 19 22 At4g33130 expressed protein weak similarity to Max-interacting transcriptional repressor [Mus musculus] GI:1184157 1 1 19 23 AT5G57480 PC-1 A12 1 1 19 24 3XSSC PC-1 A24 1 1 19 25 AT1G29930 PC-1 E12 1 1 20 1 3XSSC PC-1 E24 1 1 20 2 AT3G44150 PC-1 I12 1 1 20 3 3XSSC PC-1 I24 1 1 20 4 AT4G00810 PC-1 M12 1 1 20 5 3XSSC PC-1 M24 1 1 20 6 At4g35740 "DNA helicase (RECQl3) identical to DNA Helicase [Arabidopsis thaliana] GI:11121447; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 1 20 7 At4g35785 "transformer serine/arginine-rich ribonucleoprotein, putative similar to transformer-SR ribonucleoprotein [Nicotiana tabacum] gi|1781299|emb|CAA70700" 1 1 20 8 At4g35920 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; isoform contains AT-acceptor splice site at intron 8" 1 1 20 9 At4g35985 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 1 1 20 10 At4g36105 expressed protein 1 1 20 11 At4g36160 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 1 1 20 12 At4g36360 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 1 1 20 13 At4g36400 "FAD linked oxidase family protein low similarity to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 1 1 20 14 At4g39050 "kinesin-related protein (MKRP2) kinesin motor protein - Ustilago maydis, PID:g2062750; identical to cDNA MKRP2 mRNA for kinesin-related protein GI:16902293, kinesin-related protein [Arabidopsis thaliana] GI:16902294" 1 1 20 15 At4g39110 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 20 16 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 1 1 20 17 At4g39280 "phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative similar to SP|Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain) (PheRS) {Homo sapiens}; contains Pfam profile PF01409: tRNA synthetases class II core domain (F)" 1 1 20 18 At4g39410 WRKY family transcription factor identical to WRKY transcription factor 13 GI:15991729 from [Arabidopsis thaliana] 1 1 20 19 At4g39470 chloroplast lumen common family protein 1 1 20 20 At4g39630 expressed protein 1 1 20 21 At4g39680 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 1 1 20 22 At5g03190 expressed protein 1 1 20 23 At5g03250 "phototropic-responsive NPH3 family protein contains some similarity to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 1 1 20 24 At5g03420 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 1 1 20 25 At5g03450 zinc finger (C3HC4-type RING finger) family protein 1 1 21 1 At5g03600 GDSL-motif lipase/hydrolase family protein low similarity to family II lipase EXL3 [Arabidopsis thaliana] GI:15054386; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 1 1 21 2 At5g03660 expressed protein low similarity to outer surface protein F [Borrelia burgdorferi] GI:466482; contains Pfam profile PF04949: Family of unknown function (DUF662) 1 1 21 3 At5g03840 terminal flower 1 protein (TFL1) identical go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 1 1 21 4 At5g03900 "expressed protein predicted protein, Synechocystis sp., PIR:S74969" 1 1 21 5 At5g06490 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 21 6 At5g06530 ABC transporter family protein 1 1 21 7 At5g06710 homeobox-leucine zipper protein 14 (HAT14) / HD-ZIP protein 14 contains similarity to homeodomain leucine zipper protein 1 1 21 8 At5g06760 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein low similarity to SP|P46515 11 kDa late embryogenesis abundant protein (DS11) {Helianthus annuus}; contains Pfam profile PF03760: Late embryogenesis abundant (LEA) group 1 1 1 21 9 At5g06930 expressed protein 1 1 21 10 At5g06980 expressed protein 1 1 21 11 At5g07130 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 1 1 21 12 At5g07190 "embryo-specific protein 3, putative similar to embryo-specific protein 3 GI:3335171 from [Arabidopsis thaliana]" 1 1 21 13 At5g10290 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 1 1 21 14 At5g10350 "polyadenylate-binding protein family protein / PABP family protein contains weak similarity to poly(A) binding protein II from [Mus musculus] GI:2351846, [Xenopus laevis] GI:11527140; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 1 21 15 At5g10510 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 1 1 21 16 At5g10570 "basic helix-loop-helix (bHLH) family protein bHLH transcription factor, Arabidopsis thaliana, EMBL:AC005167" 1 1 21 17 At5g10710 expressed protein 1 1 21 18 At5g10750 expressed protein 1 1 21 19 At5g10930 CBL-interacting protein kinase 5 (CIPK5) identical to CBL-interacting protein kinase 5 GP|9280632|gb|AAF86504 [Arabidopsis thaliana] 1 1 21 20 At5g10990 auxin-responsive family protein similar to GP:10185818 auxin-induced protein TGSAUR21 {Tulipa gesneriana) 1 1 21 21 At5g14105 expressed protein 1 1 21 22 At5g14160 F-box family protein contains F-box domain Pfam:PF00646 1 1 21 23 At5g14340 myb family transcription factor (MYB40) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 21 24 At5g14400 cytochrome P450 family protein similar to steroid 22-alpha-hydroxylase; DWF4; CYP90B1 (GI:2935342) [Arabidopsis thaliana] 1 1 21 25 At5g14560 expressed protein 1 1 22 1 At5g14600 expressed protein 1 1 22 2 At5g14780 formate dehydrogenase (FDH) identical to GI:7677266 1 1 22 3 At5g14850 "mannosyltransferase, putative similar to PIGB from Homo sapiens [gi:1552169], Mus musculus [gi:7634741]" 1 1 22 4 At5g17530 phosphoglucosamine mutase family protein low similarity to phosphoglucomutase/phosphomannomutase [Sphingomonas paucimobilis] GI:6103619; contains InterPro accession IPR006352: Phosphoglucosamine mutase 1 1 22 5 At5g17580 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 22 6 At5g17740 "AAA-type ATPase family protein h-bcs1, Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849 contains Pfam profile: ATPase family PF00004 gene_id:K17E7.100 contains Pfam profile: ATPase family PF00004" 1 1 22 7 At5g17780 "hydrolase, alpha/beta fold family protein low similarity to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}, SP|P27747|ACOC_ALCEU Dihydrolipoamide acetyltransferase component of acetoin cleaving system (EC 2.3.1.12) [Ralstonia eutropha] {Alcaligenes eutrophus}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 22 8 At5g17970 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 22 9 At5g18030 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 1 1 22 10 At5g18180 Gar1 RNA-binding region family protein contains Pfam profile PF04410: Gar1 protein RNA binding region 1 1 22 11 At5g18240 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 22 12 At5g20810 "auxin-responsive protein, putative / small auxin up RNA (SAUR_B) similar to indole-3-acetic acid induced protein ARG7 SP:P32295 from [Phaseolus aureus]" 1 1 22 13 At5g20870 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 [Nicotiana tabacum] 1 1 22 14 At5g21020 expressed protein 1 1 22 15 At5g21080 expressed protein predicted proteins - Arabidopsis thaliana; expression supported by MPSS 1 1 22 16 At5g21910 expressed protein ; expression supported by MPSS 1 1 22 17 At5g21970 expressed protein supported by full-length cDNA gi:22531216 from [Arabidopsis thaliana] 1 1 22 18 At5g22110 DNA polymerase epsilon subunit B family contains Pfam profile: PF04042 DNA polymerase epsilon subunit B 1 1 22 19 At5g22150 hypothetical protein 1 1 22 20 At5g24790 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 1 1 22 21 At5g24850 cryptochrome dash (CRYD) nearly identical to cryptochrome dash [Arabidopsis thaliana] GI:28971609; similar to Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)(SP:Q55081){Synechocystis sp.} 1 1 22 22 At5g25020 expressed protein 1 1 22 23 At5g25080 expressed protein 1 1 22 24 At5g25260 expressed protein 1 1 22 25 At5g25300 "F-box family protein PF0064: F-box domain; similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 1 1 23 1 At5g25440 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 23 2 At5g25475 expressed protein 1 1 23 3 At5g28470 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 1 23 4 At5g28510 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis thaliana] 1 1 23 5 At5g28680 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 23 6 At5g28760 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 1 1 23 7 At5g28910 expressed protein 1 1 23 8 At5g28970 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 1 23 9 At5g30495 expressed protein 1 1 23 10 At5g30500 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]" 1 1 23 11 At5g37480 expressed protein 1 1 23 12 At5g37520 "hypothetical protein predicted proteins, Arabidopsis thaliana" 1 1 23 13 At5g37710 "lipase class 3 family protein / calmodulin-binding heat-shock protein, putative similar to almodulin-binding heat-shock protein, common tobacco, PIR:T04107; contains Pfam profiles PF03893: Lipase 3 N-terminal region, PF01764: Lipase" 1 1 23 14 At5g37770 "touch-responsive protein / calmodulin-related protein 2, touch-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana]" 1 1 23 15 At5g37950 hypothetical protein 1 1 23 16 At5g38010 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 1 23 17 At5g38180 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 1 23 18 At5g38220 expressed protein 1 1 23 19 At5g41080 glycerophosphoryl diester phosphodiesterase family protein weak similarity to SP|P37965 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) {Bacillus subtilis}; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 1 1 23 20 At5g41120 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 1 1 23 21 At5g41310 kinesin motor protein-related 1 1 23 22 At5g41360 "DNA repair protein and transcription factor, putative (XPB2) similar to SP|P49135 TFIIH basal transcription factor complex helicase XPB subunit (EC 3.6.1.-) (Basic transcription factor 2 89 kDa subunit) {Mus musculus}; contains Pfam profile PF00271: Helicase conserved C-terminal domain; contains TIGRfam profile TIGR00603: DNA repair helicase rad25" 1 1 23 23 At5g41540 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 23 24 At5g41600 "reticulon family protein (RTNLB4) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251, SP|O95197 Reticulon protein 3 (Neuroendocrine-specific protein-like) {Homo sapiens}; contains Pfam profile PF02453: Reticulon" 1 1 23 25 At5g41740 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 24 1 At5g41790 COP1-interactive protein 1 / CIP1 almost identical to CIP1 (GI:836950) [Arabidopsis thaliana] 1 1 24 2 At5g44440 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 1 24 3 At5g44500 "small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|P27048 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Mus musculus}" 1 1 24 4 At5g44650 expressed protein 1 1 24 5 At5g44710 expressed protein similar to unknown protein (ref|NP_011731.1) 1 1 24 6 At5g44840 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Persea americana] GI:166951; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 1 1 24 7 At5g44910 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 1 24 8 At5g45060 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 24 9 At5g45100 expressed protein 1 1 24 10 At5g47635 expressed protein 1 1 24 11 At5g47690 expressed protein 1 1 24 12 At5g47830 expressed protein 1 1 24 13 At5g47890 "NADH-ubiquinone oxidoreductase B8 subunit, putative similar to SP|O43678 NADH-ubiquinone oxidoreductase B8 subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B8) (CI-B8) {Homo sapiens}; contains Pfam profile PF05047: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain" 1 1 24 14 At5g48070 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] " 1 1 24 15 At5g48130 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 24 16 At5g48300 glucose-1-phosphate adenylyltransferase small subunit 1 (APS1) / ADP-glucose pyrophosphorylase (ADG1) identical to SP|P55228 1 1 24 17 At5g48350 hypothetical protein 1 1 24 18 At5g51030 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 1 1 24 19 At5g51090 hypothetical protein 1 1 24 20 At5g51230 embryonic flower 2 (EMF2) identical to embryonic flower 2 [Arabidopsis thaliana] GI:14276050; supporting cDNA gi|14276049|dbj|AB053171.1| 1 1 24 21 At5g51280 "DEAD-box protein abstrakt, putative " 1 1 24 22 At5g51440 "23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) similar to heat shock 22 kDa protein, mitochondrial precursor SP:Q96331 from [Arabidopsis thaliana]; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 1 1 24 23 At5g51500 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 1 24 24 At5g51640 leaf senescence protein-related (YLS7 ) annotation temporarily based on supporting cDNA gi|13122291|dbj|AB047810.1|; identical to cDNA YLS7 leaf-senescence-related protein GI:13122291 1 1 24 25 At5g51700 RAR1 disease resistance protein (RAR1) Contains a 3 nt micro-exon at exon 2. 1 1 25 1 At5g54450 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 1 1 25 2 At5g54510 "auxin-responsive GH3 protein, putative (DFL-1) identical to auxin-responsive GH3 homologue [Arabidopsis thaliana] GI:11041726; similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter" 1 1 25 3 At5g54640 histone H2A identical to histone H2A Arabidopsis thaliana GI:7595337 1 1 25 4 At5g54700 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 1 1 25 5 At5g54850 expressed protein 1 1 25 6 At5g54900 "RNA-binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protein 5" 1 1 25 7 At5g55040 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 1 1 25 8 At5g55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam domain PF01805: Surp module 1 1 25 9 At5g57780 expressed protein similar to unknown protein (emb CAB79759.1) 1 1 25 10 At5g57820 hypothetical protein 1 1 25 11 At5g57960 GTP-binding family protein similar to SP|P25519 GTP-binding protein hflX {Escherichia coli} 1 1 25 12 At5g58010 "basic helix-loop-helix (bHLH) family protein bHLH transcription factor GBOF-1, Tulipa gesneriana, EMBL:AF185269; contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain" 1 1 25 13 At5g58180 SNARE protein-related similar to SNARE protein Ykt6 [Homo sapiens] GI:2507637 1 1 25 14 At5g58230 WD-40 repeat protein (MSI1) contains 6 WD-40 repeats (PF0400); identical to WD-40 repeat protein (SP:O22467) [Arabidopsis thaliana] 1 1 25 15 At5g58370 expressed protein 1 1 25 16 At5g58400 "peroxidase, putative similar to peroxidase [Nicotiana tabacum] gi|5381253|dbj|BAA82306" 1 1 25 17 At5g61000 "replication protein, putative similar to replication protein A1 [Oryza sativa] GI:2258469; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain" 1 1 25 18 At5g61050 histone deacetylase-related / HD-related 1 1 25 19 At5g61210 SNAP25 homologous protein SNAP33 (SNAP33) (SNAP33B) / synaptosomal-associated protein SNAP25-like 1 / snap25a identical to SNAP25 homologous protein SNAP33 (AtSNAP33) (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a) (Swiss-Prot:Q9S7P9) [Arabidopsis thaliana] 1 1 25 20 At5g61270 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 25 21 At5g61420 myb family transcription factor (MYB28) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 25 22 At5g61470 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 1 1 25 23 At5g61605 expressed protein 1 1 25 24 At5g61660 glycine-rich protein 1 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 1 1 26 1 At5g64400 "expressed protein contains Pfam domain, PF04933: Protein of unknown function (DUF657)" 1 1 26 2 At5g64540 hypothetical protein 1 1 26 3 At5g64590 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 1 1 26 4 At5g64720 hypothetical protein 1 1 26 5 At5g64780 expressed protein similar to unknown protein (pir||T04031) 1 1 26 6 At5g64910 expressed protein ; expression supported by MPSS 1 1 26 7 At5g64970 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 1 26 8 At5g67480 "TAZ zinc finger family protein / BTB/POZ domain-containing protein contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; simiar to Chain A, Taz2 Domain Of The Transcriptional Adaptor Protein Cbp (GI:11514507) [Homo sapiens]; similar to (SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo sapiens]; similar to histone acetyltransferase HAC4 (GI:21105785) [Arabidopsis thaliana]" 1 1 26 9 At5g67530 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 1 26 10 At1g47700 hypothetical protein 1 1 26 11 At2g24945 expressed protein 1 1 26 12 ath-MIR167d miRNA gene Arabidopsis thaliana miR167d stem-loop 1 1 26 13 ath-MIR156b miRNA gene Arabidopsis thaliana miR156b stem-loop 1 1 26 14 ath-MIR168a miRNA gene Arabidopsis thaliana miR168a stem-loop 1 1 26 15 ath-MIR171c miRNA gene Arabidopsis thaliana miR171c stem-loop 1 1 26 16 At3g43770 hypothetical protein 1 1 26 17 At3g43840 expressed protein 1 1 26 18 At3g44040 expressed protein 1 1 26 19 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 1 1 26 20 At3g44240 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 1 1 26 21 At3g44310 nitrilase 1 (NIT1) identical to SP|P32961 Nitrilase 1 (EC 3.5.5.1) {Arabidopsis thaliana} 1 1 26 22 At3g44520 esterase/lipase/thioesterase family protein similar to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}; contains Interpro entry IPR000379 1 1 26 23 At3g44580 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 1 26 24 Blank Blank 1 1 26 25 Blank Blank 1 2 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 1 2 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 2 1 5 atc07 Randomly generated negative control 1 2 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 1 2 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 1 8 atc03 Randomly generated negative control 1 2 1 9 At1g02740 MRG family protein member of Pfam PF05712: MRG; similar to Transcription factor-like protein MRG15 (MORF-related gene 15 protein) (MSL3-1 protein) (Protein HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens} 1 2 1 10 At1g02810 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 2 1 11 At1g02900 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 1 2 1 12 At1g02950 "glutathione S-transferase, putative similar to glutathione-S-transferase GI:169887 from [Silene vulgaris]" 1 2 1 13 At1g03055 expressed protein 1 2 1 14 At1g03100 pentatricopeptide (PPR) repeat-containing protein low similarity to CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat 1 2 1 15 At1g03260 expressed protein 1 2 1 16 At1g03320 hypothetical protein 1 2 1 17 At1g06000 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains similarity to UDPG glucosyltransferase GB:AAB62270 GI:2232354 from [Solanum berthaultii] 1 2 1 18 At1g06040 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger 1 2 1 19 At1g06170 basic helix-loop-helix (bHLH) family protein contains Pfam profile:PF00010 helix-loop-helix DNA-binding domain 1 2 1 20 At1g06225 Clavata3 / ESR-Related-3 (CLE3) CLAVATA3/ESR-Related 3 (CLE3) 1 2 1 21 At1g06410 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 1 2 1 22 At1g06470 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 1 2 1 23 At1g06640 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 1 2 1 24 At1g06690 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 1 2 1 25 At1g09190 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 2 1 At1g09245 expressed protein 1 2 2 2 At1g09410 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 2 3 At1g09460 "glucan endo-1,3-beta-glucosidase-related similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 1 2 2 4 At1g09600 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 2 2 5 At1g09650 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 2 2 6 At1g09800 tRNA pseudouridine synthase family protein contains Pfam profile PF01416: tRNA pseudouridine synthase 1 2 2 7 At1g09840 shaggy-related protein kinase kappa / ASK-kappa (ASK10) identical to shaggy-related protein kinase kappa SP:Q39019 GI:717180 from [Arabidopsis thaliana] 1 2 2 8 At1g12420 ACT domain-containing protein (ACR8) contains Pfam ACT domain PF01842 1 2 2 9 At1g12460 "leucine-rich repeat transmembrane protein kinase, putative " 1 2 2 10 At1g12660 hypothetical protein 1 2 2 11 At1g12730 cell division cycle protein-related contains 10 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 1 2 2 12 At1g12880 MutT/nudix family protein similar to diphosphoinositol polyphosphate phosphohydrolase [Homo sapiens] GI:3978224; contains Pfam profile PF00293: NUDIX domain 1 2 2 13 At1g12940 "high-affinity nitrate transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 1 2 2 14 At1g13120 expressed protein contains Prosite PS00012: Phosphopantetheine attachment site; similar to GLE1 (GI:3288817) {Homo sapiens}; EST gb|N37870 comes from this gene 1 2 2 15 At1g13180 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin 1 2 2 16 At1g15825 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 2 17 At1g15880 Golgi SNARE 11 protein identical to Golgi SNARE 11 protein (GI:13898893) {Arabidopsis thaliana}; similar to putative cis-Golgi SNARE protein GI:2583133 from [Arabidopsis thaliana];similar toSP|O95249| 28 kDa Golgi SNARE protein (28 kDa cis-Golgi SNARE p28) (GOS-28). [Homo sapiens]; similar to Golgi SNARE protein (Golgi SNAP receptor complex member 1) (28 kDa cis-Golgi SNARE p28) (GOS-28) (SP:Q62931) {Rattus norvegicus} 1 2 2 18 At1g16025 hypothetical protein 1 2 2 19 At1g16070 tubby family protein similar to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:Q9Z273) [Mus musculus]; low similarity to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:O0029) {Homo sapiens}; similar to phosphodiesterase (GI:467578) [Mus musculus]; contains Pfam profile PF01167: Tub family 1 2 2 20 At1g16260 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 2 2 21 At1g16320 "expressed protein ESTs gb|T76348, gb|N65615 and gb|Z18119 come from this gene" 1 2 2 22 At1g16480 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 2 23 At1g16530 LOB domain protein 3 / lateral organ boundaries domain protein 3 (LBD3) identical to SP|Q9SA51 LOB domain protein 3 {Arabidopsis thaliana}; identical to ASYMMETRIC LEAVES2-like protein 9 [Arabidopsis thaliana] GI:19918989 1 2 2 24 At1g19330 expressed protein 1 2 2 25 At1g19390 "wall-associated kinase, putative similar to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol. Biol. 39 (6), 1189-1196 (1999))" 1 2 3 1 At1g19540 "isoflavone reductase, putative similar to SP|P52577; contains isoflavone reductase domain PF02716" 1 2 3 2 At1g19620 expressed protein 1 2 3 3 At1g19800 expressed protein contains Pfam PF02405: Domain of unknown function DUF140; similar to TOLUENE TOLERANCE PROTEIN TTG2B {Brucella melitensis 16M} (GI:17982923) 1 2 3 4 At1g19870 calmodulin-binding family protein contains Pfam profile: PF00612 IQ calmodulin-binding motif 1 2 3 5 At1g20060 kinesin motor protein-related 1 2 3 6 At1g20120 "family II extracellular lipase, putative similar to family II lipase EXL3 GI:15054386, SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 2 3 7 At1g22890 expressed protein 1 2 3 8 At1g22920 "COP9 signalosome subunit 5B / CSN subunit 5B (CSN5B) / c-JUN coactivator protein AJH1, putative (AJH1) COP9 complex subunit CSN5-1; identical to Arabidopsis homologs of a c-Jun coactivator AJH1 GI:3641314 from [Arabidopsis thaliana]; identical to cDNA CSN complex subunit 5B (CSN5B) GI:18056662; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 1 2 3 9 At1g23060 expressed protein Location of EST gb|T22158 and gb|AA395675 1 2 3 10 At1g23100 "10 kDa chaperonin, putative similar to 10 kDa chaperonin SP:P34893 from [Arabidopsis thaliana]" 1 2 3 11 At1g23250 "caleosin-related similar to calcium-binding RD20 protein [Arabidopsis thaliana] GI:10862968, caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]" 1 2 3 12 At1g23310 "glutamate:glyoxylate aminotransferase 1 (GGT1) identical to glutamate:glyoxylate aminotransferase 1 [Arabidopsis thaliana] GI:24461827; similar to alanine aminotransferase GI:4730884 from [Oryza sativa]; contains Pfam profile PF00155: aminotransferase, classes I and II" 1 2 3 13 At1g23450 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 3 14 At1g23500 "GDSL-motif lipase, putative similar to family II lipase EXL6 (GI:15054390), EXL4 (GI:15054388) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 1 2 3 15 At1g27190 "leucine-rich repeat transmembrane protein kinase, putative similar to CLV1 receptor kinase GB:AAB58929 GI:2160756 from [Arabidopsis thaliana]" 1 2 3 16 At1g27260 paired amphipathic helix repeat-containing protein low similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 1 2 3 17 At1g27390 mitochondrial import receptor subunit TOM20-2 (TOM20-2) identical to mitochondrial import receptor subunit TOM20-2 SP:P82873 from [Arabidopsis thaliana] 1 2 3 18 At1g27440 exostosin family protein contains Pfam profile: PF03016 exostosin family 1 2 3 19 At1g27595 expressed protein similar to Symplekin (SP:Q92797) {Homo sapiens} 1 2 3 20 At1g27640 expressed protein 1 2 3 21 At1g27790 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730" 1 2 3 22 At1g27860 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 1 2 3 23 At1g30790 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 2 3 24 At1g30835 expressed protein 1 2 3 25 At1g31020 "thioredoxin o (TRXO2) similar to thioredoxin 2 from Saccharomyces cerevisiae GI:173050, 3'-end of protein contains similarity to thioredoxins; contains Pfam profile: PF00085 Thioredoxin; identical to cDNA thioredoxin o (TRXO2) GI:15081458" 1 2 4 1 At1g31080 F-box family protein contains Pfam profile: PF00646 F-box domain 1 2 4 2 At1g31270 hypothetical protein 1 2 4 3 At1g31330 photosystem I reaction center subunit III family protein contains Pfam profile: PF02507: photosystem I reaction center subunit III 1 2 4 4 At1g31500 endonuclease/exonuclease/phosphatase family protein low similarity to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 4 5 At1g31550 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 4 6 At1g34590 hypothetical protein 1 2 4 7 At1g34710 "hypothetical protein similar to At3g43370, At2g14780, At1g27810, At3g42760, At1g25784, At4g08890" 1 2 4 8 At1g35140 "phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region" 1 2 4 9 At1g35190 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to hyoscyamine 6-dioxygenase hydroxylase from Hyoscyamus niger [GB:P24397][SP|P24397], Atropa belladona [gi:4996123]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 1 2 4 10 At1g35420 dienelactone hydrolase family protein low similarity to dienelactone hydrolase [Rhodococcus opacus] GI:23094407; contains Pfam profile PF01738: Dienelactone hydrolase family 1 2 4 11 At1g35500 hypothetical protein 1 2 4 12 At1g35650 "Ulp1 protease family protein PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g21020, At3g26530, At1g08760, At1g08740, At2g29240" 1 2 4 13 At1g35720 annexin 1 (ANN1) identical to annexin (AnnAt1) [Arabidopsis thaliana] GI:4959106 1 2 4 14 At1g47340 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 15 At1g47400 expressed protein 1 2 4 16 At1g47570 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger)" 1 2 4 17 At1g47640 expressed protein similar to seven transmembrane domain protein GI:3550427 from [Homo sapiens] 1 2 4 18 At1g47800 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 19 At1g47830 "clathrin coat assembly protein, putative similar to clathrin coat assembly protein AP17 GB:CAA65533 GI:2959358 from [Zea mays]; contains Pfam profile: PF01217 clathrin adaptor complex small chain" 1 2 4 20 At1g48040 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase-2C GB:AAC36698 GI:3643085 from [Mesembryanthemum crystallinum] 1 2 4 21 At1g48095 hypothetical protein 1 2 4 22 At1g51130 expressed protein similar to unknown protein GI:9294403 from [Arabidopsis thaliana] 1 2 4 23 At1g51200 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 1 2 4 24 At1g51370 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 25 At1g51405 "myosin-related low similarity to nonmuscle myosin heavy chain from Gallus gallus [GI:212449], Xenopus laevis [GI:214624], Homo sapiens [GI:641958]" 1 2 5 1 At1g51560 expressed protein 1 2 5 2 At1g51600 zinc finger (GATA type) family protein contains similarity to zinc-finger protein ZIM [Arabidopsis thaliana] gi|8918533|dbj|BAA97679; contains Pfam PF00320: GATA zinc finger 1 2 5 3 At1g51740 "syntaxin 81 (SYP81) identical to SP|P59277 Syntaxin 81 (AtSYP81) {Arabidopsis thaliana}; identified as syntaxin SYP81 by Sanderfoot, A.A., et al in Plant Physiol. 124:1558-69 (2000); similar to Syntaxin 18 (SP:Q9P2W9){Homo sapiens}" 1 2 5 4 At1g51800 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 1 2 5 5 At1g54410 "dehydrin family protein contains Pfam domain, PF00257: Dehydrin" 1 2 5 6 At1g54470 hypothetical protein 1 2 5 7 At1g54650 expressed protein similar to Actin-binding protein ABP140 (Swiss-Prot:Q08641) [Saccharomyces cerevisiae] 1 2 5 8 At1g54730 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 1 2 5 9 At1g54870 short-chain dehydrogenase/reductase (SDR) family protein C-terminal similar to dormancy related protein GI:1220178 from [Trollius ledebourii] 1 2 5 10 At1g54926 hypothetical protein 1 2 5 11 At1g55090 "carbon-nitrogen hydrolase family protein low similarity to SP|P71911 Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) {Mycobacterium tuberculosis}; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 1 2 5 12 At1g55160 expressed protein 1 2 5 13 At1g59640 basic helix-loop-helix (bHLH) family protein 1 2 5 14 At1g59690 hypothetical protein 1 2 5 15 At1g59835 hypothetical protein 1 2 5 16 At1g59865 expressed protein 1 2 5 17 At1g60010 expressed protein 1 2 5 18 At1g60080 "3' exoribonuclease family domain 1-containing protein similar to SP|Q96B26 Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA processing protein 43) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 1 2 5 19 At1g60340 apical meristem formation protein-related contains similarity to CUC1 [Arabidopsis thaliana] gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida] gi|1279640|emb|CAA63101 1 2 5 20 At1g60400 F-box family protein contains F-box domain Pfam:PF00646 1 2 5 21 At1g63250 "DEAD box RNA helicase, putative similar to RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 2 5 22 At1g63290 "ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family" 1 2 5 23 At1g63470 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 1 2 5 24 At1g63540 hydroxyproline-rich glycoprotein family protein 1 2 5 25 At1g63680 "Mur ligase family protein contains Pfam profile: PF01225 Mur ligase family, catalytic domain" 1 2 6 1 At1g63720 expressed protein similar to putative protein GB:CAA18164 [Arabidopsis thaliana] 1 2 6 2 At1g63855 expressed protein 1 2 6 3 At1g63940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase GB:AAD28178 [Brassica juncea]" 1 2 6 4 At1g66720 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 1 2 6 5 At1g66760 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 1 2 6 6 At1g66940 protein kinase-related 1 2 6 7 At1g66980 "protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein similar to leaf rust resistance kinase Lr10 GI:1680685 from [Triticum aestivum]; contains Pfam profiles PF03009: Glycerophosphoryl diester phosphodiesterase family, PF00069: Protein kinase domain" 1 2 6 8 At1g67140 expressed protein 1 2 6 9 At1g67210 "proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein contains Pfam domains PF00098: Zinc knuckle, PF04046: PSP" 1 2 6 10 At1g67370 "meiotic asynaptic mutant 1 (ASY1) identical to meiotic asynaptic mutant 1 [Arabidopsis thaliana] GI:7939627; contains Pfam profiles PF02301: DNA-binding HORMA domain, PF04433: SWIRM domain" 1 2 6 11 At1g67440 "expressed protein contains Pfam domain PF03193: Protein of unknown function, DUF258" 1 2 6 12 At1g70090 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 1 2 6 13 At1g70130 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733" 1 2 6 14 At1g70300 "potassium transporter, putative similar to potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 1 2 6 15 At1g70360 F-box protein-related 1 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 1 2 6 17 At1g70540 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 1 2 6 18 At1g70690 kinase-related contains Pfam PF01657:Domain of unknown function; similar to receptor-like protein kinase 4 GI:13506745 [Arabidopsis thaliana] 1 2 6 19 At1g70750 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593; supporting cDNA gi|4101563|gb|AF004556.1|AF004556" 1 2 6 20 At1g73600 "phosphoethanolamine N-methyltransferase 3, putative (NMT3) strong similarity to SP|Q9FR44 Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to SP|Q9C6B9 Putative phosphoethanolamine N-methyltransferase 3 {Arabidopsis thaliana}" 1 2 6 21 At1g73640 Ras-related GTP-binding family protein contains Pfam profile: PF00071 ras family Pfam profile: PF00071 Ras family 1 2 6 22 At1g73780 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 2 6 23 At1g73830 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 2 6 24 At1g73990 peptidase U7 family protein similar to protease IV GB:AAA57008 from [Escherichia coli]; contains Pfam profile PF01343: Peptidase family U7 1 2 6 25 At1g74045 hypothetical protein 1 2 7 1 At1g74210 glycerophosphoryl diester phosphodiesterase family protein low similarity to glycerophosphodiester phosphodiesterase [Borrelia hermsii] GI:1399038; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 1 2 7 2 At1g74270 60S ribosomal protein L35a (RPL35aC) similar to ribosomal protein L33B GB:NP_014877 from [Saccharomyces cerevisiae] 1 2 7 3 AT5G57480 PC-1 B12 1 2 7 4 3XSSC PC-1 B24 1 2 7 5 AT1G29930 PC-1 F12 1 2 7 6 3XSSC PC-1 F24 1 2 7 7 AT3G44150 PC-1 J12 1 2 7 8 3XSSC PC-1 J24 1 2 7 9 AT4G00810 PC-1 N12 1 2 7 10 3XSSC PC-1 N24 1 2 7 11 At1g77060 mutase family protein similar to carboxyvinyl-carboxyphosphonate phosphorylmutase GB:O49290 from [Arabidopsis thaliana]; similar to carboxyphosphonoenolpyruvate mutase (GI:47149) [Streptomyces hygroscopicus]; contains Prosite PS00161: Isocitrate lyase signature 1 2 7 12 At1g77090 thylakoid lumenal 29.8 kDa protein identical to SP|O49292|TL30_ARATH (Arabidopsis thaliana);contains a PsbP domain AF370571; SIMILAR TO GI:13926195--F22K20.16 1 2 7 13 At1g77260 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 1 2 7 14 At1g77320 BRCT domain-containing protein contains Pfam profile PF00533: BRCA1 C Terminus (BRCT) domain 1 2 7 15 At1g77480 "nucellin protein, putative similar to nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare] (nucellin: similar to aspartic protease and its specific expression in nucellar cells during degeneration)" 1 2 7 16 At1g77540 expressed protein similar to GB:AAD41433 1 2 7 17 At1g77720 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 7 18 At1g77770 expressed protein 1 2 7 19 At1g80320 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 2 7 20 At1g80380 phosphoribulokinase/uridine kinase-related 1 2 7 21 At1g80530 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 1 2 7 22 At1g80590 WRKY family transcription factor similar to zinc finger transcription factor WRKY1 GB:AAF23898 from (Oryza sativa) 1 2 7 23 At1g80770 expressed protein 1 2 7 24 At1g80830 "NRAMP metal ion transporter 1 (NRAMP1) identical to NRAMP1 protein [Arabidopsis thaliana] gi|7108911|gb|AAF36535; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 1 2 7 25 At1g80960 F-box protein-related contains weak hit to Pfam PF00646: F-box domain 1 2 8 1 At2g01060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 2 8 2 At2g04025 expressed protein 1 2 8 3 At2g04039 expressed protein 1 2 8 4 At2g04235 "expressed protein weak similarity to neurofilament protein (GI:161292) [Loligo pealei]; weak similarity to Glucoamylase S1/S2 precursor (EC 3.2.1.3) (Glucan 1,4-alpha- glucosidase) (1,4-alpha-D-glucan glucohydrolase) (Swiss-Prot:P08640) [Saccharomyces cerevisiae]" 1 2 8 5 At2g04305 magnesium transporter CorA-like protein-related 1 2 8 6 At2g04495 expressed protein 1 2 8 7 At2g04550 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 1 2 8 8 At2g04780 fasciclin-like arabinogalactan-protein (FLA7) identical to gi_13377782_gb_AAK20860 1 2 8 9 At2g04830 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; confirmed by FLcDNA GI:16604421; contains uncharacterized Arabidoppsis domain shared by 33 Arabidopsis proteins" 1 2 8 10 At2g11775 expressed protein 1 2 8 11 At2g11910 expressed protein 1 2 8 12 At2g12550 ubiquitin-associated (UBA)/TS-N domain-containing protein low similarity to NUB1 (NEDD8-interacting protein) [Homo sapiens] GI:13383476; contains Pfam profile PF00627: UBA/TS-N domain 1 2 8 13 At2g12880 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 1 2 8 14 At2g13370 "chromodomain-helicase-DNA-binding family protein / CHD family protein similar to SP|O14647 Chromodomain-helicase-DNA-binding protein 2 (CHD-2) {Homo sapiens}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00385: 'chromo' (CHRromatin Organization MOdifier)" 1 2 8 15 At2g13540 mRNA cap-binding protein (ABH1) identical to mRNA cap binding protein [Arabidopsis thaliana] GI:15192738; contains Pfam profile PF02854: MIF4G domain; identical to cDNA nuclear cap-binding protein CBP80 GI:8515770 1 2 8 16 At2g13770 hypothetical protein 1 2 8 17 At2g13820 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 2 8 18 At2g17140 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 8 19 At2g17200 "ubiquitin family protein weak similarity to PLIC-2 (ubiquitin-like type II) [Homo sapiens] GI:9937505; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 1 2 8 20 At2g17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 / HMG-CoA reductase 2 (HMGR2) identical to SP|P43256 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (EC 1.1.1.34) (HMG- CoA reductase 2) (HMGR2) {Arabidopsis thaliana} 1 2 8 21 At2g17440 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeats 1 2 8 22 At2g17640 "serine O-acetyltransferase, putative (SAT-106) similar to Arabidopsis thaliana serine acetyltransferase GI:905391" 1 2 8 23 At2g17690 F-box family protein contains F-box domain Pfam:PF00646 1 2 8 24 At2g17840 senescence/dehydration-associated protein-related (ERD7) similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; strong similarity to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916; identical to cDNA ERD7 partial cds GI:15320411 1 2 8 25 At2g17890 "calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand" 1 2 9 1 At2g20630 "protein phosphatase 2C, putative / PP2C, putative " 1 2 9 2 At2g20670 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 1 2 9 3 At2g20805 hypothetical protein 1 2 9 4 At2g20825 expressed protein 1 2 9 5 At2g20950 expressed protein 1 2 9 6 At2g21030 expressed protein 1 2 9 7 At2g21190 ER lumen protein retaining receptor family protein similar to SP|P33948 ER lumen protein retaining receptor. {Plasmodium falciparum}; contains Pfam profile PF00810: ER lumen protein retaining receptor 1 2 9 8 At2g21230 bZIP family transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036) 1 2 9 9 At2g24060 "translation initiation factor 3 (IF-3) family protein similar to SP|P33319 Translation initiation factor IF-3 {Proteus vulgaris}; contains Pfam profiles PF00707: Translation initiation factor IF-3, C-terminal domain, PF05198: Translation initiation factor IF-3, N-terminal domain" 1 2 9 10 At2g24130 "leucine-rich repeat transmembrane protein kinase, putative " 1 2 9 11 At2g24300 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 1 2 9 12 At2g24360 "serine/threonine/tyrosine kinase, putative similar to serine/threonine/tyrosine kinase [Arachis hypogaea] gi|13124865|gb|AAK11734" 1 2 9 13 At2g24540 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 4 [Arabidopsis thaliana] GI:10716953; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 2 9 14 At2g24600 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 1 2 9 15 At2g24780 hypothetical protein 1 2 9 16 At2g24830 "zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 2 9 17 At2g27520 F-box family protein contains Pfam profile: PF00646 F-box domain 1 2 9 18 At2g27580 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 1 2 9 19 At2g27750 "nucleolar matrix protein-related contains Pfam domain, PF04935: Surfeit locus protein 6" 1 2 9 20 At2g27780 expressed protein 1 2 9 21 At2g27960 cyclin-dependent kinase / CDK (CKS1) identical to Cks1 protein [Arabidopsis thaliana] gi|2274859|emb|CAA03859 1 2 9 22 At2g28020 hypothetical protein 1 2 9 23 At2g28170 "cation/hydrogen exchanger, putative (CHX7) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 9 24 At2g28230 expressed protein 1 2 9 25 At2g30950 FtsH protease (VAR2) identical to zinc dependent protease VAR2 GI:7650138 from [Arabidopsis thaliana] 1 2 10 1 At2g31010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 10 2 At2g31150 expressed protein 1 2 10 3 At2g31210 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; PMID: 12679534 1 2 10 4 At2g31360 delta 9 desaturase (ADS2) identical to delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from [Arabidopsis thaliana] 1 2 10 5 At2g31400 "pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587, post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat" 1 2 10 6 At2g31570 "glutathione peroxidase, putative " 1 2 10 7 At2g31610 40S ribosomal protein S3 (RPS3A) 1 2 10 8 At2g34240 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 1 2 10 9 At2g34280 S locus F-box-related / SLF-related contains Pfam PF00646: F-box domain; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 1 2 10 10 At2g34390 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; an isoform contains a non-consensus GA-AG intron 1 2 10 11 At2g34420 chlorophyll A-B binding protein / LHCII type I (LHB1B2) identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16364 1 2 10 12 At2g34580 hypothetical protein 1 2 10 13 At2g34630 "geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative identical to GI:11322965 A. thaliana geranyl diphosphate synthase" 1 2 10 14 At2g34810 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 2 10 15 At2g34870 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 10 16 At2g37440 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 10 17 At2g37510 "RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein {Zea mays}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 2 10 18 At2g37660 expressed protein 1 2 10 19 At2g37720 expressed protein 1 2 10 20 At2g37870 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 2 10 21 At2g37925 copper transporter family protein similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family; supporting cDNA gi|18496855|gb|AF466372.1| 1 2 10 22 At2g38080 "laccase, putative / diphenol oxidase, putative similar to diphenol oxidase [Nicotiana tabacum][GI:1685087]" 1 2 10 23 At2g38140 chloroplast 30S ribosomal protein S31 (PSRP4) 1 2 10 24 At2g40680 hypothetical protein 1 2 10 25 At2g40740 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 2 11 1 At2g40890 "cytochrome P450 98A3, putative (CYP98A3) identical to Cytochrome P450 98A3 (SP|O22203) [Arabidopsis thaliana]; similar to gi:17978651 from Pinus taeda" 1 2 11 2 At2g40925 F-box family protein contains F-box domain Pfam:PF00646 1 2 11 3 At2g41060 RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 2 11 4 At2g41110 calmodulin-2/3/5 (CAM2) (CAL1) almost identical to Calmodulin-2/3/5 SP:P25069 from [Arabidopsis thaliana] 1 2 11 5 At2g41260 glycine-rich protein / late embryogenesis abundant protein (M17) identical to late-embryogenesis abundant M17 protein GI:3342551 from [Arabidopsis thaliana] 1 2 11 6 At2g41340 "eukaryotic rpb5 RNA polymerase subunit family protein similar to SP|Q09191 DNA-directed RNA polymerases II 24 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 1 2 11 7 At2g43940 "thiol methyltransferase, putative similar to thiol methyltransferase 2 GI:14583121 from [Brassica oleracea]" 1 2 11 8 At2g43960 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam profile: PF01805 surp module 1 2 11 9 At2g44080 expressed protein 1 2 11 10 At2g44130 "kelch repeat-containing F-box family protein very low similarity to SP|Q9ER30 Kelch-related protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 2 11 11 At2g44290 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3) similar to lipid transfer protein Picea abies GI:2627141; contains Pfam profile: PF00234: Protease inhibitor/seed storage/LTP family; identical to cDNA YLS3 mRNA for non-specific lipid transfer protein (nLTP) like protein, partial cds GI:13122283" 1 2 11 12 At2g44360 expressed protein 1 2 11 13 At2g44520 "UbiA prenyltransferase family protein similar to SP|Q12887 Protoheme IX farnesyltransferase, mitochondrial precursor (EC 2.5.1.-) (Heme O synthase) {Homo sapiens}, SP|P21592 COX10 {Saccharomyces cerevisiae}" 1 2 11 14 At2g44570 glycosyl hydrolase family 9 protein 1 2 11 15 At2g47240 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein similar to GI:1617270 (MF7P) and gi:1617628 (MF45P) from [Brassica napus] ; contains Pfam AMP-binding enzyme domain PF00501 1 2 11 16 At2g47300 hypothetical protein 1 2 11 17 At2g47470 thioredoxin family protein similar to protein disulfide isomerase [Dictyostelium discoideum] GI:2627440; contains Pfam profile: PF00085 Thioredoxin 1 2 11 18 At2g47500 kinesin motor protein-related 1 2 11 19 At2g47660 hypothetical protein 1 2 11 20 At2g47720 expressed protein 1 2 11 21 At2g47890 zinc finger (B-box type) family protein 1 2 11 22 At2g47910 expressed protein 1 2 11 23 At3g03250 "UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative strong similarity to SP|P19595 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum}; contains Pfam profile PF01704: UTP--glucose-1-phosphate uridylyltransferase" 1 2 11 24 At3g03290 universal stress protein (USP) family protein contains Pfam profile: PF00582 universal stress protein family 1 2 11 25 At3g03460 hypothetical protein 1 2 12 1 At3g03520 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 1 2 12 2 At3g03700 "expressed protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 1 2 12 3 At3g03750 "SET domain-containing protein low similarity to G9a [Homo sapiens] GI:287865; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif" 1 2 12 4 At3g03890 expressed protein 1 2 12 5 At3g03940 "protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain" 1 2 12 6 At3g06455 "splicing factor-related contains weak similarity to Swiss-Prot:Q12874 splicing factor 3A subunit 3 (Spliceosome associated protein 61, SAP 61, SF3a60) [Homo sapiens]" 1 2 12 7 At3g06500 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 1 2 12 8 At3g06640 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 2 12 10 At3g06790 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor [Garden snapdragon] SWISS-PROT:Q38732" 1 2 12 11 At3g06860 "fatty acid multifunctional protein (MFP2) identical to fatty acid multifunctional protein (AtMFP2) GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty acid beta-oxidation); contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase)" 1 2 12 12 At3g07020 UDP-glucose:sterol glucosyltransferase (UGT80A2) identical to UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] GI:2462931; contains Pfam profile: PF03033 glycosyltransferase family 28 N-terminal domain 1 2 12 13 At3g07070 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 12 14 At3g10110 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to TIM22 preprotein translocase [Rattus norvegicus] GI:6760457; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17 1 2 12 15 At3g10150 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 2 12 16 At3g10300 calcium-binding EF hand family protein low similarity to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 2 12 17 At3g10350 anion-transporting ATPase family protein similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase; contains non-consensus GA donor splice site at intron 5 1 2 12 18 At3g10490 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 1 2 12 19 At3g10530 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); BING4 (gi:3811380) {Mus musculus]; similar to hypothetical protein GB:P40055 [Saccharomyces cerevisiae] 1 2 12 20 At3g10660 "calcium-dependent protein kinase isoform 2 (CPK2) identical to calcium-dependent protein kinase isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 1 2 12 21 At3g10720 "pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase" 1 2 12 22 At3g13150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 12 23 At3g13190 "myosin heavy chain-related contains weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P05659) [Acanthamoeba castellanii]" 1 2 12 24 At3g13280 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 1 2 12 25 At3g13340 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (3 copies, 1 significant); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces]" 1 2 13 1 At3g13500 hypothetical protein 1 2 13 2 At3g13560 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 1 2 13 3 At3g13674 expressed protein 1 2 13 4 At3g13700 "RNA-binding protein, putative similar to mec-8 [Caenorhabditis elegans] GI:1370048; contains Pfam profile:PF00076 rrm:RNA recognition motif" 1 2 13 5 At3g16180 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 2 13 6 At3g16240 "delta tonoplast integral protein (delta-TIP) identical to delta tonoplast integral protein (delta-TIP) (GI:9279707)(GB:U39485) [Arabidopsis thaliana] (Plant Cell 8 (4), 587-599 (1996))" 1 2 13 7 At3g16440 jacalin lectin family protein contains Pfam profile: PF01419 jacalin-like lectin domain; similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767 1 2 13 8 At3g16480 "mitochondrial processing peptidase alpha subunit, putative similar to mitochondrial processing peptidase alpha subunit, mitochondrial precursor, Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II) [Potato] SWISS-PROT:P29677" 1 2 13 9 At3g16610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 13 10 At3g16670 expressed protein 1 2 13 11 At3g16830 WD-40 repeat family protein contains 10 WD-40 repeats (PF00400) (1 weak) 1 2 13 12 At3g16870 zinc finger (GATA type) family protein contains Pfam profile:PF00320 GATA:GATA zinc finger 1 2 13 13 At3g19515 expressed protein 1 2 13 14 At3g19553 amino acid permease family protein weak similarity to aspartate/glutamate transporter 1 [Mus musculus] GI:21322754; contains Pfam profile PF00324: Amino acid permease 1 2 13 15 At3g19710 "branched-chain amino acid aminotransferase, putative / branched-chain amino acid transaminase, putative (BCAT4) similar to branched-chain amino acid transaminase 6 [Arabidopsis thaliana] GI:13810195; contains Pfam profile: PF01063 aminotransferase class IV" 1 2 13 16 At3g19770 vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein contains Pfam domain PF02204: Vacuolar sorting protein 9 (VPS9) domain 1 2 13 17 At3g19940 "sugar transporter, putative similar to sugar transport protein [Arabidopsis thaliana] GI:16524; contains Pfam profile PF00083: major facilitator superfamily protein" 1 2 13 18 At3g20000 "porin family protein low similarity to haymaker protein [Mus musculus] GI:17834089, mitochondrial outer membrane protein MOM35 [Mus musculus] GI:6650562; contains Pfam profile PF01459: Eukaryotic porin" 1 2 13 19 At3g20140 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 1 2 13 20 At3g20190 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GB:AAA33715 [Petunia integrifolia]" 1 2 13 21 At3g22910 "calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) identical to SP|Q9LIK7 Potential calcium-transporting ATPase 13, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) {Arabidopsis thaliana}; similar to SP|Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca2+-ATPase, isoform 8) {Arabidopsis thaliana}; contains InterPro Accession IPR006069: Cation transporting ATPase" 1 2 13 22 At3g22960 "pyruvate kinase, putative similar to pyruvate kinase isozyme A, chloroplast precursor [Ricinus communis] SWISS-PROT:Q43117" 1 2 13 23 At3g23120 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5b GB:AAC78595 [Lycopersicon esculentum] (Plant Cell 10, 1915-1926 (1998);" 1 2 13 24 At3g23172 hypothetical protein 1 2 13 25 At3g23310 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 2 14 1 At3g23360 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase GB:AAD17805 from [Lotus japonicus]" 1 2 14 2 At3g23570 "dienelactone hydrolase family protein similar to SP|Q9ZT66 Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) {Zea mays}; contains Pfam profile: PF01738 dienelactone hydrolase family" 1 2 14 3 At3g23620 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 1 2 14 4 At3g26450 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 1 2 14 5 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 1 2 14 6 At3g26650 "glyceraldehyde 3-phosphate dehydrogenase A, chloroplast (GAPA) / NADP-dependent glyceraldehydephosphate dehydrogenase subunit A identical to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) {Arabidopsis thaliana}" 1 2 14 7 At3g26680 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 1 2 14 8 At3g26820 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 1 2 14 9 At3g26855 hypothetical protein 1 2 14 10 At3g27010 "TCP family transcription factor, putative similar to PCF2 [(GI:2580440) Oryza sativa]" 1 2 14 11 At3g27060 "ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative similar to ribonucleotide reductase R2 [Nicotiana tabacum] GI:1044912; contains Pfam profile PF00268: Ribonucleotide reductase, small chain" 1 2 14 12 At3g30150 hypothetical protein 1 2 14 13 At3g30220 hypothetical protein 1 2 14 14 At3g30440 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 2 14 15 At3g30500 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 1 2 14 16 At3g30710 "hypothetical protein similar to Arginine-tRNA-protein transferase 1 (EC 2.3.2.8)(R-transferase 1) (Arginyltransferase 1) (Arginyl-tRNA--protein transferase 1)(SP:Q9Z2A5) {Mus musculus}; similar to MRP homologs in mycobacteria (SP:P53382), which belong to the MR?/NBP35 family of ATP-binding proteins." 1 2 14 17 At3g30755 hypothetical protein 1 2 14 18 At3g31370 hypothetical protein contains similarity to hypothetical proteins 1 2 14 19 At3g31540 hypothetical protein 1 2 14 20 At3g44720 prephenate dehydratase family protein similar to bacterial PheA gene products 1 2 14 21 At3g44760 hypothetical protein 1 2 14 22 At3g44920 "cation/hydrogen exchanger, putative (CHX11) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 14 23 At3g44970 cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; contains Pfam profile: PF00067 cytochrome P450 1 2 14 24 At3g45120 hypothetical protein 1 2 14 25 At3g45180 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 2 15 1 At3g45390 "lectin protein kinase family protein contains Protein kinases ATP-binding region signature, Prosite:PS00107 and Legume lectins beta-chain signature, Prosite:PS00307" 1 2 15 2 At3g45443 expressed protein 1 2 15 3 At3g48260 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 15 4 At3g48320 "cytochrome P450 71A21, putative (CYP71A21) identical to Cytochrome P450 71A21 (SP:Q9STL2) [Arabidopsis thaliana]" 1 2 15 5 At3g48490 expressed protein 1 2 15 6 At3g48550 "expressed protein putative zinc-finger protein - Arabidopsis thaliana,PID:g4406777" 1 2 15 7 At3g48730 "glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) / glutamate-1-semialdehyde aminotransferase 2 (GSA-AT 2) identical to GSA2 [SP|Q42522]" 1 2 15 8 At3g48790 "serine C-palmitoyltransferase, putative similar to serine palmitoyltransferase from Solanum tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus musculus [SP|P97363]" 1 2 15 9 At3g48950 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 1 2 15 10 At3g49010 60S ribosomal protein L13 (RPL13B) / breast basic conserved protein 1-related (BBC1) 1 2 15 11 At3g51860 "cation exchanger, putative (CAX3) similar to high affinity calcium antiporter CAX1 [Arabidopsis thaliana] gi|9256741|gb|AAB05913; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563; non-consensus AT-acceptor splice site at intron 1" 1 2 15 12 At3g51895 sulfate transporter (ST1) identical to sulfate transporter [Arabidopsis thaliana] GI:2285885 1 2 15 13 At3g52050 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 1 2 15 14 At3g52080 "cation/hydrogen exchanger, putative (CHX28) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 15 15 At3g52230 expressed protein 1 2 15 16 At3g52270 hypothetical protein 1 2 15 17 At3g52440 "Dof-type zinc finger domain-containing protein DNA binding protein - Hordeum vulgare,PID:e1334094" 1 2 15 18 At3g52500 aspartyl protease family protein contains Pfam PF00026: eukaryotic aspartyl protease 1 2 15 19 At3g55010 "phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) identical to phosphoribosylformylglycinamidine cyclo-ligase, chloroplast precursor SP:Q05728 from [Arabidopsis thaliana]; contains Pfam profiles: PF02769 AIR synthase related protein, C-terminal domain, PF00586 AIR synthase related protein, N-terminal domain" 1 2 15 20 At3g55060 expressed protein contains weak similarity to intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae]; expression supported by MPSS 1 2 15 21 At3g55220 "splicing factor, putative contains CPSF A subunit region (PF03178); contains weak WD-40 repeat (PF00400); similar to Splicing factor 3B subunit 3 (SF3b130)/spliceosomal protein/Splicing factor 3B subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens, EMBL:HSAJ1443_1" 1 2 15 22 At3g55280 60S ribosomal protein L23A (RPL23aB) various ribosomal L23a proteins 1 2 15 23 At3g55460 "SC35-like splicing factor, 30 kD (SCL30) nearly identical to SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana] GI:9843657; Serine/arginine-rich protein/putative splicing factor, Arabidopdis thaliana, EMBL:AF099940; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 1 2 15 24 At3g55530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 2 15 25 At3g55700 "UDP-glucoronosyl/UDP-glucosyl transferase family protein glucuronosyl transferase homolog, Lycopersicon esculentum, PIR:S39507 ;contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase" 1 2 16 1 At3g55740 proline transporter 2 (ProT2) identical to proline transporter 2 GI:1769903 from [Arabidopsis thaliana] 1 2 16 2 At3g58610 "ketol-acid reductoisomerase identical to ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (Swiss-Prot:Q05758) [Arabidopsis thaliana]" 1 2 16 3 At3g58670 expressed protein 1 2 16 4 At3g58840 expressed protein 1 2 16 5 At3g58900 F-box family protein contains F-box domain Pfam:PF00646 1 2 16 6 At3g59070 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 (GI:11357190) [Arabidopsis thaliana]" 1 2 16 7 At3g59110 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 16 8 At3g59290 "epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Af10-protein - Avena fatua, EMBL:U80041" 1 2 16 9 At3g59330 "anthocyanin-related membrane protein family similar to anthocyanin-related membrane protein 1 (GI:16416383), anthocyanin-related membrane protein 2 (GI:16416385), anthocyanin-related membrane protein 3 (GI:16416387) [Arabidopsis thaliana]" 1 2 16 10 At3g62000 O-methyltransferase family 3 protein several O-methyltransferases - different species; contains Pfam 01596 O-methyltransferase domain 1 2 16 11 At3g62040 haloacid dehalogenase-like hydrolase family protein similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 1 2 16 12 At3g62220 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 2 16 13 At3g62280 "GDSL-motif lipase/hydrolase family protein similar to Enod8.1 [Medicago truncatula] GI:18390045; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 16 14 At3g62440 F-box family protein contains F-box domain Pfam:PF00646 1 2 16 15 At3g62500 expressed protein hypothetical proteins - Arabidopsis thaliana; expression supported by MPSS 1 2 16 16 At3g62670 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 1 2 16 17 At3g62730 "expressed protein DESSICATION-RELATED PROTEIN PCC13-62 PRECURSOR - Craterostigma plantagineum, PIR:E45509" 1 2 16 18 At4g01600 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 1 2 16 19 At4g01650 expressed protein 1 2 16 20 At4g01800 "preprotein translocase secA subunit, putative similar to preprotein translocase secA subunit, chloroplast [precursor] SP:Q9SYI0 from [Arabidopsis thaliana]; non-consensus GA donor splice site at exon 4" 1 2 16 21 At4g01860 transducin family protein / WD-40 repeat family protein contains ten G-protein beta-subunit (beta-transducin) WD-40 repeats 1 2 16 22 At4g01980 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 1 2 16 23 At4g02020 zeste-like protein 1 (EZA1) identical to enhancer of zeste-like protein 1(EZA1) (GI:4185507) [Arabidopsis thaliana]; similar to polycomb group [Arabidopsis thaliana] GI:1903019 (curly leaf); contains Pfam profile PF00856: SET domain 1 2 16 24 At4g02180 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 2 16 25 At4g02210 expressed protein 1 2 17 1 At4g05150 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein various predicted proteins contains Pfam profile PF00564: PB1 domain 1 2 17 2 At4g05210 bacterial transferase hexapeptide repeat-containing protein similar to SP|P32203 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) {Yersinia enterocolitica}; contains Pfam profile PF00132: Bacterial transferase hexapeptide (three repeats) 1 2 17 3 At4g05380 "AAA-type ATPase family protein contains similarity to mitochondrial ATPase (AAA family) Bcs1p, Saccharomyces cerevisiae, Swiss Prot:P32839" 1 2 17 4 At4g05440 temperature sensing protein-related contains weak similarity to D123 (GI:1236114) [Rattus norvegicus] 1 2 17 5 At4g05630 expressed protein 1 2 17 6 At4g06479 hypothetical protein 1 2 17 7 At4g07340 replication protein-related contains similarity to Xenopus laevis replication protein A1 (SW:RFA1_XENLA); contains non-consensus (GC) donor splice site at intron 3 1 2 17 8 At4g07430 "hypothetical protein similar to At2g10840, At5g35280, At2g10500, At2g05860, At4g07310, At1g39270" 1 2 17 9 At4g10570 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 1 2 17 10 At4g10620 expressed protein 1 2 17 11 At4g10800 "expressed protein predicted proteins, Arabidopsis thaliana" 1 2 17 12 At4g10845 hypothetical protein 1 2 17 13 At4g10970 expressed protein 1 2 17 14 At4g11040 "protein phosphatase 2C, putative / PP2C, putative phosphoprotein phosphatase (EC 3.1.3.16) 2C - Arabidopsis thaliana, PIR2:S55457" 1 2 17 15 At4g11190 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein [Forsythia x intermedia] gi|6694693|gb|AAF25357; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 2 17 16 At4g11240 serine/threonine protein phosphatase PP1 isozyme 6 (PP1BG) (TOPP6) identical to SP|P48486 Serine/threonine protein phosphatase PP1 isozyme 6 (EC 3.1.3.16) {Arabidopsis thaliana} 1 2 17 17 At4g13980 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 1 2 17 18 At4g14030 "selenium-binding protein, putative contains Pfam profile PF05694: 56kDa selenium binding protein (SBP56); identical to Putative selenium-binding protein (Swiss-Prot:O23264) [Arabidopsis thaliana]; similar to selenium binding protein (GI:15485232) [Arabidopsis thaliana]; identical to cDNA from partial mRNA for selenium binding protein (sbp gene) GI:15485231" 1 2 17 19 At4g14160 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 1 2 17 20 At4g14210 "phytoene dehydrogenase, chloroplast / phytoene desaturase (PDS) identical to SP|Q07356 Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase){Arabidopsis thaliana}; high similarity to phytoene desaturase [Lycopersicon esculentum][GI:19287]" 1 2 17 21 At4g14340 casein kinase I (CKI1) identical to casein kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395 1 2 17 22 At4g14380 expressed protein 1 2 17 23 At4g14510 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 1 2 17 24 At4g14550 auxin-responsive AUX/IAA family protein identical to IAA14 (GI:972931) [Arabidopsis thaliana]; similar to SP|Q38825 Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7) {Arabidopsis thaliana} 1 2 17 25 At4g16930 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 1 2 18 1 At4g16970 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 18 2 At4g17130 hypothetical protein 1 2 18 3 At4g17190 farnesyl pyrophosphate synthetase 2 (FPS2) / FPP synthetase 2 / farnesyl diphosphate synthase 2 identical to SP|Q43315 Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis thaliana} 1 2 18 4 At4g17350 expressed protein 1 2 18 5 At4g17420 "expressed protein contains Pfam domain, PF01987: Protein of unknown function" 1 2 18 6 At4g17570 zinc finger (GATA type) family protein 1 2 18 7 At4g17615 calcineurin B-like protein 1 (CBL1) identical to calcineurin B-like protein 1 (GI:3309082) [Arabidopsis thaliana] 1 2 18 8 At4g20200 "terpene synthase/cyclase family protein 5-epi-aristolochene synthase, Nicotiana tabacum, PATX:G505588" 1 2 18 9 At4g20260 DREPP plasma membrane polypeptide family protein contains Pfam profile: PF05558 DREPP plasma membrane polypeptide 1 2 18 10 At4g20420 tapetum-specific protein-related similar to SaTAP 35 [Sinapis alba] GI:408108 1 2 18 11 At4g20460 "NAD-dependent epimerase/dehydratase family protein similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba GI:3021357 [EMBL:AJ005082], Bacillus subtilis SP|P55180; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 1 2 18 12 At4g20770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 18 13 At4g20830 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 2 18 14 At4g21010 "transcription initiation factor-related contains weak similarity to Transcription initiation factor IIE, beta subunit (TFIIE-beta) (Swiss-Prot:P29084) [Homo sapiens]" 1 2 18 15 At4g21070 "BRCT domain-containing protein / zinc finger (C3HC4-type RING finger) family protein (BRCA1) contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT) domain, PF00097: Zinc finger, C3HC4 type (RING finger), PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473" 1 2 18 16 At4g23640 "potassium transporter / tiny root hair 1 protein (TRH1) identical to tiny root hair 1 protein [Arabidopsis thaliana] gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family member, PMID:11500563; identical to cDNA mRNA for tiny root hair 1 protein (trh1) GI:11181957" 1 2 18 17 At4g23690 disease resistance-responsive family protein / dirigent family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669; similar to dirigent protein [Forsythia x intermedia] gi|6694693|gb|AAF25357 1 2 18 18 At4g23870 "expressed protein predicted proteins, Arabidopsis thaliana" 1 2 18 19 At4g23900 nucleoside diphosphate kinase 4 (NDK4) contains Pfam PF00334 : Nucleoside diphosphate kinase domain; identical to nucleoside diphosphate kinase 4 (GI:11990430) [Arabidopsis thaliana] 1 2 18 20 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 1 2 18 21 At4g24110 expressed protein 1 2 18 22 At4g24265 expressed protein 1 2 18 23 At4g24290 expressed protein 1 2 18 24 At4g26870 "aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative simialr to aspartate-tRNA ligase (EC 6.1.1.12) from Drosophila melanogaster GI:4512034, Homo sapiens SP|P14868, Rattus norvegicus SP|P15178; contains Pfam profile PF00152 tRNA synthetases class II (D, K and N)" 1 2 18 25 At4g26920 hypothetical protein 1 2 19 1 At4g27070 "tryptophan synthase, beta subunit 2 (TSB2) identical to SP|25269" 1 2 19 2 At4g27120 expressed protein 1 2 19 3 At4g27310 "zinc finger (B-box type) family protein zinc-finger protein S3574, Oryza sativa, PIR3:JE0113" 1 2 19 4 At4g27370 "myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF00612 IQ calmodulin-binding motif" 1 2 19 5 At4g27530 expressed protein 1 2 19 6 At4g27585 band 7 family protein similar to stomatin-like protein [Zea mays] GI:7716464; contains Pfam profile PF01145: SPFH domain / Band 7 family 1 2 19 7 At4g30160 "villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain" 1 2 19 8 At4g30210 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-cytochrome P450 oxydoreductase from [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183564, GI:13183566" 1 2 19 9 At4g30360 "cyclic nucleotide-regulated ion channel, putative (CNGC17) similar to cyclic nucleotide and calmodulin-regulated ion channel cngc5 GI:4581205 from [Arabidopsis thaliana]" 1 2 19 10 At4g30410 expressed protein similar to cDNA bHLH transcription factor (bHLH eta gene) gi:32563007 1 2 19 11 At4g30550 "glutamine amidotransferase class-I domain-containing protein similar to defense-related protein [Brassica carinata] GI:14009290, component of aniline dioxygenase (GMP synthase like protein) - Acinetobacter sp.,PID:d1013698; contains Pfam profile PF00117: glutamine amidotransferase class-I" 1 2 19 12 At4g30610 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 1 2 19 13 At4g30760 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 1 2 19 14 At4g30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related contains similarity to CDK-activating kinase assembly factor MAT1 (RING finger protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (Swiss-Prot:P51950) [Marthasterias glacialis] 1 2 19 15 At4g33310 expressed protein 1 2 19 16 At4g33370 "DEAD-box protein abstrakt, putative RNA helicase DBP2 - Saccharomyces cerevisiae, PID:g5272" 1 2 19 17 At4g33520 "metal-transporting P-type ATPase, putative (PAA1) nearly identical to gi:2668492; contains Pfam heavy-metal-associated domain PF00403" 1 2 19 18 At4g33580 carbonic anhydrase family protein / carbonate dehydratase family protein similar to SP|P46512 Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase 1) {Flaveria linearis}; contains Pfam profile PF00484: Carbonic anhydrase 1 2 19 19 At4g33730 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 1 2 19 20 At4g33790 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein; No start codon identified, may contain anomalous splicing at 5' end." 1 2 19 21 At4g33930 "glycine-rich protein hyphally regulated protein, Candida albicans, PIR2:S58135" 1 2 19 22 At4g33980 expressed protein 1 2 19 23 AT5G57480 PC-1 B12 1 2 19 24 3XSSC PC-1 B24 1 2 19 25 AT1G29930 PC-1 F12 1 2 20 1 3XSSC PC-1 F24 1 2 20 2 AT3G44150 PC-1 J12 1 2 20 3 3XSSC PC-1 J24 1 2 20 4 AT4G00810 PC-1 N12 1 2 20 5 3XSSC PC-1 N24 1 2 20 6 At4g36540 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 1 2 20 7 At4g36580 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 1 2 20 8 At4g36730 G-box binding factor 1 (GBF1) identical to G-box binding factor 1 SP:P42774 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 1 2 20 9 At4g36760 aminopeptidase P similar to Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 1 2 20 10 At4g36925 expressed protein 1 2 20 11 At4g36990 heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) identical to heat shock transcription factor 4 (HSF4) SP:Q96320 from [Arabidopsis thaliana] 1 2 20 12 At4g37170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 20 13 At4g37220 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 1 2 20 14 At4g39810 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 1 2 20 15 At4g39860 expressed protein 1 2 20 16 At4g40020 hypothetical protein 1 2 20 17 At4g40060 homeobox-leucine zipper protein 16 (HB-16) / HD-ZIP transcription factor 16 identical to homeodomain leucine-zipper protein ATHB-16 (GP:5668909|) {Arabidopsis thaliana} 1 2 20 18 At5g01100 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 1 2 20 19 At5g01160 e-cadherin binding protein-related contains weak similarity to E-cadherin binding protein E7 [Mus musculus GP|9622093|gb|AAF89617 1 2 20 20 At5g01290 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF03919: mRNA capping enzyme C-terminal domain" 1 2 20 21 At5g01350 expressed protein 1 2 20 22 At5g04050 maturase-related contains similarity to maturase proteins from several species 1 2 20 23 At5g04120 phosphoglycerate/bisphosphoglycerate mutase family protein low similarity to SP|P36623 Phosphoglycerate mutase (EC 5.4.2.1) {Schizosaccharomyces pombe}; contains Pfam profile PF00300: phosphoglycerate mutase family 1 2 20 24 At5g04280 glycine-rich RNA-binding protein 1 2 20 25 At5g04350 self-incompatibility protein-related similar to self-incompatibility [Papaver nudicaule] GI:3097262 1 2 21 1 At5g04520 expressed protein ; expression supported by MPSS 1 2 21 2 At5g04600 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 2 21 3 At5g04770 amino acid permease family protein similar to cationic amino acid transporter-1 [Rattus norvegicus] GI:1589917; contains Pfam profile PF00324: Amino acid permease 1 2 21 4 At5g04810 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 1 2 21 5 At5g07350 tudor domain-containing protein / nuclease family protein contains Pfam domains PF00567: Tudor domain and PF00565: Staphylococcal nuclease homologue 1 2 21 6 At5g07400 forkhead-associated domain-containing protein / FHA domain-containing protein 1 2 21 7 At5g07570 glycine/proline-rich protein contains similarity to flagelliform silk protein [Nephila clavipes] gi|7106224|gb|AAF36090 1 2 21 8 At5g07630 nuclear division RFT family protein low similarity to SP|P38206 Nuclear division RFT1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04506: Rft protein 1 2 21 9 At5g07820 expressed protein 1 2 21 10 At5g07880 "SNAP25 homologous protein, putative / synaptosomal-associated protein SNAP25-like, putative (SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25 homologous protein SNAP29 (AtSNAP29)(Synaptosomal-associated protein SNAP25-like 2) [Arabidopsis thaliana]; contains Pfam profile: PF05739 SNARE domain" 1 2 21 11 At5g08060 "expressed protein sigma factor F inhibitor spoIIAB, Bacillus megaterium, PIR:B48402" 1 2 21 12 At5g08110 "DEAD/DEAH box helicase, putative several putative ATP-dependent helicases" 1 2 21 13 At5g11140 hypothetical protein 1 2 21 14 At5g11180 "glutamate receptor family protein (GLR2.6) plant glutamate receptor family, PMID:11379626" 1 2 21 15 At5g11350 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 21 16 At5g11410 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 1 2 21 17 At5g11590 "AP2 domain-containing transcription factor, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana]" 1 2 21 18 At5g11630 expressed protein 1 2 21 19 At5g11810 expressed protein 1 2 21 20 At5g11870 expressed protein 1 2 21 21 At5g15010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 21 22 At5g15070 expressed protein 1 2 21 23 At5g15230 gibberellin-regulated protein 4 (GASA4) / gibberellin-responsive protein 4 identical to SP|P46690 Gibberellin-regulated protein 4 precursor {Arabidopsis thaliana} 1 2 21 24 At5g15280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 21 25 At5g15460 expressed protein 1 2 22 1 At5g15510 expressed protein 1 2 22 2 At5g15660 F-box family protein contains Pfam PF00646: F-box domain 1 2 22 3 At5g15720 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386) and EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 1 2 22 4 At5g18360 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 2 22 5 At5g18410 expressed protein similar to p53 inducible protein [Homo sapiens] GI:5616320 1 2 22 6 At5g18550 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 2 22 7 At5g18610 "protein kinase family protein contains eukaryotic protein kinase domain, PROSITE:PS00107" 1 2 22 8 At5g18740 expressed protein predicted proteins - Arabidopsis thaliana; expression supported by MPSS 1 2 22 9 At5g18800 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein contains Pfam profile: PF05850 NADH-ubiquinone oxidoreductase 19 kDa subunit 1 2 22 10 At5g18940 Mo25 family protein similar to SP|Q06138 MO25 protein {Mus musculus}; contains Pfam profile PF03204: Mo25 protein family 1 2 22 11 At5g18990 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 2 22 12 At5g22320 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 1 2 22 13 At5g22370 "ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein" 1 2 22 14 At5g22545 expressed protein 1 2 22 15 At5g22580 expressed protein 1 2 22 16 At5g22740 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 1 2 22 17 At5g22790 expressed protein 1 2 22 18 At5g22950 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 2 22 19 At5g23010 2-isopropylmalate synthase 3 (IMS3) identical to 2-isopropylmalate synthase (IMS3) [Arabidopsis thaliana] GI:15983745; identical to cDNA 2-isopropylmalate synthase (IMS3) GI:15983744 1 2 22 20 At5g25590 expressed protein contains Pfam profile PF04783: Protein of unknown function (DUF630) 1 2 22 21 At5g25750 hypothetical protein 1 2 22 22 At5g25890 auxin-responsive protein / indoleacetic acid-induced protein 28 (IAA28) identical to SP|Q9XFM0|AXIS_ARATH Auxin-responsive protein IAA28 (Indoleacetic acid-induced protein 28) {Arabidopsis thaliana} 1 2 22 23 At5g25950 "hypothetical protein various predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 1 2 22 24 At5g26100 hypothetical protein 1 2 22 25 At5g26160 expressed protein 1 2 23 1 At5g26320 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 2 23 2 At5g26594 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 1 2 23 3 At5g32600 hypothetical protein 1 2 23 4 At5g32775 hypothetical protein 1 2 23 5 At5g33390 glycine-rich protein similar to nuclear antigen EBNA-1 (GI:3342234) {Cercopithecine herpesvirus 15} 1 2 23 6 At5g34358 hypothetical protein 1 2 23 7 At5g34895 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At3g30450, At4g03990, At3g47270, At2g02200" 1 2 23 8 At5g34940 "glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase precursor [Scutellaria baicalensis] GI:8918740; contains Pfam profile PF03662: Glycosyl hydrolase family 79, N-terminal domain" 1 2 23 9 At5g35190 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 23 10 At5g35230 hypothetical protein 1 2 23 11 At5g38386 F-box family protein contains F-box domain Pfam:PF00646 1 2 23 12 At5g38430 "ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) identical to SP|P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) {Arabidopsis thaliana}" 1 2 23 13 At5g38595 hypothetical protein 1 2 23 14 At5g38650 proteasome maturation factor UMP1 family protein contains Pfam profile PF05348: Proteasome maturation factor UMP1 1 2 23 15 At5g38830 tRNA synthetase class I (C) family protein similar to SP|Q06752 Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase) (CysRS) {Bacillus subtilis}; contains Pfam profile PF01406: tRNA synthetases class I (C) 1 2 23 16 At5g38895 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 2 23 17 At5g39050 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 1 2 23 18 At5g39130 "germin-like protein, putative identical to germin-like protein subfamily 1 member 16 (SP|Q9FIC8)" 1 2 23 19 At5g41970 expressed protein contains Pfam profile PF03690: Uncharacterised protein family (UPF0160) 1 2 23 20 At5g42020 luminal binding protein 2 (BiP-2) (BP2) similar to SWISS-PROT: Q39043; GI:1303695; luminal binding protein (BiP) [Arabidopsis thaliana] 1 2 23 21 At5g42170 "family II extracellular lipase, putative similar to family II lipase EXL3 [Arabidopsis thaliana] GI:15054386; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 23 22 At5g42230 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)] 1 2 23 23 At5g42390 metalloendopeptidase identical to chloroplast processing enzyme metalloendopeptidase [Arabidopsis thaliana] gi|2827039|gb|AAC39482 1 2 23 24 At5g42450 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 23 25 At5g42635 glycine-rich protein 1 2 24 1 At5g42680 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 2 24 2 At5g45250 "disease resistance protein (TIR-NBS-LRR class), putative (RPS4) domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Identical to RPS4 (GI:11357255). False intron created at intron 2 to escape a frameshift in the BAC sequence." 1 2 24 3 At5g45280 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 1 2 24 4 At5g45420 myb family transcription factor contains Pfam profile: PF00249 Myb DNA binding domain 1 2 24 5 At5g45480 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 1 2 24 6 At5g45620 "26S proteasome regulatory subunit, putative (RPN9) contains similarity to 26S proteasome subunit p40.5 GI:3618343 from [Homo sapiens]" 1 2 24 7 At5g45680 "FK506-binding protein 1 (FKBP13) identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplast precursor (Ppiase) (Rotamase) (SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744) [Arabidopsis thaliana]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 1 2 24 8 At5g45820 CBL-interacting protein kinase 20 (CIPK20) identical to CBL-interacting protein kinase 20 [Arabidopsis thaliana] gi|14486384|gb|AAK61493 1 2 24 9 At5g45880 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 1 2 24 10 At5g48470 expressed protein 1 2 24 11 At5g48520 expressed protein similar to unknown protein (gb|AAB97010.1) 1 2 24 12 At5g48657 defense protein-related weak similarity to SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis thaliana} 1 2 24 13 At5g48690 hypothetical protein 1 2 24 14 At5g48870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm5 [Homo sapiens] SWISS-PROT:Q9Y4Y9" 1 2 24 15 At5g48930 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus [GI:3288180, GI:2239091]; contains Pfam profile PF02458 transferase family" 1 2 24 16 At5g49080 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 24 17 At5g49140 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 2 24 18 At5g51860 MADS-box protein (AGL72) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); 1 2 24 19 At5g51900 cytochrome P450 family similar to cytochrome P450 86A1 (SP:P48422) [Arabidopsis thaliana] 1 2 24 20 At5g52065 hypothetical protein 1 2 24 21 At5g52120 F-box family protein / SKP1 interacting partner 3-related contains Pfam profile PF00646: F-box domain 1 2 24 22 At5g52290 hypothetical protein 1 2 24 23 At5g52350 exocyst subunit EXO70 family protein strong similarity to unknown protein (emb|CAB83315.1); contains Pfam domain PF03081: Exo70 exocyst complex subunit; 1 2 24 24 At5g52530 dentin sialophosphoprotein-related contains weak similarity to dentin sialophosphoprotein precursor (Dentin matrix protein-3) (DMP- 3) (Swiss-Prot:P97399) [Mus musculus] 1 2 24 25 At5g52570 "beta-carotene hydroxylase, putative similar to GI:1575296, beta-carotene hydroxylase" 1 2 25 1 At5g55230 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 2 25 2 At5g55290 ATP synthase subunit H family protein contains weak similarity to Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) (Swiss-Prot:P81103) [Bos taurus]; contains Pfam profile PF05493: ATP synthase subunit H 1 2 25 3 At5g55470 "sodium proton exchanger / Na+/H+ exchanger 4 (NHX4) identical to Na+/H+ exchanger 4 [Arabidopsis thaliana] GI:19919844; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 1 2 25 4 At5g55520 expressed protein weak similarity to phragmoplast-associated kinesin-related protein 1 [Arabidopsis thaliana] GI:8745333; expression supported by MPSS 1 2 25 5 At5g55660 expressed protein similar to unknown protein (pir||T08929) 1 2 25 6 At5g55720 pectate lyase family protein similar to pectate lyase 1 GP:6606532 from [Musa acuminata] 1 2 25 7 At5g55893 hypothetical protein 1 2 25 8 At5g55950 "transporter-related low similarity to UDP-sugar transporter [Drosophila melanogaster] GI:14971008, UDP-glucuronic acid transporter [Homo sapiens] GI:11463949" 1 2 25 9 At5g58550 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 1 2 25 10 At5g58600 "expressed protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 1 2 25 11 At5g58760 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); damage-specific DNA binding protein 2 (GI:10798819) [Homo sapiens] 1 2 25 12 At5g58790 expressed protein ; expression supported by MPSS 1 2 25 13 At5g58970 uncoupling protein (UCP2) identical to uncoupling protein GI:4063007 from [Arabidopsis thaliana] 1 2 25 14 At5g59020 expressed protein 1 2 25 15 At5g59160 serine/threonine protein phosphatase PP1 isozyme 2 (TOPP2) identical to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana} 1 2 25 16 At5g59210 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, gizzard smooth muscle (Swiss-Prot:P10587) [Gallus gallus]" 1 2 25 17 At5g61820 "expressed protein MtN19, Medicago truncatula, EMBL:MTY15367" 1 2 25 18 At5g61890 "AP2 domain-containing transcription factor family protein similar to RAP2.6 (GP:17065542) {Arabidopsis thaliana}; AP2 domain containing protein, Arabidopsis thaliana, EMBL:ATAF3099" 1 2 25 19 At5g62070 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 2 25 20 At5g62120 hypothetical protein 1 2 25 21 At5g62280 expressed protein 1 2 25 22 At5g62340 invertase/pectin methylesterase inhibitor family protein similar to SP|Q42534 Pectinesterase 2 precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2) {Arabidopsis thaliana}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 1 2 25 23 At5g62500 "microtubule-associated EB1 family protein similar to EBF3-S (Microtubule-associated protein) [Homo sapiens] GI:12751131; contains Pfam profiles PF00307: Calponin homology (CH) domain, PF03271: EB1 protein" 1 2 25 24 At5g62560 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 1 2 25 25 At5g65100 ethylene insensitive 3 family protein contains Pfam profile: PF04873 ethylene insensitive 3 1 2 26 1 At5g65165 "succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-3) nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-3) [gi:12049602] from Arabidopsis thaliana" 1 2 26 2 At5g65300 expressed protein 1 2 26 3 At5g65360 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 1 2 26 4 At5g65510 "ovule development protein, putative similar to AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana]" 1 2 26 5 At5g65570 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 26 6 At5g65720 "cysteine desulfurase, mitochondrial (NIFS) identical to Cysteine desulfurase, mitochondrial precursor (SP:O49543) {Arabidopsis thaliana}; identical to cDNA GI:12656131; contains Pfam profile PF00266: aminotransferase, class V" 1 2 26 7 At5g65780 "branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) nearly identical to SP|Q9FYA6 Branched-chain amino acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 1 2 26 8 ath-MIR169g miRNA gene Arabidopsis thaliana miR169g stem-loop 1 2 26 9 ath-MIR156e miRNA gene Arabidopsis thaliana miR156e stem-loop 1 2 26 10 ath-MIR169n miRNA gene Arabidopsis thaliana miR169n stem-loop 1 2 26 11 ath-MIR395e miRNA gene Arabidopsis thaliana miR395e stem-loop 1 2 26 12 3xSSC 3xSSC 1 2 26 13 3xSSC 3xSSC 1 2 26 14 3xSSC 3xSSC 1 2 26 15 3xSSC 3xSSC 1 2 26 16 At3g44720 prephenate dehydratase family protein similar to bacterial PheA gene products 1 2 26 17 At3g44760 hypothetical protein 1 2 26 18 At3g44920 "cation/hydrogen exchanger, putative (CHX11) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 26 19 At3g44970 cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; contains Pfam profile: PF00067 cytochrome P450 1 2 26 20 At3g45120 hypothetical protein 1 2 26 21 At3g45180 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 2 26 22 At3g45390 "lectin protein kinase family protein contains Protein kinases ATP-binding region signature, Prosite:PS00107 and Legume lectins beta-chain signature, Prosite:PS00307" 1 2 26 23 At3g45443 expressed protein 1 2 26 24 Blank Blank 1 2 26 25 Blank Blank 1 3 1 1 atc05 Randomly generated negative control 1 3 1 2 atc11 Randomly generated negative control 1 3 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 1 3 1 4 atc01 Randomly generated negative control 1 3 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 1 3 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 3 1 7 atc09 Randomly generated negative control 1 3 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 1 3 1 9 At1g02050 "chalcone and stilbene synthase family protein Similar to rice chalcone synthase homolog, gp|U90341|2507617 and anther specific protein, gp|Y14507|2326772" 1 3 1 10 At1g02080 "transcriptional regulator-related contains Pfam PF04054: CCR4-Not complex component, Not1; contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to General negative regulator of transcription subunit 1 (SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs gb|T44328 and gb|AA395265" 1 3 1 11 At1g02190 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]" 1 3 1 12 At1g02250 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC1 (GI:21554126) (Arabidopsis thaliana) 1 3 1 13 At1g02410 "cytochrome c oxidase assembly protein CtaG / Cox11 family similar to cytochrome c oxidase assembly protein cox11 GI:1244782 from [Saccharomyces cerevisiae]; similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor (SP:Q9Y6N1){Homo sapiens}; contains Pfam PF04442: Cytochrome c oxidase assembly protein CtaG / Cox11" 1 3 1 14 At1g02470 expressed protein contains non-consensus splice sites; 1 3 1 15 At1g02660 lipase class 3 family protein contains Pfam profile PF01764: Lipase 1 3 1 16 At1g02700 expressed protein similar to hypothetical protein GB:CAB80707 GI:7268598 from [Arabidopsis thaliana] 1 3 1 17 At1g05300 "metal transporter, putative (ZIP5) identical to putative metal transporter ZIP5 [Arabidopsis thaliana] gi|17385784|gb|AAL38432; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 1 3 1 18 At1g05360 expressed protein Similar to Arabidopsis hypothetical protein PID:e326839 (gb|Z97337) contains transmembrane domains 1 3 1 19 At1g05520 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 1 3 1 20 At1g05575 expressed protein 1 3 1 21 At1g05710 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413; identical to bHLH transcription factor (bHLH-alpha gene)" 1 3 1 22 At1g05770 "jacalin lectin family protein similar to gi:6503088 (GB:AAF14583) from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494 (2000)); contains Pfam profile PF01419 jacalin-like lectin domain" 1 3 1 23 At1g05900 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 1 3 1 24 At1g05940 amino acid permease family protein low similarity to SP|P30823 High-affinity cationic amino acid transporter-1 (CAT-1) {Rattus norvegicus}; contains Pfam profile PF00324: Amino acid permease 1 3 1 25 At1g08450 calreticulin 3 (CRT3) identical to similar to SP|O04153 Calreticulin 3 precursor {Arabidopsis thaliana} 1 3 2 1 At1g08510 acyl-[acyl carrier protein] thioesterase / acyl-ACP thioesterase / oleoyl-[acyl-carrier protein] hydrolase / S-acyl fatty acid synthase thioesterase identical to acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana] GI:804948 1 3 2 2 At1g08670 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain;similar to epsin 2b (GI:3894397) [Homo sapiens] 1 3 2 3 At1g08720 "mitogen-activated protein kinase kinase kinase (MAPKKK) (EDR1) identical to EDR1, a MAP kinase kinase kinase [Arabidopsis thaliana] gi|11127925|gb|AAG31143" 1 3 2 4 At1g08845 expressed protein 1 3 2 5 At1g08920 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 1 3 2 6 At1g09080 luminal binding protein 3 (BiP-3) (BP3) Similar to Arabidopsis luminal binding protein (gb|D89342); contains Pfam domain PF00012: dnaK protein 1 3 2 7 At1g09155 SKP1 interacting partner 3-related low similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951 1 3 2 8 At1g11720 "starch synthase, putative strong similarity to soluble-starch-synthase [Solanum tuberosum] GI:1911166" 1 3 2 9 At1g11770 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 3 2 10 At1g11910 "aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 1 3 2 11 At1g11930 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 1 3 2 12 At1g12090 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 14 kDa polypeptide [Catharanthus roseus] GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 3 2 13 At1g12150 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS 1 3 2 14 At1g12330 expressed protein 1 3 2 15 At1g12370 type II CPD photolyase PHR1 (PHR1) nearly identical to type II CPD photolyase PHR1 [Arabidopsis thaliana] GI:2984707; similar to class II DNA photolyase (GI:5081541) [Chlamydomonas reinhardtii]; supporting cDNA gi|2984706|gb|AF053365.1|AF053365 1 3 2 16 At1g15140 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene 1 3 2 17 At1g15170 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 1 3 2 18 At1g15310 signal recognition particle 54 kDa protein 1 / SRP54 (SRP-54) (SRP-54A) identical to Swiss-Prot:P37106 signal recognition particle 54 kDa protein 1 (SRP54) [Arabidopsis thaliana] 1 3 2 19 At1g15350 expressed protein 1 3 2 20 At1g15480 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat" 1 3 2 21 At1g15540 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 3 2 22 At1g15740 leucine-rich repeat family protein 1 3 2 23 At1g15790 expressed protein 1 3 2 24 At1g18560 "hAT dimerisation domain-containing protein / BED zinc finger domain-containing protein / transposase-related weak similarity to Tam3-transposase [Antirrhinum majus] GI:16064; contains Pfam profiles PF02892: BED zinc finger, PF05699: hAT family dimerisation domain" 1 3 2 25 At1g18620 expressed protein 1 3 3 1 At1g18790 RWP-RK domain-containing protein contains Pfam profile: PF02042 RWP-RK domain 1 3 3 2 At1g18860 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 3 3 3 At1g19010 expressed protein 1 3 3 4 At1g19060 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 1 3 3 5 At1g19210 "AP2 domain-containing transcription factor, putative similar to AP2 domain transcription factor GI:4567204 from [Arabidopsis thaliana]" 1 3 3 6 At1g19270 "ubiquitin interaction motif-containing protein / LIM domain-containing protein weak similarity to LIM-homeobox protein [Mus musculus] GI:2149584, Hic-5 [Mus musculus] GI:664955; contains Pfam profiles PF02809: Ubiquitin interaction motif, PF00412: LIM domain" 1 3 3 7 At1g22170 phosphoglycerate/bisphosphoglycerate mutase family protein similar to SP|P31217 Phosphoglycerate mutase 1 (EC 5.4.2.1) {Escherichia coli O157:H7}; contains Pfam profile PF00300: phosphoglycerate mutase family 1 3 3 8 At1g22230 expressed protein ; expression supported by MPSS 1 3 3 9 At1g22335 expressed protein ; expression supported by MPSS 1 3 3 10 At1g22400 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 3 11 At1g22590 MADS-box family protein similar to putative DNA-binding protein GI:6714399 from [Arabidopsis thaliana]; MADS-box protein AGL87 1 3 3 12 At1g22640 myb family transcription factor (MYB4) similar to myb-related protein GI:1020155 from [Arabidopsis thaliana] 1 3 3 13 At1g22790 expressed protein identical to hypothetical protein GB:CAA72910 1 3 3 14 At1g22860 TGF beta receptor associated protein-related contains weak similarity to TGF beta receptor associated protein-1 [Homo sapiens] gi|3150052|gb|AAC16903 1 3 3 15 At1g26400 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 3 3 16 At1g26460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 3 17 At1g26650 expressed protein 1 3 3 18 At1g26680 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 1 3 3 19 At1g26820 ribonuclease 3 (RNS3) identical to ribonuclease SP:P42815 Ribonuclease 3 precursor (EC 3.1.27.1) {Arabidopsis thaliana} 1 3 3 20 At1g26880 "60S ribosomal protein L34 (RPL34A) identical to GB:Q42351, location of EST 105E2T7, gb|T22624" 1 3 3 21 At1g27080 proton-dependent oligopeptide transport (POT) family protein similar to nitrate transporter NRT1-5 [Glycine max] GI:11933414; contains Pfam profile PF00854: POT family 1 3 3 22 At1g27140 "glutathione S-transferase, putative similar to glutathione S-transferase GB: AAF22517 GI:6652870 from [Papaver somniferum] GB:AY050343." 1 3 3 23 At1g29980 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 1 3 3 24 At1g30050 hypothetical protein 1 3 3 25 At1g30220 sugar transporter family protein similar to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit) [Homo sapiens]; contains Pfam profile PF00083: major facilitator superfamily protein 1 3 4 1 At1g30280 expressed protein contains low similarity to cyclin G-associated kinase GI:1902912 SP|P97874 from [Rattus norvegicus] 1 3 4 2 At1g30490 homeobox-leucine zipper transcription factor (HB-9) identical to HD-Zip protein GB:CAA71854 GI:2145358 from [Arabidopsis thaliana] 1 3 4 3 At1g30515 expressed protein 1 3 4 4 At1g30690 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24280) [Saccharomyces cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700 come from this gene" 1 3 4 5 At1g30750 expressed protein 1 3 4 6 At1g33780 "expressed protein similar to At3g29240 [Arabidopsis thaliana]; contains Pfam profile PF02622: Uncharacterized ACR, COG1678" 1 3 4 7 At1g33830 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 (Arabidopsis thaliana); contains Pfam profile: PF00735 cell division protein (members of this family bind GTP) 1 3 4 8 At1g34000 light stress-responsive one-helix protein (OHP2) contains similarity to photosystem II 22 kDa protein GI:6006279 from [Arabidopsis thaliana] 1 3 4 9 At1g34050 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 1 3 4 10 At1g34245 expressed protein 1 3 4 11 At1g34310 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 1 3 4 12 At1g34480 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 1 3 4 13 At1g34550 expressed protein contains Pfam profile PF04765: Protein of unknown function (DUF616); expression supported by MPSS 1 3 4 14 At1g44780 expressed protein ; expression supported by MPSS 1 3 4 15 At1g44835 YbaK/prolyl-tRNA synthetase family protein contains Pfam PF04073: YbaK / prolyl-tRNA synthetases associated domain; similar to 25.7 kDa protein (GI:7271117) [Cicer arietinum] 1 3 4 16 At1g45050 ubiquitin-conjugating enzyme 15 (UBC15) E2; identical to ubiquitin-conjugating enzyme 15 GI:2801442 from [Arabidopsis thaliana] 1 3 4 17 At1g45145 thioredoxin H-type 5 (TRX-H-5) (TOUL) identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5) {Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA for thioredoxin GI:992965 1 3 4 18 At1g45474 "chlorophyll A-B binding protein, putative (LHCA5) identical to Lhca5 protein [Arabidopsis thaliana] GI:4741942; contains Pfam profile: PF00504 chlorophyll A-B binding protein; similar to light-harvesting complex protein GI:22752 from [Pinus sylvestris]" 1 3 4 19 At1g45976 expressed protein 1 3 4 20 At1g47240 "NRAMP metal ion transporter 2, putative (NRAMP2) similar to metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 1 3 4 21 At1g47290 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 1 3 4 22 At1g50240 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 4 23 At1g50300 "zinc finger (Ran-binding) family protein / RNA recognition motif (RRM)-containing protein similar to SP|Q27294 RNA-binding protein cabeza {Drosophila melanogaster}; contains Pfam profiles: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain), PF00641: Zn-finger in Ran binding protein and others" 1 3 4 24 At1g50490 ubiquitin-conjugating enzyme 20 (UBC20) nearly identical to ubiquitin-conjugating enzyme UBC20 [Arabidopsis thaliana] GI:22530867; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 1 3 4 25 At1g50570 C2 domain-containing protein low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 1 3 5 1 At1g50740 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 1 3 5 2 At1g50800 hypothetical protein 1 3 5 3 At1g51010 expressed protein 1 3 5 4 At1g51080 expressed protein 1 3 5 5 At1g53710 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 3 5 6 At1g53780 "26S proteasome AAA-ATPase subunit, putative similar to 26S proteasome AAA-ATPase subunit RPT1 SP:Q41365 from [Spinacia oleracea]" 1 3 5 7 At1g53935 hypothetical protein 1 3 5 8 At1g54000 "myrosinase-associated protein, putative similar to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216391, GI:1216389 from [Brassica napus]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; contains 1 predicted transmembrane domain" 1 3 5 9 At1g54115 "cation exchanger, putative " 1 3 5 10 At1g54170 ataxin-2-related similar to SCA2 (GI:1770390) [Homo sapiens]; similar to ataxin-2 (GI:3005020) [Mus musculus] 1 3 5 11 At1g54310 expressed protein 1 3 5 12 At1g54370 "sodium proton exchanger, putative (NHX5) contains similarity to Na+/H+ antiporter GI:1655701 from [Xenopus laevis]; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563; contains non-consensus AT-AC splice sites at introns 3 and 10" 1 3 5 13 At1g58030 amino acid permease family protein similar to SP|P18581 Low-affinity cationic amino acid transporter-2 (CAT-2) (T-cell early activation protein) {Mus musculus}; contains Pfam profile PF00324: Amino acid permease 1 3 5 14 At1g58100 "TCP family transcription factor, putative similar to auxin-induced basic helix-loop-helix transcription factor GI:5731257 from [Gossypium hirsutum]" 1 3 5 15 At1g58265 cytochrome P450-related 1 3 5 16 At1g58300 "heme oxygenase, putative similar to heme oxygenase 4 GI:14485565 from [Arabidopsis thaliana]" 1 3 5 17 At1g58480 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 3 5 18 At1g58766 hypothetical protein 1 3 5 19 At1g59560 expressed protein contains similarity to apoptosis inhibitors 1 3 5 20 At1g59610 "dynamin-like protein, putative (ADL3) strong similarity to dynamin-like protein 6 (ADL6) [Arabidopsis thaliana] GI:6651399; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain, PF00169: PH domain; identical to cDNA dynamin-like protein ADL3, GI:4803835" 1 3 5 21 At1g62540 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase GB:AAA21178 GI:349534 from Oryctolagus cuniculus [SP|P32417], SP|P97501 from Mus musculus; contains Pfam profile PF00743 Flavin-binding monooxygenase-like" 1 3 5 22 At1g62610 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 1 3 5 23 At1g62780 expressed protein 1 3 5 24 At1g62800 "aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana]" 1 3 5 25 At1g62960 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to GI:1173638 [GB:U35779] from [Triticum aestivum] (Plant Mol. Biol. 31 (5), 1009-1020 (1996)), GI:1813331 from Vigna radiata" 1 3 6 1 At1g63010 SPX (SYG1/Pho81/XPR1) domain-containing protein contains Pfam profile PF03105: SPX domain 1 3 6 2 At1g63160 "replication factor C 40 kDa, putative similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit (Replication factor C 40 kDa subunit, A1 40 kDa subunit, RF-C 40 kDa subunit, RFC40) [Mus musculus]" 1 3 6 3 At1g63210 hypothetical protein contains Pfam profile: PF04283 protein of unknown function (DUF439) 1 3 6 4 At1g65960 glutamate decarboxylase 2 (GAD 2) similar to glutamate decarboxylase (gad) GI:294111 from [Petunia hybrida] 1 3 6 5 At1g66020 terpene synthase/cyclase family protein contains Pfam profile: PF01397: Terpene synthase family 1 3 6 6 At1g66160 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 1 3 6 7 At1g66220 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa]; contains Pfam profiles: PF00082 Subtilase family (3 copies) 1 3 6 8 At1g66380 myb family transcription factor (MYB114) similar to myb-related protein An2 GI:7673090 from [Petunia x hybrida] 1 3 6 9 At1g66440 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 1 3 6 10 At1g66600 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 3 6 11 At1g66660 "seven in absentia (SINA) protein, putative similar to SIAH2 protein [Brassica napus var. napus] GI:7657878; contains Pfam profile PF03145: Seven in absentia protein family" 1 3 6 12 At1g69325 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 1 3 6 13 At1g69380 expressed protein predicated by genscan+ 1 3 6 14 At1g69510 expressed protein 1 3 6 15 At1g69540 MADS-box family protein contains Pfam profile: PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 1 3 6 16 At1g69720 heme oxygenase 3 (HO3) similar to heme oxygenase 3 [Arabidopsis thaliana] gi|14485563|gb|AAK63006 1 3 6 17 At1g69780 homeobox-leucine zipper protein 13 (HB-13) / HD-ZIP transcription factor 13 identical to homeobox gene 13 protein (GP:12325190) [Arabidopsis thaliana] 1 3 6 18 At1g69960 serine/threonine protein phosphatase PP2A-5 catalytic subunit (PP2A5) identical to SP|O04951|P2A5_ARATH Serine/threonine protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 1 3 6 19 At1g70030 paired amphipathic helix repeat-containing protein similar to Sin3 protein [Yarrowia lipolytica] GI:18076824; contains Pfam profile PF02671: Paired amphipathic helix repeat 1 3 6 20 At1g72830 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 1 3 6 21 At1g72870 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 1 3 6 22 At1g73050 "(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|52707]; contains Pfam protile PF00732 GMC oxidoreductase" 1 3 6 23 At1g73120 expressed protein 1 3 6 24 At1g73260 trypsin and protease inhibitor family protein / Kunitz family protein similar to trypsin inhibitor propeptide [Brassica oleracea] GI:841208; contains Pfam profile PF00197: Trypsin and protease inhibitor 1 3 6 25 At1g73320 expressed protein 1 3 7 1 At1g73480 "hydrolase, alpha/beta fold family protein low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 7 2 At1g73550 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 3 7 3 AT5G57480 PC-1 C12 1 3 7 4 3XSSC PC-1 C24 1 3 7 5 AT1G29930 PC-1 G12 1 3 7 6 3XSSC PC-1 G24 1 3 7 7 AT3G44150 PC-1 K12 1 3 7 8 3XSSC PC-1 K24 1 3 7 9 AT4G00810 PC-1 O12 1 3 7 10 3XSSC PC-1 O24 1 3 7 11 At1g76380 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 1 3 7 12 At1g76410 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 7 13 At1g76550 "pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative strong similarity to SP|Q41140 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (PPI-PFK) {Ricinus communis}; contains Pfam profile PF00365: Phosphofructokinase" 1 3 7 14 At1g76610 "hypothetical protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 3 7 15 At1g76780 expressed protein ; expression supported by MPSS 1 3 7 16 At1g76830 F-box family protein contains F-box domain Pfam:PF00646 1 3 7 17 At1g76960 expressed protein 1 3 7 18 At1g77000 F-box family protein similar to GP|21554029| F-box protein AtFBL5 from [Arabidopsis thaliana]; similar to F-box protein FBL2 GI:6063090 from [Homo sapiens] 1 3 7 19 At1g79650 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 1 3 7 20 At1g79690 MutT/nudix family protein contains Pfam NUDIX domain [PF00293]; very low similarity to Chain A and Chain B of Escherichia coli isopentenyl diphosphate:dimethylallyl diphosphate isomerase [gi:15826361] [gi:15826360] 1 3 7 21 At1g79830 expressed protein weak similarity to TATA element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo sapiens] 1 3 7 22 At1g79880 La domain-containing protein contains Pfam profile PF05383: La domain; similar to putative protein GB:CAA18589 [Arabidopsis thaliana] 1 3 7 23 At1g80000 expressed protein identical to unknown protein GB:AAD55481 [Arabidopsis thaliana] 1 3 7 24 At1g80050 adenine phosphoribosyltransferase 2 (APT2) identical to SP|Q42563 Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana} 1 3 7 25 At1g80230 "cytochrome c oxidase family protein contains Pfam domain, PF01215: Cytochrome c oxidase subunit Vb" 1 3 8 1 At1g80270 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat" 1 3 8 2 At2g03140 CAAX amino terminal protease family protein very low similarity to SP|Q40863 Late embryogenesis abundant protein EMB8 from Picea glauca; contains Pfam profile PF02517 CAAX amino terminal protease family protein 1 3 8 3 At2g03200 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 3 8 4 At2g03380 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 8 5 At2g03450 purple acid phosphatase (PAP9) identical to purple acid phosphatase [Arabidopsis thaliana] GI:20257481; contains Pfam profile: PF00149 calcineurin-like phosphoesterase; contains metallo-phosphoesterase motif (PS50185) 1 3 8 6 At2g03620 "magnesium transporter CorA-like family protein (MRS2-5) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein; supporting cDNA gi|25360881|gb|AY150290.1|" 1 3 8 7 At2g03710 MADS-box protein (AGL3) 1 3 8 8 At2g03870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] SWISS-PROT:Q9UK45" 1 3 8 9 At2g03930 hypothetical protein 1 3 8 10 At2g07727 "cytochrome b (MTCYB) (COB) (CYTB) contains Pfam profile PF00033: Cytochrome b(N-terminal)/b6/petB; ontains Pfam profile PF00032: Cytochrome b(C-terminal)/b6/petD; 99% identical to apocytochrome B (GI:6851014), cytochrome b (GI:402962), and Cytochrome b (Swiss-Prot:P42792) [Arabidopsis thaliana]" 1 3 8 11 At2g07739 expressed protein 1 3 8 12 At2g09990 40S ribosomal protein S16 (RPS16A) Same as GB:Q42340 1 3 8 13 At2g10090 hypothetical protein 1 3 8 14 At2g10555 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 1 3 8 15 At2g10870 hypothetical protein 1 3 8 16 At2g11345 "hypothetical protein similar to At3g42690, At4g04130" 1 3 8 17 At2g11520 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 8 18 At2g16380 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to phosphatidylinositol transfer-like protein III (GI:14486705) [Lotus japonicus]" 1 3 8 19 At2g16430 purple acid phosphatase (PAP10) identical to purple acid phosphatase (PAP10) GI:20257482 from [Arabidopsis thaliana] 1 3 8 20 At2g16587 expressed protein 1 3 8 21 At2g16650 expressed protein 1 3 8 22 At2g16860 GCIP-interacting family protein similar to GCIP-interacting protein mp29 (GI:27372623) [Mus musculus]; similar to GCIP-interacting protein P29 (GI:11967379) [Homo sapiens] 1 3 8 23 At2g16900 expressed protein 1 3 8 24 At2g17036 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 8 25 At2g17080 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 1 3 9 1 At2g19930 "RNA-dependent RNA polymerase family protein contains Pfam domain, PF05183: RNA dependent RNA polymerase" 1 3 9 2 At2g19970 "pathogenesis-related protein, putative similar to pathogenesis-related protein 1 {Arabidopsis thaliana} GI:166805; contains Pfam profile PF00188: SCP-like extracellular protein" 1 3 9 3 At2g20140 "26S protease regulatory complex subunit 4, putative similar to Swiss-Prot:P48601 26S protease regulatory subunit 4 (P26S4) [Drosophila melanogaster]" 1 3 9 4 At2g20180 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 1 3 9 5 At2g20380 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 9 6 At2g20440 RabGAP/TBC domain-containing protein similar to SP|P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains Pfam profile PF00566: TBC domain 1 3 9 7 At2g20585 expressed protein 1 3 9 8 At2g20610 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 1 3 9 9 At2g23260 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 9 10 At2g23320 WRKY family transcription factor identical to WRKY DNA-binding protein 15 GI:13506742 from [Arabidopsis thaliana] 1 3 9 11 At2g23520 expressed protein ; expression supported by MPSS 1 3 9 12 At2g23560 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 9 13 At2g23755 expressed protein 1 3 9 14 At2g23810 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 1 3 9 15 At2g23990 plastocyanin-like domain-containing protein 1 3 9 16 At2g24030 expressed protein and genefinder 1 3 9 17 At2g26870 phosphoesterase family protein low similarity to SP|Q9RGS8 Non-hemolytic phospholipase C precursor (EC 3.1.4.3) (Phosphatidylcholine cholinephosphohydrolase) {Burkholderia pseudomallei}; contains Pfam profile PF04185: Phosphoesterase family 1 3 9 18 At2g26930 "4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (CDPMEK) identical to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase)(CDPMEK) [Arabidopsis thaliana] SWISS-PROT:O81014" 1 3 9 19 At2g27060 "leucine-rich repeat transmembrane protein kinase, putative " 1 3 9 20 At2g27100 C2H2 zinc-finger protein SERRATE (SE) identical to C2H2 zinc-finger protein SERRATE GI:14486602 from [Arabidopsis thaliana] 1 3 9 21 At2g27260 expressed protein 1 3 9 22 At2g27310 F-box family protein contains Pfam PF00646: F-box domain;; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 9 23 At2g27450 "carbon-nitrogen hydrolase family protein low similarity to beta-alanine synthase [Drosophila melanogaster] GI:14334063; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 1 3 9 24 At2g27490 dephospho-CoA kinase family similar to Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase). (Swiss-Prot:Q92BF2) [Listeria innocua]; contains Pfam profile PF01121: Dephospho-CoA kinase 1 3 9 25 At2g30250 WRKY family transcription factor 1 3 10 1 At2g30310 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 3 10 2 At2g30470 transcriptional factor B3 family protein low similarity to FUSCA3 [Arabidopsis thaliana] GI:3582518; contains Pfam profile PF02362: B3 DNA binding domain 1 3 10 3 At2g30505 Expressed protein 1 3 10 4 At2g30650 "3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein" 1 3 10 5 At2g30695 expressed protein 1 3 10 6 At2g30870 "glutathione S-transferase, putative supported by cDNA GI:443698 GB:D17673" 1 3 10 7 At2g30930 expressed protein 1 3 10 8 At2g33500 zinc finger (B-box type) family protein 1 3 10 9 At2g33550 gt-2-related weak similarity to gt-2 (GI:20249) [Oryza sativa] 1 3 10 10 At2g33720 expressed protein 1 3 10 11 At2g33750 "purine permease, putative (PUP2) similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profiles PF03151: Domain of unknown function, DUF250, PF00892: Integral membrane protein; identical to cDNA putative purine permease (PUP2) mRNA, partial cds GI:14388590" 1 3 10 12 At2g33845 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 1 3 10 13 At2g33980 MutT/nudix family protein similar to coenzyme A diphosphatase [Mus musculus] GI:12746410; contains Pfam profile PF00293: NUDIX domain 1 3 10 14 At2g34120 hypothetical protein 1 3 10 15 At2g34190 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 1 3 10 16 At2g36780 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 10 17 At2g36835 expressed protein 1 3 10 18 At2g36980 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 10 19 At2g37025 pathogen-responsive DNA-binding protein-related contains weak similarity to BPF-1 (GI:441310) [Petroselinum crispum] 1 3 10 20 At2g37150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 10 21 At2g37200 "integral membrane protein, putative contains 4 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 1 3 10 22 At2g37370 hypothetical protein 1 3 10 23 At2g37420 kinesin motor protein-related 1 3 10 24 At2g40020 expressed protein 1 3 10 25 At2g40070 expressed protein 1 3 11 1 At2g40170 Em-like protein GEA6 (EM6) identical toSP|Q02973 Em-like protein GEA6 {Arabidopsis thaliana}; contains Pfam profile PF00477: Small hydrophilic plant seed protein 1 3 11 2 At2g40220 abscisic acid-insensitive 4 (ABI4) identical to AP2 domain transcription factor ABI4 GI:4587996 from [Arabidopsis thaliana]; sucrose uncoupled-6 (sun6) mutation PMID: 10972884 1 3 11 3 At2g40390 expressed protein 1 3 11 4 At2g40420 amino acid transporter family protein similar to neuronal glutamine transporter [Rattus norvegicus] GI:6978016; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 1 3 11 5 At2g40580 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 11 6 At2g40640 expressed protein 1 3 11 7 At2g43180 expressed protein 1 3 11 8 At2g43220 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 11 9 At2g43410 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 3 11 10 At2g43460 60S ribosomal protein L38 (RPL38A) 1 3 11 11 At2g43630 expressed protein 1 3 11 12 At2g43670 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 1 3 11 13 At2g43840 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 11 14 At2g43890 "polygalacturonase, putative / pectinase, putative similar to SP|P48979 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus persica}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 3 11 15 At2g46510 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 11 16 At2g46560 "transducin family protein / WD-40 repeat family protein similar to CPY (GI:3096961) {Chironomus thummi}; contains Pfam PF00400: WD domain, G-beta repeat (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499" 1 3 11 17 At2g46735 expressed protein 1 3 11 18 At2g46790 "pseudo-response regulator 9 (APRR9) / timing of CAB expression 1-like protein (TL1) identical to pseudo-response regulator 9 GI:10281000 from [Arabidopsis thaliana], timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA timing of CAB expression 1-like protein GI:9247021" 1 3 11 19 At2g46915 expressed protein and genscan 1 3 11 20 At2g46970 "basic helix-loop-helix (bHLH) protein, putative similar to PIF3 like basic Helix Loop Helix protein (PIL1) [Arabidopsis thaliana] GI:22535492; contains Myc-type, 'helix-loop-helix' dimerization domain signature, PROSITE:PS00038" 1 3 11 21 At2g47130 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 1 3 11 22 At2g47190 myb family transcription factor (MYB2) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 3 11 23 At3g02500 expressed protein 1 3 11 24 At3g02540 "ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain;" 1 3 11 25 At3g02690 integral membrane family protein similar to PecM protein (GI:5852331) {Vogesella indigofera} and PecM protein (SP:P42194) [Erwinia chrysanthemi] 1 3 12 1 At3g02750 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 1 3 12 2 At3g02900 expressed protein 1 3 12 3 At3g02960 copper-binding protein-related low similarity to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 1 3 12 4 At3g03140 expressed protein 1 3 12 5 At3g03200 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) {Arabidopsis thaliana} 1 3 12 6 At3g05750 expressed protein 1 3 12 7 At3g05810 expressed protein 1 3 12 8 At3g05970 "long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase (LACS6) strong similarity to AMP-binding protein (MF39P) gi:1617274 from Brassica napus, similar to putative long-chain-fatty-acid--CoA ligase (brain isozyme) GB:P33124 [Rattus norvegicus]; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA AtLACS6 for long-chain acyl-CoA synthetase GI:22531705" 1 3 12 9 At3g06020 expressed protein ; expression supported by MPSS 1 3 12 10 At3g06140 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 1 3 12 11 At3g06190 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain 1 3 12 12 At3g06360 arabinogalactan-protein (AGP27) 1 3 12 13 At3g06420 "autophagy 8h (APG8h) identical to autophagy 8h [Arabidopsis thaliana] GI:19912165; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3; supporting cDNA gi|19912164|dbj|AB073182.1|" 1 3 12 14 At3g09350 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 12 15 At3g09410 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase 1 3 12 16 At3g09580 "amine oxidase family protein low similarity to SP|P28553 Phytoene dehydrogenase, chloroplast precursor (Phytoene desaturase) from Glycine max; contains Pfam profile PF01593 amine oxidase, flavin-containing" 1 3 12 17 At3g09650 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 12 18 At3g09800 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 1 3 12 19 At3g09840 cell division cycle protein 48 (CDC48A) (CDC48) identical to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana} 1 3 12 20 At3g10000 DNA-binding protein-related similar to GT-2 factor [Arabidopsis thaliana GI:416490 1 3 12 21 At3g10060 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans isomerases" 1 3 12 22 At3g12440 extensin family protein contains similarity to Swiss-Prot:Q38913 extensin 1 precursor (AtExt1) (AtExt4) [Arabidopsis thaliana] 1 3 12 23 At3g12500 basic endochitinase identical to basic endochitinase precursor SP:P19171 from [Arabidopsis thaliana] 1 3 12 24 At3g12670 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 1 3 12 25 At3g12710 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 1 3 13 1 At3g12890 expressed protein 1 3 13 2 At3g12950 expressed protein 1 3 13 3 At3g13065 "leucine-rich repeat transmembrane protein kinase, putative leucine-rich repeat transmembrane protein kinase 1 GB:AAC27894 from [Zea mays]" 1 3 13 4 At3g13100 ABC transporter family protein similar to ATP-binding cassette transporter MRP8 GI:18031899 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter 1 3 13 5 At3g15440 expressed protein 1 3 13 6 At3g15500 no apical meristem (NAM) family protein (NAC3) identical to AtNAC3 [Arabidopsis thaliana] GI:12060424; contains Pfam PF02365: No apical meristem (NAM) domain; similar to jasmonic acid 2 GB:AAF04915 from [Lycopersicon esculentum] 1 3 13 7 At3g15660 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 1 3 13 8 At3g15700 "disease resistance protein, putative similar to NBS/LRR disease resistance protein [Arabidopsis thaliana] gi|3309619|gb|AAC26125; contains Pfam profile: PF00931 NB-ARC domain" 1 3 13 9 At3g15880 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies)" 1 3 13 10 At3g15920 phox (PX) domain-containing protein weak similarity to myosin heavy chain [Rana catesbeiana] GI:4249699; contains Pfam profile PF00787: PX domain 1 3 13 11 At3g16080 60S ribosomal protein L37 (RPL37C) similar to ribosomal protein L37 GB:BAA04888 from [Homo sapiens] 1 3 13 12 At3g16140 "photosystem I reaction center subunit VI, chloroplast, putative / PSI-H, putative (PSAH1) identical to SP|Q9SUI7; similar to PSI-H precursor [Nicotiana sylvestris] GI:407353; contains Pfam profile PF03244: Photosystem I reaction centre subunit VI" 1 3 13 13 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 3 13 14 At3g18830 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 1 3 13 15 At3g18980 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 1 3 13 16 At3g19030 expressed protein contains similarity to phosphoserine aminotransferase GB:P19689 from [Yersinia enterocolitica] 1 3 13 17 At3g19190 expressed protein 1 3 13 18 At3g19250 hypothetical protein 1 3 13 19 At3g19410 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to hypothetical protein GB:AAC69119 from [Arabidopsis thaliana] 1 3 13 20 At3g19470 F-box family protein contains F-box domain Pfam:PF00646 1 3 13 21 At3g22190 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 3 13 22 At3g22235 expressed protein 1 3 13 23 At3g22415 expressed protein 1 3 13 24 At3g22425 imidazoleglycerol-phosphate dehydratase 1 (IGPD1) identical to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; supporting cDNA gi|437212|gb|U02689.1|ATU02689 1 3 13 25 At3g22560 GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile:PF00583 Acetyltransf:Acetyltransferase (GNAT) family 1 3 14 1 At3g22630 "20S proteasome beta subunit D (PBD1) (PRGB) identical to GB:CAA74026 from [Arabidopsis thaliana] ( FEBS Lett. (1997) 416 (3), 281-285); identical to cDNA proteasome subunit prgb GI:2511589" 1 3 14 2 At3g22810 expressed protein ; expression supported by MPSS 1 3 14 3 At3g22860 "eukaryotic translation initiation factor 3 subunit 8, putative / eIF3c, putative similar to eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) [Arabidopsis thaliana] SWISS-PROT:O49160" 1 3 14 4 At3g25760 early-responsive to dehydration stress protein (ERD12) nearly identical to early-responsive to dehydration (ERD12) protein [GI:15320414]; similar to allene oxide cyclase GI:8977961 from [Lycopersicon esculentum]; identical to cDNA ERD12 partial cds GI:15320413 1 3 14 5 At3g25810 "myrcene/ocimene synthase, putative similar to GI:9957293; contains Pfam profile: PF01397 terpene synthase family" 1 3 14 6 At3g25940 transcription factor S-II (TFIIS) domain-containing protein similar to SP|O94703 DNA-directed RNA polymerase I 13.1 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profile PF01096: Transcription factor S-II (TFIIS) 1 3 14 7 At3g26000 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 14 8 At3g26130 glycosyl hydrolase family 5 protein / cellulase family protein contains Pfam profile: PF00150 cellulase (glycosyl hydrolase family 5) 1 3 14 9 At3g26180 "cytochrome P450 71B20, putative (CYP71B2) identical to cytochrome P450 71B20 (SP:Q9LTM3) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 1 3 14 10 At3g26350 expressed protein ; expression supported by MPSS 1 3 14 11 At3g26410 expressed protein 1 3 14 12 At3g29100 vesicle transport v-SNARE 13 (VTI13) / vesicle soluble NSF attachment protein receptor 13 identical to identical to Vesicle transport v-SNARE 13 (SP:Q9LVP9) {Arabidopsis thaliana}; similar to v-snare AtVTI1a (GI:6690274) (GB:AAF24061) [Arabidopsis thaliana] 1 3 14 13 At3g29160 Snf1-related protein kinase (KIN11) identical to protein kinase AKin11 GI:1729444 from [Arabidopsis thaliana] 1 3 14 14 At3g29270 expressed protein 1 3 14 15 At3g29320 "glucan phosphorylase, putative similar to alpha-glucan phosphorylase, L isozyme 1 precursor GB:P04045 from [Solanum tuberosum] (J. Biochem. 106 (4), 691-695 (1989))" 1 3 14 16 At3g29560 hypothetical protein 1 3 14 17 At3g29610 hypothetical protein 1 3 14 18 At3g29785 hypothetical protein 1 3 14 19 At3g29796 hypothetical protein 1 3 14 20 At3g43900 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 3 14 21 At3g43960 "cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 1 3 14 22 At3g44130 F-box family protein contains F-box domain Pfam:PF00646 1 3 14 23 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein low similarity to dihydrolipoamide dehydrogenase from Clostridium magnum [GI:472330]; contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 1 3 14 24 At3g44370 expressed protein weak similarity to AtOXA1 [Arabidopsis thaliana] GI:6624207 1 3 14 25 At3g44460 basic leucine zipper transcription factor (BZIP67) identical to basic leucine zipper transcription factor GI:18656053 from [Arabidopsis thaliana]; identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052 1 3 15 1 At3g44620 low molecular weight phosphotyrosine protein phosphatase family protein contains Pfam profile: PF01451 low molecular weight phosphotyrosine protein phosphatase 1 3 15 2 At3g44690 expressed protein 1 3 15 3 At3g47530 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 15 4 At3g47570 "leucine-rich repeat transmembrane protein kinase, putative protein kinase Xa21 - Oryza sativa, PIR:A57676" 1 3 15 5 At3g47740 "ABC transporter family protein ATP binding cassette transporter ABC1, Homo sapiens, PIR2:A54774" 1 3 15 6 At3g47800 aldose 1-epimerase family protein similar to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149] from [Acinetobacter calcoaceticus]; contains Pfam profile PF01263 Aldose 1-epimerase 1 3 15 7 At3g47960 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 3 15 8 At3g48020 expressed protein 1 3 15 9 At3g48170 "betaine-aldehyde dehydrogenase, putative similar to betaine-aldehyde dehydrogenase, chloroplast precursor (BADH) [Arabidopsis thaliana] SWISS-PROT:Q9S795" 1 3 15 10 At3g48210 expressed protein 1 3 15 11 At3g51100 expressed protein 1 3 15 12 At3g51160 "GDP-D-mannose-4,6-dehydratase (MUR1) almost identical to GDP-D-mannose-4,6-dehydratase (MUR1) GI:1764100 from [Arabidopsis thaliana]" 1 3 15 13 At3g51340 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 1 3 15 14 At3g51390 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 1 3 15 15 At3g51570 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 15 16 At3g51620 expressed protein 1 3 15 17 At3g51770 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 1 3 15 18 At3g51810 Em-like protein GEA1 (EM1) identical to SP|Q07187 Em-like protein GEA1 (EM1) {Arabidopsis thaliana}; contains Pfam profile PF00477: Small hydrophilic plant seed protein 1 3 15 19 At3g54320 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 1 3 15 20 At3g54380 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 1 3 15 21 At3g54520 hypothetical protein 1 3 15 22 At3g54580 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 3 15 23 At3g54760 "dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor (Dentin phosphophoryn DPP, Dentin sialoprotein DSP) [Homo sapiens]" 1 3 15 24 At3g54820 "aquaporin, putative similar to plasma membrane aquaporin GI:3551133 from [Raphanus sativus]" 1 3 15 25 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 1 3 16 1 At3g54970 expressed protein 1 3 16 2 At3g57800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supported by full-length cDNA gi:20127059 1 3 16 3 At3g57850 hypothetical protein 1 3 16 4 At3g58030 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 16 5 At3g58100 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum]; C-terminal homology only 1 3 16 6 At3g58280 hypothetical protein 1 3 16 7 At3g58340 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 3 16 8 At3g58500 serine/threonine protein phosphatase PP2A-4 catalytic subunit (PP2A4) identical to SP|P48578 Serine/threonine protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) (Protein phosphatase 2A isoform 4) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 1 3 16 9 At3g58560 endonuclease/exonuclease/phosphatase family protein similar to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 3 16 10 At3g61280 expressed protein ; expression supported by MPSS 1 3 16 11 At3g61350 "SKP1 interacting partner 4 (SKIP4) almost idential to SKP1 interacting partner 4 GI:10716953 from [Arabidopsis thaliana], 42 aa extension at N-terminal; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 3 16 12 At3g61500 hypothetical protein 1 3 16 13 At3g61550 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 16 14 At3g61710 autophagy protein Apg6 family contains weak similarity to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam profile PF04111: Autophagy protein Apg6 1 3 16 15 At3g61760 "dynamin-like protein B (DL1B) identical to dynamin-like protein B [Arabidopsis thaliana] GI:27543504; strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 1 3 16 16 At3g61910 "no apical meristem (NAM) family protein no apical meristem (NAM) - Petunia hybrida, EMBL:PHDNANAM" 1 3 16 17 At3g61950 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 16 18 At4g00905 expressed protein 1 3 16 19 At4g00955 expressed protein 1 3 16 20 At4g01100 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 3 16 21 At4g01160 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 1 3 16 22 At4g01310 "ribosomal protein L5 family protein contains Pfam profiles PF00673: ribosomal L5P family C-terminus, PF00281: ribosomal protein L5" 1 3 16 23 At4g01370 "mitogen-activated protein kinase, putative / MAPK, putative (MPK4) identical to mitogen-activated protein kinase homolog (AtMPK4)[Arabidopsis thaliana] SWISS-PROT:Q39024; PMID:12119167" 1 3 16 24 At4g01525 expressed protein 1 3 16 25 At4g01570 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 17 1 At4g04400 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 1 3 17 2 At4g04470 peroxisomal membrane protein 22 kDa (PMP22) identical to peroxisomal membrane protein [Arabidopsis thaliana] gi|3980254|emb|CAA06834 1 3 17 3 At4g04670 "Met-10+ like family protein / kelch repeat-containing protein contains Pfam profiles PF01344: Kelch motif, PF02475: Met-10+ like-protein" 1 3 17 4 At4g04720 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase(CDPK) [Carrot] SWISS-PROT:P28582" 1 3 17 5 At4g04885 pre-mRNA cleavage complex-related contains weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens] 1 3 17 6 At4g04930 "fatty acid desaturase family protein similar to D. melanogaster Des-1 protein, GenBank accession number X94180; contains Pfam profile PF00487 Fatty acid desaturase domain" 1 3 17 7 At4g05070 expressed protein 1 3 17 8 At4g05120 "equilibrative nucleoside transporter, putative (ENT3) identical to putative equilibrative nucleoside transporter ENT3 [Arabidopsis thaliana] GI:16518993; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter" 1 3 17 9 At4g09840 expressed protein 1 3 17 10 At4g09900 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393, SP|Q40708 PIR7A protein {Oryza sativa}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 17 11 At4g10040 "cytochrome c, putative similar to cytochrome c [Pumpkin, Winter squash] SWISS-PROT:P00051" 1 3 17 12 At4g10100 "molybdenum cofactor synthesis family protein similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) [Homo sapiens]; contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; contains Pfam PF02597: ThiS family" 1 3 17 13 At4g10240 "zinc finger (B-box type) family protein zinc-finger protein R2931, Oryza sativa, PIR3:JE0116" 1 3 17 14 At4g10290 hypothetical protein 1 3 17 15 At4g10450 "60S ribosomal protein L9 (RPL90D) ribosomal protein L9, cytosolic - garden pea, PIR2:S19978" 1 3 17 16 At4g10520 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 1 3 17 17 At4g13300 "terpene synthase/cyclase family protein predicted terpene synthase TS1, Arabidopsis thaliana, Y11188" 1 3 17 18 At4g13345 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 1 3 17 19 At4g13500 expressed protein 1 3 17 20 At4g13540 expressed protein 1 3 17 21 At4g13710 pectate lyase family protein 1 3 17 22 At4g13750 expressed protein 1 3 17 23 At4g13870 Werner Syndrome-like exonuclease (WEX) contains Pfam profile PF01612: 3'-5' exonuclease; identical to Werner Syndrome-like exonuclease [Arabidopsis thaliana] GP:28195109 gb:AAO33765 1 3 17 24 At4g13940 adenosylhomocysteinase / S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH) identical to SP|O23255 Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) {Arabidopsis thaliana}; strong similarity to SP|P50248 Adenosylhomocysteinase (EC 3.3.1.1) {Nicotiana sylvestris} 1 3 17 25 At4g16280 "flowering time control protein / FCA gamma (FCA) identical to SP|O04425 Flowering time control protein FCA {Arabidopsis thaliana}; four alternative splice variants, one splicing isoform contains a non-consensus CA donor splice site, based on cDNA: gi:2204090" 1 3 18 1 At4g16350 calcineurin B-like protein 6 (CBL6) identical to calcineurin B-like protein 6 (GI:11065943) [Arabidopsis thaliana] 1 3 18 2 At4g16500 cysteine protease inhibitor family protein / cystatin family protein similar to SP|Q06445 Cysteine proteinase inhibitor (Cystatin) {Vigna unguiculata}; contains Pfam profile PF00031: Cystatin domain 1 3 18 3 At4g16530 expressed protein contains Pfam profile PF04510: Family of unknown function (DUF577) 1 3 18 4 At4g16690 "esterase/lipase/thioesterase family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393, SP|Q40708 PIR7A protein {Oryza sativa}; contains Interpro entry IPR000379" 1 3 18 5 At4g16710 glycosyltransferase family protein 28 low similarity to C terminus subunit of GlcA transferase from Escherichia coli [GI:2586169]; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain 1 3 18 6 At4g16835 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 18 7 At4g16860 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 18 8 At4g19450 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 1 3 18 9 At4g19510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 18 10 At4g19660 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 1 3 18 11 At4g19700 expressed protein 1 3 18 12 At4g19870 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 18 13 At4g19930 "F-box family protein similar to F-box protein family, AtFBX8 (GI:20197464) {Arabidopsis thaliana}; contains Pfam PF00646: F-box domain" 1 3 18 14 At4g20080 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 1 3 18 15 At4g20140 "leucine-rich repeat transmembrane protein kinase, putative Cf-2.2, Lycopersicon pimpinellifolium, PIR:T10515" 1 3 18 16 At4g22920 expressed protein 1 3 18 17 At4g22980 expressed protein ; expression supported by MPSS 1 3 18 18 At4g23150 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 3 18 19 At4g23210 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 3 18 20 At4g23350 "expressed protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 1 3 18 21 At4g23410 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 1 3 18 22 At4g23550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA binding domain 1 3 18 23 At4g23600 "coronatine-responsive tyrosine aminotransferase / tyrosine transaminase similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II; identical to cDNA coronatine-regulated tyrosine aminotransferase (F9D16.70) GI:15076852" 1 3 18 24 At4g26170 expressed protein 1 3 18 25 At4g26210 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 1 3 19 1 At4g26380 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 19 2 At4g26420 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to caffeine synthase [Camellia sinensis][GI:9967143], defense-related protein cjs1 [Brassica carinata][GI:14009292], S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase [Clarkia breweri][GI:6002712]" 1 3 19 3 At4g26570 calcineurin B-like protein 3 (CBL3) identical to calcineurin B-like protein 3 (GI:22136404) [Arabidopsis thaliana] 1 3 19 4 At4g26610 "protein kinase, putative similar to protein kinase G11A [Oryza sativa] SWISS-PROT:P47997" 1 3 19 5 At4g26760 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 3 19 6 At4g26820 hypothetical protein 1 3 19 7 At4g29400 expressed protein ; expression supported by MPSS 1 3 19 8 At4g29460 "phospholipase A2 gamma, secretory low molecular weight identical to secretory low molecular weight phospholipase A2 gamma [Arabidopsis thaliana] GI:26006457; contains INTERPRO domain IPR001211 phospholipase A2" 1 3 19 9 At4g29640 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 5 (CDA5) [Arabidopsis thaliana] GI:3818578, cytidine deaminase homolog DesG [Arabidopsis thaliana] GI:4836449; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 1 3 19 10 At4g29680 type I phosphodiesterase/nucleotide pyrophosphatase family protein similar to SP|P06802 Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (EC 3.6.1.9) {Mus musculus}; contains Pfam profile PF01663: Type I phosphodiesterase / nucleotide pyrophosphatase 1 3 19 11 At4g29840 "threonine synthase, chloroplast identical to SP|Q9S7B5 Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}" 1 3 19 12 At4g29880 "leucine-rich repeat family protein contains leucine rich repeats, Pfam:PF00560" 1 3 19 13 At4g30050 expressed protein ; expression supported by MPSS 1 3 19 14 At4g30110 "ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein / heavy-metal-associated domain-containing protein similar to cadmium efflux pump protein from Geobacillus stearothermophilus [GI:16753175], cadmium resistance protein B from Staphylococcus aureus [GI:14020985]" 1 3 19 15 At4g32590 ferredoxin-related contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domain 1 3 19 16 At4g32630 hypothetical protein 1 3 19 17 At4g32810 "dioxygenase-related low similarity to b,b-carotene-9',10'-dioxygenase [Mus musculus] GI:12666529; contains Pfam profile PF03055: Retinal pigment epithelial membrane protein" 1 3 19 18 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 1 3 19 19 At4g32980 homeobox protein (ATH1) identical to SWISS-PROT:P48731 homeobox protein ATH1. [Arabidopsis thaliana] 1 3 19 20 At4g33030 UDP-sulfoquinovose synthase / sulfite:UDP-glucose sulfotransferase / sulfolipid biosynthesis protein (SQD1) identical to gi:2736155 1 3 19 21 At4g33200 "myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]" 1 3 19 22 At4g33260 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); WD-repeat protein -Daucus carota, PID:g2253631" 1 3 19 23 AT5G57480 PC-1 C12 1 3 19 24 3XSSC PC-1 C24 1 3 19 25 AT1G29930 PC-1 G12 1 3 20 1 3XSSC PC-1 G24 1 3 20 2 AT3G44150 PC-1 K12 1 3 20 3 3XSSC PC-1 K24 1 3 20 4 AT4G00810 PC-1 O12 1 3 20 5 3XSSC PC-1 O24 1 3 20 6 At4g35820 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 3 20 7 At4g35880 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 1 3 20 8 At4g36030 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 20 9 At4g36060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 20 10 At4g36210 expressed protein contains Pfam PF05277: Protein of unknown function (DUF726) 1 3 20 11 At4g36270 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Mus musculus] GI:5410255; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 1 3 20 12 At4g36460 hypothetical protein 1 3 20 13 At4g36515 expressed protein 1 3 20 14 At4g39170 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and phosphatidylinositol-phosphatidylcholine transfer protein SEC14, Yarrowia lipolytica, PIR2:S43745;contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 1 3 20 15 At4g39230 "isoflavone reductase, putative similar to allergenic isoflavone reductase-like protein Bet v 6.0102 [Betula pendula][GI:10764491]; contains Pfam profile PF02716: Isoflavone reductase" 1 3 20 16 At4g39330 "mannitol dehydrogenase, putative nearly identical to SP|P42734, probable mannitol dehydrogenase" 1 3 20 17 At4g39370 "ubiquitin-specific protease 27, putative (UBP27) similar to GI:11993494; ubiquitin specific protease 66 - Gallus gallus,PID:g3800764" 1 3 20 18 At4g39540 shikimate kinase family protein similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202 1 3 20 19 At4g39570 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 20 20 At4g39740 "electron transport SCO1/SenC family protein similar to SP|P23833 SCO1 protein, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF02630: SCO1/SenC" 1 3 20 21 At4g39770 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 1 3 20 22 At5g03310 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 1 3 20 23 At5g03360 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 20 24 At5g03500 transcriptional co-activator-related low similarity to transcriptional co-activator CRSP33 [Homo sapiens] GI:4220890 1 3 20 25 At5g03550 hypothetical protein 1 3 21 1 At5g03720 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 1 3 21 2 At5g03780 expressed protein 1 3 21 3 At5g03950 hypothetical protein 1 3 21 4 At5g04010 expressed protein 1 3 21 5 At5g06590 expressed protein 1 3 21 6 At5g06650 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 1 3 21 7 At5g06810 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 3 21 8 At5g06870 "polygalacturonase inhibiting protein 2 (PGIP2) identical to polygalacturonase inhibiting protein 2 (PGIP2) [Arabidopsis thaliana] gi|7800201|gb|AAF69828; contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 1 3 21 9 At5g07030 aspartyl protease family protein contains Pfam profile:PF00026 eukaryotic aspartyl protease 1 3 21 10 At5g07090 40S ribosomal protein S4 (RPS4B) 1 3 21 11 At5g07240 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 3 21 12 At5g07300 "copine, putative strong similarity to BONZAI1 [Arabidopsis thaliana] GI:15487382; contains Pfam profile PF00168: C2 domain" 1 3 21 13 At5g10390 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 1 3 21 14 At5g10450 14-3-3 protein GF14 lambda (GRF6) (AFT1) identical to 14-3-3 GF14lambda GI:1345595 from [Arabidopsis thaliana] 1 3 21 15 At5g10610 "cytochrome P450 family protein similar to Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana]; similar to cytochrome P450, Helianthus tuberosus, EMBL:HTCYP81L" 1 3 21 16 At5g10670 hypothetical protein 97% similarity to At3g28240 (Arabidopsis thaliana); predicted protein 1 3 21 17 At5g10810 "enhancer of rudimentary protein, putative identical to enhancer of rudimentary homolog SP:Q96319 from [Arabidopsis thaliana]; contains Pfam profile: PF01133 enhancer of rudimentary" 1 3 21 18 At5g10870 "chorismate mutase, cytosolic (CM2) identical to gi:5732016" 1 3 21 19 At5g11030 expressed protein 1 3 21 20 At5g11090 serine-rich protein-related contains some similarity to serine-rich proteins 1 3 21 21 At5g14230 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 1 3 21 22 At5g14280 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 1 3 21 23 At5g14460 pseudouridylate synthase TruB family protein similar to SP|P09171 tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli O157:H7}; contains Pfam profile PF01509: TruB family pseudouridylate synthase (N terminal domain) 1 3 21 24 At5g14520 "pescadillo-related similar to pescadillo [Zebrafish, Danio rerio] SWISS-PROT:P79741" 1 3 21 25 At5g14670 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus carota]." 1 3 22 1 At5g14730 expressed protein 1 3 22 2 At5g14910 heavy-metal-associated domain-containing protein Pfam profile PF00403: Heavy-metal-associated domain 1 3 22 3 At5g14960 "transcription factor, putative / E2F-like repressor E2L1 (E2L1) identical to E2F-like repressor E2L1 GI:20502504 from [Arabidopsis thaliana]" 1 3 22 4 At5g17640 expressed protein 1 3 22 5 At5g17700 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 1 3 22 6 At5g17840 chaperone protein dnaJ-related similar to bundle sheath defective protein 2 (GI:4732091) [Zea mays] 1 3 22 7 At5g17900 expressed protein 1 3 22 8 At5g18080 "auxin-responsive protein, putative similar to GP:3043536 SAUR {Raphanus sativus}" 1 3 22 9 At5g18130 expressed protein similar to unknown protein (gb|AAF00631.1) 1 3 22 10 At5g18270 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 1 3 22 11 At5g18310 "expressed protein predicted proteins, Drosophila melanogaster" 1 3 22 12 At5g20920 "eukaryotic translation initiation factor 2 subunit 2, putative / eIF-2-beta, putative similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5" 1 3 22 13 At5g20960 aldehyde oxidase 1 (AAO1) identical to aldehyde oxidase AAO1 from Arabidopsis thaliana [gi:3172023] isoform contains a GA-donor splice site at intron 10 1 3 22 14 At5g21125 hypothetical protein 1 3 22 15 At5g21222 protein kinase family protein contains Pfam profile: PF00069 protein kinase domain 1 3 22 16 At5g22020 strictosidine synthase family protein similar to SP|P15324 Strictosidine synthase precursor (EC 4.3.3.2) {Rauvolfia mannii}; contains Pfam profile PF03088: Strictosidine synthase 1 3 22 17 At5g22050 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 1 3 22 18 At5g22210 expressed protein 1 3 22 19 At5g22270 expressed protein similar to unknown protein (gb AAF02129.1) 1 3 22 20 At5g24900 "cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; fatty acid omega-hydroxylase cytochrome P450 4A11 - Homo sapiens, PIR:I53015" 1 3 22 21 At5g24960 "cytochrome P450 71A14, putative (CYP71A14) identical to Cytochrome P450 71A14 (SP:P58045) [Arabidopsis thaliana]; cytochrome P450 - Nepeta racemosa, EMBL:Y09423" 1 3 22 22 At5g25140 "cytochrome P450 family protein CYTOCHROME P450 71B1 - Thlaspi arvense, EMBL:L24438" 1 3 22 23 At5g25200 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 1 3 22 24 At5g25360 expressed protein 1 3 22 25 At5g25400 "phosphate translocator-related low siimilarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 1 3 23 1 At5g25520 transcription elongation factor-related contains weak similarity to transcription elongation factors 1 3 23 2 At5g25560 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 23 3 At5g28570 hypothetical protein 1 3 23 4 At5g28623 hypothetical protein 1 3 23 5 At5g28790 hypothetical protein 1 3 23 6 At5g28840 NAD-dependent epimerase/dehydratase family protein similar to sugar epimerase BlmG from Streptomyces verticillus GI:9937230; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 1 3 23 7 At5g29020 hypothetical protein 1 3 23 8 At5g29602 hypothetical protein 1 3 23 9 At5g31838 hypothetical protein 1 3 23 10 At5g32440 expressed protein 1 3 23 11 At5g37580 "tropomyosin-related low similarity to tropomyosin gene 1, isoform 9D, D.melanogaster, EMBL:DMTRO13 (GI:158696)" 1 3 23 12 At5g37640 polyubiquitin (UBQ9) identical to polyubiquitin (ubq9) gene sequence GI:304120 from [Arabidopsis thaliana] 1 3 23 13 At5g37830 "hydantoinase/oxoprolinase family protein contains Pfam profiles: PF02538 hydantoinase B/oxoprolinase, PF01968 hydantoinase/oxoprolinase, PF05378 hydantoinase/oxoprolinase N-terminal region" 1 3 23 14 At5g37890 "seven in absentia (SINA) protein, putative similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family" 1 3 23 15 At5g38060 expressed protein ; expression supported by MPSS 1 3 23 16 At5g38120 "4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to 4CL2, Arabidopsis thaliana [gi:12229665], 4CL1, Nicotiana tabacum [gi:12229631]; contains Pfam AMP-binding enzyme domain PF00501" 1 3 23 17 At5g38290 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 1 3 23 18 At5g38350 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 1 3 23 19 At5g41180 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 1 3 23 20 At5g41250 exostosin family protein contains Pfam profile: PF03016 exostosin family 1 3 23 21 At5g41430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 23 22 At5g41490 F-box family protein contains Pfam profile: PF00646 F-box domain 1 3 23 23 At5g41660 hypothetical protein similar to unknown protein (emb|CAB86921.1) 1 3 23 24 At5g41700 "ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131" 1 3 23 25 At5g41850 expressed protein 1 3 24 1 At5g41910 RNA polymerase II mediator complex protein-related similar to SP|P87310 RNA polymerase II mediator complex protein nut2 {Schizosaccharomyces pombe} 1 3 24 2 At5g44560 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 3 24 3 At5g44600 expressed protein 1 3 24 4 At5g44740 UMUC-like DNA repair family protein low similarity to DNA polymerase eta [Homo sapiens] GI:11463971; contains Pfam profile PF00817: ImpB/MucB/SamB family 1 3 24 5 At5g44780 "expressed protein low similarity to SP|Q38732 DAG protein, chloroplast precursor {Antirrhinum majus}" 1 3 24 6 At5g44940 F-box family protein contains F-box domain Pfam:PF00646 1 3 24 7 At5g45000 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 3 24 8 At5g45140 "DNA-directed RNA polymerase, putative similar to SP|P22276 DNA-directed RNA polymerase III 130 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 2) {Saccharomyces cerevisiae}; contains Pfam profiles PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF04566: RNA polymerase Rpb2 domain 4, PF04567: RNA polymerase Rpb2 domain 5" 1 3 24 9 At5g45200 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 24 10 At5g47740 expressed protein 1 3 24 11 At5g47800 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 3 24 12 At5g47950 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna][GI:6166328][PMID:10588064]" 1 3 24 13 At5g48010 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase [gi:6650207] [PMID: 11247608] Contains Pfam domain PF00432: Prenyltransferase and squalene oxidase repeat" 1 3 24 14 At5g48180 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (5 repeats) ;similar to Tip elongation aberrant protein 1 (Cell polarity protein tea1) (SP:P87061) [Schizosaccharomyces pombe] 1 3 24 15 At5g48230 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 1 3 24 16 At5g48390 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 1 3 24 17 At5g48440 FAD-dependent oxidoreductase family protein low similarity to hydrogen cyanide synthase HcnC from Pseudomonas fluorescens [GI:3220203]; contains Pfam profile PF01266 FAD dependent oxidoreductase 1 3 24 18 At5g51140 pseudouridine synthase family protein low similarity to SP|P23851 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 1 3 24 19 At5g51180 expressed protein 1 3 24 20 At5g51330 meiosis protein-related (DYAD) (SWI1) annotation temporarily based on supporting cDNA gi|18483289|gb|AF466153.1|; supporting cDNA are SWITCH1 splice variant S and SWITCH1 splice variant L (SWI1) GI:16033413 and GI:16033410 1 3 24 21 At5g51390 expressed protein similar to unknown protein (gb|AAB68039.1) 1 3 24 22 At5g51560 "leucine-rich repeat transmembrane protein kinase, putative " 1 3 24 23 At5g51620 expressed protein 1 3 24 24 At5g51760 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phosphatase 2C (GI:10432446) [Nicotiana tabacum]" 1 3 24 25 At5g51810 "gibberellin 20-oxidase, putative similar to gibberellin 20-oxidase GI:1109695, GI:9791186" 1 3 25 1 At5g54570 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 1 3 25 2 At5g54600 "50S ribosomal protein L24, chloroplast (CL24) identical to SP|P92959 50S ribosomal protein L24, chloroplast precursor {Arabidopsis thaliana}" 1 3 25 3 At5g54750 "transport protein particle (TRAPP) component Bet3, putative similar to SP|P36149 Transport protein particle 22 kDa subunit (TRAPP 22 kDa subunit) {Saccharomyces cerevisiae}; contains Pfam profile PF04051: Transport protein particle (TRAPP) component, Bet3" 1 3 25 4 At5g54810 "tryptophan synthase, beta subunit 1 (TSB1) identical to SP|P14671" 1 3 25 5 At5g54940 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 1 3 25 6 At5g55000 "potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein contains Pfam profiles PF02214: K+ channel tetramerisation domain, PF00805: Pentapeptide repeats (8 copies)" 1 3 25 7 At5g55132 expressed protein 1 3 25 8 At5g55180 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 3 25 9 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 1 3 25 10 At5g57900 "SKP1/ASK1 interacting partner 1 (SKIP1) / SCF (Skp1-cullin-F-box) ubiquitin ligase identical to SKP1 interacting partner 1 GI:10716947 from [Arabidopsis thaliana], PMID:11387208" 1 3 25 11 At5g58070 "lipocalin, putative similar to temperature stress-induced lipocalin [Triticum aestivum] GI:18650668" 1 3 25 12 At5g58130 RNA recognition motif (RRM)-containing protein 1 3 25 13 At5g58270 mitochondrial half-ABC transporter (STA1) identical to half-molecule ABC transporter ATM3 GI:9964121 from [Arabidopsis thaliana]; almost identical to mitochondrial half-ABC transporter STA1 GI:9187883 from [Arabidopsis thaliana]; identical to cDNA mitochondrial half-ABC transporter (STA1 gene)GI:9187882 1 3 25 14 At5g58320 kinase interacting protein-related low similarity to kinase interacting protein 1 [Petunia integrifolia] GI:13936326 1 3 25 15 At5g58460 "cation/hydrogen exchanger, putative (CHX25) similar to Na+/H+-exchanging protein slr1595, Synechocystis sp., PIR:S74951; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 3 25 16 At5g58520 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 25 17 At5g61110 hypothetical protein 1 3 25 18 At5g61150 leo1-like family protein weak similarity to SP|P38439 LEO1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04004: Leo1-like protein; supporting cDNA gi|21929714|gb|AF490422.1| 1 3 25 19 At5g61310 "cytochrome c oxidase subunit Vc, putative / COX5C, putative similar to cytochrome c oxidase subunit 5c [Helianthus annuus] GI:18409602; contains Pfam profile PF05799: Cytochrome c oxidase subunit Vc (COX5C)" 1 3 25 20 At5g61370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 25 21 At5g61530 "small G protein family protein / RhoGAP family protein contains Pfam domain, PF00620: RhoGAP domain" 1 3 25 22 At5g61550 "protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain; protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503" 1 3 25 23 At5g61710 hypothetical protein 1 3 25 24 At5g61770 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 1 3 25 25 At5g64460 expressed protein 1 3 26 1 At5g64490 expressed protein 1 3 26 2 At5g64630 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] 1 3 26 3 At5g64680 expressed protein 1 3 26 4 At5g64816 expressed protein 1 3 26 5 At5g64860 "4-alpha-glucanotransferase, putative / disproportionating enzyme, putative similar to 4-alpha-glucanotransferase SP:Q06801 from [Solanum tuberosum]" 1 3 26 6 At5g65010 asparagine synthetase 2 (ASN2) identical to asparagine synthetase (ASN2) [Arabidopsis thaliana] GI:3859536 1 3 26 7 At5g65050 MADS-box protein (MAF2) 1 3 26 8 At5g67590 "NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-21KD) (CI-21KD). (Swiss-Prot:P25711) [Neurospora crassa]; contains Pfam PF04800: ETC complex I subunit conserved region" 1 3 26 9 At1g18010 expressed protein contains 11 transmembrane domains; 1 3 26 10 At5g36820 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 3 26 11 At5g50710 hypothetical protein 1 3 26 12 ath-MIR159b miRNA gene Arabidopsis thaliana miR159b stem-loop 1 3 26 13 ath-MIR165b miRNA gene Arabidopsis thaliana miR165b stem-loop 1 3 26 14 ath-MIR399c miRNA gene Arabidopsis thaliana miR399c stem-loop 1 3 26 15 ath-MIR319c miRNA gene Arabidopsis thaliana miR319c stem-loop 1 3 26 16 At3g43900 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 3 26 17 At3g43960 "cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 1 3 26 18 At3g44130 F-box family protein contains F-box domain Pfam:PF00646 1 3 26 19 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein low similarity to dihydrolipoamide dehydrogenase from Clostridium magnum [GI:472330]; contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 1 3 26 20 At3g44370 expressed protein weak similarity to AtOXA1 [Arabidopsis thaliana] GI:6624207 1 3 26 21 At3g44460 basic leucine zipper transcription factor (BZIP67) identical to basic leucine zipper transcription factor GI:18656053 from [Arabidopsis thaliana]; identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052 1 3 26 22 At3g44620 low molecular weight phosphotyrosine protein phosphatase family protein contains Pfam profile: PF01451 low molecular weight phosphotyrosine protein phosphatase 1 3 26 23 At3g44690 expressed protein 1 3 26 24 Blank Blank 1 3 26 25 Blank Blank 1 4 1 1 atc05 Randomly generated negative control 1 4 1 2 atc11 Randomly generated negative control 1 4 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 1 4 1 4 atc01 Randomly generated negative control 1 4 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 1 4 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 4 1 7 atc09 Randomly generated negative control 1 4 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 1 4 1 9 At1g02840 pre-mRNA splicing factor SF2 (SF2) / SR1 protein identical to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana} 1 4 1 10 At1g02860 "SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related weak similarity to tripartite motif protein TRIM13 [Mus musculus] GI:12407427, gpStaf50 [Homo sapiens] GI:899300; contains Pfam profiles PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 1 11 At1g02970 "protein kinase, putative similar to Wee1-like protein GI:5821717 from [Zea mays]" 1 4 1 12 At1g03010 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 4 1 13 At1g03140 splicing factor Prp18 family protein contains Pfam profile: PF02840 Prp18 domain 1 4 1 14 At1g03200 expressed protein 1 4 1 15 At1g03380 expressed protein 1 4 1 16 At1g03440 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 1 4 1 17 At1g06100 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 1 4 1 18 At1g06135 expressed protein 1 4 1 19 At1g06280 LOB domain family protein / lateral organ boundaries domain family protein (LBD2) nearly identical to SP|Q9LNB9 Putative LOB domain protein 2 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 1 4 1 20 At1g06350 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 1 4 1 21 At1g06520 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase 1 4 1 22 At1g06580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 1 23 At1g06760 "histone H1, putative similar to histone H1-1 GB:CAA44312 GI:16314 from [Arabidopsis thaliana]; identical to cDNA H1-1C mRNA for histone H1-1 (partial) GI:732560" 1 4 1 24 At1g06790 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 1 4 1 25 At1g09290 expressed protein This gene is continued on the 5' end of BAC T12M14 1 4 2 1 At1g09350 "galactinol synthase, putative contains Pfam profile: PF01501 glycosyl transferase family 8" 1 4 2 2 At1g09500 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 1 4 2 3 At1g09550 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 1 4 2 4 At1g09690 "60S ribosomal protein L21 (RPL21C) Similar to ribosomal protein L21 (gb|L38826). ESTs gb|AA395597,gb|ATTS5197 come from this gene" 1 4 2 5 At1g09750 "chloroplast nucleoid DNA-binding protein-related contains Pfam profile PF00026: Eukaryotic aspartyl protease;b similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 1 4 2 6 At1g09890 expressed protein ; expression supported by MPSS 1 4 2 7 At1g09935 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 1 4 2 8 At1g12530 hypothetical protein ; expression supported by MPSS 1 4 2 9 At1g12600 hypothetical protein 1 4 2 10 At1g12780 "UDP-glucose 4-epimerase / UDP-galactose 4-epimerase / Galactowaldenase identical to SP|Q42605 [GB:CAA90941] from [Arabidopsis thaliana] (Arch. Biochem. Biophys. 327 (1), 27-34 (1996))" 1 4 2 11 At1g12830 expressed protein 1 4 2 12 At1g13000 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 1 4 2 13 At1g13080 "cytochrome P450 family protein identical to gb|D78605 cytochrome P450 monooxygenase from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and gb|T43466 come from this gene" 1 4 2 14 At1g13220 nuclear matrix constituent protein-related similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 1 4 2 15 At1g13270 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 1 4 2 16 At1g15920 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 1 4 2 17 At1g15970 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 1 4 2 18 At1g16140 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 1 4 2 19 At1g16210 expressed protein ESTs gb|T04357 and gb|AA595092 come from this gene 1 4 2 20 At1g16380 "cation/proton exchanger, putative (CHX1) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 4 2 21 At1g16420 "latex-abundant protein, putative (AMC8) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain" 1 4 2 22 At1g16590 "mitotic spindle checkpoint protein, putative similar to Mad2B protein [Homo sapiens] gi|4835900|gb|AAD30290" 1 4 2 23 At1g16650 expressed protein 1 4 2 24 At1g19440 "very-long-chain fatty acid condensing enzyme, putative similar to GB:AAD37122 from [Arabidopsis thaliana]" 1 4 2 25 At1g19490 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 1 4 3 1 At1g19680 expressed protein 1 4 3 2 At1g19730 thioredoxin H-type 4 (TRX-H-4) (GREN) identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4) {Arabidopsis thaliana} 1 4 3 3 At1g19930 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 4 3 4 At1g19990 expressed protein ; expression supported by MPSS 1 4 3 5 At1g20190 "expansin, putative (EXP11) similar to GB:U30460 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 1 4 3 6 At1g20260 "vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative strong similarity to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF02874: ATP synthase alpha/beta family beta-barrel domain" 1 4 3 7 At1g22970 expressed protein 1 4 3 8 At1g23020 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane component" 1 4 3 9 At1g23160 "auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591, auxin-responsive GH3 homologue [Arabidopsis thaliana] GI:11041726; contains Pfam profile PF03321: GH3 auxin-responsive promoter" 1 4 3 10 At1g23210 "glycosyl hydrolase family 9 protein similar to endo-1,4-beta-glucanase GB:CAA67157 GI:2440035 from (Arabidopsis thaliana)" 1 4 3 11 At1g23360 "UbiE/COQ5 methyltransferase family protein similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase GB:BAA25267 GI:2982680 from [Micrococcus luteus]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 1 4 3 12 At1g23400 expressed protein 1 4 3 13 At1g23540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 4 3 14 At1g23600 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 1 4 3 15 At1g27320 histidine kinase (AHK3) identical to histidine kinase AHK3 [Arabidopsis thaliana] gi|13537198|dbj|BAB40775 1 4 3 16 At1g27370 squamosa promoter-binding protein-like 10 (SPL10) identical to squamosa promoter binding protein-like 10 [Arabidopsis thaliana] GI:5931669; contains Pfam profile PF03110: SBP domain 1 4 3 17 At1g27480 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to LCAT-like lysophospholipase (LLPL) [Homo sapiens] GI:4589720; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 1 4 3 18 At1g27540 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; confirmed by FLcDNA GI:16604421; contains uncharacterized Arabidoppsis domain shared by 33 Arabidopsis proteins" 1 4 3 19 At1g27695 glycine-rich protein 1 4 3 20 At1g27750 ubiquitin system component Cue domain-containing protein very low similarity to ASC-1 complex subunit P100 [Homo sapiens] GI:12061187; contains Pfam profile PF02845: CUE domain 1 4 3 21 At1g27920 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 4 3 22 At1g27980 pyridoxal-dependent decarboxylase family protein similar to sphingosine-1-phosphate lyase [Homo sapiens] GI:10129683; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain 1 4 3 23 At1g30880 expressed protein similar to ESTs gb|R30049 and gb|T46176 1 4 3 24 At1g30950 unusual floral organ (UFO) / F-box family protein (FBX1) E3 ubiquitin ligase SCF complex F-box subunit; almost identical to unusual floral organs (UFO)GI:4376159 from [Arabidopsis thaliana] Landsberg-erecta; one amino acid difference 1 4 3 25 At1g31160 "zinc-binding protein, putative / protein kinase C inhibitor, putative similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor, PKCI) [Zea mays] Swiss-Prot:P42856" 1 4 4 1 At1g31200 expressed protein 1 4 4 2 At1g31380 hypothetical protein 1 4 4 3 At1g31440 SH3 domain-containing protein 1 (SH3P1) nearly identical to SH3 domain-containing protein 1 [Arabidopsis thaliana] GI:16974676; contains Pfam profile PF00018: SH3 domain 1 4 4 4 At1g31650 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 1 4 4 5 At1g31720 expressed protein 1 4 4 6 At1g34770 MAGE-8 antigen-related contains weak similarity to Swiss-Prot:P43361 melanoma-associated antigen 8 (MAGE-8 antigen) [Homo sapiens] 1 4 4 7 At1g35030 hypothetical protein 1 4 4 8 At1g35260 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 1 4 4 9 At1g35340 ATP-dependent protease La (LON) domain-containing protein contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 1 4 4 10 At1g35540 "transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02362 B3 DNA binding domain, PF02309: AUX/IAA family" 1 4 4 11 At1g35614 hypothetical protein 1 4 4 12 At1g35830 VQ motif-containing protein contains PF05678: VQ motif 1 4 4 13 At1g35910 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 1 4 4 14 At1g47485 expressed protein 1 4 4 15 At1g47530 "ripening-responsive protein, putative similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family" 1 4 4 16 At1g47710 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 1 4 4 17 At1g47765 F-box family protein contains F-box domain Pfam:PF00646 1 4 4 18 At1g47915 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 4 4 19 At1g47990 "gibberellin 2-oxidase, putative / GA2-oxidase, putative similar to GA2ox1 [GI:4678366]; similar to dioxygenase GB:CAA70330 GI:1666096 from [Marah macrocarpus]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 4 4 20 At1g48145 hypothetical protein 1 4 4 21 At1g48190 hypothetical protein 1 4 4 22 At1g51260 "acyl-CoA:1-acylglycerol-3-phosphate acyltransferase, putative similar to acyl-CoA:1-acylglycerol-3-phosphate acyltransferase GI:4583544 from [Brassica napus]" 1 4 4 23 At1g51320 F-box family protein (FBX11) contains F-box domain PF:00646 1 4 4 24 At1g51460 "ABC transporter family protein similar to SP|Q9UNQ0 ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) {Homo sapiens}; contains Pfam profile PF00005: ABC transporter" 1 4 4 25 At1g51520 "expressed protein contains a weak hit to PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 1 4 5 1 At1g51660 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK4) identical to MAP kinase kinase 4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830 gi_13265419" 1 4 5 2 At1g51690 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to 55 kDa B regulatory subunit of phosphatase 2A (GI:710330) [Arabidopsis thaliana]; similar to type 2A protein serine/threonine phosphatase 55 kDa B regulatory GI:1408460 [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 1 4 5 3 At1g51850 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376" 1 4 5 4 At1g51910 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 4 5 5 At1g54530 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 4 5 6 At1g54580 "acyl carrier protein, chloroplast, putative / ACP, putative strong similarity to SP|P25701 Acyl carrier protein 2, chloroplast precursor (ACP) {Arabidopsis thaliana}; contains InterPro accession IPR003881: Isochorismatase" 1 4 5 7 At1g54770 expressed protein 1 4 5 8 At1g54830 "CCAAT-box binding transcription factor Hap5a, putative similar to heme activated protein GI:6289057 from (Arabidopsis thaliana) GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina} similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 1 4 5 9 At1g54970 proline-rich family protein similar to proline-rich protein GI:170048 from [Glycine max] 1 4 5 10 At1g55030 F-box family protein contains F-box domain Pfam:PF00646 1 4 5 11 At1g55220 hypothetical protein 1 4 5 12 At1g55265 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 1 4 5 13 At1g59730 "thioredoxin, putative similar to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana}; contains Pfam profile: PF00085 Thioredoxin" 1 4 5 14 At1g59790 cullin-related low similarity to Hs-CUL-1 [Homo sapiens] GI:1381142 1 4 5 15 At1g59910 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128" 1 4 5 16 At1g59970 matrixin family protein similar to SP|P29136 Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) {Glycine max}; contains InterPro accession IPR001818: Matrixin 1 4 5 17 At1g60160 "potassium transporter family protein similar to potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 1 4 5 18 At1g60230 radical SAM domain-containing protein contains Pfam profile PF04055: radical SAM domain protein 1 4 5 19 At1g60460 hypothetical protein 1 4 5 20 At1g60550 "naphthoate synthase, putative / dihydroxynaphthoic acid synthetase, putative / DHNA synthetase, putative contains similarity to MENB from Escherichia coli [SP|P27290], Bacillus subtilis [SP|P23966]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 1 4 5 21 At1g63350 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 4 5 22 At1g63410 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567); expression supported by MPSS 1 4 5 23 At1g63600 protein kinase-related low similarity to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam profile: PF01657 Domain of unknown function DUF26 1 4 5 24 At1g63640 kinesin motor protein-related C-terminal region is similar to C-term region of kinesin motor protein GB:AAB51397 (Mus musculus); contains Pfam profile: PF00225 Kinesin motor domain 1 4 5 25 At1g63770 peptidase M1 family protein similar to SP|P04825 Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) {Escherichia coli}; contains Pfam profile PF01433: Peptidase family M1 1 4 6 1 At1g63830 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains 1 predicted transmembrane domain" 1 4 6 2 At1g63970 "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GI:7621712 from [Catharanthus roseus]" 1 4 6 3 At1g64020 serpin-related / serine protease inhibitor-related similar to phloem serpin-1 [Cucurbita maxima] GI:9937311 1 4 6 4 At1g66820 glycine-rich protein 1 4 6 5 At1g66880 "serine/threonine protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 1 4 6 6 At1g67040 expressed protein ; expression supported by MPSS 1 4 6 7 At1g67090 "ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) identical to SP|P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) {Arabidopsis thaliana}" 1 4 6 8 At1g67280 "lactoylglutathione lyase, putative / glyoxalase I, putative similar to putative lactoylglutathione lyase SP:Q39366, GI:2494843 from [Brassica oleracea]" 1 4 6 9 At1g67320 "DNA primase, large subunit family contains Pfam profile PF04104: Eukaryotic-type DNA primase, large subunit; similar to DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58) (Swiss-Prot:P49643) [Homo sapiens]" 1 4 6 10 At1g67490 "alpha-glucosidase I (GCS1) / KNOPF (KNF) identical to alpha-glucosidase I (GI:16506680, GI:13398928) [Arabidopsis thaliana]" 1 4 6 11 At1g67550 "urease, putative / urea amidohydrolase, putative similar to SP|P07374 Urease (EC 3.5.1.5) (Urea amidohydrolase) {Canavalia ensiformis}; contains Pfam profile PF01979: Amidohydrolase family" 1 4 6 12 At1g70180 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 1 4 6 13 At1g70230 expressed protein 1 4 6 14 At1g70410 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 1 4 6 15 At1g70460 "protein kinase, putative contains Pfam PF00069: Protein kinase domain" 1 4 6 16 At1g70580 "glutamate:glyoxylate aminotransferase 2 (GGT2) identical to glutamate:glyoxylate aminotransferase 2 [Arabidopsis thaliana] GI:24461829; similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GI:4730884 from Oryza sativa; contains Pfam profile PF00155: aminotransferase, classes I and II" 1 4 6 17 At1g70630 expressed protein 1 4 6 18 At1g70790 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 1 4 6 19 At1g70830 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 1 4 6 20 At1g73660 protein kinase family protein contains Pfam profile: PF00069 eukaryotic protein kinase domain 1 4 6 21 At1g73720 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to Will die slowly protein (SP:Q9V3J8)[Drosophila melanogaster] 1 4 6 22 At1g73880 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 4 6 23 At1g73940 expressed protein 1 4 6 24 At1g74090 sulfotransferase family protein similar to SP|P52837 Flavonol 4'-sulfotransferase (EC 2.8.2.-) (F4-ST) {Flaveria chloraefolia}; contains Pfam profile PF00685: Sulfotransferase domain 1 4 6 25 At1g74150 "kelch repeat-containing protein low similarity to rngB protein, Dictyostelium discoideum, PIR:S68824; contains Pfam profile PF01344: Kelch motif" 1 4 7 1 At1g74325 expressed protein ; expression supported by MPSS 1 4 7 2 At1g74380 "galactosyl transferase GMA12/MNN10 family protein very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 1 4 7 3 AT5G57480 PC-1 D12 1 4 7 4 3XSSC PC-1 D24 1 4 7 5 AT1G29930 PC-1 H12 1 4 7 6 3XSSC PC-1 H24 1 4 7 7 AT3G44150 PC-1 L12 1 4 7 8 3XSSC PC-1 L24 1 4 7 9 AT4G00810 PC-1 P12 1 4 7 10 3XSSC PC-1 P24 1 4 7 11 At1g77140 "vacuolar protein sorting protein 45, putative / VPS45p, putative identical to vacuolar protein sorting homolog VPS45p [Arabidopsis thaliana] gi|2921406|gb|AAC39472" 1 4 7 12 At1g77200 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana] similar to TINY (GP:1246403) [Arabidopsis thaliana] similar to TINY (GP:1246403) [Arabidopsis thaliana]" 1 4 7 13 At1g77380 "amino acid carrier, putative / amino acid permease, putative strong similarity to amino acid carrier GI:3293031 from [Ricinus communis]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein; identical to cDNA AAP3 (Amino Acid Permease) GI:3970651" 1 4 7 14 At1g77440 20S proteasome beta subunit C (PBC2) identical to residues 14-204 of 20S proteasome beta subunit PBC2 GB:AAC32069 [Arabidopsis thaliana] 1 4 7 15 At1g77610 "glucose-6-phosphate/phosphate translocator-related similar to glucose-6-phosphate/phosphate-translocators from [Mesembryanthemum crystallinum] GI:9295277, [Solanum tuberosum] GI:2997593, [Pisum sativum] GI:2997591; contains Pfam profile PF00892: Integral membrane protein" 1 4 7 16 At1g77660 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related low similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 1 4 7 17 At1g77810 galactosyltransferase family protein contains Pfam profile PF01762: Galactosyltransferase 1 4 7 18 At1g77850 transcriptional factor B3 family protein similar to auxin response factor 10 GI:6165644 from [Arabidopsis thaliana]; contains Pfam profile PF02362: B3 DNA binding domain 1 4 7 19 At1g80420 "DNA repair protein, putative (XRCC1) identical to putative DNA repair protein XRCC1 [Arabidopsis thaliana] GI:11181954; contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 1 4 7 20 At1g80470 F-box family protein contains F-box domain Pfam:PF00646 1 4 7 21 At1g80650 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 1 4 7 22 At1g80710 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to damage-specific DNA-binding protein 2 (DDB2) [Mus musculus] 1 4 7 23 At1g80865 expressed protein 1 4 7 24 At1g80920 "DNAJ heat shock N-terminal domain-containing protein similar to SP|Q05646 Chaperone protein dnaJ Erysipelothrix rhusiopathiae, SP|P45555 Chaperone protein dnaJ (HSP40) Staphylococcus aureus; contains Pfam profile PF00226 DnaJ domain" 1 4 7 25 At2g01100 expressed protein 1 4 8 1 At2g01150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 8 2 At2g04063 glycine-rich protein 1 4 8 3 At2g04135 hypothetical protein 1 4 8 4 At2g04370 hypothetical protein 1 4 8 5 At2g04420 expressed protein 1 4 8 6 At2g04580 hypothetical protein 1 4 8 7 At2g04675 expressed protein 1 4 8 8 At2g04865 expressed protein ; expression supported by MPSS 1 4 8 9 At2g04920 "F-box family protein (FBX9) identical to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains F-box domain PF:00646; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 1 4 8 10 At2g12170 expressed protein 1 4 8 11 At2g12345 hypothetical protein 1 4 8 12 At2g13070 hypothetical protein 1 4 8 13 At2g13290 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 1 4 8 14 At2g13620 "cation/hydrogen exchanger, putative (CHX15) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 4 8 15 At2g13660 expressed protein 1 4 8 16 At2g13975 Expressed protein 1 4 8 17 At2g14045 expressed protein 1 4 8 18 At2g17260 "glutamate receptor family protein (GLR3.1) (GLR2) identical to putative glutamate receptor GLR2 [Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant glutamate receptor family, PMID:11379626" 1 4 8 19 At2g17305 hypothetical protein 1 4 8 20 At2g17520 "protein kinase family protein / Ire1 homolog-2 (IRE1-2) contains protein kinase domain, Pfam:PF00069; identical to Ire1 homolog-2 [Arabidopsis thaliana] GI:15277139, cDNA Ire1 homolog-2 GI:15277138" 1 4 8 21 At2g17570 undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein contains putative undecaprenyl diphosphate synthase domain [PF01255]; similar to dehydrodolichyl diphosphate synthetase (DEDOL-PP synthase) [GI:796076] and S. cerevisiae Rer2 [SP|P35196] 1 4 8 22 At2g17730 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger) domain; similar to RING-H2 finger protein RHA3a (GI:3790573) [Arabidopsis thaliana]; similar to ReMembR-H2 protein JR700 (GI:6942147) [Arabidopsis thaliana]" 1 4 8 23 At2g17785 zinc-binding protein-related similar to zinc-binding protein [Pisum sativum] GI:16117799 1 4 8 24 At2g17960 hypothetical protein 1 4 8 25 At2g18000 YEATS family protein contains Pfam domain PF03366: YEATS family 1 4 9 1 At2g20725 CAAX amino terminal protease family protein contains Pfam profile PF02517 CAAX amino terminal protease family protein 1 4 9 2 At2g20770 "lanthionine synthetase C-like family protein contains Pfam domain, PF05147: Lanthionine synthetase C-like protein" 1 4 9 3 At2g20870 "cell wall protein precursor, putative identical to Putative cell wall protein precursor (Swiss-Prot:P47925) [Arabidopsis thaliana]; weak similarity to mu-protocadherin (GI:7861967) [Rattus norvegicus]" 1 4 9 4 At2g20920 expressed protein 1 4 9 5 At2g21080 expressed protein 1 4 9 6 At2g21140 hydroxyproline-rich glycoprotein family protein identical to proline-rich protein 2 [Arabidopsis thaliana] gi|7620011|gb|AAF64549 1 4 9 7 At2g21250 "mannose 6-phosphate reductase (NADPH-dependent), putative 6-phosphate reductase [Apium graveolens][GI:1835701], NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Malus domestica][SP|P28475]" 1 4 9 8 At2g21320 zinc finger (B-box type) family protein 1 4 9 9 At2g24200 "cytosol aminopeptidase identical to cytosol aminopeptidase SP:P30184 from [Arabidopsis thaliana]; contains Pfam profiles: PF00883 cytosol aminopeptidase family catalytic domain, PF02789: cytosol aminopeptidase family N-terminal domain" 1 4 9 10 At2g24255 hypothetical protein 1 4 9 11 At2g24420 DNA repair ATPase-related contains 2 transmembrane domains; similar to DNA double-strand break repair rad50 ATPase. (Swiss-Prot:O33600) [Sulfolobus acidocaldarius] 1 4 9 12 At2g24480 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 9 13 At2g24640 "ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to ubiquitin-specific protease 15 (UBP15) [Arabidopsis thaliana] GI:11993475; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF01753: MYND finger" 1 4 9 14 At2g24700 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 1 4 9 15 At2g24900 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 1 4 9 16 At2g24950 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 1 4 9 17 At2g27660 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 9 18 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 1 4 9 19 At2g27830 expressed protein 1 4 9 20 At2g27900 expressed protein 1 4 9 21 At2g28070 ABC transporter family protein 1 4 9 22 At2g28110 exostosin family protein contains 1 transmembrane domain; similar to pectin-glucuronyltransferase (GI:23821292) [Nicotiana plumbaginifolia]; similar to NpGUT1 homolog (GI:23821294) [Arabidopsis thaliana]; contains Pfam profile PF03016: Exostosin family 1 4 9 23 At2g28290 "chromatin remodeling protein, putative (SYD) similar to transcriptional activator HBRM [Homo sapiens] GI:414117; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; identical to cDNA putative chromatin remodeling protein SYD (SPLAYED) GI:13603720" 1 4 9 24 At2g28320 "pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein contains Pfam profiles PF01852: START domain, PF00169: PH domain" 1 4 9 25 At2g31060 "elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain, PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2" 1 4 10 1 At2g31090 expressed protein 1 4 10 2 At2g31260 autophagy 9 (APG9) identical to autophagy 9 protein GI:19912149 from [Arabidopsis thaliana] 1 4 10 3 At2g31310 LOB domain protein 14 / lateral organ boundaries domain protein 14 (LBD14) identical to SP|Q9SJW5| LOB domain protein 14 {Arabidopsis thaliana} 1 4 10 4 At2g31460 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 1 4 10 5 At2g31530 secY family protein low similarity to SP|P31159 Preprotein translocase secY subunit {Synechococcus sp}; contains Pfam profile PF00344: eubacterial secY protein 1 4 10 6 At2g31690 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 1 4 10 7 At2g31740 expressed protein 1 4 10 8 At2g34310 expressed protein 1 4 10 9 At2g34355 nodulin-related contains 14 transmembrane domains; supported by tandem duplication of nodulin -related protein (TIGR_Ath1:At2g34350) [Arabidopsis thaliana] 1 4 10 10 At2g34480 60S ribosomal protein L18A (RPL18aB) 1 4 10 11 At2g34530 expressed protein 1 4 10 12 At2g34680 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560; identical to cDNA hypothetical protein (AIR9) mRNA, partial cds GI:3695020" 1 4 10 13 At2g34740 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phosphatase type 2C (GI:4336436) [Lotus japonicus]" 1 4 10 14 At2g34920 ubiquitin-protein ligase-related contains weak similarity to Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Swiss-Prot:P23804) [Mus musculus] 1 4 10 15 At2g34990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 10 16 At2g37560 origin recognition complex subunit 2 (ORC2) identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from [Arabidopsis thaliana] 1 4 10 17 At2g37600 60S ribosomal protein L36 (RPL36A) 1 4 10 18 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 1 4 10 19 At2g37810 "CHP-rich zinc finger protein, putative " 1 4 10 20 At2g37975 expressed protein 1 4 10 21 At2g38025 expressed protein 1 4 10 22 At2g38185 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 10 23 At2g38230 "stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963; contains Pfam domain, PF01680: SOR/SNZ family" 1 4 10 24 At2g40780 hypothetical protein 1 4 10 25 At2g40830 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 11 1 At2g40950 bZIP transcription factor family protein similar to AtbZIP transcription factor GI:17065880 from [Arabidopsis thaliana]; contains Pfam profile: bZIP transcription factor PF00170 1 4 11 2 At2g41000 DNAJ heat shock N-terminal domain-containing protein similar to SP|O75190 DnaJ homolog subfamily B member 6 (Heat shock protein J2) Homo sapiens; contains Pfam profile PF00226 DnaJ domain 1 4 11 3 At2g41160 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 1 4 11 4 At2g41220 "glutamate synthase, chloroplast (GLU2) / ferredoxin-dependent glutamate synthase (Fd-GOGAT 2) identical to SP|Q9T0P4 Ferredoxin-dependent glutamate synthase 2, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT 2) {Arabidopsis thaliana}" 1 4 11 5 At2g41400 expressed protein 1 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 1 4 11 7 At2g44000 expressed protein 1 4 11 8 At2g44060 late embryogenesis abundant family protein / LEA family protein similar to ethylene-responsive late embryogenesis-like protein [Lycopersicon esculentum] GI:1684830; contains Pfam profile PF03168: Late embryogenesis abundant protein 1 4 11 9 At2g44190 expressed protein contains Pfam profile: PF04484 family of unknown function (DUF566) 1 4 11 10 At2g44240 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 1 4 11 11 At2g44420 protein N-terminal asparagine amidohydrolase family protein similar to Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-) (Protein NH2-terminal asparagine deamidase) (NTN-amidase) (PNAD) (Protein NH2- terminal asparagine amidohydrolase) (PNAA) (Swiss-Prot:Q64311) [Mus musculus] 1 4 11 12 At2g44480 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 1 4 11 13 At2g44620 "acyl carrier protein, mitochondrial / ACP / NADH-ubiquinone oxidoreductase 9.6 kDa subunit identical to SP|P53665 Acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (MtACP-1) {Arabidopsis thaliana}; identical to cDNA acyl carrier protein precursor GI:468265" 1 4 11 14 At2g44680 "casein kinase II beta chain, putative similar to casein kinase II beta-3 chain (CK II) [Arabidopsis thaliana] SWISS-PROT:O81275" 1 4 11 15 At2g47350 "PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam domains, PF04795: PAPA-1-like conserved region and PF04438: HIT zinc finger" 1 4 11 16 At2g47410 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to WDR protein, form B (GI:14970593) [Mus musculus]" 1 4 11 17 At2g47560 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 11 18 At2g47620 "SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain" 1 4 11 19 At2g47790 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens]; The first 3 exons are identical to that of GB:AJ224957. This gene appears to be a truncated version of that in GB:AJ224957; contains 4 WD-40 repeats (PF00400) 1 4 11 20 At2g47830 "cation efflux family protein / metal tolerance protein, putative (MTPc1) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 1 4 11 21 At2g47970 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 1 4 11 22 At2g48010 serine/threonine protein kinase (RFK3) identical to receptor-like serine/threonine kinase [Arabidopsis thaliana] gi|2465927|gb|AAC50045 1 4 11 23 At3g03340 LUC7 N_terminus domain-containing protein contains Pfam domain PF03194: LUC7 N_terminus 1 4 11 24 At3g03405 hypothetical protein temporary automated functional assignment 1 4 11 25 At3g03580 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 4 12 1 At3g03640 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to beta-glucosidase GB:AAC31962 [Arabidopsis thaliana]; similar to thioglucoside glucohydrolase (GI:984052) [Arabidopsis thaliana] 1 4 12 2 At3g03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein similar to hect domain and RLD 2 GB:NP_004658 [Homo sapiens]; contains Pfam PF00415: Regulator of chromosome condensation (RCC1); contains Pfam PF00023: Ankyrin repeat; similar to rjs (GI:3414809) [Mus musculus]; similar to HERC2 (GI:4079809) [Homo sapiens] 1 4 12 3 At3g03847 auxin-responsive family protein similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus] 1 4 12 4 At3g03970 expressed protein 1 4 12 5 At3g04020 expressed protein 1 4 12 6 At3g06547 expressed protein 1 4 12 7 At3g06590 expressed protein 1 4 12 8 At3g06680 60S ribosomal protein L29 (RPL29B) similar to 60S ribosomal protein L29 GB:P25886 from (Rattus norvegicus) 1 4 12 9 At3g06730 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin 1 4 12 10 At3g06920 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 1 4 12 11 At3g06960 expressed protein 1 4 12 12 At3g07130 serine/threonine protein phosphatase family protein contains similarity to purple acid phosphatase [Arabidopsis thaliana] gi|20257489|gb|AAM15914 1 4 12 13 At3g07180 "GPI transamidase component PIG-S-related similar to GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis, class S protein) (Swiss-Prot:Q96S52) [Homo sapiens]" 1 4 12 14 At3g10220 tubulin folding cofactor B identical to tubulin folding cofactor B GI:20514259 from [Arabidopsis thaliana]; identical to cDNA tubulin folding cofactor B GI:20514258 1 4 12 15 At3g10260 reticulon family protein weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon; identical to cDNA GI:32331854 1 4 12 16 At3g10405 expressed protein 1 4 12 17 At3g10450 serine carboxypeptidase S10 family protein similar to glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; also similar to serine carboxypeptidase I GB:P37890 [Oryza sativa] 1 4 12 18 At3g10580 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain; similar to transcription factor MYBS1 (GI:24850303) [Oryza sativa (japonica cultivar-group)]; similar to I-box binding factor (GI:6688529) [Lycopersicon esculentum] 1 4 12 19 At3g10620 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus angustifolius] GI:1888557, [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 1 4 12 20 At3g10760 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 4 12 21 At3g10800 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor; contains similarity to TGACG-sequence specific DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana tabacum] 1 4 12 22 At3g13227 serine-rich protein-related contains some similarity to serine-rich proteins 1 4 12 23 At3g13235 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 4 12 24 At3g13400 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 1 4 12 25 At3g13445 transcription initiation factor IID-1 (TFIID-1) / TATA-box factor 1 / TATA sequence-binding protein 1 (TBP1) identical to Swiss-Prot:P28147 transcription initiation factor TFIID-1 (TATA-box factor 1)(TATA sequence-binding protein 1) (TBP-1) [Arabidopsis thaliana] 1 4 13 1 At3g13600 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 4 13 2 At3g13660 disease resistance response protein-related/ dirigent protein-related similar to dirigent protein [Forsythia x intermedia] gi|6694695|gb|AAF25358; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 4 13 3 At3g13770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 13 4 At3g13800 metallo-beta-lactamase family protein similar to Metal Dependent Hydrolase GB:AAD18619 from [Chlamydophila pneumoniae] 1 4 13 5 At3g16300 "integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588); At2g38480, At1g45222 and others share this domain structure; distantly related to GP|14030504 salicylic acid-induced fragment 1 protein {Gossypium hirsutum}" 1 4 13 6 At3g16360 "phosphotransfer family protein similar to two-component phosphorelay mediators ATHP1 (GI:4156241), ATHP3 (GI:4156245) [Arabidopsis thaliana], histidine-containing phosphotransfer protein [Catharanthus roseus] GI:13774348" 1 4 13 7 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 4 13 8 At3g16560 protein phosphatase 2C-related / PP2C-related contains protein phosphatase 2C domain 1 4 13 9 At3g16730 expressed protein ; expression supported by MPSS 1 4 13 10 At3g16770 AP2 domain-containing protein RAP2.3 (RAP2.3) identical to GI:2281631 [Arabidopsis thaliana]; identical to cDNA EBP GI:2190330 1 4 13 11 At3g16920 glycoside hydrolase family 19 protein similar to class I chitinase GI:7798670 from [Arabis microphylla] 1 4 13 12 At3g16980 "DNA-directed RNA polymerase II, putative similar to SP|P36958 DNA-directed RNA polymerase II 15.1 kDa polypeptide (EC 2.7.7.6) {Drosophila melanogaster}; contains Pfam profile PF02150: RNA polymerases M/15 Kd subunit" 1 4 13 13 At3g19590 "WD-40 repeat family protein / mitotic checkpoint protein, putative contains 5 WD-40 repeats (PF00400) (1 weak); similar to testis mitotic checkpoint protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]" 1 4 13 14 At3g19650 cyclin-related contains weak similarity to Cylicin I (Multiple-band polypeptide I) (Swiss-Prot:P35662) [Bos taurus] 1 4 13 15 At3g19830 C2 domain-containing protein low similarity to GLUT4 vesicle protein [Rattus norvegicus] GI:4193489; contains Pfam profile PF00168: C2 domain 1 4 13 16 At3g19890 F-box family protein contains F-box domain Pfam:PF00646 1 4 13 17 At3g20050 "T-complex protein 1 alpha subunit / TCP-1-alpha / chaperonin (CCT1) identical to SWISS-PROT:P28769- T-complex protein 1, alpha subunit (TCP-1-alpha) [Arabidopsis thaliana]" 1 4 13 18 At3g20080 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 1 4 13 19 At3g20250 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806 Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (8 copies at C-terminus)" 1 4 13 20 At3g20280 PHD finger family protein contains Pfam profile: PF00628 PHD-finger 1 4 13 21 At3g23020 pentatricopeptide (PPR) repeat-containing protein low similarity to leaf protein [Ipomoea nil] GI:3107905; contains Pfam profile PF01535: PPR repeat 1 4 13 22 At3g23060 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 13 23 At3g23220 "ethylene-responsive element-binding protein, putative similar to SP:O80337,ERFI_ARATH Ethylene responsive element binding factor 1 (AtERF1). {Arabidopsis thaliana}; similar to SP:O04681, PTI5_LYCES Pathogenesis-related genes transcriptional activator PTI5. [Tomato] {Lycopersicon esculentum} >GP|2213783|U89256; similar to EREBP-2 GB:BAA07324 from [Nicotiana tabacum]" 1 4 13 24 At3g23270 regulator of chromosome condensation (RCC1) family protein contains Pfam domain PF00415: Regulator of chromosome condensation (RCC1); similar to zinc finger protein (GI:15811367) [Arabidopsis thaliana]; similar to chromosome condensation regulator protein (GI:22770461) [Cicer arietinum] 1 4 13 25 At3g23420 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 14 1 At3g23490 cyanate lyase family contains Pfam profile: PF02560 cyanate lyase C-terminal domain 1 4 14 2 At3g23680 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 14 3 At3g23730 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase-related protein GI:1244760 from [Arabidopsis thaliana]" 1 4 14 4 At3g26550 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 14 5 At3g26610 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase (PG1) GI:5669846, (PG2) GI:5669848 [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 4 14 6 At3g26710 expressed protein 1 4 14 7 At3g26760 short-chain dehydrogenase/reductase (SDR) family protein similar to sex determination protein tasselseed 2 SP:P50160 from [Zea mays] 1 4 14 8 At3g26900 shikimate kinase family protein similar to shikimate kinase precursor GB:CAA45121 [Lycopersicon esculentum]; contains Pfam shikimate kinase domain PF01202 1 4 14 9 At3g26940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 14 10 At3g27120 "spastin ATPase, putative similar to SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus]; contains Pfam domain, PF00004: ATPase, AAA family" 1 4 14 11 At3g27180 expressed protein 1 4 14 12 At3g30290 "cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; similar to GB:C71417 from [Arabidopsis thaliana] (Nature 391 (6666), 485-488 (1998))" 1 4 14 13 At3g30360 hypothetical protein 1 4 14 14 At3g30560 hypothetical protein 1 4 14 15 At3g30645 hypothetical protein 1 4 14 16 At3g30820 hypothetical protein 1 4 14 17 At3g30848 hypothetical protein contains similarity to hypothetical proteins 1 4 14 18 At3g31950 hypothetical protein 1 4 14 19 At3g32040 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative identical to gi:413730; similar to GB:P34802 from [Arabidopsis thaliana] (Plant Physiol. 104 (4), 1469-1470 (1994))" 1 4 14 20 At3g44805 hypothetical protein 1 4 14 21 At3g44860 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 1 4 14 22 At3g45030 "40S ribosomal protein S20 (RPS20A) 40S ribsomomal proteinS20, Arabidopsis thaliana, pir:T12992" 1 4 14 23 At3g45080 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 1 4 14 24 At3g45240 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 1 4 14 25 At3g45320 hypothetical protein 1 4 15 1 At3g45500 hypothetical protein 1 4 15 2 At3g45560 "zinc finger (C3HC4-type RING finger) family protein contains Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 1 4 15 3 At3g48380 expressed protein 1 4 15 4 At3g48430 "zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein contains Pfam domains PF02375: jmjN domain, PF02373: jmjC domain and PF00096: Zinc finger, C2H2 type" 1 4 15 5 At3g48610 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 1 4 15 6 At3g48675 hypothetical protein 1 4 15 7 At3g48850 "mitochondrial phosphate transporter, putative similar to mitochondrial phosphate transporter GI:3318617 from [Arabidopsis thaliana]" 1 4 15 8 At3g48890 cytochrome b5 domain-containing protein similar to SP|O00264 Membrane associated progesterone receptor component (mPR) {Homo sapiens}; contains Pfam profile PF00173: Heme/Steroid binding domain 1 4 15 9 At3g49055 hypothetical protein 1 4 15 10 At3g49120 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|405611|emb|CAA50677" 1 4 15 11 At3g51960 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 1 4 15 12 At3g52000 serine carboxypeptidase S10 family protein similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase 1 4 15 13 At3g52120 "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF01805: Surp module" 1 4 15 14 At3g52170 expressed protein 1 4 15 15 At3g52330 "F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 1 4 15 16 At3g52380 "33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to chloroplast RNA-binding protein (cp33) GB:BAA06523 (Arabidopsis thaliana) (Plant Mol. Biol. 27 (3), 529-539 (1995)); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 4 15 17 At3g52550 hypothetical protein 1 4 15 18 At3g52590 "ubiquitin extension protein 1 (UBQ1) / 60S ribosomal protein L40 (RPL40B) identical to GI:166929, GI:166930" 1 4 15 19 At3g55120 chalcone-flavanone isomerase / chalcone isomerase (CHI) identical to SP|P41088 1 4 15 20 At3g55160 expressed protein 1 4 15 21 At3g55360 "3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to synaptic glycoprotein SC2 spliced variant from Homo sapiens [EMBL:AF038958], SC2 from Rattus sp. [gi:256994]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544" 1 4 15 22 At3g55400 methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) identical to methionyl-tRNA synthetase MEtRS [Arabidopsis thaliana] GI:2266985 1 4 15 23 At3g55590 "GDP-mannose pyrophosphorylase, putative strong similarity to GDP-mannose pyrophosphorylase from Arabidopsis thaliana [GI:3598958], Pichia angusta [GI:7331158]; contains Pfam profile PF00483 Nucleotidyl transferase" 1 4 15 24 At3g55640 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 15 25 At3g55800 "sedoheptulose-1,7-bisphosphatase, chloroplast / sedoheptulose-bisphosphatase identical to SP|P46283 Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE) {Arabidopsis thaliana}" 1 4 16 1 At3g55850 amidohydrolase family protein weak similarity to SP|Q06555 Exoenzymes regulatory protein aepA precursor {Erwinia carotovora}; contains Pfam profile PF01979: Amidohydrolase family 1 4 16 2 At3g58720 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 16 3 At3g58780 agamous-like MADS box protein AGL1 / shatterproof 1 (AGL1) (SHP1) identical to SP|P29381 Agamous-like MADS box protein AGL1 (Protein Shatterproof 1) {Arabidopsis thaliana} 1 4 16 4 At3g58960 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 5 At3g59020 importin beta-2 subunit family protein similar to D-Importin 7/RanBP7 [Drosophila melanogaster] GI:7542336; contains Pfam profile PF03810: Importin-beta N-terminal domain 1 4 16 6 At3g59170 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 7 At3g59230 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 8 At3g59370 "expressed protein hypothetical protein F12F1.4 - Arabidopsis thaliana, EMBL:AC002131" 1 4 16 9 At3g59410 "protein kinase family protein low similarity to GCN2 eIF2alpha kinase [Mus musculus] GI:6066585; contains Pfam profiles PF03129: Anticodon binding domain, PF00069: Protein kinase domain" 1 4 16 10 At3g62100 "auxin-responsive protein, putative similar to SP|O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana}; contains Pfam profile: PF02309: AUX/IAA family" 1 4 16 11 At3g62160 "transferase family protein low similarity to Taxus cuspidata transferases: 10-deacetylbaccatin III-10-O-acetyl transferase GI:6746554, taxadienol acetyl transferase GI:6978038, 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase GI:11559716; contains Pfam profile PF02458 transferase family" 1 4 16 12 At3g62340 WRKY family transcription factor 1 4 16 13 At3g62400 "expressed protein cytochrome c oxidase subunit 5c - Oryza sativa, EMBL:AB027123" 1 4 16 14 At3g62570 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 1 4 16 15 At3g62630 expressed protein 1 4 16 16 At3g62770 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); putative proteins - different species 1 4 16 17 At3g62830 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains non-consensus CA donor splice site at exon 1 and TA acceptor splice site at exon 2 1 4 16 18 At4g01690 protoporphyrinogen oxidase (PPOX) identical to SP|P55826 1 4 16 19 At4g01740 "DC1 domain-containing protein similar to T15B16.6 similar to A. thaliana CHP-rich hypothetical proteins encoded by T10M13, GenBank accession number AF001308" 1 4 16 20 At4g01900 P II nitrogen sensing protein (GLB I) identical to P II nitrogen sensing protein GLB I (GI:7268574) [Arabidopsis thaliana]; similar to nitrogen regulatory protein P-II (PII signal transducing protein) (SP:O30794) {Nostoc punctiforme} 1 4 16 21 At4g01930 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 16 22 At4g02075 "zinc finger (C3HC4-type RING finger) family protein contains InterPro Entry IPR001841 Zn-finger, RING" 1 4 16 23 At4g02130 "glycosyl transferase family 8 protein low similarity to lgtC of Neisseria sp., GenBank accession number U14554, U65788; contains Pfam glycosyl transferase family 8 domain PF01501" 1 4 16 24 At4g02270 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 1 4 16 25 At4g02330 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 4 17 1 At4g05270 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 4 17 2 At4g05320 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 1 4 17 3 At4g05520 "calcium-binding EF hand family protein similar to EH-domain containing protein 1 from {Mus musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9, receptor-mediated endocytosis 1 from [Caenorhabditis elegans] GI:13487775, GI:13487777, GI:13487779; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 1 4 17 4 At4g05570 hypothetical protein 1 4 17 5 At4g06603 expressed protein 1 4 17 6 At4g06728 hypothetical protein 1 4 17 7 At4g07470 hypothetical protein 1 4 17 8 At4g07515 expressed protein 1 4 17 9 At4g10680 transcription factor IIB (TFIIB) family protein contains Pfam profile: PF00382 transcription factor TFIIB repeat 1 4 17 10 At4g10740 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 17 11 At4g10895 Expressed protein 1 4 17 12 At4g10930 expressed protein 1 4 17 13 At4g11080 high mobility group (HMG1/2) family protein similar to SP|P40618 High mobility group protein HMG2A {Gallus gallus}; contains Pfam profile PF00505: HMG (high mobility group) box 1 4 17 14 At4g11140 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6 - Lycopersicon esculentum, PID:g2213785" 1 4 17 15 At4g11300 expressed protein 1 4 17 16 At4g11360 zinc finger (C3HC4-type RING finger) family protein (RHA1b) identical to RING-H2 finger protein RHA1b [Arabidopsis thaliana] GI:3790567 1 4 17 17 At4g14100 expressed protein 1 4 17 18 At4g14130 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (XTR7) almost identical to xyloglucan endotransglycosylase-related protein XTR7 GI:1244760 from [Arabidopsis thaliana], one amino acid difference" 1 4 17 19 At4g14240 expressed protein contains Pfam profile PF01595: Domain of unknown function 1 4 17 20 At4g14300 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative " 1 4 17 21 At4g14390 ankyrin repeat family protein contains Pfam profile: PF00023 ankyrin repeat 1 4 17 22 At4g14450 expressed protein 1 4 17 23 At4g14605 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 4 17 24 At4g14660 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P52433 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RPB7) {Rattus norvegicus}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 1 4 17 25 At4g17020 "transcription factor-related contains weak similarity to Swiss-Prot:Q92759 TFIIH basal transcription factor complex p52 subunit (Basic transcription factor 52 kDa subunit, BTF2-p52, General transcription factor IIH polypeptide 4) [Homo sapiens]" 1 4 18 1 At4g17060 expressed protein 1 4 18 2 At4g17220 expressed protein 1 4 18 3 At4g17270 Mo25 family protein similar to MO25 protein (early mouse development protein family) [Mouse] SWISS-PROT:Q06138 1 4 18 4 At4g17483 palmitoyl protein thioesterase family protein 1 4 18 5 At4g17520 "nuclear RNA-binding protein, putative similar to nuclear RNA binding protein GI:6492264 from [Arabidopsis thaliana]" 1 4 18 6 At4g17660 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 1 4 18 7 At4g17710 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 1 4 18 8 At4g20310 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein weak similarity to SP|O54862 Membrane-bound transcription factor site 2 protease (EC 3.4.24.-) (Sterol-regulatory element-binding proteins intramembrane protease){Cricetulus griseus}; contains Pfam profile PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 1 4 18 9 At4g20370 twin sister of FT protein (TSF) / TFL1 like protein identical to SP|Q9S7R5 TWIN SISTER of FT protein (TFL1 like protein) {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 1 4 18 10 At4g20530 "receptor-like protein kinase-related kinase like proteins, Arabidopsis contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069" 1 4 18 11 At4g20710 hypothetical protein 1 4 18 12 At4g20880 ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) identical to ethylene-regulated nuclear protein [Arabidopsis thaliana] gi|2765442|emb|CAA75349 1 4 18 13 At4g20940 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to leucine-rich repeat receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558" 1 4 18 14 At4g21110 G10 family protein contains Pfam profile: PF01125 G10 protein 1 4 18 15 At4g21160 zinc finger and C2 domain protein (ZAC) identical to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 1 4 18 16 At4g23750 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6 - Lycopersicon esculentum,PID:g2213785" 1 4 18 17 At4g23800 high mobility group (HMG1/2) family protein similar to HMG2B [Homo sapiens] GI:32335; contains Pfam profile PF00505: HMG (high mobility group) box 1 4 18 18 At4g23940 "FtsH protease, putative contains similarity to zinc dependent protease GI:7650138 from [Arabidopsis thaliana]" 1 4 18 19 At4g24000 "cellulose synthase family protein similar to cellulose synthase from Gossypium hirsutum [gi:1706956], cellulose synthase-5 from Zea mays [gi:9622882]" 1 4 18 20 At4g24160 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 4 18 21 At4g24210 "F-box family protein / SLEEPY1 protein contains Pfam PF00646: F-box domain; similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens]; identified as SLEEPY1 in McGinnis, et al, Plant Cell (2003) 15: 1120-1130." 1 4 18 22 At4g24330 "expressed protein hypothetical protein - Caenorhabditis elegans,PID:e1350884" 1 4 18 23 At4g24390 F-box family protein (FBX14) similar to transport inhibitor response 1 protein GI:8777429 from [Arabidopsis thaliana] 1 4 18 24 At4g26960 expressed protein 1 4 18 25 At4g27010 expressed protein ; expression supported by MPSS 1 4 19 1 At4g27170 2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4 identical to SP|P15460 1 4 19 2 At4g27250 "dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family similar to dihydrokaempferol 4-reductase, Ipomoea purpurea (GI:4239849), Medicago sativa, PIR2:S61416" 1 4 19 3 At4g27420 "ABC transporter family protein D.melanogaster P element CaSpeR-1 gene (white protein),PID:g870996" 1 4 19 4 At4g27470 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 19 5 At4g27610 expressed protein 1 4 19 6 At4g27630 expressed protein 1 4 19 7 At4g30250 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 1 4 19 8 At4g30310 "ribitol kinase, putative similar to ribitol kinase [Klebsiella pneumoniae] gi|2905643|gb|AAC26495" 1 4 19 9 At4g30470 "cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Saccharum officinarum [GI:3341511]" 1 4 19 10 At4g30510 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); similar to several hypothetical proteins 1 4 19 11 At4g30670 expressed protein 1 4 19 12 At4g30720 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803),PIR2:S76076" 1 4 19 13 At4g30850 "expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073)" 1 4 19 14 At4g30900 expressed protein 1 4 19 15 At4g33430 brassinosteroid insensitive 1-associated receptor kinase 1 (BAK1) / somatic embryogenesis receptor-like kinase 3 (SERK3) identical to SP|Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor (EC 2.7.1.37) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) {Arabidopsis thaliana}; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; identical to cDNA somatic embryogenesis receptor-like kinase 3 (SERK3) GI:14573458 1 4 19 16 At4g33490 "nucellin protein, putative similar to nucellin GI:2290202 from [Hordeum vulgare]" 1 4 19 17 At4g33630 expressed protein 1 4 19 18 At4g33670 "L-galactose dehydrogenase (L-GalDH) identical to L-galactose dehydrogenase [Arabidopsis thaliana] GI:16555790; similar to L-fucose dehydrogenase [Pseudomonas sp.] GI:829054; contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 1 4 19 19 At4g33850 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 1 4 19 20 At4g33890 expressed protein 1 4 19 21 At4g34030 "methylcrotonyl-CoA carboxylase beta chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 2 (MCCB) identical to SP|Q9LDD8 Methylcrotonyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta subunit) {Arabidopsis thaliana}; contains Pfam profile: PF01039 carboxyl transferase domain" 1 4 19 22 At4g34070 expressed protein 1 4 19 23 AT5G57480 PC-1 D12 1 4 19 24 3XSSC PC-1 D24 1 4 19 25 AT1G29930 PC-1 H12 1 4 20 1 3XSSC PC-1 H24 1 4 20 2 AT3G44150 PC-1 L12 1 4 20 3 3XSSC PC-1 L24 1 4 20 4 AT4G00810 PC-1 P12 1 4 20 5 3XSSC PC-1 P24 1 4 20 6 At4g36630 expressed protein 1 4 20 7 At4g36680 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat; identical to cDNA membrane-associated salt-inducible protein like GI:2632060 1 4 20 8 At4g36820 "hypothetical protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 1 4 20 9 At4g36870 BEL1-like homeobox 2 protein (BLH2) 1 4 20 10 At4g37050 "patatin, putative similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734" 1 4 20 11 At4g37110 expressed protein 1 4 20 12 At4g37270 "cadmium/zinc-transporting ATPase, putative (HMA1) contains InterPro accession IPR001757: ATPase, E1-E2 type; identical to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC 3.6.3.5) (Swiss-Prot:Q9M3H5) [Arabidopsis thaliana]; identical to cDNA putative transcription factor (MYB73) mRNA, partial cds GI:3941503" 1 4 20 13 At4g37320 cytochrome P450 family protein 1 4 20 14 At4g39920 tubulin folding cofactor C / Porcino (POR) identical to tubulin-folding cofactor C (Porcino; POR) GI:20514261 from [Arabidopsis thaliana]; identical to cDNA tubulin folding cofactor C GI:20514260 1 4 20 15 At4g39960 "DNAJ heat shock family protein similar to SP|Q9S5A3 Chaperone protein dnaJ {Listeria monocytogenes}; contains Pfam profiles PF00226 DnaJ domain, PF01556 DnaJ C terminal region, PF00684 DnaJ central domain (4 repeats)" 1 4 20 16 At4g32730 myb family transcription factor identical to PC-MYB1 GI:5678826 from [Arabidopsis thaliana]; 1 4 20 17 At5g01050 "laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773" 1 4 20 18 At5g01220 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase / sulfolipid synthase (SQD2) identical to GI:20302857 1 4 20 19 At5g01240 "amino acid permease, putative strong similarity to AUX1 GI:1531758 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 1 4 20 20 At5g01410 "stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963" 1 4 20 21 At5g01470 expressed protein 1 4 20 22 At5g04170 calcium-binding EF hand family protein low similarity to peflin [Homo sapiens] GI:6015440; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 4 20 23 At5g04220 C2 domain-containing protein (sytC) GC donor splice site at exon 3; similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 1 4 20 24 At5g04410 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) protein; supporting cDNA gi|6456750|gb|AF201456.1|AF201456 1 4 20 25 At5g04460 expressed protein 1 4 21 1 At5g04650 "hypothetical protein predicted protein, Arabidopsi thaliana" 1 4 21 2 At5g04710 "aspartyl aminopeptidase, putative similar to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21) {Homo sapiens}; contains Pfam profile PF02127: Aminopeptidase I zinc metalloprotease (M18)" 1 4 21 3 At5g04850 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 4 21 4 At5g04900 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 1 4 21 5 At5g07460 "peptide methionine sulfoxide reductase, putative similar to peptide methionine sulfoxide reductase (msr) [Arabidopsis thaliana] GI:4884033; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase" 1 4 21 6 At5g07510 glycine-rich protein (GRP14) oleosin; glycine-rich protein 14 (GRP14) PMID:11431566; PIR:JQ1063 1 4 21 7 At5g07680 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 1 4 21 8 At5g07760 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 1 4 21 9 At5g07940 expressed protein 1 4 21 10 At5g08000 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 1 4 21 11 At5g08160 "serine/threonine protein kinase, putative identical to serine/threonine protein kinase [Arabidopsis thaliana] gi|2109293|gb|AAB69123" 1 4 21 12 At5g08190 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative similar to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein) (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 1 4 21 13 At5g11240 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to uncharacterized protein KIAA0007 (GI:1663708) {Homo sapiens} 1.2e-11 1 4 21 14 At5g11300 "cyclin, putative (CYC3b) similar to cyclin 3a [Arabidopsis thaliana] GI:509425; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain; identical to cDNA cyc3b mRNA for cyclin 3b protein GI:728520" 1 4 21 15 At5g11470 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 1 4 21 16 At5g11530 embryonic flower 1 (EMF1) identical to embryonic flower 1 [Arabidopsis thaliana] GI:15430697 1 4 21 17 At5g11690 "mitochondrial import inner membrane translocase subunit Tim17, putative similar to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17" 1 4 21 18 At5g11750 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 1 4 21 19 At5g11930 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 1 4 21 20 At5g11990 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 4 21 21 At5g15130 "WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain; TMV response-related gene product, Nicotiana tabacum, EMBL:AB024510" 1 4 21 22 At5g15190 expressed protein 1 4 21 23 At5g15340 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 4 21 24 At5g15410 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC2) identical to cyclic nucleotide-gated cation channel GI:3894399 from [Arabidopsis thaliana] 1 4 21 25 At5g15550 "transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak);" 1 4 22 1 At5g15610 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 1 4 22 2 At5g15770 "GCN5-related N-acetyltransferase (GNAT) family protein similar to SP|O93806 Glucosamine-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase) {Candida albicans}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 1 4 22 3 At5g15802 expressed protein 1 4 22 4 At5g18450 "AP2 domain-containing transcription factor, putative DREB2A, Arabidopsis thaliana, EMBL:AB007790" 1 4 22 5 At5g18500 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 22 6 At5g18630 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 1 4 22 7 At5g18680 "F-box family protein / tubby family protein similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein (GI:6730158) [Mus musculus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family" 1 4 22 8 At5g18830 squamosa promoter-binding protein-like 7 (SPL7) identical to squamosa promoter binding protein-like 7 [Arabidopsis thaliana] GI:5931635; contains Pfam profile PF03110: SBP domain 1 4 22 9 At5g18890 inosine-uridine preferring nucleoside hydrolase family protein contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase 1 4 22 10 At5g19030 "RNA recognition motif (RRM)-containing protein low similarity to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis} SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 4 22 11 At5g19080 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 22 12 At5g22430 expressed protein 1 4 22 13 At5g22490 condensation domain-containing protein contains Pfam profile PF00668: Condensation domain 1 4 22 14 At5g22640 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein contains Pfam profile PF02493: MORN repeat 1 4 22 15 At5g22680 hypothetical protein 1 4 22 16 At5g22850 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 1 4 22 17 At5g22890 "zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type" 1 4 22 18 At5g23070 "thymidine kinase, putative similar to thymidine kinase [Oryza sativa] SWISS-PROT:O81263" 1 4 22 19 At5g23100 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 4 22 20 At5g25770 expressed protein 1 4 22 21 At5g25830 "zinc finger (GATA type) family protein GATA transcription factor, Arabidopsis thaliana, PIR:T05288" 1 4 22 22 At5g26000 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to Myrosinase precursor (Sinigrinase) (SP:P37702) [Arabidopsis thaliana] 1 4 22 23 At5g26040 histone deacetylase family protein (HDA2) identical to HDA2 [Arabidopsis thaliana] GI:21105771; similar to SP|Q96DB2 Histone deacetylase 11 (HD11) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 1 4 22 24 At5g26200 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 22 25 At5g26260 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 4 23 1 At5g26717 hypothetical protein 1 4 23 2 At5g26720 expressed protein 1 4 23 3 At5g33280 "chloride channel-like (CLC) protein, putative similar to CLC-c, At5g49890 [Arabidopsis thaliana] and chloride channel protein ClC-1 - Nicotiana tabacum, PIR:T02939" 1 4 23 4 At5g33340 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 4 23 5 At5g34780 "dehydrogenase E1 component family protein similar to SP|P50136 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase component alpha chain) {Mus musculus}; contains Pfam profile PF00676: Dehydrogenase E1 component" 1 4 23 6 At5g34860 hypothetical protein 1 4 23 7 At5g35020 hypothetical protein 1 4 23 8 At5g35100 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 4 23 9 At5g35300 hypothetical protein 1 4 23 10 At5g35360 "acetyl-CoA carboxylase, biotin carboxylase subunit (CAC2) identical to acetyl-CoA carboxylase, biotin carboxylase subunit (CAC2) [Arabidopsis thaliana] GI:1905876" 1 4 23 11 At5g38490 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 1 4 23 12 At5g38550 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 1 4 23 13 At5g38710 "proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative similar to proline oxidase, mitochondrial precursor (Osmotic stress- induced proline dehydrogenase) [Arabidopsis thaliana] SWISS-PROT:P92983" 1 4 23 14 At5g38770 hypothetical protein 1 4 23 15 At5g38950 germin-like protein-related contains some similarity to germin-like protein GI:5869975 from [Triticum aestivum] 1 4 23 16 At5g38990 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 23 17 At5g39190 germin-like protein (GER2) identical to germin-like protein subfamily 1 member 20 [SP|P92996] 1 4 23 18 At5g39240 expressed protein ; expression supported by MPSS 1 4 23 19 At5g42080 "GTP-binding protein / phragmoplastin, putative strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family" 1 4 23 20 At5g42110 expressed protein 1 4 23 21 At5g42280 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 23 22 At5g42330 expressed protein 1 4 23 23 At5g42510 disease resistance-responsive family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 4 23 24 At5g42580 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; similar to flavone synthase II (GI:5081817) [Gerbera hybrida]. 1 4 23 25 At5g42750 expressed protein 1 4 24 1 At5g42790 20S proteasome alpha subunit F1 (PAF1) (gb|AAC32062.1) 1 4 24 2 At5g45340 cytochrome P450 family protein similar to SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 1 4 24 3 At5g45370 nodulin-related / integral membrane family protein contains Pfam profile:PF00892 integral membrane protein DUF6 1 4 24 4 At5g45540 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594; expression supported by MPSS" 1 4 24 5 At5g45590 expressed protein 1 4 24 6 At5g45740 hypothetical protein 1 4 24 7 At5g45775 60S ribosomal protein L11 (RPL11D) 1 4 24 8 At5g45940 MutT/nudix family protein contains Pfam profile PF00293: NUDIX domain 1 4 24 9 At5g46000 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 1 4 24 10 At5g48570 "peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative similar to rof1 [Arabidopsis thaliana] GI:1373396" 1 4 24 11 At5g48620 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 4 24 12 At5g48750 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana];" 1 4 24 13 At5g48810 cytochrome b5 identical to cytochrome b5 [Arabidopsis thaliana] GI:4240122; strong similarity to Cytochrome B5 SP:P49098 from [Nicotiana tabacum] 1 4 24 14 At5g48970 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 24 15 At5g49020 protein arginine N-methyltransferase family protein similar to protein arginine methyltransferase [Mus musculus] GI:5257221 1 4 24 16 At5g49200 WD-40 repeat family protein / zfwd4 protein (ZFWD4) contains 6 WD-40 repeats (PF00400); contains Zinc finger C-x8-C-x5-C-x3-H type domain (PF00642); identical to zfwd4 protein (GI:12057170) [Arabidopsis thaliana] 1 4 24 17 At5g49240 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain; contains similarity to two-component response regulator proteins 1 4 24 18 At5g51960 expressed protein 1 4 24 19 At5g52020 AP2 domain-containing protein low similarity to DREB1B GI:3738226 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain 1 4 24 20 At5g52180 expressed protein 1 4 24 21 At5g52230 expressed protein 1 4 24 22 At5g52410 expressed protein 1 4 24 23 At5g52470 fibrillarin 1 (FBR1) (FIB1) (SKIP7) identical to fibrillarin 1 GI:9965653 from [Arabidopsis thaliana]; C-terminus identical to SKP1 interacting partner 7 GI:10716959 from [Arabidopsis thaliana]; contains Pfam domain PF01269: Fibrillarin 1 4 24 24 At5g52630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 24 25 At5g52670 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 1 4 25 1 At5g55350 "membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related contains similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 1 4 25 2 At5g55410 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 4 25 3 At5g55570 expressed protein 1 4 25 4 At5g55610 expressed protein 1 4 25 5 At5g55780 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 25 6 At5g55840 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 1 4 25 7 At5g56000 "heat shock protein 81-4 (HSP81-4) nearly identical to heat shock protein hsp81.4 [Arabidopsis thaliana] GI:1906828; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 1 4 25 8 At5g56060 hypothetical protein 1 4 25 9 At5g58640 selenoprotein-related contains weak similarity to Selenoprotein W (Swiss-Prot:P49904) [Rattus norvegicus] 1 4 25 10 At5g58700 phosphoinositide-specific phospholipase C family protein contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 1 4 25 11 At5g58860 cytochrome P450 86A1 (CYP86) (CYP86A1) / CYPLXVI / P450-dependent fatty acid omega-hydroxylase identical to Cytochrome P450 86A1 (CYPLXVI) (P450-dependent fatty acid omega-hydroxylase) (SP:P48422) [Arabidopsis thaliana] 1 4 25 12 At5g58920 expressed protein 1 4 25 13 At5g59060 expressed protein ; expression supported by MPSS 1 4 25 14 At5g59110 "subtilisin-like serine protease-related similar to prepro-cucumisin GI:807698 from [Cucumis melo], subtilisin-like protease C1 [Glycine max] GI:13325079" 1 4 25 15 At5g59270 lectin protein kinase family protein contains Pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain 1 4 25 16 At5g59320 lipid transfer protein 3 (LTP3) identical to lipid transfer protein 3 from Arabidopsis thaliana [gi:8571921]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 4 25 17 At5g61950 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 1 4 25 18 At5g62000 "transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393" 1 4 25 19 At5g62165 MADS-box protein (AGL42) 1 4 25 20 At5g62220 exostosin family protein contains Pfam profile: PF03016 Exostosin family 1 4 25 21 At5g62400 hypothetical protein 1 4 25 22 At5g62470 myb family transcription factor (MYB96) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 4 25 23 At5g62600 transportin-SR-related contains weak similarity to transportin-SR (GI:5052414) [Homo sapiens] 1 4 25 24 At5g62660 F-box family protein contains Pfam profile: PF00646 F-box domain 1 4 25 25 At5g65207 expressed protein 1 4 26 1 At5g65240 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 1 4 26 2 At5g65420 "cyclin, putative similar to cyclin D2.1 protein [Nicotiana tabacum] GI:4160298; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 1 4 26 3 At5g65460 kinesin motor protein-related contains similarity to kinesin heavy chain 1 4 26 4 At5g65630 DNA-binding bromodomain-containing protein similar to 5.9 kb fsh membrane protein [Drosophila melanogaster] GI:157455; contains Pfam profile PF00439: Bromodomain 1 4 26 5 At5g65683 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 1 4 26 6 At5g65840 expressed protein 1 4 26 7 At5g65900 "DEAD/DEAH box helicase, putative contains Pfam profiles PF00270:DEAD/DEAH box helicase and PF00271: Helicase conserved C-terminal domain; identical to cDNA RH27 helicase, partial GI:4033334" 1 4 26 8 ath-MIR159a miRNA gene Arabidopsis thaliana miR159a stem-loop 1 4 26 9 ath-MIR169d miRNA gene Arabidopsis thaliana miR169d stem-loop 1 4 26 10 3xSSC 3xSSC 1 4 26 11 3xSSC 3xSSC 1 4 26 12 3xSSC 3xSSC 1 4 26 13 3xSSC 3xSSC 1 4 26 14 3xSSC 3xSSC 1 4 26 15 3xSSC 3xSSC 1 4 26 16 At3g44805 hypothetical protein 1 4 26 17 At3g44860 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 1 4 26 18 At3g45030 "40S ribosomal protein S20 (RPS20A) 40S ribsomomal proteinS20, Arabidopsis thaliana, pir:T12992" 1 4 26 19 At3g45080 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 1 4 26 20 At3g45240 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 1 4 26 21 At3g45320 hypothetical protein 1 4 26 22 At3g45500 hypothetical protein 1 4 26 23 At3g45560 "zinc finger (C3HC4-type RING finger) family protein contains Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 1 4 26 24 Blank Blank 1 4 26 25 Blank Blank 2 1 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 2 1 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 1 1 5 atc07 Randomly generated negative control 2 1 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 2 1 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 1 8 atc03 Randomly generated negative control 2 1 1 9 At1g01050 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase" 2 1 1 10 At1g01100 60S acidic ribosomal protein P1 (RPP1A) similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from [Arabidopsis thaliana] 2 1 1 11 At1g01230 ORMDL family protein contains Pfam domain PF04061: ORMDL family 2 1 1 12 At1g01300 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 2 1 1 13 At1g01480 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 [GI:166578] from [Arabidopsis thaliana] 2 1 1 14 At1g01540 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 1 1 15 At1g01710 "acyl-CoA thioesterase family protein contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain" 2 1 1 16 At1g01760 adenosine-deaminase family / editase family similar to double-stranded RNA-specific editase GB:AAF69673 GI:7770275 from [Danio rerio] 2 1 1 17 At1g04350 "2-oxoglutarate-dependent dioxygenase, putative Similar to Arabidopsis 2A6 (gb|X83096) and to tomato ethylene synthesis regulatory protein E8 (SP|P10967); EST gb|T76913 comes from this gene" 2 1 1 18 At1g04410 "malate dehydrogenase, cytosolic, putative strong similarity to malate dehydrogenase from Mesembryanthemum crystallinum [SP|O24047], Medicago sativa [SP|O48905], Prunus persica [GI:15982948]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 2 1 1 19 At1g04570 integral membrane transporter family protein contains 8 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to hypothetical protein GB:AAD38263 2 1 1 20 At1g04610 flavin-containing monooxygenase / FMO (YUCCA3) identical to gi:16555356 2 1 1 21 At1g04790 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 1 1 22 At1g04850 ubiquitin-associated (UBA)/TS-N domain-containing protein weak similarity to SP|P45974 Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) {Homo sapiens}; contains Pfam profile PF00627: UBA/TS-N domain 2 1 1 23 At1g04985 expressed protein 2 1 1 24 At1g05040 hypothetical protein 2 1 1 25 At1g07650 "leucine-rich repeat transmembrane protein kinase, putative similar to GB:AAC50043 from [Arabidopsis thaliana] (Plant Mol. Biol. 37 (4), 587-596 (1998))" 2 1 2 1 At1g07700 thioredoxin family protein low similarity to thioredoxin [Gallus gallus] GI:212766; contains Pfam profile: PF00085 Thioredoxin 2 1 2 2 At1g07795 expressed protein 2 1 2 3 At1g07840 leucine zipper factor-related similar to charged amino acid rich leucine zipper factor-1 (GI:12061569) {Mus musculus} 2 1 2 4 At1g07960 thioredoxin family protein low similarity to protein disulfide isomerase 4 [Giardia intestinalis] GI:13489047; contains Pfam profile PF00085: Thioredoxin 2 1 2 5 At1g08000 zinc finger (GATA type) family protein similar to PIR:T05288 from [Arabidopsis thaliana] 2 1 2 6 At1g08130 "DNA ligase / polydeoxyribonucleotide synthase [ATP] identical to SP|Q42572 DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) {Arabidopsis thaliana}; contains Pfam profiles: PF01068 ATP dependent DNA ligase domain, PF04679 ATP dependent DNA ligase C terminal region, PF04675 DNA ligase N terminus" 2 1 2 7 At1g08180 expressed protein 2 1 2 8 At1g10760 starch excess protein (SEX1) identical to SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA gi|12044357|gb|AF312027.1|AF312027 2 1 2 9 At1g10820 expressed protein similar to hypothetical protein GB:AAB71979 2 1 2 10 At1g10980 expressed protein ; expression supported by MPSS 2 1 2 11 At1g11040 DNAJ chaperone C-terminal domain-containing protein contains Pfam profile PF01556: DnaJ C terminal region 2 1 2 12 At1g11210 expressed protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 2 1 2 13 At1g11270 F-box family protein contains F-box domain Pfam:PF00646 2 1 2 14 At1g11400 expressed protein 2 1 2 15 At1g11460 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 2 1 2 16 At1g14240 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to nod factor binding lectin-nucleotide phosphohydrolase [Dolichos biflorus] GI:4868375; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 2 1 2 17 At1g14280 "phytochrome kinase, putative contains similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 [Arabidopsis thaliana]" 2 1 2 18 At1g14430 glyoxal oxidase-related low similarity to glyoxal oxidase precursor (glx1) [Phanerochaete chrysosporium] GI:1050302 2 1 2 19 At1g14490 DNA-binding protein-related contains similarity to DNA-binding proteins 2 1 2 20 At1g14660 "sodium proton exchanger, putative (NHX8) similar to Na+ H+ antiporter GB:CAA69925 GI:1655702 from (Xenopus laevis); similar to putative Na+/H+ antiporter SOS1 [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 2 1 2 21 At1g14687 zinc finger homeobox family protein / ZF-HD homeobox family protein 2 1 2 22 At1g14820 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 [Saccharomyces cerevisiae (Baker's yeast)] 2 1 2 23 At1g14870 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 2 1 2 24 At1g17550 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase 2C GI:3242077 from (Arabidopsis thaliana) 2 1 2 25 At1g17615 "disease resistance protein (TIR-NBS class), putative domain signature TIR exists, suggestive of a disease resistance protein." 2 1 3 1 At1g17770 "SET domain-containing protein (SUVH7) contains Pfam profiles: PF05033: Pre-SET motif, PF00856 SET domain; identical to cDNA SUVH7 (SUVH7) GI:13517754" 2 1 3 2 At1g17810 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 2 1 3 3 At1g17970 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 1 3 4 At1g18030 "protein phosphatase 2C, putative / PP2C, putative contains similarity to protein phosphatase 2C GI:3777604 from [Rattus norvegicus]" 2 1 3 5 At1g18220 hypothetical protein 2 1 3 6 At1g18290 hypothetical protein 2 1 3 7 At1g21150 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 2 1 3 8 At1g21230 "wall-associated kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] GI:3549626; expressed in leaves and stems & induced by salicylic acid or INA (PMID:10380805)" 2 1 3 9 At1g21390 expressed protein 2 1 3 10 At1g21450 scarecrow-like transcription factor 1 (SCL1) identical to scarecrow-like 1 GB:AAF21043 GI:6644390 from [Arabidopsis thaliana] 2 1 3 11 At1g21640 "ATP-NAD kinase family protein contains similarity to NAD kinase [Homo sapiens] gi|20070086|gb|AAM01195; contains Pfam domain, PF01513: ATP-NAD kinase" 2 1 3 12 At1g21690 "replication factor C 37 kDa, putative Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit (Replication factor C 37 kDa subunit, A1 37 kDa subunit, RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains Pfam domain, PF00004: ATPase, AAA family" 2 1 3 13 At1g21860 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 2 1 3 14 At1g21910 AP2 domain-containing transcription factor family protein similar to TINY GB:CAA64359 GI:1246403 from [Arabidopsis thaliana] 2 1 3 15 At1g24480 hypothetical protein 2 1 3 16 At1g24530 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina}; contains 7 WD-40 repeats (PF00400) 2 1 3 17 At1g24851 hypothetical protein 2 1 3 18 At1g25210 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein contains Pfam domain PF03331: UDP-3-O-acyl N-acetylglycosamine deacetylase 2 1 3 19 At1g25360 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 3 20 At1g25410 adenylate isopentenyltransferase 6 / adenylate dimethylallyltransferase / cytokinin synthase (IPT6) identical to adenylate isopentenyltransferase (IPT6) [Arabidopsis thaliana] GI:14279064 2 1 3 21 At1g25570 "leucine-rich repeat protein-related contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376" 2 1 3 22 At1g26100 "cytochrome B561 family protein contains Pfam domain, PF03188: Cytochrome b561" 2 1 3 23 At1g29000 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 2 1 3 24 At1g29040 expressed protein 2 1 3 25 At1g29240 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 2 1 4 1 At1g29300 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 2 1 4 2 At1g29440 auxin-responsive family protein similar to auxin-induced protein 6B (SP:P33083) [Glycine max] 2 1 4 3 At1g29500 "auxin-responsive protein, putative similar to auxin-induced protein 6B (SP:P33083) [Glycine max]" 2 1 4 4 At1g29690 expressed protein 2 1 4 5 At1g29750 "leucine-rich repeat transmembrane protein kinase, putative / serine/threonine kinase, putative (RKF1) similar to receptor-like serine/threonine kinase GI:2465923 from [Arabidopsis thaliana]; identical to cDNA receptor-like serine/threonine kinase (RKF1) GI:2465922" 2 1 4 6 At1g32585 VQ motif-containing protein-related contains weak similarity to Pfma:PF05678 VQ motif 2 1 4 7 At1g32660 F-box family protein contains Pfam profile: PF00646 F-box domain 2 1 4 8 At1g32830 "hypothetical protein similar to At2g04970, At2g15200, At2g14140, At3g30450, At4g03990, At5g34895, At3g47270, At2g02200" 2 1 4 9 At1g32900 "starch synthase, putative similar to starch synthase SP:Q42857 from [Ipomoea batatas]" 2 1 4 10 At1g33055 expressed protein 2 1 4 11 At1g33100 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 2 1 4 12 At1g33320 "cystathionine gamma-synthase, chloroplast, putative / O-succinylhomoserine (Thiol)-lyase, putative strong similarity to SP|P55217 Cystathionine gamma-synthase, chloroplast precursor (EC 4.2.99.9) (CGS) (O-succinylhomoserine (Thiol)-lyase) {Arabidopsis thaliana}; contains Pfam profile PF01053: Cys/Met metabolism PLP-dependent enzyme" 2 1 4 13 At1g33400 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 1 4 14 At1g42550 expressed protein 2 1 4 15 At1g42710 hypothetical protein 2 1 4 16 At1g43230 hypothetical protein 2 1 4 17 At1g43415 hypothetical protein 2 1 4 18 At1g43700 VirE2-interacting protein (VIP1) identical to VirE2-interacting protein VIP1 GB:AAF37279 GI:7258340 from [Arabidopsis thaliana] 2 1 4 19 At1g43770 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 2 1 4 20 At1g43995 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GI:4544460 from [Arabidopsis thaliana] 2 1 4 21 At1g44080 "F-box protein-related / C-type lectin-related contains F-box domain Pfam:PF00646, PF00059: Lectin C-type domain" 2 1 4 22 At1g49150 hypothetical protein 2 1 4 23 At1g49210 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 1 4 24 At1g49400 ribosomal protein S17 family protein similar to 40S ribosomal protein S17 GI:1620985 from [Nicotiana plumbaginifolia] 2 1 4 25 At1g49470 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 1 5 1 At1g49630 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 2 1 5 2 At1g49700 expressed protein ; expression supported by MPSS 2 1 5 3 At1g49880 Erv1/Alr family protein similar to SP|Q63042 Augmenter of liver regeneration {Rattus norvegicus}; contains Pfam profile PF04777: Erv1 / Alr family 2 1 5 4 At1g49940 expressed protein contains similarity to putative beta-9 tubulin protein GB:AAF40459 GI:7211988 from [Arabidopsis thaliana] 2 1 5 5 At1g52790 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 1 5 6 At1g52830 auxin-responsive protein / indoleacetic acid-induced protein 6 (IAA6) nearly identical to SP|Q38824 Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6) {Arabidopsis thaliana} 2 1 5 7 At1g52990 "thioredoxin family protein similar to SP|P48384 Thioredoxin M-type, chloroplast precursor (TRX-M) {Pisum sativum}; contains Pfam profile PF00085: Thioredoxin" 2 1 5 8 At1g53040 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 2 1 5 9 At1g53200 expressed protein 2 1 5 10 At1g53265 hypothetical protein 2 1 5 11 At1g53420 serine/threonine protein kinase-related contains 1 predicted transmembrane domain; low similarity to receptor-like serine/threonine kinase [Arabidopsis thaliana] GI:2465923 2 1 5 12 At1g53460 expressed protein 2 1 5 13 At1g56070 "elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe]" 2 1 5 14 At1g56120 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 2 1 5 15 At1g56280 "drought-responsive family protein contains an AT-AC intron 3, potentially contains a frameshift. An alternate model provides a translation more consistent with homologous proteins but lacks the AT-AC intron; similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 2 1 5 16 At1g56320 expressed protein 2 1 5 17 At1g56530 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965;" 2 1 5 18 At1g56580 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 5 19 At1g57560 myb family transcription factor (MYB50) similar to DNA-binding protein GI:19058 from [Hordeum vulgare] 2 1 5 20 At1g57610 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 2 1 5 21 At1g61480 "S-locus protein kinase, putative similar to receptor protein kinase (IRK1) GI:836953 from [Ipomoea trifida]; contains S-locus glycoprotein family domain, Pfam:PF00954" 2 1 5 22 At1g61560 "seven transmembrane MLO family protein / MLO-like protein 6 (MLO6) idenctical to membrane protein Mlo6 [Arabidopsis thaliana] gi|14091582|gb|AAK53799; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]; contains Pfam profile PF03094: Mlo family" 2 1 5 23 At1g61710 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 5 24 At1g61770 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9UBS4 DnaJ homolog subfamily B member 11 precursor Homo sapiens; contains Pfam profile PF00226 DnaJ domain 2 1 5 25 At1g61940 F-box family protein / tubby family protein similar to putative Tub family protein GI:4309738 from [Arabidopsis thaliana] 2 1 6 1 At1g62000 expressed protein 2 1 6 2 At1g62200 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family ; contains non-consensus GA donor site at intron 4 2 1 6 3 At1g62250 expressed protein 2 1 6 4 At1g64960 expressed protein 2 1 6 5 At1g65020 expressed protein 2 1 6 6 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 1 6 7 At1g65200 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 2 1 6 8 At1g65342 hypothetical protein 2 1 6 9 At1g65390 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 2 1 6 10 At1g65580 "endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase II isoform (GI:15418718) [Mus musculus]; contains 6 (5 weak) Pfam: Pf00400 WD domain, G-beta repeats and Pfam PF03372: Endonuclease/Exonuclease/phosphatase family" 2 1 6 11 At1g65650 "ubiquitin carboxyl-terminal hydrolase family 1 protein similar to 26S proteasome regulatory complex subunit p37A [Drosophila melanogaster] GI:6434962; contains Pfam profile PF01088: Ubiquitin carboxyl-terminal hydrolase, family 1" 2 1 6 12 At1g68390 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266; expression supported by MPSS" 2 1 6 13 At1g68450 VQ motif-containing protein contains PF05678: VQ motif 2 1 6 14 At1g68585 expressed protein 2 1 6 15 At1g68640 bZIP family transcription factor (PERIANTHIA) identical to transcription factor PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis thaliana] 2 1 6 16 At1g68810 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 6 17 At1g68870 hypothetical protein 2 1 6 18 At1g69030 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 1 6 19 At1g69080 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 2 1 6 20 At1g71840 "transducin family protein / WD-40 repeat family protein contains Pfam profile:PF00560 Leucine Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic protein kinase domain; Pfam profile:PF00400 WD domain, G-beta repeat (7 copies)" 2 1 6 21 At1g71870 MATE efflux family protein contains Pfam profile PF01554: Uncharacterized membrane protein family 2 1 6 22 At1g72050 "zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type" 2 1 6 23 At1g72090 "radical SAM domain-containing protein / TRAM domain-containing protein contains Pfam profiles PF00919: UPF0004 family protein, PF04055: radical SAM domain protein, PF01938: TRAM domain" 2 1 6 24 At1g72250 kinesin motor protein-related 2 1 6 25 At1g72310 zinc finger (C3HC4-type RING finger) family protein (ATL3) identical to RING-H2 zinc finger protein (ATL3) GB:AF132013 (Arabidopsis thaliana) 2 1 7 1 At1g72500 inter-alpha-trypsin inhibitor heavy chain-related low similarity to Inter-alpha-inhibitor H4 heavy chain [Rattus norvegicus] GI:2292988; contains Pfam profile PF00092: von Willebrand factor type A domain 2 1 7 2 At1g72550 "tRNA synthetase beta subunit family protein contains Pfam profiles: PF03484 phenylalanine-tRNA synthetase, B5 domain, PF03483 B3/4 domain; an isoform contains a non-consensus TG acceptor splice site at a terminal exon." 2 1 7 3 AT5G57480 PC-1 A11 2 1 7 4 3XSSC PC-1 A23 2 1 7 5 AT1G29930 PC-1 E11 2 1 7 6 3XSSC PC-1 E23 2 1 7 7 AT3G44150 PC-1 I11 2 1 7 8 3XSSC PC-1 I23 2 1 7 9 AT4G00810 PC-1 M11 2 1 7 10 3XSSC PC-1 M23 2 1 7 11 At1g75330 "ornithine carbamoyltransferase, chloroplast / ornithine transcarbamylase / OTCase (OTC) identical to SP|O50039 Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) {Arabidopsis thaliana}" 2 1 7 12 At1g75380 wound-responsive protein-related similar to wound inducive gene GI:8096273 from [Nicotiana tabacum] 2 1 7 13 At1g75560 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 1 7 14 At1g75640 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 1 7 15 At1g75830 "plant defensin-fusion protein, putative (PDF1.1) identical to SP|P30224 Cysteine-rich antifungal protein 1 precursor (AFP1) (Anther-specific protein S18 homolog) {Arabidopsis thaliana}" 2 1 7 16 At1g75880 family II extracellular lipase 1 (EXL1) EXL1 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 2 1 7 17 At1g76050 "pseudouridine synthase family protein contains Pfam profiles: PF00849 RNA pseudouridylate synthase, PF01479: S4 domain" 2 1 7 18 At1g76100 plastocyanin identical to plastocyanin GI:1865683 from [Arabidopsis thaliana] 2 1 7 19 At1g78760 F-box family protein contains F-box domain Pfam:PF00646 2 1 7 20 At1g78800 "glycosyl transferase family 1 protein contains similarity to glycosyltransferase GI:871530 from [Saccharomyces cerevisiae], Alg2 mannosyltransferase [gi:3868942] from Rhizomucor pusillus; contains Pfam profile: PF00534 Glycosyl transferases group 1" 2 1 7 21 At1g78920 vacuolar-type H+-translocating inorganic pyrophosphatase (AVPL1) identical to vacuolar-type H+-translocating inorganic pyrophosphatase GI:6901676 from [Arabidopsis thaliana] 2 1 7 22 At1g78970 "lupeol synthase (LUP1) / 2,3-oxidosqualene-triterpenoid cyclase identical to lupeol synthase GI:1762150 from [Arabidopsis thaliana], 2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis thaliana] GI:2738027; contains Pfam profile PF00432: Prenyltransferase and squalene oxidase repeat; contains TIGRfam profile TIGR01787: squalene/oxidosqualene cyclases; identical to cDNA 2,3-oxidosqualene-triterpenoid cyclase GI:2738026" 2 1 7 23 At1g79130 auxin-responsive family protein similar to auxin-induced protein X10A (SP:P33080) [Glycine max] 2 1 7 24 At1g79190 expressed protein 2 1 7 25 At1g79400 "cation/proton exchanger, putative (CHX2) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 2 1 8 1 At1g79440 "succinate-semialdehyde dehydrogenase (SSADH1) similar to succinate-semialdehyde dehydrogenase [NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526; identical to succinic semialdehyde dehydrogenase mRNA, nuclear gene encoding mitochondrial protein GI:6684441; contains TIGRfam profile TIGR01780:succinic semialdehyde dehydrogenase; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein" 2 1 8 2 At2g02000 "glutamate decarboxylase, putative strong similarity to glutamate decarboxylase [Nicotiana tabacum] GI:21327029" 2 1 8 3 At2g02060 "calcium-dependent protein kinase-related / CDPK-related contains TIGRFAM TIGR01557: myb-like DNA-binding domain, SHAQKYF class; contains Pfam PF00249: Myb-like DNA-binding domain; similar to CDPK substrate protein 1; CSP1 (GI:6942190) [Mesembryanthemum crystallinum]." 2 1 8 4 At2g02300 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 2 1 8 5 At2g02370 expressed protein 2 1 8 6 At2g02550 exonuclease family protein contains similarity to exonuclease I [Homo sapiens] gi|4249655|gb|AAD13754 2 1 8 7 At2g02610 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 8 8 At2g02780 "leucine-rich repeat transmembrane protein kinase, putative " 2 1 8 9 At2g02835 hypothetical protein 2 1 8 10 At2g06095 expressed protein 2 1 8 11 At2g06255 expressed protein 2 1 8 12 At2g06820 expressed protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 2 1 8 13 At2g06908 hypothetical protein 2 1 8 14 At2g07240 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 1 8 15 At2g07320 SWIM zinc finger family protein contains Pfam profile PF04434: SWIM zinc finger 2 1 8 16 At2g07779 expressed protein 2 1 8 17 At2g07676 expressed protein 2 1 8 18 At2g15220 "secretory protein, putative similar to NtPRp27 [Nicotiana tabacum] GI:5360263; contains Pfam profile PF04450: Plant Basic Secretory Protein" 2 1 8 19 At2g15280 "reticulon family protein (RTNLB10) low similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311, SP|Q64548 Reticulon 1 (Neuroendocrine-specific protein) {Rattus norvegicus}; contains Pfam profile PF02453: Reticulon" 2 1 8 20 At2g15430 DNA-directed RNA polymerase II 36 kDa polypeptide A / RNA polymerase II subunit 3 (RPB36A) identical to SP|Q39211 DNA-directed RNA polymerase II 36 kDa polypeptide A (EC 2.7.7.6) (RNA polymerase II subunit 3) {Arabidopsis thaliana} 2 1 8 21 At2g15490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 1 8 22 At2g15660 hypothetical protein 2 1 8 23 At2g15730 expressed protein 2 1 8 24 At2g15970 "cold-acclimation protein, putative (FL3-5A3) similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505; identical to cDNA cold acclimation protein WCOR413-like protein alpha form GI:10121840, cold acclimation protein homolog [Arabidopsis thaliana] GI:11127595" 2 1 8 25 At2g16030 expressed protein 2 1 9 1 At2g18876 expressed protein 2 1 9 2 At2g18915 F-box family protein / LOV kelch protein 2 (LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex F-box subunit; identical to Adagio 2 GI:13487070 from [Arabidopsis thaliana]; contains Pfam profiles PF01344: Kelch motif and PF00646: F-box domain; identical to cDNA LOV kelch protein 2 GI:18146957; identical to cDNA Adagio 2 (ADO2) GI:13487069 2 1 9 3 At2g19090 "expressed protein contains Pfam profiles: PF04782 protein of unknown function (DUF632), PF04783 protein of unknown function (DUF630); expression supported by MPSS" 2 1 9 4 At2g19170 subtilase family protein contains similarity to meiotic serine proteinase TMP GI:6468325 from [Lycopersicon esculentum] 2 1 9 5 At2g19380 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); contains Pfam profile PF00096: Zinc finger, C2H2 type" 2 1 9 6 At2g19430 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40 repeats 2 1 9 7 At2g19610 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 2 1 9 8 At2g19640 SET domain-containing protein contains Pfam profile PF00856: SET domain 2 1 9 9 At2g22310 ubiquitin-specific protease 4 (UBP4) identical to GI:2347100 2 1 9 10 At2g22370 expressed protein 2 1 9 11 At2g22560 "kinase interacting protein-related similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia]; weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum" 2 1 9 12 At2g22630 MADS-box protein (AGL17) nearly identical to MADS-box protein AGL17 [Arabidopsis thaliana] GI:862648 2 1 9 13 At2g22800 homeobox-leucine zipper protein 9 (HAT9) / HD-ZIP protein 9 identical to GB:U09341 2 1 9 14 At2g22860 phytosulfokines 2 (PSK2) identical to phytosulfokines 2 (PSK2) from [Arabidopsis thaliana] 2 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 2 1 9 16 At2g23050 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 1 9 17 At2g25890 glycine-rich protein / oleosin 2 1 9 18 At2g25950 expressed protein 2 1 9 19 At2g26130 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 2 1 9 20 At2g26180 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 2 1 9 21 At2g26370 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 2 1 9 22 At2g26430 ania-6a type cyclin (RCY1) nearly identical to ania-6a type cyclin [Arabidopsis thaliana] GI:13924511 2 1 9 23 At2g26580 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein 2 1 9 24 At2g26620 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 1 9 25 At2g29310 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 1 10 1 At2g29360 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 1 10 2 At2g29525 expressed protein 2 1 10 3 At2g29560 "enolase, putative similar to enolase [Spinacia oleracea] gi|8919731|emb|CAB96173" 2 1 10 4 At2g29700 pleckstrin homology (PH) domain-containing protein (PH1) identical to AtPH1 [Arabidopsis thaliana] GI:5926716; contains Pfam profile PF00169: PH domain 2 1 10 5 At2g29760 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 10 6 At2g29930 F-box family protein contains F-box domain Pfam:PF00646 2 1 10 7 At2g29970 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 2 1 10 8 At2g32620 "cellulose synthase family protein similar to Zea mays cellulose synthase-5 [gi:9622882], -4 [gi:9622880], -9 [gi:9622890]" 2 1 10 9 At2g32650 expressed protein contains Pfam PF05899: Protein of unknown function (DUF861) 2 1 10 10 At2g32790 "ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme from [Oryza sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134, SP|P35131; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 1 10 11 At2g32850 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 10 12 At2g33000 ubiquitin-associated (UBA)/TS-N domain-containing protein-related contains weak hit to Pfam F00627: UBA/TS-N domain; supported by tandem duplication of ubiquitin-associated (UBA)/TS-N domain protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis thaliana] 2 1 10 13 At2g33060 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 2 1 10 14 At2g33240 "myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin my5A (SP:Q02440) {Gallus gallus}" 2 1 10 15 At2g33290 "SET domain-containing protein (SUVH2) identical to SUVH2 [Arabidopsis thaliana] GI:13517745; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH2 (SUVH2) GI:13517744" 2 1 10 16 At2g35840 sucrose-phosphatase 1 (SPP1) identical to sucrose-phosphatase (SPP1) [Arabidopsis thaliana] GI:11127757 2 1 10 17 At2g35900 expressed protein 2 1 10 18 At2g36050 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 2 1 10 19 At2g36080 "DNA-binding protein, putative strong similarity to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 2 1 10 20 At2g36260 "iron-sulfur cluster assembly complex protein, putative similar to IscA (putative iron-sulfur cluster assembly protein) [Azotobacter vinelandii] GI:2271523; contains Pfam profile PF01521: HesB-like domain" 2 1 10 21 At2g36310 "inosine-uridine preferring nucleoside hydrolase family protein similar to Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania MajorGI:8569431; contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase" 2 1 10 22 At2g36460 "fructose-bisphosphate aldolase, putative similar to PIR|S65073 fructose-bisphosphate aldolase (EC 4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa]; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 2 1 10 23 At2g36530 enolase identical to SWISS-PROT:P25696 enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate hydro-lyase) [Arabidopsis thaliana] 2 1 10 24 At2g39110 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 2 1 10 25 At2g39180 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 11 1 At2g39340 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 2 1 11 2 At2g39400 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 1 11 3 At2g39550 geranylgeranyl transferase type I beta subunit (GGT-IB) nearly identical to GI:11878247 2 1 11 4 At2g39630 glycosyl transferase family 2 protein similar to dolichyl-phosphate beta-glucosyltransferase from Saccharomyces cerevisiae [SP|P40350]; contains Pfam glycosyltransferase group 2 domain PF00535 2 1 11 5 At2g39730 "ribulose bisphosphate carboxylase/oxygenase activase / RuBisCO activase identical to SWISS-PROT:P10896 ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA)[Arabidopsis thaliana]" 2 1 11 6 At2g39790 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 2 1 11 7 At2g42260 expressed protein and genefinder 2 1 11 8 At2g42300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 11 9 At2g42470 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 2 1 11 10 At2g42510 "spliceosome protein-related contains Pfam domain, PF04938: Survival motor neuron (SMN) interacting protein 1 (SIP1)" 2 1 11 11 At2g42650 60S ribosomal protein-related similar to PBK1 protein (GI:3668141) [Homo sapiens]; weak similarity to 60S ribosomal protein L10a. (Swiss-Prot:Q9SW75) [Chlamydomonas reinhardtii] 2 1 11 12 At2g42710 ribosomal protein L1 family protein 2 1 11 13 At2g42880 "mitogen-activated protein kinase, putative / MAPK, putative (MPK20) mitogen-activated protein kinase (MAPK)(AtMPK20), PMID:12119167" 2 1 11 14 At2g42930 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 2 1 11 15 At2g45610 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 2 1 11 16 At2g45650 MADS-box protein (AGL6) 2 1 11 17 At2g45810 "DEAD/DEAH box helicase, putative " 2 1 11 18 At2g45870 expressed protein contains Pfam profile PF05249: Uncharacterised protein family (UPF0187) 2 1 11 19 At2g46050 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 11 20 At2g46090 "diacylglycerol kinase family protein contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 2 1 11 21 At2g46240 "IQ domain-containing protein / BAG domain-containing protein contains Pfam profiles PF00612: IQ calmodulin-binding motif, PF02179: BAG (Apoptosis regulator Bcl-2 protein) domain" 2 1 11 22 At2g46280 "eukaryotic translation initiation factor 3 subunit 2 / TGF-beta receptor interacting protein 1 / eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to eukaryotic translation initiation factor 3 subunit 2 (SP:Q38884) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies)" 2 1 11 23 At3g01610 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 2 1 11 24 At3g01670 expressed protein 2 1 11 25 At3g01830 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]; Pfam HMM hit: EF hand" 2 1 12 1 At3g01860 expressed protein 2 1 12 2 At3g02010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 12 3 At3g02065 DEAD/DEAH box helicase family protein contains Pfam profile: PF00270 DEAD/DEAH box helicase 2 1 12 4 At3g02200 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 2 1 12 5 At3g02240 expressed protein 2 1 12 6 At3g04860 expressed protein 2 1 12 7 At3g04920 40S ribosomal protein S24 (RPS24A) similar to ribosomal protein S19 GB:445612 [Solanum tuberosum] and similar to ribosomal protein S24 GB:4506703 [Homo sapiens] 2 1 12 8 At3g05090 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to uncharacterized KIAA1449 protein (gi:7959157) [Homo sapiens] 2 1 12 9 At3g05140 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 12 10 At3g05300 cytidine/deoxycytidylate deaminase family protein similar to SP|O34598 Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {Bacillus subtilis}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 2 1 12 11 At3g05360 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to elicitor-inducible LRR receptor-like protein EILP [Nicotiana tabacum] gi|6635236|dbj|BAA88636; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 2 1 12 12 At3g05520 F-actin capping protein alpha subunit family protein contains Pfam profile: PF01267 F-actin capping protein alpha subunit 2 1 12 13 At3g05560 60S ribosomal protein L22-2 (RPL22B) identical to 60S ribosomal protein L22-2 SP:Q9M9W1 from [Arabidopsis thaliana] 2 1 12 14 At3g08010 expressed protein 2 1 12 15 At3g08490 hypothetical protein 2 1 12 16 At3g08650 "metal transporter family protein contains ZIP Zinc transporter domain, Pfam:PF02535" 2 1 12 17 At3g08710 "thioredoxin family protein similar to thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090 {Nicotiana tabacum}; contains Pfam profile: PF00085 Thioredoxin" 2 1 12 18 At3g08890 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 12 19 At3g08930 LMBR1 integral membrane family protein contains 5 transmembrane domains; contains Pfam PF04791: LMBR1-like conserved region; similar to unknown protein GB:BAA83351 [Oryza sativa] 2 1 12 20 At3g09050 expressed protein 2 1 12 21 At3g09100 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF00782: Dual specificity phosphatase catalytic domain" 2 1 12 22 At3g11580 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857 and RAV2 GI:3868859, AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile PF02362: B3 DNA binding domain" 2 1 12 23 At3g11630 "2-cys peroxiredoxin, chloroplast (BAS1) identical to SP|Q96291 2-cys peroxiredoxin BAS1, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 2 1 12 24 At3g11800 expressed protein 2 1 12 25 At3g11840 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 2 1 13 1 At3g11950 UbiA prenyltransferase family protein contains Pfam profile PF01040: UbiA prenyltransferase family 2 1 13 2 At3g12000 "S-locus related protein SLR1, putative (S1) identical to S-locus related protein SLR1 homolog (AtS1) GI:246209 Arabidopsis thaliana]; contains Pfam profiles PF01453: Lectin (probable mannose binding), PF00954: S-locus glycoprotein family" 2 1 13 3 At3g12145 "polygalacturonase inhibitor, putative / leucine-rich repeat protein (FLR1) similar to Swiss-Prot:Q05091 polygalacturonase inhibitor precursor (Polygalacturonase-inhibiting protein) [Pyrus communis]; identical to leucine-rich repeat protein FLR1 (FLR1) cDNA NCBI_gi:7637422; contains Pfam domain PF00560 Leucine Rich Repeat" 2 1 13 4 At3g12200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 1 13 5 At3g14610 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 2 1 13 6 At3g14670 hypothetical protein 2 1 13 7 At3g14840 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; contains 2 predicted transmembrane domains 2 1 13 8 At3g14860 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 2 1 13 9 At3g15010 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 1 13 10 At3g15030 "TCP family transcription factor, putative similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]" 2 1 13 11 At3g15200 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 13 12 At3g15260 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GB:AAD17805 from [Lotus japonicus]" 2 1 13 13 At3g17830 "DNAJ heat shock family protein similar to SP|P35514 Chaperone protein dnaJ {Lactococcus lactis}; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats)" 2 1 13 14 At3g17890 expressed protein 2 1 13 15 At3g18080 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase BGQ60 precursor GB:A57512 [Hordeum vulgare]; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 2 1 13 16 At3g18140 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe] 2 1 13 17 At3g18280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to TED4 [Zinnia elegans] GI:493721; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 13 18 At3g18330 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 1 13 19 At3g18485 hypothetical protein 2 1 13 20 At3g18530 expressed protein similar to unknown protein GB:AAF24615 from [Arabidopsis thaliana] 2 1 13 21 At3g21220 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK5) identical to GB:BAA28831 from [Arabidopsis thaliana]; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 2 1 13 22 At3g21270 "Dof-type zinc finger domain-containing protein (ADOF2) identical to Dof zinc finger protein ADOF2 GI:3608263 from [Arabidopsis thaliana]; identical to cDNA adof2 mRNA for Dof zinc finger protein GI:3608262; contains Pfam profile PF02701: Dof domain, zinc finger" 2 1 13 23 At3g21450 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 1 13 24 At3g21510 two-component phosphorelay mediator 3 (HP3) identical to ATHP3 [Arabidopsis thaliana] GI:4156245 2 1 13 25 At3g21650 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 2 1 14 1 At3g21700 expressed protein 2 1 14 2 At3g21840 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At7), putative E3 ubiquitin ligase; similar to Skp1 homolog GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 2 1 14 3 At3g21890 zinc finger (B-box type) family protein contains Pfam profile: PF01760 CONSTANS family zinc finger 2 1 14 4 At3g24600 hypothetical protein 2 1 14 5 At3g24660 "leucine-rich repeat transmembrane protein kinase, putative identical to putative kinase-like protein TMKL1 precursor GB:P33543 from [Arabidopsis thaliana], (Plant Mol. Biol. 23 (2), 415-421 (1993))" 2 1 14 6 At3g24830 60S ribosomal protein L13A (RPL13aB) similar to 60S RIBOSOMAL PROTEIN L13A GB:P35427 from [Rattus norvegicus] 2 1 14 7 At3g24890 "synaptobrevin-related similar to SYNAPTOBREVIN-RELATED PROTEIN GB:P47192 from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. (1992) 89(9), 3894-3898); contains Pfam profile PF00957: synaptobrevin" 2 1 14 8 At3g25150 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); similar to ras-GTPase-activating protein (GAP<120>) SH3-domain-binding protein 2 GB:NP_035946 [Mus musculus]" 2 1 14 9 At3g25180 cytochrome P450 family protein similar to cytochrome P450 monooxygenase GB:AAC49188 [Pisum sativum]; contains Pfam profile: PF00067 cytochrome P450 2 1 14 10 At3g25470 "bacterial hemolysin-related similar to hemolysine GB:AAD36643 from [Thermotoga maritima], contains Pfam profile: PF01479 S4 domain" 2 1 14 11 At3g25530 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein low similarity to SP|P23523 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) {Escherichia coli}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase; supporting cDNA gi|15375067|gb|AY044183.1| 2 1 14 12 At3g28140 calmodulin-binding protein 2 1 14 13 At3g28180 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 1 14 14 At3g28360 ABC transporter family protein similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare] 2 1 14 15 At3g28420 expressed protein 2 1 14 16 At3g28600 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 1 14 17 At3g28660 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 14 18 At3g28840 expressed protein 2 1 14 19 At3g28890 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 2 1 14 20 At3g42670 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 2 1 14 21 At3g42725 expressed protein 2 1 14 22 At3g42920 "hypothetical protein predicted proteins, Arabidopsis thaliana" 2 1 14 23 At3g42990 hypothetical protein 2 1 14 24 At3g43280 "hypothetical protein predicted protein, Arabidopsis thaliana" 2 1 14 25 At3g43350 "helicase-related low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 2 1 15 1 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 2 1 15 2 At3g43583 hypothetical protein 2 1 15 3 At3g46550 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan protein FLA8 [Arabidopsis thaliana] gi|10880493|gb|AAG24276 2 1 15 4 At3g46610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 15 5 At3g46790 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 15 6 At3g46850 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo]; 2 1 15 7 At3g47030 F-box family protein contains F-box domain Pfam:PF00646 2 1 15 8 At3g47090 "leucine-rich repeat transmembrane protein kinase, putative receptor kinase-like protein (Xa21), Oryza longistaminata, U72725" 2 1 15 9 At3g47250 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 1 15 10 At3g47320 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 2 1 15 11 At3g50100 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 1 15 12 At3g50160 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 2 1 15 13 At3g50330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 15 14 At3g50376 hypothetical protein 2 1 15 15 At3g50550 expressed protein isoform contains a non-consensus AT donor site at intron 1 2 1 15 16 At3g50610 hypothetical protein 2 1 15 17 At3g50780 expressed protein 2 1 15 18 At3g50840 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 1 15 19 At3g53440 expressed protein 2 1 15 20 At3g53470 "expressed protein ribosomal protein S25, cytosolic, Arabidopsis thaliana, PIR:T08568" 2 1 15 21 At3g53610 "Ras-related GTP-binding protein, putative similar to Ras-related protein ARA-3 SP:P28186 from [Arabidopsis thaliana]" 2 1 15 22 At3g53670 expressed protein 2 1 15 23 At3g53810 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 1 15 24 At3g53870 "40S ribosomal protein S3 (RPS3B) ribosomal protein S3a - Xenopus laevis, PIR:R3XL3A" 2 1 15 25 At3g53990 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 2 1 16 1 At3g54030 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 16 2 At3g56810 expressed protein 2 1 16 3 At3g56860 UBP1 interacting protein 2a (UBA2a) identical to UBP1 interacting protein 2a [Arabidopsis thaliana] GI:19682816; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 1 16 4 At3g57040 two-component responsive regulator / response reactor 4 (RR4) identical to responce reactor4 GI:3273202 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 1 16 5 At3g57100 hypothetical protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana]; contains Pfam PF05055 : Protein of unknown function (DUF677); contains Prosite PS00453: FKBP-type peptidyl-prolyl cis-trans isomerase signature 1; contains one transmembrane domain 2 1 16 6 At3g57280 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 2 1 16 7 At3g57340 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 2 1 16 8 At3g57480 "zinc finger (C2H2 type, AN1-like) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type; contains Pfam domain, PF01428: AN1-like Zinc finger" 2 1 16 9 At3g57530 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247" 2 1 16 10 At3g60300 RWD domain-containing protein contains weak similarity to RING finger protein 25 (RING finger protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus] 2 1 16 11 At3g60350 "armadillo/beta-catenin repeat family protein / F-box family protein contains Pfam profiles PF00514: Armadillo/beta-catenin-like repeat, PF00646: F-box domain; similar to F-box protein FBL2 (GI:6010699) [Rattus norvegicus]" 2 1 16 12 At3g60520 expressed protein 2 1 16 13 At3g60560 hypothetical protein 04.05.01.01 2 1 16 14 At3g60740 tubulin folding cofactor D identical to tubulin folding cofactor D GI:20514263 from [Arabidopsis thaliana] 2 1 16 15 At3g60800 zinc finger (DHHC type) family protein contains DHHC zinc finger domain PF01529 2 1 16 16 At3g60960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 16 17 At3g61040 "cytochrome P450 family protein similar to cytochrome P450 monooxygenase - Arabidopsis thaliana, EMBL:D78600" 2 1 16 18 At4g00165 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 16 19 At4g00220 LOB domain protein 30 / lateral organ boundaries domain protein 30 (LBD30) identical to LOB DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported by full-length cDNA gi:16660631 2 1 16 20 At4g00335 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 1 16 21 At4g00355 expressed protein 2 1 16 22 At4g00490 "beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative similar to beta-amylase from SP:O64407 [Vigna unguiculata]; contains Pfam profile PF01373: Glycosyl hydrolase family 14" 2 1 16 23 At4g00540 myb family transcription factor 2 1 16 24 At4g00660 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicases" 2 1 16 25 At4g00695 hypothetical protein 2 1 17 1 At4g03175 protein kinase family protein contains similarity to Swiss-Prot:P51566 protein kinase AFC1 [Arabidopsis thaliana] 2 1 17 2 At4g03210 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative contains similarity to xyloglucan endo-transglycosylase-like protein (XET-1) GI:5070246 from [Medicago truncatula]" 2 1 17 3 At4g03360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 1 17 4 At4g03410 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:P42925 22 kDa peroxisomal membrane protein [Mus musculus] 2 1 17 5 At4g03560 two-pore calcium channel (TPC1) identical to two-pore calcium channel (TPC1) [Arabidopsis thaliana] gi|14041819|dbj|BAB55460 2 1 17 6 At4g03610 phosphonate metabolism protein-related weak similarity to PhnP protein. (Swiss-Prot:P16692) [Escherichia coli] 2 1 17 7 At4g03965 hypothetical protein 2 1 17 8 At4g04010 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g32840, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 2 1 17 9 At4g08770 "peroxidase, putative identical to class III peroxidase ATP38 [Arabidopsis thaliana] gi|17530568|gb|AAL40851; similar to peroxidase C2 precursor [Armoracia rusticana] SWISS-PROT: P17179; identical to cDNA class III peroxidase ATP38 GI:17530567" 2 1 17 10 At4g08840 pumilio/Puf RNA-binding domain-containing protein contains similarity to RNA binding protein PufA [Dictyostelium discoideum] gi|5106561|gb|AAD39751 2 1 17 11 At4g08980 F-box family protein (FBW2) contains similarity to N7 protein GI:3273101 from [Medicago truncatula] 2 1 17 12 At4g09040 "RNA recognition motif (RRM)-containing protein low similarity to enhancer binding protein-1; EBP1 [Entamoeba histolytica] GI:8163877, SP|P19682 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) {Nicotiana sylvestris}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 1 17 13 At4g09250 SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 2 1 17 14 At4g09320 nucleoside diphosphate kinase 1 (NDK1) identical to identical to Nucleoside diphosphate kinase I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207) [Arabidopsis thaliana]; contains Pfam PF00334 : Nucleoside diphosphate kinase domain; 2 1 17 15 At4g09510 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 2 1 17 16 At4g09570 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 2 1 17 17 At4g12330 cytochrome P450 family protein contains Pfam profile:PF00067 cytochrome p450 2 1 17 18 At4g12390 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 1 17 19 At4g12545 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains protease inhibitor/seed storage/LTP family domain, Pfam:PF00234" 2 1 17 20 At4g12600 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 2 1 17 21 At4g12780 auxilin-related low similarity to SP|Q27974 Auxilin {Bos taurus} 2 1 17 22 At4g12830 "hydrolase, alpha/beta fold family protein low similarity to haloalkane dehalogenase from [Mycobacterium avium subsp. avium] GI:14422311, [Pseudomonas pavonaceae] GI:6689030; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 1 17 23 At4g13010 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430]; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 2 1 17 24 At4g13070 group II intron splicing factor CRS1-related contains weak similarity to CRS1 [Zea mays] gi|9837550|gb|AAG00595 2 1 17 25 At4g15430 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 2 1 18 1 At4g15480 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 1 18 2 At4g15650 protein kinase-related contains weak similarity to protein kinase [Dictyostelium discoideum] gi|551446|emb|CAA86053 2 1 18 3 At4g15710 hypothetical protein 2 1 18 4 At4g15840 expressed protein 2 1 18 5 At4g15900 "PP1/PP2A phosphatases pleiotropic regulator 1 (PRL1) identical to PP1/PP2A phosphatases pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis thaliana], PRL1 [Arabidopsis thaliana] GI:577733; contains Pfam PF00400: WD domain, G-beta repeat (7 copies)" 2 1 18 6 At4g16060 expressed protein 2 1 18 7 At4g16110 two-component responsive regulator family protein / response regulator family protein similar to ARR2 protein GI:4210451 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 1 18 8 At4g18580 expressed protein 2 1 18 9 At4g18600 expressed protein 2 1 18 10 At4g18760 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 2 1 18 11 At4g18820 expressed protein 2 1 18 12 At4g18980 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 2 1 18 13 At4g19006 "26S proteasome regulatory subunit, putative (RPN9) similar to 26S proteasome subunit p40.5 [Homo sapiens] gi|3618343|dbj|BAA33214" 2 1 18 14 At4g19150 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 2 1 18 15 At4g19190 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 1 18 16 At4g22050 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 2 1 18 17 At4g22110 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon esculentum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 2 1 18 18 At4g22230 expressed protein 2 1 18 19 At4g22260 "alternative oxidase, putative / immutans protein (IM) identical to IMMUTANS from Arabidopsis thaliana [gi:4138855]; contains Pfam profile PF01786 alternative oxidase" 2 1 18 20 At4g22400 expressed protein 2 1 18 21 At4g22460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 2 1 18 22 At4g22650 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 2 1 18 23 At4g22710 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome p450 2 1 18 24 At4g25270 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 18 25 At4g25315 Expressed protein 2 1 19 1 At4g25450 ABC transporter family protein similar to multidrug resistance protein 2 SP:P21440 from [Mus musculus] 2 1 19 2 At4g25510 hypothetical protein 2 1 19 3 At4g25680 expressed protein 2 1 19 4 At4g25720 glutamine cyclotransferase family protein contains Pfam profile: PF05096 glutamine cyclotransferase 2 1 19 5 At4g25890 "60S acidic ribosomal protein P3 (RPP3A) acidic ribosomal protein P3a - maize, PIR2:T02037" 2 1 19 6 At4g25950 "vacuolar ATP synthase, putative / V-ATPase, putative / vacuolar proton pump, putative similar to Swiss-Prot:O82629 vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2, Vacuolar proton pump G subunit 2) [Arabidopsis thaliana]" 2 1 19 7 At4g28460 hypothetical protein 2 1 19 8 At4g28510 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 1 19 9 At4g28670 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 2 1 19 10 At4g28706 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 1 19 11 At4g28870 hypothetical protein 2 1 19 12 At4g28940 nucleosidase-related contains weak similarity to MTA/SAH nucleosidase (P46). (Swiss-Prot:P24247) [Shigella flexneri] 2 1 19 13 At4g29110 hypothetical protein 2 1 19 14 At4g29160 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 2 1 19 15 At4g31720 transcription initiation factor IID (TFIID) 23-30kDa subunit (TAF2H) family protein contains Pfam profile: PF03540 transcription initiation factor TFIID 23-30kDa 2 1 19 16 At4g31780 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative similar to MGD synthase type A from Arabidopsis thaliana [gi:9927297], similar to monogalactosyldiacylglycerol synthase, Cucumis sativus, PID:g1805254" 2 1 19 17 At4g31890 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 2 1 19 18 At4g31950 "cytochrome P450 family protein cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153" 2 1 19 19 At4g32090 hypothetical protein 2 1 19 20 At4g32140 expressed protein 2 1 19 21 At4g32320 peroxidase family protein similar to L-ascorbate peroxidase [Arabidopsis thaliana] gi|1523789|emb|CAA66925; contains Pfam profile PF00141: Peroxidase 2 1 19 22 At4g32375 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains Pfam profile PF00295: Polygalacturonase (pectinase) 2 1 19 23 AT5G57480 PC-1 A11 2 1 19 24 3XSSC PC-1 A23 2 1 19 25 AT1G29930 PC-1 E11 2 1 20 1 3XSSC PC-1 E23 2 1 20 2 AT3G44150 PC-1 I11 2 1 20 3 3XSSC PC-1 I23 2 1 20 4 AT4G00810 PC-1 M11 2 1 20 5 3XSSC PC-1 M23 2 1 20 6 At4g34920 1-phosphatidylinositol phosphodiesterase-related contains weak similarity to 1-phosphatidylinositol phosphodiesterase precursor (EC 3.1.4.10) (Phosphatidylinositol-specific phospholipase C) (PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes] 2 1 20 7 At4g34980 "subtilase family protein similar to SBT1, a subtilase from tomato plants GI:1771160 from [Lycopersicon esculentum]" 2 1 20 8 At4g35130 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 20 9 At4g35180 amino acid transporter family protein similar to amino acid permease 1 GI:976402 from [Nicotiana sylvestris]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 2 1 20 10 At4g35335 "nucleotide-sugar transporter family protein similar to SP|O77592 UDP N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter) {Canis familiaris}, SP|P78382 CMP-sialic acid transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter" 2 1 20 11 At4g35380 guanine nucleotide exchange family protein similar to guanine nucleotide exchange factor [Homo sapiens] GI:5456754; contains Pfam profile PF01369: Sec7 domain 2 1 20 12 At4g35520 "DNA mismatch repair family protein similar to SP|Q9UHC1 DNA mismatch repair protein Mlh3 (MutL protein homolog 3) {Homo sapiens}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF01119: DNA mismatch repair protein, C-terminal domain" 2 1 20 13 At4g35580 no apical meristem (NAM) family protein similar to TIP [Arabidopsis thaliana] GI:9408601; contains Pfam profile PF02365: No apical meristem (NAM) protein 2 1 20 14 At4g38225 expressed protein 2 1 20 15 At4g38250 amino acid transporter family protein low similarity to lysosomal amino acid transporter 1 [Rattus norvegicus] GI:14571904; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 2 1 20 16 At4g38430 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 2 1 20 17 At4g38495 expressed protein 2 1 20 18 At4g38660 "thaumatin, putative similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406, thaumatin-like protein precursor [Pyrus pyrifolia] GI:3241854; contains Pfam profile PF00314: Thaumatin family" 2 1 20 19 At4g38730 expressed protein 2 1 20 20 At4g38900 "bZIP protein vsf-1 protein, Lycopersicon esculentum, PIR2:S52203" 2 1 20 21 At4g38930 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 2 1 20 22 At5g02350 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 20 23 At5g02410 DIE2/ALG10 family contains Pfam PF04922: DIE2/ALG10 family 2 1 20 24 At5g02560 "histone H2A, putative similar to histone H2A from Pisum sativum SP|P25470, Zea mays SP|P40280, Petroselinum crispum SP|P19177; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 1 20 25 At5g02600 "heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana" 2 1 21 1 At5g02740 expressed protein 2 1 21 2 At5g02800 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 21 3 At5g02960 "40S ribosomal protein S23 (RPS23B) ribosomal protein S23, Fragaria x ananassa, PIR:S56673" 2 1 21 4 At5g03020 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 2 1 21 5 At5g05700 arginine-tRNA-protein transferase 1 / arginyltransferase 1 / arginyl-tRNA-protein transferase 1 (ATE1) identical to SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC 2.3.2.8) (R-transferase 1) (Arginyltransferase 1) (Arginyl-tRNA--protein transferase 1) {Arabidopsis thaliana} 2 1 21 6 At5g05740 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains Pfam PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 2 1 21 7 At5g05920 deoxyhypusine synthase almost identical to deoxyhypusine synthase GI:15431345 from [Arabidopsis thaliana] 2 1 21 8 At5g05960 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 21 9 At5g06110 "DNAJ heat shock N-terminal domain-containing protein / cell division protein-related similar to GlsA [Volvox carteri f. nagariensis] GI:4633129; contains Pfam profiles PF00226 DnaJ domain, PF00249 Myb-like DNA-binding domain" 2 1 21 10 At5g06150 cyclin 1b (CYC1b) identical to cyclin [Arabidopsis thaliana] GI:1360646 2 1 21 11 At5g06280 expressed protein similar to unknown protein (pir||T08447) 2 1 21 12 At5g06340 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus angustifolius] GI:1888557, [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 2 1 21 13 At5g09420 "chloroplast outer membrane translocon subunit, putative similar to component of chloroplast outer membrane translocon Toc64 [Pisum sativum] GI:7453538; contains Pfam profiles PF01425: Amidase, PF00515: TPR Domain" 2 1 21 14 At5g09480 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family members At5g09530, At5g09520, At1g44222 [Arabidopsis thaliana]" 2 1 21 15 At5g09660 "malate dehydrogenase, glyoxysomal identical to SP|Q9ZP05; identical to cDNA microbody NAD-dependent malate dehydrogenase GI:3929650" 2 1 21 16 At5g09710 magnesium transporter CorA-like family protein contains Pfam profile PF01544: CorA-like Mg2+ transporter protein 2 1 21 17 At5g09890 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 2 1 21 18 At5g09930 ABC transporter family protein 2 1 21 19 At5g10070 "RNase L inhibitor protein-related contains Pfam profiles PF04034: Domain of unknown function (DUF367), PF04068: Possible metal-binding domain in RNase L inhibitor, RLI" 2 1 21 20 At5g10120 ethylene insensitive 3 family protein contains Pfam profile: PF04873 ethylene insensitive 3 2 1 21 21 At5g13260 expressed protein 2 1 21 22 At5g13300 ARF GTPase-activating domain-containing protein similar to GCN4-complementing protein (GCP1) GI:6465806 from [Arabidopsis thaliana] 2 1 21 23 At5g13480 "WD-40 repeat family protein similar to WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens}; contains 3 weak Pfam PF00400: WD domain, G-beta repeats;" 2 1 21 24 At5g13520 peptidase M1 family protein similar to SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4 hydrolase) {Homo sapiens}; contains Pfam profile PF01433: Peptidase family M1 2 1 21 25 At5g13670 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 1 22 1 At5g13730 "RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) identical to RNA polymerase sigma subunit SigD [Arabidopsis thaliana] GI:4972296, sigma-like factor [Arabidopsis thaliana] GI:3983260; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 2 1 22 2 At5g13890 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 1 22 3 At5g13950 expressed protein 2 1 22 4 At5g16710 "dehydroascorbate reductase, putative Strong similarity to dehydroascorbate reductase [Spinacia oleracea] gi:10952512 gb:AAG24945" 2 1 22 5 At5g16760 "inositol 1,3,4-trisphosphate 5/6-kinase identical to inositol 1,3,4-trisphosphate 5/6-kinase GI:3396079 from [Arabidopsis thaliana]" 2 1 22 6 At5g16890 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 1 22 7 At5g16950 expressed protein 2 1 22 8 At5g17120 hypothetical protein 2 1 22 9 At5g17180 hypothetical protein 2 1 22 10 At5g17330 glutamate decarboxylase 1 (GAD 1) sp|Q42521 2 1 22 11 At5g17390 universal stress protein (USP) family protein contains Pfam profile: PF00582 universal stress protein family 2 1 22 12 At5g19950 expressed protein 2 1 22 13 At5g20010 Ras-related GTP-binding nuclear protein (RAN-1) identical to GTP-binding nuclear protein RAN-1 SP:P41916 from [Arabidopsis thaliana] 2 1 22 14 At5g20160 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 2 1 22 15 At5g20190 expressed protein 2 1 22 16 At5g20380 transporter-related low similarity to vesicular glutamate transporter 3 [Rattus norvegicus] GI:21685382 2 1 22 17 At5g20440 mob1/phocein family protein contains Pfam profile: PF03637 mob1/phocein family 2 1 22 18 At5g20610 expressed protein 2 1 22 19 At5g20660 "24 kDa vacuolar protein, putative similar to 24 kDa vacuolar protein VP24 [Ipomoea batatas] gi|5821406|dbj|BAA83809" 2 1 22 20 At5g23960 terpene synthase/cyclase family protein non-consensus TA donor splice site at exon 4 2 1 22 21 At5g24020 septum site-determining protein (MIND) identical to MinD [Arabidopsis thaliana] GI:6759277; contains Pfam PF00991 : ParA family ATPase 2 1 22 22 At5g24170 expressed protein 2 1 22 23 At5g24230 expressed protein 2 1 22 24 At5g24340 3'-5' exonuclease domain-containing protein contains Pfam profile PF01612: 3'-5' exonuclease 2 1 22 25 At5g24390 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 2 1 23 1 At5g24570 expressed protein 2 1 23 2 At5g24610 expressed protein similar to unknown protein (emb|CAB62459.1) 2 1 23 3 At5g27550 "kinesin motor protein-related kinesin-like heavy chain - Arabidopsis thaliana, EMBL:AF080249" 2 1 23 4 At5g27606 hypothetical protein 2 1 23 5 At5g27780 auxin-responsive family protein similar to Auxin-induced protein 10A5 (SP:P33079) [Glycine max] 2 1 23 6 At5g27840 serine/threonine protein phosphatase PP1 isozyme 8 (TOPP8) identical to SP|O82734 Serine/threonine protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) {Arabidopsis thaliana} 2 1 23 7 At5g27990 "expressed protein predicted proteins, Saccharomyces cerevisiae and Schizosaccharomyces pombe" 2 1 23 8 At5g28050 cytidine/deoxycytidylate deaminase family protein similar to SP|O34598 Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {Bacillus subtilis}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 2 1 23 9 At5g28237 "tryptophan synthase, beta subunit, putative similar to SP|P14671 Tryptophan synthase beta chain 1, chloroplast precursor (EC 4.2.1.20) {Arabidopsis thaliana}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 2 1 23 10 At5g28300 "trihelix DNA-binding protein, putative similar to GT-2 factor [Arabidopsis thaliana GI:416490" 2 1 23 11 At5g36230 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein low similarity to SP|Q13144 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 2 1 23 12 At5g36290 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 2 1 23 13 At5g36850 "hypothetical protein similar to At1g27780, At2g05560, At4g05280, At3g24385, At3g42590, At2g12110, At2g12100" 2 1 23 14 At5g36905 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278; contains Pfam profile PF00075: RNase H 2 1 23 15 At5g37070 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 23 16 At5g37130 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 1 23 17 At5g37300 expressed protein 2 1 23 18 At5g37370 pre-mRNA splicing factor PRP38 family protein (SRL1) contains Pfam profile PF03371: PRP38 family 2 1 23 19 At5g40220 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL43 2 1 23 20 At5g40280 protein farnesyltransferase beta subunit (ERA1) identical to GI:8347240 [SWISS-PROT:Q38920]; WIGGUM mutant 2 1 23 21 At5g40460 expressed protein 2 1 23 22 At5g40520 expressed protein 2 1 23 23 At5g40645 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 2 1 23 24 At5g40700 "expressed protein predicted protein, Arabidopsis thaliana" 2 1 23 25 At5g40870 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family" 2 1 24 1 At5g40940 hypothetical protein 2 1 24 2 At5g43610 "sucrose transporter-related / sucrose-proton symporter-related similar to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094, sucrose transporter [Arabidopsis thaliana] GI:12057172; contains Pfam profile PF00083: major facilitator superfamily protein" 2 1 24 3 At5g43670 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 2 1 24 4 At5g43850 "acireductone dioxygenase (ARD/ARD') family protein similar to iron-deficiency induced gene [Hordeum vulgare] GI:14522834, SIPL [Homo sapiens] GI:16551383; contains Pfam profile PF03079: ARD/ARD' family" 2 1 24 5 At5g43910 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 1 24 6 At5g44040 expressed protein similar to unknown protein (gb|AAD10667.1) 2 1 24 7 At5g44100 "casein kinase, putative similar to dual specificity kinase 1 gi|1216484|gb|AAB47968" 2 1 24 8 At5g44270 hypothetical protein 2 1 24 9 At5g44310 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to 51 kDa seed maturation protein [Glycine max] GI:414977; contains Pfam profile PF02987: Late embryogenesis abundant protein 2 1 24 10 At5g46830 basic helix-loop-helix (bHLH) family protein 2 1 24 11 At5g46880 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 2 1 24 12 At5g47050 expressed protein 2 1 24 13 At5g47090 expressed protein 2 1 24 14 At5g47250 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 1 24 15 At5g47310 expressed protein 2 1 24 16 At5g47455 expressed protein 2 1 24 17 At5g47470 nodulin MtN21 family protein integral membrane protein domain (PF00892); similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 1 24 18 At5g50120 transducin family protein / WD-40 repeat family protein Similar to En/Spm-like transposon protein (gi:2739374)[Arabidopsis thaliana]; similar to GTP-binding regulatory protein and WD-repeat protein; contains 7 WD-40 repeats 2 1 24 19 At5g50180 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 2 1 24 20 At5g50335 expressed protein 2 1 24 21 At5g50380 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 1 24 22 At5g50560 expressed protein 2 1 24 23 At5g50610 hypothetical protein 2 1 24 24 At5g50820 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to unknown protein (pir||T07182) 2 1 24 25 At5g50860 protein kinase family protein contains PF00069: Protein kinase domain 2 1 25 1 At5g53590 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 2 1 25 2 At5g53660 expressed protein 2 1 25 3 At5g53840 F-box family protein (FBL13) contains F-box domain PF:00646 2 1 25 4 At5g53870 plastocyanin-like domain-containing protein contains similarity to SP|Q02917 Early nodulin 55-2 precursor {Glycine max}; PF02298: Plastocyanin-like domain 2 1 25 5 At5g54030 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 25 6 At5g54070 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 1 25 7 At5g54220 hypothetical protein 2 1 25 8 At5g54280 "myosin heavy chain, putative similar to myosin [Arabidopsis thaliana] gi|499045|emb|CAA84065" 2 1 25 9 At5g57000 expressed protein similar to unknown protein (gb|AAF21159.1) 2 1 25 10 At5g57040 lactoylglutathione lyase family protein / glyoxalase I family protein contains Pfam PF00903: glyoxalase family protein 2 1 25 11 At5g57170 macrophage migration inhibitory factor family protein / MIF family protein contains Pfam profile: PF01187 Macrophage migration inhibitory factor(MIF) 2 1 25 12 At5g57210 microtubule-associated protein-related contains some similarity to microtubule-associated protein GI:5032258 from [Arabidopsis thaliana]; contains Pfam profile PF00566: TBC domain 2 1 25 13 At5g57370 expressed protein low similarity to nucleic acid binding protein [Homo sapiens] GI:431953 2 1 25 14 At5g57440 haloacid dehalogenase-like hydrolase family protein similar to SP|Q08623 GS1 protein {Homo sapiens}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 1 25 15 At5g57600 expressed protein 2 1 25 16 At5g57650 eukaryotic translation initiation factor-related contains weak similarity to Swiss-Prot:Q38884 eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor interacting protein 1) (TRIP-1) [Arabidopsis thaliana] 2 1 25 17 At5g60190 "Ulp1 protease family protein low similarity to sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 1 25 18 At5g60230 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 2 1 25 19 At5g60400 expressed protein 2 1 25 20 At5g60430 expressed protein 2 1 25 21 At5g60590 yrdC protein-related 2 1 25 22 At5g60640 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 2 1 25 23 At5g60800 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 2 1 25 24 At5g60860 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303742 from [Pisum sativum]" 2 1 25 25 At5g63540 expressed protein ; expression supported by MPSS 2 1 26 1 At5g63595 "flavonol synthase, putative similar to SP|Q96330 Flavonol synthase 1 (EC 1.14.11.-) (FLS1) from Arabidopsis thaliana" 2 1 26 2 At5g63770 "diacylglycerol kinase, putative similar to diacylglycerol kinase, theta (diglyceride kinase, DGK- theta, DAG kinase theta). [Homo sapiens] SWISS-PROT:P52824" 2 1 26 3 At5g63830 zinc finger (HIT type) family protein contains Pfam profile: PF04438 HIT zinc finger 2 1 26 4 At5g63990 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 2 1 26 5 At5g64030 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 1 26 6 At5g64200 "arginine/serine-rich splicing factor SC35 contains similarity to splicing factor; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 1 26 7 At5g64240 latex-abundant family protein (AMC3) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 2 1 26 8 At5g66650 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 2 1 26 9 At5g66700 homeobox-leucine zipper family protein similar to Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (SP:Q02283) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain 2 1 26 10 At5g66850 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain; identical to cDNA MAP3K gamma protein kinase GI:2315152" 2 1 26 11 At5g66910 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 1 26 12 At5g67050 lipase class 3 family protein similar to lipase precursor [Rhizopus arrhizus] GI:6942320; contains Pfam profile PF01764: Lipase 2 1 26 13 At5g67110 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 26 14 At5g67260 "cyclin family protein similar to cyclin D3.1 protein [Nicotiana tabacum] GI:4160300; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 1 26 15 At5g67320 WD-40 repeat family protein strong similarity to unknown protein (ref|NP_005638.1) 2 1 26 16 At3g42670 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 2 1 26 17 At3g42725 expressed protein 2 1 26 18 At3g42920 "hypothetical protein predicted proteins, Arabidopsis thaliana" 2 1 26 19 At3g42990 hypothetical protein 2 1 26 20 At3g43280 "hypothetical protein predicted protein, Arabidopsis thaliana" 2 1 26 21 At3g43350 "helicase-related low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 2 1 26 22 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 2 1 26 23 At3g43583 hypothetical protein 2 1 26 24 Blank Blank 2 1 26 25 Blank Blank 2 2 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 2 2 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 2 1 5 atc07 Randomly generated negative control 2 2 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 2 2 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 1 8 atc03 Randomly generated negative control 2 2 1 9 At1g03470 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 2 2 1 10 At1g03540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 1 11 At1g03730 expressed protein similar to ESTs gb|AA605440 and gb|H37232 2 2 1 12 At1g03780 targeting protein-related similar to microtubule-associated protein / targeting protein for Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to Restricted expression proliferation associated protein 100 (p100) (Differentially expressed in lung cells 2) (DIL-2) (Targeting protein for Xklp2) (C20orf1 protein) (C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo sapiens} 2 2 1 13 At1g03910 expressed protein low similarity to cactin [Drosophila melanogaster] GI:7673675; expression supported by MPSS 2 2 1 14 At1g03960 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 2 2 1 15 At1g04130 "tetratricopeptide repeat (TPR)-containing protein contains non-consensus donor splice site AT at exon 4 and acceptor splice site at exon5; Contains similarity to serine/threonine protein phosphatase gb|X83099 from S. cerevisiae, SP|O95801 Tetratricopeptide repeat protein 4 Homo sapiens; contains Pfam profile PF00515: TPR Domain" 2 2 1 16 At1g04170 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene" 2 2 1 17 At1g06810 "hypothetical protein contains Pfam PF04396: Protein of unknown function, DUF537" 2 2 1 18 At1g06890 "transporter-related low similarity to SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter {Homo sapiens}, SP|Q95YI5 UDP-sugar transporter UST74c {Drosophila melanogaster}, SP|Q18779 UDP-sugar transporter sqv-7 {Caenorhabditis elegans}; contains 8 predicted transmembrane domains" 2 2 1 19 At1g07040 expressed protein 2 2 1 20 At1g07110 "fructose-6-phosphate 2-kinase / fructose-2,6-bisphosphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098" 2 2 1 21 At1g07280 expressed protein 2 2 1 22 At1g07320 "50S ribosomal protein L4, chloroplast (CL4) identical to SP:O50061 from [Arabidopsis thaliana]" 2 2 1 23 At1g07460 "legume lectin family protein contains Legume lectins beta-chain signature, PROSITE:PS00307" 2 2 1 24 At1g07480 transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) identical to transcription factor IIA large subunit GI:2826884 from [Arabidopsis thaliana] 2 2 1 25 At1g09970 "leucine-rich repeat transmembrane protein kinase, putative Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene isoform contains a TG acceptor site at intron." 2 2 2 1 At1g10020 expressed protein 2 2 2 2 At1g10180 expressed protein 2 2 2 3 At1g10240 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 2 2 4 At1g10400 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 2 5 At1g10460 germin-like protein (GLP7) identical to germin-like protein subfamily 1 member 1 [SP|P92998]; similar to ESTs gb|T88481 and gb|AI099566 2 2 2 6 At1g10590 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 2 2 2 7 At1g10650 expressed protein 2 2 2 8 At1g13310 expressed protein 2 2 2 9 At1g13370 "histone H3, putative strong similarity to Histone H3.2, minor Medicago sativa SP|P11105, histone H3 Rubus idaeus GI:10732809; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 2 2 10 At1g13540 expressed protein 2 2 2 11 At1g13590 phytosulfokines-related similar to SP|Q9AR88 Phytosulfokines 4 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] {Oryza sativa} 2 2 2 12 At1g13780 F-box family protein contains F-box domain Pfam:PF00646 2 2 2 13 At1g13860 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 2 2 14 At1g14020 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 2 2 2 15 At1g14110 xyloglucan fucosyltransferase family protein contains Pfam profile: PF03254 xyloglucan fucosyltransferase 2 2 2 16 At1g16705 p300/CBP acetyltransferase-related protein-related similar to p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] GI:12597461 2 2 2 17 At1g16760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 2 18 At1g16890 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 2 2 19 At1g16930 F-box family protein contains F-box domain Pfam:PF00646 2 2 2 20 At1g17120 amino acid permease family protein low similarity to SP|O43246 Cationic amino acid transporter-4 (CAT-4) {Homo sapiens}; contains Pfam profile PF00324: Amino acid permease 2 2 2 21 At1g17170 "glutathione S-transferase, putative One of three repeated putative glutathione transferases. 72% identical to glutathione transferase [Arabidopsis thaliana] (gi|4006934)" 2 2 2 22 At1g17345 auxin-responsive protein-related similar to GP:10185820 auxin-induced protein TGSAUR22 {Tulipa gesneriana} 2 2 2 23 At1g17400 hypothetical protein 2 2 2 24 At1g20290 hypothetical protein 2 2 2 25 At1g20350 "mitochondrial import inner membrane translocase subunit Tim17, putative similar to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17" 2 2 3 1 At1g20510 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to SP|P14912 and SP|P14913 from Petroselinum crispum; contains Pfam AMP-binding enzyme domain PF00501 2 2 3 2 At1g20570 tubulin family protein 2 2 3 3 At1g20710 homeobox-leucine zipper family protein similar to homeodomain protein PALE-2 (GI:20152544) [Arabidopsis thaliana]; contains Pfam profile: PF00046 homeobox domain 2 2 3 4 At1g20770 expressed protein 2 2 3 5 At1g20925 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 2 2 3 6 At1g20980 SPL1-Related2 protein (SPL1R2) strong similarity to SPL1-Related2 protein [Arabidopsis thaliana] GI:6006427; contains Pfam profile PF03110: SBP domain 2 2 3 7 At1g23670 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 2 2 3 8 At1g23710 expressed protein 2 2 3 9 At1g23860 "splicing factor RSZp21 (RSZP21) / 9G8-like SR protein (SRZ21) nearly identical to 9G8-like splicing factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21 protein [Arabidopsis thaliana] GI:2582643" 2 2 3 10 At1g23900 "gamma-adaptin, putative similar to SP|O43747 Adapter-related protein complex 1 gamma 1 subunit (Gamma-adaptin) (Clathrin assembly protein complex 1 gamma-1 large chain) {Homo sapiens}; contains Pfam profiles PF01602: Adaptin N terminal region, PF02883: Adaptin C-terminal domain" 2 2 3 11 At1g24050 expressed protein 2 2 3 12 At1g24120 "DNAJ heat shock protein, putative similar to Altered Response to Gravity [Arabidopsis thaliana] GI:4249662; contains Pfam profile PF00226 DnaJ domain" 2 2 3 13 At1g24265 expressed protein 2 2 3 14 At1g24300 GYF domain-containing protein contains Pfam profile: PF02213 GYF domain 2 2 3 15 At1g28030 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 2 3 16 At1g28090 polynucleotide adenylyltransferase family protein low similarity to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 2 2 3 17 At1g28210 "DNAJ heat shock protein, putative strong similarity to mitochondrial DnaJ protein (AtJ1) GI:564030 from [Arabidopsis thaliana]; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats); identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029" 2 2 3 18 At1g28260 expressed protein 2 2 3 19 At1g28390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 3 20 At1g28410 expressed protein 2 2 3 21 At1g28570 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 2 2 3 22 At1g28610 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif" 2 2 3 23 At1g31770 ABC transporter family protein contains Pfam profile: PF00005: ABC transporter 2 2 3 24 At1g31814 expressed protein 2 2 3 25 At1g31990 expressed protein 2 2 4 1 At1g32050 "secretory carrier membrane protein (SCAMP) family protein contains Pfam domain, PF04144: SCAMP family" 2 2 4 2 At1g32230 "WWE domain-containing protein / ceo protein, putative (CEO) contains Pfam domain, PF02825: WWE domain; identical to cDNA for ceo protein (ceo gene) GI:11044956" 2 2 4 3 At1g32280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 2 4 4 At1g32410 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 2 2 4 5 At1g32440 "pyruvate kinase, putative similar to pyruvate kinase isozyme G, chloroplast precursor [Nicotiana tabacum] SWISS-PROT:Q40546" 2 2 4 6 At1g36000 LOB domain family protein / lateral organ boundaries domain family protein (LBD5) identical to SP|Q9C8V8 Putative LOB domain protein 5 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 2 2 4 7 At1g36095 "hypothetical protein contains Pfam domain, PF04937: Protein of unknown function (DUF 659)" 2 2 4 8 At1g36550 hypothetical protein weak similarity to gag-pol polyprotein [Zea mays] GI:22296822 2 2 4 9 At1g36745 hypothetical protein 2 2 4 10 At1g37080 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 2 4 11 At1g38065 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator-related protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 2 2 4 12 At1g41770 hypothetical protein 2 2 4 13 At1g41870 hypothetical protein 2 2 4 14 At1g48230 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 2 2 4 15 At1g48290 expressed protein ; expression supported by MPSS 2 2 4 16 At1g48460 expressed protein 2 2 4 17 At1g48520 "glutamyl-tRNA(Gln) amidotransferase B family protein contains Pfam profiles: PF02934 PET112 family, N terminal region, PF02637 GatB/Yqey domain, PF01162 PET112 family, C terminal region" 2 2 4 18 At1g48650 "helicase domain-containing protein contains similarity to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, PF00035: Double-stranded RNA binding motif" 2 2 4 19 At1g48730 expressed protein 2 2 4 20 At1g48910 flavin-containing monooxygenase family protein / FMO family protein similar to flavin monoxygenase-like protein floozy [Petunia x hybrida] GI:15010541 2 2 4 21 At1g48970 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to guanine nucleotide exchange factor, eIF-2B, delta subunit [Mus musculus] GI:529428; contains Pfam profile PF01008: Initiation factor 2 subunit family" 2 2 4 22 At1g51950 auxin-responsive protein / indoleacetic acid-induced protein 18 (IAA18) identical to SP|O24408|AXII_ARATH Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) {Arabidopsis thaliana} 2 2 4 23 At1g51990 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase GI:5031492 from [Ocimum basilicum], [SP|Q00763] [Populus tremuloides]" 2 2 4 24 At1g52155 expressed protein 2 2 4 25 At1g52230 "photosystem I reaction center subunit VI, chloroplast, putative / PSI-H, putative (PSAH2) identical to SP|Q9SUI6; similar to PSI-H precursor [Nicotiana sylvestris] GI:407355; contains Pfam profile PF03244: Photosystem I reaction centre subunit VI" 2 2 5 1 At1g52390 hypothetical protein 2 2 5 2 At1g52420 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 2 2 5 3 At1g52570 phospholipase D alpha 2 / PLD alpha 2 (PLDALPHA2) (PLD2) / choline phosphatase 2 identical to phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from [Arabidopsis thaliana] 2 2 5 4 At1g52630 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 2 2 5 5 At1g55310 "SC35-like splicing factor, 33 kD (SCL33) nearly identical to SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana] GI:9843659" 2 2 5 6 At1g55350 "calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659" 2 2 5 7 At1g55500 expressed protein contains Pfam profile PF04146: YT521-B-like family 2 2 5 8 At1g55535 expressed protein 2 2 5 9 At1g55680 WD-40 repeat family protein contains 2 (1 significant) WD-40 repeats (PF0400); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces] 2 2 5 10 At1g55730 "cation exchanger, putative (CAX5) similar to low affinity calcium antiporter CAX2 [Arabidopsis thaliana] gi|1488267|gb|AAB05914; similar to H+/Ca2+ exchanger 2 [Ipomoea nil] gi|4512263|dbj|BAA75232; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 2 2 5 11 At1g55880 "pyridoxal-5'-phosphate-dependent enzyme, beta family protein similar to SP|P50867 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 2 2 5 12 At1g55930 "CBS domain-containing protein / transporter associated domain-containing protein contains Pfam profiles PF00571: CBS domain, PF03471: Transporter associated domain, PF01595: Domain of unknown function" 2 2 5 13 At1g60600 UbiA prenyltransferase family protein contains Pfam profile PF01040: UbiA prenyltransferase family 2 2 5 14 At1g60660 cytochrome b5 domain-containing protein contains InterPro accession IPR001199: Cytochrome b5 2 2 5 15 At1g60850 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514322; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 2 2 5 16 At1g60890 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 2 2 5 17 At1g61050 "alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162] ; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif" 2 2 5 18 At1g61095 expressed protein 2 2 5 19 At1g61255 expressed protein 2 2 5 20 At1g61310 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 5 21 At1g64065 expressed protein 2 2 5 22 At1g64110 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 2 2 5 23 At1g64295 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 2 5 24 At1g64350 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to nuclear pore protein SEH1 (SP:P53011) [Saccharomyces cerevisiae] 2 2 5 25 At1g64510 ribosomal protein S6 family protein similar to plastid ribosomal protein S6 precursor GB:AAF64311 GI:7582401 from [Spinacia oleracea] 2 2 6 1 At1g64570 expressed protein 2 2 6 2 At1g64750 DSS1/SEM1 family protein contains Pfam profile PF05160: DSS1/SEM1 family 2 2 6 3 At1g64790 translational activator family protein similar to HsGCN1 [Homo sapiens] GI:2282576 2 2 6 4 At1g67600 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 2 2 6 5 At1g67650 expressed protein 2 2 6 6 At1g67800 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 2 2 6 7 At1g67840 "ATP-binding region, ATPase-like domain-containing protein contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; similar to ESTs gb|AI995396.1, dbj|AV557393.1, and dbj|AV557055.1" 2 2 6 8 At1g67970 "heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) identical to heat shock transcription factor 5 (HSF5) SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam profile: PF00447 HSF-type DNA-binding domain" 2 2 6 9 At1g68010 glycerate dehydrogenase / NADH-dependent hydroxypyruvate reductase identical to hydroxypyruvate reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant Cell Physiol 1997 Apr;38(4):449-55) 2 2 6 10 At1g68170 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 2 6 11 At1g68220 expressed protein 2 2 6 12 At1g70880 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 2 2 6 13 At1g70940 "auxin transport protein, putative (PIN3) similar to auxin transport protein [Arabidopsis thaliana] gi|5817301|gb|AAD52695" 2 2 6 14 At1g71100 ribose 5-phosphate isomerase-related similar to ribose-5-phosphate isomerase GI:18654317 from [Spinacia oleracea] 2 2 6 15 At1g71160 "beta-ketoacyl-CoA synthase family protein similar to fatty acid elongase 3-ketoacyl-CoA synthase 1 GB:AAC99312, very-long-chain fatty acid condensing enzyme CUT1 [GI:5001734]" 2 2 6 16 At1g71310 expressed protein 2 2 6 17 At1g71370 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicase GB:6321111 from (S. cerevisiae)" 2 2 6 18 At1g71690 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 2 2 6 19 At1g71696 "carboxypeptidase D, putative similar to carboxypeptidase D [Anas platyrhynchos] gi|2789654|gb|AAB96915" 2 2 6 20 At1g74420 "xyloglucan fucosyltransferase, putative (FUT3) identical to SP|Q9CA71 Probable fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 2 2 6 21 At1g74470 "geranylgeranyl reductase identical to geranylgeranyl reductase GB:Y14044 [Arabidopsis thaliana] (involvement: chlorophyll, the tocopherol and the phylloquinone pathways Eur J Biochem 1998 Jan 15;251(1-2):413-7)" 2 2 6 22 At1g74650 myb family transcription factor (cY13) similar to myb protein cY13 GI:928930 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 myb DNA-binding domain; identical to cDNA cY13 gene GI:928929 2 2 6 23 At1g74710 isochorismate synthase 1 (ICS1) / isochorismate mutase identical to GI:17223087 and GB:AF078080; contains Pfam profile PF00425: chorismate binding enzyme; contains TIGRfam profile TIGR00543: isochorismate synthases; identical to cDNA isochorismate synthase 1 precursor (ICS1) nuclear gene for plastid product GI:17223086 2 2 6 24 At1g74890 two-component responsive regulator / response regulator 15 (ARR15) identical to response regulator 15 GI:11870065 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 2 6 25 At1g74940 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 2 2 7 1 At1g75110 expressed protein 2 2 7 2 At1g75170 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis] and to SEC14 cytosolic factor (SP:P53989) [Candida glabrata] 2 2 7 3 AT5G57480 PC-1 B11 2 2 7 4 3XSSC PC-1 B23 2 2 7 5 AT1G29930 PC-1 F11 2 2 7 6 3XSSC PC-1 F23 2 2 7 7 AT3G44150 PC-1 J11 2 2 7 8 3XSSC PC-1 J23 2 2 7 9 AT4G00810 PC-1 N11 2 2 7 10 3XSSC PC-1 N23 2 2 7 11 At1g77885 expressed protein 2 2 7 12 At1g77940 60S ribosomal protein L30 (RPL30B) similar to ribosomal protein L30 GI:388034 from [Homo sapiens] 2 2 7 13 At1g78110 expressed protein 2 2 7 14 At1g78170 expressed protein 2 2 7 15 At1g78320 "glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya]" 2 2 7 16 At1g78390 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris][GI:6715257]; similar to neoxanthin cleavage enzyme GI:9857290 from [Vigna unguiculata]" 2 2 7 17 At1g78570 "NAD-dependent epimerase/dehydratase family protein similar to dTDP-glucose 4,6-dehydratase from Aneurinibacillus thermoaerophilus GI:16357461, RmlB from Leptospira borgpetersenii GI:4234803; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 2 2 7 18 At1g78620 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 2 2 7 19 At2g01180 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 2 2 7 20 At2g01220 expressed protein 2 2 7 21 At2g01360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 7 22 At2g01420 "auxin transport protein, putative similar to auxin transport protein PIN7[Arabidopsis thaliana] gi|5817305|gb|AAD52697" 2 2 7 23 At2g01590 expressed protein 2 2 7 24 At2g01650 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 2 7 25 At2g01790 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 2 8 1 At2g01860 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 8 2 At2g05030 hypothetical protein 2 2 8 3 At2g05087 hypothetical protein 2 2 8 4 At2g05320 "beta-1,2-N-acetylglucosaminyltransferase II identical to beta-1,2-N-acetylglucosaminyltransferase II GI:10183645 from [Arabidopsis thaliana]" 2 2 8 5 At2g05400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein supported by tandem duplication of meprin and TRAF homology (MATH) domain protein (GI:4914358) (TIGR_Ath1:At2g05420) [Arabidopsis thaliana] 2 2 8 6 At2g05600 hypothetical protein 2 2 8 7 At2g05647 hypothetical protein similar to transposon-like proteins. 2 2 8 8 At2g05900 "SET domain-containing protein / YDG/SRA domain-containing protein contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain" 2 2 8 9 At2g05970 F-box family protein contains F-box domain Pfam:PF00646 2 2 8 10 At2g14080 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 8 11 At2g14120 dynamin-like protein 2b (ADL2b) identical to dynamin like protein 2b (ADL2b) [Arabidopsis thaliana] GI:19032339 2 2 8 12 At2g14455 hypothetical protein 2 2 8 13 At2g14540 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) 2 2 8 14 At2g14730 hypothetical protein 2 2 8 15 At2g14770 "Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 2 8 16 At2g14900 gibberellin-regulated family protein similar to SP|P46690 Gibberellin-regulated protein 4 precursor {Arabidopsis thaliana} GASA4; contains Pfam profile PF02704: Gibberellin regulated protein 2 2 8 17 At2g15000 expressed protein 2 2 8 18 At2g18030 peptide methionine sulfoxide reductase family protein similar to SP|P08761 Ecdysone-induced protein 28/29 kDa {Drosophila melanogaster}; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase 2 2 8 19 At2g18070 hypothetical protein 2 2 8 20 At2g18230 inorganic pyrophosphatase [soluble] (PPA) / pyrophosphate phospho-hydrolase / PPase nearly identical to SP|P21216 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Arabidopsis thaliana} 2 2 8 21 At2g18260 "syntaxin-related protein, putative (SYP112) similar to SP|Q42374 Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111) {Arabidopsis thaliana}" 2 2 8 22 At2g18440 expressed protein 2 2 8 23 At2g18470 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 8 24 At2g18660 expansin family protein (EXPR3) identical to Expansin-related protein 3 precursor (Ath-ExpGamma-1.2) (Swiss-Prot:Q9ZV52) [Arabidopsis thaliana]; contains Prosite PS00092: N-6 Adenine-specific DNA methylases signature; 2 2 8 25 At2g18720 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative " 2 2 9 1 At2g21380 kinesin motor protein-related 2 2 9 2 At2g21430 "cysteine proteinase A494, putative / thiol protease, putative identical to SP:P43295 Probable cysteine proteinase A494 precursor [Arabidopsis thaliana]; strong similarity to cysteine proteinase RD19A (thiol protease) GI:435618, SP:P43296 from [Arabidopsis thaliana]" 2 2 9 3 At2g21620 universal stress protein (USP) family protein / responsive to dessication protein (RD2) strong similarity to RD2 protein [Arabidopsis thaliana] GI:15320408; contains Pfam profile PF00582: universal stress protein family; identical to cDNA RD2 GI:15320407 2 2 9 4 At2g21655 expressed protein contains Pfam PF05617: Arabidopsis thaliana protein of unknown function (DUF784) 2 2 9 5 At2g21860 violaxanthin de-epoxidase-related contains weak similarity to violaxanthin de-epoxidase precursor gi|1438875|gb|AAC49373 2 2 9 6 At2g21900 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 9 7 At2g22070 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 9 8 At2g22122 expressed protein 2 2 9 9 At2g25000 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 9 10 At2g25090 CBL-interacting protein kinase 16 (CIPK16) identical to CBL-interacting protein kinase 16 [Arabidopsis thaliana] gi|14009298|gb|AAK50348 2 2 9 11 At2g25270 expressed protein 2 2 9 12 At2g25320 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 2 9 13 At2g25510 expressed protein 2 2 9 14 At2g25570 expressed protein 2 2 9 15 At2g25710 holocarboxylase synthetase 1 (HCS1) identical to holocarboxylase synthetase 1 (hcs1) [Arabidopsis thaliana] GI:19698365 2 2 9 16 At2g25760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 9 17 At2g28360 SIT4 phosphatase-associated family protein contains Pfam profile: PF04499 SIT4 phosphatase-associated protein 2 2 9 18 At2g28420 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 2 2 9 19 At2g28580 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 2 2 9 20 At2g28625 expressed protein 2 2 9 21 At2g28800 chloroplast membrane protein (ALBINO3) Oxa1p homolog {PMID:11148275}; identical to chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] GI:2209332 2 2 9 22 At2g28850 cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae} 2 2 9 23 At2g29060 scarecrow transcription factor family protein 2 2 9 24 At2g29100 "glutamate receptor family protein (GLR2.9) plant glutamate receptor family, PMID:11379626" 2 2 9 25 At2g31790 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 10 1 At2g31830 endonuclease/exonuclease/phosphatase family protein belongs to Pfam:PF03372: Endonuclease/Exonuclease/phosphatase family; contains 4 WD-40 repeats (PF00400);similar to SP:Q01968 Inositol polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's oculocerebrorenal syndrome protein) (SP:Q01968) [Homo sapiens] 2 2 10 2 At2g31990 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 10 3 At2g32040 integral membrane transporter family protein contains 9 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae] 2 2 10 4 At2g32210 expressed protein 2 2 10 5 At2g32250 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 2 10 6 At2g32400 "glutamate receptor family protein (GLR3.7) (GLR5) identical to Glr5 [Arabidopsis thaliana] gi|6644388|gb|AAF21042; plant glutamate receptor family, PMID:11379626" 2 2 10 7 At2g32460 myb family transcription factor (MYB101) identical to putative transcription factor MYB101 GI:18087348 from [Arabidopsis thaliana] 2 2 10 8 At2g35035 urease accessory family protein (URED) contains Pfam profile: PF01774 urease accessory protein UreD 2 2 10 9 At2g35080 expressed protein ; expression supported by MPSS 2 2 10 10 At2g35240 "plastid developmental protein DAG, putative similar to plastid protein [Arabidopsis thaliana] gi|2246378|emb|CAB06698" 2 2 10 11 At2g35300 "late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein contains Pfam domain, PF03760: Late embryogenesis abundant (LEA) group 1" 2 2 10 12 At2g35490 "plastid-lipid associated protein PAP, putative similar to plastid-lipid associated protein PAP3 [Brassica rapa] GI:14248552; contains Pfam profile PF04755: PAP_fibrillin" 2 2 10 13 At2g35530 bZIP transcription factor family protein contains Pfam domain PF00170: bZIP transcription factor; similar to G-Box binding protein 2 (GI:5381313) [Catharanthus roseus]. 2 2 10 14 At2g35660 "monooxygenase family protein nearly identical to CTF2A [GI:4164576][Plant Physiol. 119, 364 (1999), PGR99-008]" 2 2 10 15 At2g35710 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-2 from Homo sapiens [SP|O15488] 2 2 10 16 At2g38280 "AMP deaminase, putative / myoadenylate deaminase, putative similar to SP|P15274 AMP deaminase (EC 3.5.4.6) (Myoadenylate deaminase) {Saccharomyces cerevisiae}; contains Pfam profile PF00962: Adenosine/AMP deaminase" 2 2 10 17 At2g38340 "AP2 domain-containing transcription factor, putative (DRE2B) Similar to DREB2A (GP:3738230) and DREB2B (GP:3738232) [Arabidopsis thaliana]; DRE binding proteins may be involved in dehydration or low temp response" 2 2 10 18 At2g38500 expressed protein 2 2 10 19 At2g38570 expressed protein ; expression supported by MPSS 2 2 10 20 At2g38740 haloacid dehalogenase-like hydrolase family protein similar to SP|P71447 Beta-phosphoglucomutase (EC 5.4.2.6) {Lactococcus lactis}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 2 10 21 At2g38800 calmodulin-binding protein-related contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from [Solanum tuberosum] 2 2 10 22 At2g38890 expressed protein and genefinder 2 2 10 23 At2g38950 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 2 2 10 24 At2g41480 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781334|emb|CAA71494" 2 2 10 25 At2g41520 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 2 2 11 1 At2g41690 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 2 11 2 At2g41720 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 11 3 At2g41860 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247" 2 2 11 4 At2g41910 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 11 5 At2g42080 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI7 DnaJ homolog subfamily B member 8 (mDJ6) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 2 2 11 6 At2g42130 expressed protein contains weak hit to Pfam PF04755: PAP_fibrillin 2 2 11 7 At2g44735 expressed protein ; expression supported by MPSS 2 2 11 8 At2g44770 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 2 11 9 At2g44930 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 2 11 10 At2g44980 "transcription regulatory protein SNF2, putative similar to SNF2P [Oryza sativa (japonica cultivar-group)] GI:23193483; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; CG donor site annotated in one isoform based on protein alignments." 2 2 11 11 At2g45150 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 2 2 11 12 At2g45200 Golgi SNARE 12 protein / Golgi SNAP receptor complex member 1 identical to Probable 28 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 1) (SP:O22151) {Arabidopsis thaliana} 2 2 11 13 At2g45403 hypothetical protein 2 2 11 14 At2g45460 forkhead-associated domain-containing protein / FHA domain-containing protein 2 2 11 15 At2g48060 hypothetical protein 2 2 11 16 At2g48110 expressed protein 2 2 11 17 At3g01060 expressed protein 2 2 11 18 At3g01090 "Snf1-related protein kinase (KIN10) (SKIN10) identical to Snf1-related protein kinase, KIN10 SP:Q38997 from [Arabidopsis thaliana]" 2 2 11 19 At3g01250 expressed protein 2 2 11 20 At3g01310 "expressed protein similar to unknown protein GB:BAA24863 [Homo sapiens], unknown protein GB:BAA20831 [Homo sapiens], unknown protein GB:AAB42264 [Caenorhabditis elegans]" 2 2 11 21 At3g01435 Expressed protein 2 2 11 22 At3g01490 "protein kinase, putative similar to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 2 11 23 At3g04050 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 2 2 11 24 At3g04110 "glutamate receptor family protein (GLR1.1) (GLR1) identical to putative glutamate receptor (GLR1) GB:AF079998 [Arabidopsis thaliana]; plant glutamate receptor family, PMID:11379626" 2 2 11 25 At3g04280 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 2 2 12 1 At3g04340 "FtsH protease family protein similar to chloroplast FtsH protease [Arabidopsis thaliana] GI:1483215; contains Pfam profiles PF01434: Peptidase family M41, PF00004: ATPase AAA family" 2 2 12 2 At3g04500 RNA recognition motif (RRM)-containing protein similar to ssRNA-binding protein [Dictyostelium discoideum] GI:1546894; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 2 12 3 At3g04560 expressed protein 2 2 12 4 At3g04690 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 12 5 At3g04750 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 12 6 At3g07220 "transcriptional activator, putative similar to transcriptional activator FHA1 [Nicotiana tabacum] gi|15705932|gb|AAL05884" 2 2 12 7 At3g07290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535: PPR repeat 2 2 12 8 At3g07450 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to cysteine-rich 5B protein - Lycopersicon esculentum, PIR2:S39552 [GI:415833]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 2 12 9 At3g07490 "calcium-binding protein, putative similar to calcium-binding protein GI:6580549 from [Lotus japonicus]" 2 2 12 10 At3g07620 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 12 11 At3g07680 emp24/gp25L/p24 family protein similar to SP|Q15363 Cop-coated vesicle membrane protein p24 precursor (p24A) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 2 2 12 12 At3g07810 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 2 12 13 At3g07870 F-box family protein contains F-box domain Pfam:PF00646 2 2 12 14 At3g10840 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Terrabacter sp. DBF63] GI:14196240; contains Pfam profile: PF00561 alpha/beta hydrolase fold" 2 2 12 15 At3g10890 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872, (1-4)-beta-mannan endohydrolase GB:AAB87859 [Lycopersicon esculentum]; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 2 2 12 16 At3g10990 F-box family protein contains TIGRfam:TIGR01640 F-box protein interaction domain 2 2 12 17 At3g11050 "ferritin, putative similar to ferritin subunit cowpea2 precursor GI:2970654 (Vigna unguiculata); contains Pfam profile PF00210: Ferritin-like domain" 2 2 12 18 At3g11230 "yippee family protein similar to qdgl-1 [Coturnix coturnix] GI:10441650, Yippee protein [Homo sapiens] GI:5713281; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 2 2 12 19 At3g11280 myb family transcription factor contains Pfam profile: PF00249 Myb-like DNA-binding domain 2 2 12 20 At3g11420 fringe-related protein similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 12 21 At3g11470 4'-phosphopantetheinyl transferase family protein contains Pfam profile PF01648: 4'-phosphopantetheinyl transferase superfamily 2 2 12 22 At3g13845 expressed protein 2 2 12 23 At3g13890 myb family transcription factor (MYB26) similar to myb-related transcription factor GI:1167486 from [Lycopersicon esculentum]; contains myb DNA binding domain: PF0049 2 2 12 24 At3g14060 expressed protein 2 2 12 25 At3g14090 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 2 13 1 At3g14220 "GDSL-motif lipase/hydrolase family protein similar to myrosinase-associated proteins GI:1769968, GI:1769970 from [Brassica napus]; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family; contains 1 predicted transmembrane domain;" 2 2 13 2 At3g14240 subtilase family protein contains similarity to SBT1 GI:1771160 from [Lycopersicon esculentum] 2 2 13 3 At3g14400 ubiquitin-specific protease 25 (UBP25) similar to GI:11993490 2 2 13 4 At3g14450 "RNA-binding protein, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies)" 2 2 13 5 At3g17030 expressed protein 2 2 13 6 At3g17100 expressed protein 2 2 13 7 At3g17225 invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 2 13 8 At3g17250 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase-2C GB:AAC36698 from [Mesembryanthemum crystallinum] 2 2 13 9 At3g17430 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 2 2 13 10 At3g17480 F-box family protein contains F-box domain Pfam:PF00646 2 2 13 11 At3g17611 "rhomboid family protein / zinc finger protein-related contains Pfam profiles PF01694: Rhomboid family, PF00641: Zn-finger in Ran binding protein and others" 2 2 13 12 At3g17660 human Rev interacting-like family protein / hRIP family protein similar to ARF GAP-like zinc finger-containing protein ZIGA3 GI:10441352 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 2 2 13 13 At3g20320 mce-related family protein contains Pfam PF02470: mce related protein 2 2 13 14 At3g20362 hypothetical protein loosely supported by Brassica genome sequence alignments. 2 2 13 15 At3g20540 "DNA-directed DNA polymerase family protein similar to PolI-like DNA polymerase [Oryza sativa] GI:19912795; contains Pfam profiles PF01612: 3'-5' exonuclease, PF00476: DNA polymerase I family A" 2 2 13 16 At3g20590 "non-race specific disease resistance protein, putative similar to non-race specific disease resistance protein [Arabidopsis thaliana] NDR1 gi|2754816|gb|AAB95208" 2 2 13 17 At3g20770 ethylene-insensitive 3 (EIN3) identical to ethylene-insensitive3 GI:2224933 from [Arabidopsis thaliana] 2 2 13 18 At3g20810 transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain PF02373: jmjC domain 2 2 13 19 At3g20980 hypothetical protein 2 2 13 20 At3g21090 "ABC transporter family protein similar to ATP-binding cassette, sub-family G (WHITE), member 2 GB:NP_036050 from [Mus musculus]" 2 2 13 21 At3g23780 "DNA-directed RNA polymerase family protein similar to SP|P38420 DNA-directed RNA polymerase II 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 2) {Arabidopsis thaliana}; contains Pfam profiles PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF04566: RNA polymerase Rpb2 domain 4, PF04567: RNA polymerase Rpb2 domain 5" 2 2 13 22 At3g23830 "glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein 2, mitochondrial precursor (AtGRP2) (Swiss-Prot:Q9SVM8) [Arabidopsis thaliana]; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 2 13 23 At3g24000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 13 24 At3g24060 self-incompatibility protein-related low similarity to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 2 2 13 25 At3g24210 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 2 2 14 1 At3g24255 expressed protein 2 2 14 2 At3g24440 fibronectin type III domain-containing protein contains Pfam profile PF00041: Fibronectin type III domain 2 2 14 3 At3g24500 "ethylene-responsive transcriptional coactivator, putative similar to ethylene-responsive transcriptional coactivator [Lycopersicon esculentum] gi|5669634|gb|AAD46402" 2 2 14 4 At3g27230 expressed protein 2 2 14 5 At3g27280 "prohibitin, putative strong similarity to prohibitin [Arabidopsis thaliana] GI:1946331; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 2 14 6 At3g27430 "20S proteasome beta subunit B (PBB1) identical to 20S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type;" 2 2 14 7 At3g27480 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 2 14 8 At3g27660 glycine-rich protein / oleosin identical to oleosin isoform GB:S71286 from [Arabidopsis thaliana]; identical to cDNA oleosin (isoform Atol2) GI:987013 2 2 14 9 At3g27720 zinc finger protein-related contains Pfam:PF01485 IBR domain 2 2 14 10 At3g27920 trichome differentiation protein / GLABROUS1 protein (GL1) identical to trichome differentiation protein GL1 SP:P27900 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 Myb-like DNA-binding domain 2 2 14 11 At3g27970 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 2 14 12 At3g32100 hypothetical protein 2 2 14 13 At3g32180 hypothetical protein 2 2 14 14 At3g32940 expressed protein 2 2 14 15 At3g33131 hypothetical protein 2 2 14 16 At3g42140 hypothetical protein 2 2 14 17 At3g42180 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 14 18 At3g42440 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 2 2 14 19 At3g42510 hypothetical protein 2 2 14 20 At3g45610 Dof-type zinc finger domain-containing protein identical to dof6 zinc finger protein GI:5689615 from [Arabidopsis thaliana] 2 2 14 21 At3g45670 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 2 14 22 At3g45830 expressed protein 2 2 14 23 At3g45890 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 2 2 14 24 At3g46070 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 2 2 14 25 At3g46130 myb family transcription factor (MYB48) contains Pfam profile: PF00249 myb-like DNA-binding domain 2 2 15 1 At3g46320 histone H4 nearly identical to histone H4 [Arabidopsis thaliana] GI:166740 2 2 15 2 At3g46380 hypothetical protein 2 2 15 3 At3g49170 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 15 4 At3g49230 hypothetical protein 2 2 15 5 At3g49390 "RNA-binding protein, putative RNA-binding protein RBP37, Arabidopsis thaliana, PIR:T04196" 2 2 15 6 At3g49450 F-box family protein contains F-box domain Pfam:PF00646 2 2 15 7 At3g49630 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 2 2 15 8 At3g49690 myb family transcription factor contains PFAM profile: myb DNA binding domain PF00249 2 2 15 9 At3g49870 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor-like protein 1 (SP:P40616) [Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191 Arabidopsis thaliana; contains domain PF00025: ADP-ribosylation factor family" 2 2 15 10 At3g49930 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 2 2 15 11 At3g52640 nicastrin-related contains weak similarity to Nicastrin precursor (Swiss-Prot:Q92542) [Homo sapiens] 2 2 15 12 At3g52690 "hypothetical protein predicted proteins, Arabidopsis thaliana" 2 2 15 13 At3g52830 "hypothetical protein MobA, Pseudomonas alcaligenes, EMBL:PAU88088" 2 2 15 14 At3g52890 protein kinase (KIPK) identical to protein kinase KIPK (KCBP-interacting protein kinase) [Arabidopsis thaliana] gi|7716430|gb|AAF68383 2 2 15 15 At3g53030 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 2 15 16 At3g53090 "HECT-domain-containing protein / ubiquitin-transferase family protein / IQ calmodulin-binding motif-containing protein contains Pfam profiles PF00632: HECT-domain (ubiquitin-transferase), PF00612: IQ calmodulin-binding motif" 2 2 15 17 At3g53250 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana and auxin-induced protein 6B (SP:P33083) (PIR:T10942) [Glycine max] 2 2 15 18 At3g53300 "cytochrome P450 family protein CYTOCHROME P450 71B5, Arabidopsis thaliana, SWISSPROT:C7B5_ARATH" 2 2 15 19 At3g55880 expressed protein 2 2 15 20 At3g55940 "phosphoinositide-specific phospholipase C, putative similar to phosphoinositide specific phospholipase C GI:857374 from [Arabidopsis thaliana]" 2 2 15 21 At3g56120 Met-10+ like family protein non-consensus TT donor splice site at exon 4 ; contains Pfam profile PF02475: Met-10+ like-protein 2 2 15 22 At3g56160 expressed protein 2 2 15 23 At3g56340 40S ribosomal protein S26 (RPS26C) several 40S ribosomal protein S26 2 2 15 24 At3g56400 "WRKY family transcription factor DNA-binding protein 4 WRKY4 - Nicotiana tabacum, EMBL:AF193771" 2 2 15 25 At3g56580 "zinc finger (C3HC4-type RING finger) family protein contains INTERPRO domain, IPR001841, RING finger" 2 2 16 1 At3g56640 exocyst complex subunit Sec15-like family protein contains Pfam profile PF04091: Exocyst complex subunit Sec15-like 2 2 16 2 At3g59450 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 2 2 16 3 At3g59510 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 2 2 16 4 At3g59680 expressed protein 2 2 16 5 At3g59750 "receptor lectin kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733" 2 2 16 6 At3g59890 "dihydrodipicolinate reductase family protein weak similarity to SP|Q52419 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR) {Pseudomonas syringae}; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 2 2 16 7 At3g59950 autophagy 4b (APG4b) identical to autophagy 4b [Arabidopsis thaliana] gi|19912145|dbj|BAB88384 2 2 16 8 At3g60110 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 2 16 9 At3g60180 "uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP kinase) (Swiss-Prot:O04905) [Arabidopsis thaliana]" 2 2 16 10 At3g62880 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains PFam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 2 2 16 11 At3g62940 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 2 2 16 12 At3g63120 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 2 2 16 13 At3g63180 expressed protein 2 2 16 14 At3g63290 expressed protein 2 2 16 15 At3g63350 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 2 16 16 At3g63490 "ribosomal protein L1 family protein ribosomal protein L1, S.oleracea, EMBL:SORPL1" 2 2 16 17 At3g63530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 16 18 At4g02380 "late embryogenesis abundant 3 family protein / LEA3 family protein similar to several small proteins (~100 aa) that are induced by heat, auxin, ethylene and wounding such as Phaseolus aureus indole-3-acetic acid induced protein ARG (SW:32292); contains Pfam profile PF03242: Late embryogenesis abundant protein" 2 2 16 19 At4g02425 expressed protein 2 2 16 20 At4g02570 cullin family protein similar to cullin 3 [Homo sapiens] GI:3639052; contains Pfam profile PF00888: Cullin family 2 2 16 21 At4g02630 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 2 16 22 At4g02780 copalyl diphosphate synthase / CPS / ent-kaurene synthetase A (GA1) identical to GI:571330 [PMID: 7994182]; formerly called ent-kaurene synthetase A 2 2 16 23 At4g02840 "small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative similar to small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1, Sm-D1, Sm-D autoantigen) [Mouse] SWISS-PROT:P13641" 2 2 16 24 At4g03010 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0A [Lycopersicon esculentum] gi|3894385|gb|AAC78592" 2 2 16 25 At4g03070 2-oxoglutarate-dependent dioxygenase (AOP1.2) identical to GI:16118887; contains PF03171: 2OG-Fe(II) oxygenase superfamily domain 2 2 17 1 At4g07526 hypothetical protein 2 2 17 2 At4g07740 hypothetical protein 2 2 17 3 At4g08098 hypothetical protein 2 2 17 4 At4g08160 "glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain" 2 2 17 5 At4g08290 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 2 17 6 At4g08340 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 2 17 7 At4g08530 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 2 17 8 At4g08580 microfibrillar-associated protein-related similar to Microfibrillar-associated protein 1 (Associated microfibril protein) (AMF) (Swiss-Prot:P55080) [Gallus gallus] 2 2 17 9 At4g11400 "ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein / Myb-like DNA-binding domain-containing protein similar to BRG1-binding protein ELD/OSA1 [Homo sapiens] GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT DNA binding domain, PF01448: ELM2 domain, PF00249: Myb-like DNA-binding domain" 2 2 17 10 At4g11460 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 17 11 At4g11660 heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) identical to heat shock factor protein 7 (HSF7) SP:Q9T0D3 from [Arabidopsis thaliana] 2 2 17 12 At4g11720 hypothetical protein 2 2 17 13 At4g11880 MADS-box protein (AGL14) nearly identical to MADS-box protein AGL14 GI:862644 2 2 17 14 At4g11940 hypothetical protein predicted proteins Arabidopsis thaliana 2 2 17 15 At4g12080 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 2 2 17 16 At4g12140 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger proteins RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 2 2 17 17 At4g14700 "replication control protein, putative similar to origin recognition complex subunit 1 (Replication control protein 1) [Homo sapiens] SWISS-PROT:Q13415" 2 2 17 18 At4g14730 transmembrane protein-related low similarity to transmembrane protein OTMP [Ovis aries] GI:9965379 2 2 17 19 At4g14880 cysteine synthase / O-acetylserine (thiol)-lyase / O-acetylserine sulfhydrylase (OAS1) nearly identical to SP|P47998 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA O-acetylserine lyase (At.OAS.5-8) GI:6983573 2 2 17 20 At4g14920 "PHD finger transcription factor, putative " 2 2 17 21 At4g15056 hypothetical protein 2 2 17 22 At4g15093 catalytic LigB subunit of aromatic ring-opening dioxygenase family contains Pfam PF02900: Catalytic LigB subunit of aromatic ring-opening dioxygenase 2 2 17 23 At4g15240 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 17 24 At4g15300 cytochrome P450 family protein similar to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 2 2 17 25 At4g17760 expressed protein 2 2 18 1 At4g17810 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 2 18 2 At4g17990 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 2 2 18 3 At4g18020 pseudo-response regulator 2 (APRR2) (TOC2) identical to pseudo-response regulator 2 GI:7576356 from [Arabidopsis thaliana] 2 2 18 4 At4g18190 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 2 2 18 5 At4g18250 "receptor serine/threonine kinase, putative similar to to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208" 2 2 18 6 At4g18375 KH domain-containing protein contains similarity to RNA-binding KH-domains PF:00013 2 2 18 7 At4g18420 hypothetical protein 2 2 18 8 At4g21210 expressed protein contains Pfam domain PF03618: Domain of unknown function (DUF299) 2 2 18 9 At4g21240 F-box family protein contains F-box domain Pfam:PF00646 2 2 18 10 At4g21410 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 18 11 At4g21450 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 2 2 18 12 At4g21600 "bifunctional nuclease, putative similar to bifunctional nuclease [Zinnia elegans] gi|4099833|gb|AAD00694" 2 2 18 13 At4g21660 "proline-rich spliceosome-associated (PSP) family protein similar to SP|Q13435 Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) {Homo sapiens}; contains Pfam profiles PF04046: PSP, PF04037: Domain of unknown function (DUF382)" 2 2 18 14 At4g21840 "methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein weak similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 2 2 18 15 At4g21870 "26.5 kDa class P-related heat shock protein (HSP26.5-P) contains Pfam profile: PF00011 Hsp20/alpha crystallin family: identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 2 2 18 16 At4g24440 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) identical to transcription initiation factor IIA gamma chain SP:Q39236 from [Arabidopsis thaliana]; 2 2 18 17 At4g24470 "zinc finger (GATA type) protein ZIM (ZIM) identical to zinc-finger protein expressed in Inflorescence Meristem, ZIM gi:8918533 from [Arabidopsis thaliana]" 2 2 18 18 At4g24620 "glucose-6-phosphate isomerase, putative similar to glucose-6-phosphate isomerase [Spinacia oleracea] GI:3413511; contains Pfam profile PF00342: glucose-6-phosphate isomerase" 2 2 18 19 At4g24670 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 2 2 18 20 At4g24810 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 18 21 At4g24890 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 2 18 22 At4g25040 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 2 2 18 23 At4g25100 "superoxide dismutase [Fe], chloroplast (SODB) / iron superoxide dismutase (FSD1) identical to Fe-superoxide dismutase [Arabidopsis thaliana] gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935" 2 2 18 24 At4g27657 expressed protein 2 2 18 25 At4g27710 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 2 2 19 1 At4g27870 integral membrane family protein contains Pfam PF01988: Integral membrane protein 2 2 19 2 At4g27920 expressed protein various predicted proteins 2 2 19 3 At4g28070 AFG1-like ATPase family protein contains Pfam profile: PF03969 AFG1-like ATPase 2 2 19 4 At4g28110 myb family transcription factor (MYB41) contains PFAM profile: myb DNA binding protein PF00249 2 2 19 5 At4g28280 expressed protein 2 2 19 6 At4g28320 "glycosyl hydrolase family 5 protein / cellulase family protein mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) - tomato, PIR2:T04323" 2 2 19 7 At4g30940 potassium channel tetramerisation domain-containing protein contains Pfam profile PF02214: K+ channel tetramerisation domain 2 2 19 8 At4g30993 expressed protein 2 2 19 9 At4g31115 expressed protein supported by full length cDNA gi:21436034 from [Arabidopsis thaliana] 2 2 19 10 At4g31150 endonuclease V family protein contains Pfam PF04493: Endonuclease V 2 2 19 11 At4g31330 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 2 2 19 12 At4g31390 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 19 13 At4g31550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 19 14 At4g31580 "splicing factor RSZp22 (RSZP22) / 9G8-like SR protein (SRZ22) identical to RSZp22 protein [Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like SR protein [Arabidopsis thaliana] GI:3435094; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) and PF00098: Zinc knuckle; identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093" 2 2 19 15 At4g34100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 19 16 At4g34138 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 19 17 At4g34265 expressed protein 2 2 19 18 At4g34310 expressed protein 2 2 19 19 At4g34460 "guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994)" 2 2 19 20 At4g34520 fatty acid elongase 1 (FAE1) identical to fatty acid elongase 1 [GI:881615] 2 2 19 21 At4g34690 hypothetical protein 2 2 19 22 At4g34750 "auxin-responsive protein, putative / small auxin up RNA (SAUR_E) contains similarity to indole-3-acetic acid induced protein ARG7 SP:P32295 from [Phaseolus aureus]" 2 2 19 23 AT5G57480 PC-1 B11 2 2 19 24 3XSSC PC-1 B23 2 2 19 25 AT1G29930 PC-1 F11 2 2 20 1 3XSSC PC-1 F23 2 2 20 2 AT3G44150 PC-1 J11 2 2 20 3 3XSSC PC-1 J23 2 2 20 4 AT4G00810 PC-1 N11 2 2 20 5 3XSSC PC-1 N23 2 2 20 6 At4g37380 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 20 7 At4g37440 expressed protein 2 2 20 8 At4g37620 hypothetical protein 2 2 20 9 At4g37670 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 from Escherichia coli ; contains Pfam profile PF00696: Amino acid kinase family 2 2 20 10 At4g37830 "cytochrome c oxidase-related contains weak similarity to cytochrome c oxidase polypeptide VIa-liver, mitochondrial precursor (EC 1.9.3.1) (Swiss-Prot:P10818) [Rattus norvegicus]" 2 2 20 11 At4g37890 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 2 20 12 At4g38060 expressed protein 2 2 20 13 At4g38100 expressed protein 2 2 20 14 At5g01520 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 2 2 20 15 At5g01560 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 2 20 16 At5g01710 expressed protein 2 2 20 17 At5g01750 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 2 2 20 18 At5g01930 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 2 2 20 19 At5g01990 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 2 2 20 20 At5g02130 "expressed protein kinesin light chain - Plectonema boryanum, EMBL:U78597" 2 2 20 21 At5g02190 aspartyl protease family protein contains Pfam profile PF00026: Eukaryotic aspartyl protease 2 2 20 22 At5g04940 "SET domain-containing protein (SUVH1) contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH1 (SUVH1) GI:13517742" 2 2 20 23 At5g04990 sad1/unc-84 protein-related contains weak similarity to Sad1/unc-84 protein-like 1 (Swiss-Prot:O94901) [Homo sapiens] 2 2 20 24 At5g05140 "transcription elongation factor-related low similarity to transcription elongation factor TFIIS.h [Mus musculus] GI:3288547, elongin A [Mus musculus] GI:6009624" 2 2 20 25 At5g05200 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 21 1 At5g05350 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; expression supported by MPSS" 2 2 21 2 At5g05390 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 2 2 21 3 At5g05550 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 2 2 21 4 At5g05590 phosphoribosylanthranilate isomerase 2 (PAI2) identical to gi:619747 2 2 21 5 At5g08240 expressed protein 2 2 21 6 At5g08300 "succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative identical to SP|P53586 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) {Arabidopsis thaliana}; strong similarity to SP|P13086 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor {Rattus norvegicus}; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 2 2 21 7 At5g08440 expressed protein 2 2 21 8 At5g08480 VQ motif-containing protein contains PF05678: VQ motif 2 2 21 9 At5g08620 "DEAD box RNA helicase (RH25) identical to RNA helicase [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 2 2 21 10 At5g08680 "ATP synthase beta chain, mitochondrial, putative strong similarity to SP|P83483 ATP synthase beta chain 1, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}, SP|P17614 ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana plumbaginifolia}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain" 2 2 21 11 At5g09240 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 2 2 21 12 At5g09280 pectate lyase family protein similar to major pollen allergen Cup a 1 SP:Q9SCG9 from [Cupressus arizonica] 2 2 21 13 At5g12040 "carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 2 2 21 14 At5g12080 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 2 2 21 15 At5g12250 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} 2 2 21 16 At5g12310 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 21 17 At5g12460 fringe-related protein similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 21 18 At5g12860 "oxoglutarate/malate translocator, putative similar to 2-oxoglutarate/malate translocator precursor, spinach, SWISSPROT:Q41364" 2 2 21 19 At5g13050 5-formyltetrahydrofolate cyclo-ligase (5-FCL) nearly identical to gi:22087553 2 2 21 20 At5g13110 "glucose-6-phosphate 1-dehydrogenase, putative / G6PD, putative similar to SP|Q43839 Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) {Solanum tuberosum}; contains Pfam profiles PF02781: Glucose-6-phosphate dehydrogenase C-terminal, PF00479: Glucose-6-phosphate dehydrogenase NAD binding domain" 2 2 21 21 At5g15850 zinc finger protein CONSTANS-LIKE 1 (COL1) identical to Zinc finger protein CONSTANS-LIKE 1 SP:O50055 from [Arabidopsis thaliana] 2 2 21 22 At5g15890 expressed protein 2 2 21 23 At5g16070 "chaperonin, putative similar to SWISS-PROT:P80317 T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 2 2 21 24 At5g16130 "40S ribosomal protein S7 (RPS7C) 40S ribosomal protein S7 homolog - Brassica oleracea, EMBL:AF144752" 2 2 21 25 At5g16290 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 2 2 22 1 At5g16330 NC domain-containing protein contains Pfam profile PF04970: NC domain 2 2 22 2 At5g16490 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 2 2 22 3 At5g16540 "zinc finger (CCCH-type) family protein identical to zinc finger protein 3 [Arabidopsis thaliana] gi|4689376|gb|AAD27875; contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 2 2 22 4 At5g19110 extracellular dermal glycoprotein-related / EDGP-related similar to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741 2 2 22 5 At5g19170 "expressed protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 2 2 22 6 At5g19330 "armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651" 2 2 22 7 At5g19370 "rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein low similarity to MPT-synthase sulfurylase [Synechococcus sp. PCC 7942] GI:2950364; contains Pfam profiles PF00581: Rhodanese-like domain, PF00639: PPIC-type PPIASE domain; identical to cDNA peptidyl-prolyl cis-trans isomerase GI:2246379" 2 2 22 8 At5g19530 spermine/spermidine synthase family protein similar to SP|P09158 Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) {Escherichia coli}; contains Pfam profile PF01564: Spermine/spermidine synthase 2 2 22 9 At5g19590 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 2 22 10 At5g19770 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} 2 2 22 11 At5g19830 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 2 2 22 12 At5g23150 PWWP domain-containing protein identical to cDNA putative transcription factor (HUA2) GI:4868119; contains Pfam profile PF00855: PWWP domain 2 2 22 13 At5g23210 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 2 2 22 14 At5g23350 "GRAM domain-containing protein / ABA-responsive protein-related contains similarity to ABA-responsive protein in barley (GI:4103635) [Hordeum vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam PF02893: GRAM domain" 2 2 22 15 At5g23400 "disease resistance family protein / LRR family protein similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591; contains leucine rich-repeat domain Pfam:PF00560, INTERPRO:IPR001611" 2 2 22 16 At5g23535 KOW domain-containing protein simlar to SP|P12876 50S ribosomal protein L24 (BL23) (12 kDa DNA-binding protein) (HPB12) {Bacillus subtilis}; contains Pfam profile PF00467: KOW motif 2 2 22 17 At5g23590 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|P39101 CAJ1 protein Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain 2 2 22 18 At5g23760 heavy-metal-associated domain-containing protein Pfam profile PF00403: Heavy-metal-associated domain 2 2 22 19 At5g23820 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 2 2 22 20 At5g26670 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 2 2 22 21 At5g26630 "MADS-box protein (AGL35) homeotic protein boi1AP3, Brassica oleracea, EMBL:U67453; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain)" 2 2 22 22 At5g26805 expressed protein 2 2 22 23 At5g26860 "Lon protease homolog 2, mitochondrial almost identical to Lon protease homolog 2 mitochondrial precursor SP:P93655, GI:1848290 from [Arabidopsis thaliana]" 2 2 22 24 At5g27050 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 2 22 25 At5g27110 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 23 1 At5g27310 expressed protein 2 2 23 2 At5g27370 hypothetical protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 2 2 23 3 At5g35410 "CBL-interacting protein kinase 24 (CIPK24) / serine/threonine protein kinase (SOS2) identical to CBL-interacting protein kinase 24 [Arabidopsis thaliana] GP|14701910|gb|AAK72257, serine/threonine protein kinase SOS2 [Arabidopsis thaliana] GI:7453645" 2 2 23 4 At5g35480 expressed protein 2 2 23 5 At5g35620 eukaryotic translation initiation factor 4E 2 / eIF-4E2 / mRNA cap-binding protein 2 (EIF4E2) identical to SP|O04663 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(ISO)4F P28 subunit) (eIF4Eiso protein) {Arabidopsis thaliana} 2 2 23 6 At5g35670 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 2 2 23 7 At5g35794 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 2 23 8 At5g35870 hypothetical protein similar to unknown protein (gb|AAD25831.1) 2 2 23 9 At5g36030 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; simlar to At4g19310, At5g36030" 2 2 23 10 At5g36080 hypothetical protein 2 2 23 11 At5g39290 "expansin, putative (EXP26) similar to alpha-expansin 4 precursor GI:16923355 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 2 2 23 12 At5g39350 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 23 13 At5g39530 "expressed protein hypothetical protein, Synechocystis sp., PIR:S77152" 2 2 23 14 At5g39590 expressed protein 2 2 23 15 At5g39770 repair endonuclease family protein contains Pfam PF02732 : ERCC4 domain; similar to MUS81 endonuclease (GI:16755674) [Mus musculus]; similar to repair endonuclease (TIGR:At5g41150) [Arabidopsis thaliana] 2 2 23 16 At5g39830 "DegP protease, putative contains similarity to DegP protease precursor GI:2565436 from [Arabidopsis thaliana]" 2 2 23 17 At5g39990 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 2 2 23 18 At5g40050 F-box family protein contains F-box domain Pfam:PF00646 2 2 23 19 At5g42820 "U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary factor, small subunit [Oryza sativa] GI:3850816" 2 2 23 20 At5g42850 expressed protein 2 2 23 21 At5g42965 hypothetical protein 2 2 23 22 At5g43020 "leucine-rich repeat transmembrane protein kinase, putative " 2 2 23 23 At5g43185 Expressed protein 2 2 23 24 At5g43240 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 2 2 23 25 At5g43405 hypothetical protein 2 2 24 1 At5g43460 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]" 2 2 24 2 At5g46040 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 2 2 24 3 At5g46100 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 24 4 At5g46210 "cullin, putative similar to SP|Q13619 Cullin homolog 4A (CUL-4A) {Homo sapiens}; contains Pfam profile PF00888: Cullin family" 2 2 24 5 At5g46250 RNA recognition motif (RRM)-containing protein contains similarity to RNA-binding protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 2 24 6 At5g46410 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 2 24 7 At5g46450 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 24 8 At5g46630 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 2 2 24 9 At5g46670 "CHP-rich zinc finger protein, putative contains similarity to CHP-rich zinc finger protein" 2 2 24 10 At5g49290 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 2 2 24 11 At5g49360 glycosyl hydrolase family 3 protein 2 2 24 12 At5g49520 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 24 13 At5g49560 expressed protein similar to SP|P40389 Rapid response to glucose protein 1 {Schizosaccharomyces pombe} 2 2 24 14 At5g49710 expressed protein similar to unknown protein (pir||T05575) 2 2 24 15 At5g49750 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 2 2 24 16 At5g49930 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 2 24 17 At5g49970 pyridoxamine 5'-phosphate oxidase-related contains weak similarity to Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx). (Swiss-Prot:P28225) [Shigella flexneri] 2 2 24 18 At5g52720 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 2 2 24 19 At5g52780 expressed protein similar to unknown protein (pir||T04431) 2 2 24 20 At5g52960 expressed protein similar to unknown protein (pir |S77140) 2 2 24 21 At5g53000 protein phosphatase 2A-associated 46 kDa protein / PP2A regulatory subunit (TAP46) identical to PP2A regulatory subunit (46 kDa protein phosphatase 2A-associated protein) (TAP46) [Arabidopsis thaliana] GI:5107033; contains Pfam profile PF04177: TAP42-like family 2 2 24 22 At5g53150 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226: DnaJ domain 2 2 24 23 At5g53200 myb family transcription factor (TRIPTYCHON) contains Pfam profile: PF00249 myb-like DNA-binding domain 2 2 24 24 At5g53380 hypothetical protein 2 2 24 25 At5g53440 expressed protein 2 2 25 1 At5g56100 glycine-rich protein / oleosin contains Pfam PF01277: Oleosin domain 2 2 25 2 At5g56160 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and SEC14 cytosolic factor (SP:P45816) [Candida lipolytica] 2 2 25 3 At5g56320 "expansin, putative (EXP14) similar to alpha-expansin 3 GI:6942322 from [Triphysaria versicolor]; alpha-expansin gene family, PMID:11641069" 2 2 25 4 At5g56370 F-box family protein contains F-box domain Pfam:PF00646 2 2 25 5 At5g56540 arabinogalactan-protein (AGP14) identical to gi|10880505|gb|AAG24282 2 2 25 6 At5g56600 profilin 5 (PRO5) (PRF3) identical to SP|Q9FE63 Profilin 5 {Arabidopsis thaliana} 2 2 25 7 At5g56780 expressed protein contains similarity to transcription repressor 2 2 25 8 At5g56850 expressed protein 2 2 25 9 At5g59370 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} 2 2 25 10 At5g59410 expressed protein 2 2 25 11 At5g59560 sensitivity to red light reduced protein (SRR1) identical to sensitivity to red light reduced protein [Arabidopsis thaliana] GI:25527089; supporting cDNA gi|25527088|gb|AY127047.1| 2 2 25 12 At5g59613 expressed protein 2 2 25 13 At5g59800 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 2 2 25 14 At5g59845 gibberellin-regulated family protein similar to SP|P27057 GAST1 protein precursor {Lycopersicon esculentum}; contains Pfam profile PF02704: Gibberellin regulated protein 2 2 25 15 At5g59960 expressed protein 2 2 25 16 At5g60020 "laccase, putative / diphenol oxidase, putative similar to laccase LAC2-4, Liriodendron tulipifera, EMBL:LTU73106 [GI:1621467]" 2 2 25 17 At5g62710 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 2 25 18 At5g62750 "expressed protein predicted proteins, Caenorhabditis elegans" 2 2 25 19 At5g62910 "expressed protein predicted proteins, Arabidopsis thaliana" 2 2 25 20 At5g62970 F-box family protein contains F-box domain Pfam:PF00646 2 2 25 21 At5g63110 "histone deacetylase, putative similar to SP|O22446 Histone deacetylase (HD) {Arabidopsis thaliana}; contains Pfam profile PF00850: Histone deacetylase family" 2 2 25 22 At5g63140 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 2 25 23 At5g63330 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 2 25 24 At5g63400 adenylate kinase identical to adenylate kinase (ATP-AMP transphosphorylase) [Arabidopsis thaliana] SWISS-PROT:O82514 2 2 25 25 At5g65940 3-hydroxyisobutyryl-coenzyme A hydrolase / CoA-thioester hydrolase (CHY1) identical to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 2 2 26 1 At5g66000 expressed protein 2 2 26 2 At5g66055 ankyrin repeat protein / AKRP (AKR) identical to ankyrin repeat protein (AKRP) [Arabidopsis thaliana] SWISS-PROT:Q05753 2 2 26 3 At5g66110 heavy-metal-associated domain-containing protein similar to farnesylated protein TFP6 [GI:4097553]; contains Heavy-metal-associated domain PF00403 2 2 26 4 At5g66250 kinectin-related contains weak similarity to kinectin (GI:3766232) [Vulpes vulpes] 2 2 26 5 At5g66280 "GDP-D-mannose 4,6-dehydratase, putative strong similarity to GDP-D-mannose-4,6-dehydratase [Arabidopsis thaliana] GI:1764100" 2 2 26 6 At5g66420 expressed protein 2 2 26 7 At5g66480 expressed protein similar to unknown protein (pir||T08412) 2 2 26 8 3xSSC 3xSSC 2 2 26 9 3xSSC 3xSSC 2 2 26 10 3xSSC 3xSSC 2 2 26 11 3xSSC 3xSSC 2 2 26 12 3xSSC 3xSSC 2 2 26 13 3xSSC 3xSSC 2 2 26 14 3xSSC 3xSSC 2 2 26 15 3xSSC 3xSSC 2 2 26 16 At3g45610 Dof-type zinc finger domain-containing protein identical to dof6 zinc finger protein GI:5689615 from [Arabidopsis thaliana] 2 2 26 17 At3g45670 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 2 26 18 At3g45830 expressed protein 2 2 26 19 At3g45890 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 2 2 26 20 At3g46070 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 2 2 26 21 At3g46130 myb family transcription factor (MYB48) contains Pfam profile: PF00249 myb-like DNA-binding domain 2 2 26 22 At3g46320 histone H4 nearly identical to histone H4 [Arabidopsis thaliana] GI:166740 2 2 26 23 At3g46380 hypothetical protein 2 2 26 24 Blank Blank 2 2 26 25 Blank Blank 2 3 1 1 atc05 Randomly generated negative control 2 3 1 2 atc11 Randomly generated negative control 2 3 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 2 3 1 4 atc01 Randomly generated negative control 2 3 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 2 3 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 3 1 7 atc09 Randomly generated negative control 2 3 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 2 3 1 9 At1g01140 CBL-interacting protein kinase 9 (CIPK9) identical to CBL-interacting protein kinase 9 [Arabidopsis thaliana] gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 2 3 1 10 At1g01180 expressed protein 2 3 1 11 At1g01370 "centromeric histone H3 HTR12 (HTR12) similar to histone H3 GB:X17141 GI:10795 from Tetrahymena pyriformis, GI:161790 from Tetrahymena thermophila; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 3 1 12 At1g01430 expressed protein similar to hypothetical protein GB:CAB80917 GI:7267605 from [Arabidopsis thaliana] 2 3 1 13 At1g01600 "cytochrome P450, putative similar to cytochrome P450 GI:10442763 from [Triticum aestivum]" 2 3 1 14 At1g01650 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 2 3 1 15 At1g01820 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) 2 3 1 16 At1g01910 "anion-transporting ATPase, putative similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase" 2 3 1 17 At1g04470 expressed protein EST gb|ATTS5672 comes from this gene 2 3 1 18 At1g04530 expressed protein 2 3 1 19 At1g04650 hypothetical protein 2 3 1 20 At1g04710 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase" 2 3 1 21 At1g04890 "hypothetical protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 2 3 1 22 At1g04950 TATA box-binding protein-associated factor (TAF) family protein contains Pfam profile: PF02969 TATA box binding protein associated factor 2 3 1 23 At1g05085 hypothetical protein 2 3 1 24 At1g05160 "ent-kaurenoic acid hydroxylase (KAO1) / cytochrome P450 88A3, putative (CYP88A3) identical to Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana]; nearly identical to ent-kaurenoic acid hydroxylase (KAO1) GI:13021852 from [Arabidopsis thaliana]" 2 3 1 25 At1g07725 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 3 2 1 At1g07770 "40S ribosomal protein S15A (RPS15aA) identical to GB:AAA61608 from [Arabidopsis thaliana] (Plant Physiol. 106 (1), 401-402 (1994))" 2 3 2 2 At1g07880 "mitogen-activated protein kinase, putative / MAPK, putative (MPK13) mitogen-activated protein kinase (MAPK)(AtMPK13), PMID:12119167; similar to GB:CAB37188 from [Medicago sativa]" 2 3 2 3 At1g07930 "elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990))" 2 3 2 4 At1g08050 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|P79263 Inter-alpha-trypsin inhibitor heavy chain H4 precursor {Sus scrofa}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 3 2 5 At1g08100 high-affinity nitrate transporter (ACH2) identical to high-affinity nitrate transporter ACH2 [Arabidopsis thaliana] GI:3608364 2 3 2 6 At1g08250 prephenate dehydratase family protein contains similarity to prephenate dehydratase GI:1008717 from [Amycolatopsis methanolica] 2 3 2 7 At1g08290 "zinc finger (C2H2 type) protein (WIP3) identical to WIP3 protein [Arabidopsis thaliana] gi|18027014|gb|AAL55723; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 2 8 At1g10840 eukaryotic translation initiation factor 3 subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to SP|Q9C5Z2 Eukaryotic translation initiation factor 3 subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) {Arabidopsis thaliana}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 2 3 2 9 At1g10920 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 2 10 At1g11100 "SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related similar to RUSH-1alpha [Oryctolagus cuniculus] GI:1655930; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 2 3 2 11 At1g11170 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 2 3 2 12 At1g11320 expressed protein identical to hypothetical protein GB:AAD49990 GI:5734725 from [Arabidopsis thaliana] 2 3 2 13 At1g11360 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family domain; similar to ethylene-responsive ER6 protein (GI:5669654) [Lycopersicon esculentum] 2 3 2 14 At1g11510 DNA-binding storekeeper protein-related similar to storekeeper protein GI:14268476 [Solanum tuberosum] 2 3 2 15 At1g11570 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 2 3 2 16 At1g14340 RNA recognition motif (RRM)-containing protein 2 3 2 17 At1g14390 "leucine-rich repeat transmembrane protein kinase, putative similar to putative receptor-like protein kinase GI:2947063 from [Arabidopsis thaliana]" 2 3 2 18 At1g14540 "anionic peroxidase, putative similar to lignin forming anionic peroxidase [Nicotiana sylvestris] SWISS-PROT: Q02200" 2 3 2 19 At1g14600 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 2 3 2 20 At1g14740 expressed protein 2 3 2 21 At1g14780 expressed protein 2 3 2 22 At1g14930 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:20810] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 2 3 2 23 At1g14990 expressed protein 2 3 2 24 At1g17680 "transcription factor-related low similarity to SP|P33339 Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) Saccharomyces cerevisiae, transcription factor IIIC102 short isoform [Homo sapiens] GI:18481637" 2 3 2 25 At1g17720 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 2 3 3 1 At1g17850 expressed protein 2 3 3 2 At1g17910 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 2 3 3 3 At1g18090 "exonuclease, putative similar to Swiss-Prot:P53695 exonuclease I (EXO I) [Schizosaccharomyces pombe]" 2 3 3 4 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains Pfam profile: PF00254 FKBP-type peptidyl-prolyl cis-trans isomerases 2 3 3 5 At1g18340 basal transcription factor complex subunit-related similar to TFIIH basal transcription factor complex p34 subunit (Basic transcription factor 2 34 kDa subunit) (BTF2-p34) (General transcription factor IIH polypeptide 3) (SP:Q8VD76) {Mus musculus}; contains Pfam PF03850: Transcription factor Tfb4 2 3 3 6 At1g18400 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 3 7 At1g21310 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 2 3 3 8 At1g21340 Dof-type zinc finger domain-containing protein contains similaity to DNA-binding protein GB:X66076 GI:517257 from [Zea mays] 2 3 3 9 At1g21520 expressed protein 2 3 3 10 At1g21580 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 3 11 At1g21740 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 2 3 3 12 At1g21780 "BTB/POZ domain-containing protein Contains similarity to gb|AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF|00651 BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221, gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come from this gene;supported by full-length" 2 3 3 13 At1g21970 "CCAAT-box binding transcription factor (LEC1) similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; identical to GB:AAC39488 GI:3282674 from [Arabidopsis thaliana] (Cell 93 (7), 1195-1205 (1998)); identified in Plant Cell 2003 Jan;15(1):5-18; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 2 3 3 14 At1g22020 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 2 3 3 15 At1g24590 "AP2 domain-containing transcription factor, putative contains AP2 DNA-binding domain" 2 3 3 16 At1g24706 expressed protein 2 3 3 17 At1g25270 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 3 3 18 At1g25300 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to unknown protein GI:4262226 from [Arabidopsis thaliana] contains Pfam profile PF00564: PB1 domain 2 3 3 19 At1g25460 "oxidoreductase family protein similar to dihydroflavonol 4-reductase GI:1332411 from [Rosa hybrida], cinnamoyl CoA reductase from Pinus taeda [gi:17978649], Eucalyptus gunnii [gi:2058311]" 2 3 3 20 At1g25510 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 2 3 3 21 At1g26160 metal-dependent phosphohydrolase HD domain-containing protein contains Pfam profile PF01966: HD domain 2 3 3 22 At1g26230 "chaperonin, putative similar to SWISS-PROT:P08927- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) [Pisum sativum]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 2 3 3 23 At1g29100 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 2 3 3 24 At1g29170 expressed protein ; expression supported by MPSS 2 3 3 25 At1g29355 expressed protein 2 3 4 1 At1g29395 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 2 3 4 2 At1g29560 expressed protein ; expression supported by MPSS 2 3 4 3 At1g29620 hypothetical protein 2 3 4 4 At1g29810 dehydratase family similar to Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) (PHS) (4-alpha- hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD). (Swiss-Prot:P43335) [Pseudomonas aeruginosa]; contains Pfam PF01329: pterin-4-alpha-carbinolamine dehydratase 2 3 4 5 At1g29850 double-stranded DNA-binding family protein contains Pfam profile: PF01984 double-stranded DNA-binding domain 2 3 4 6 At1g32700 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 2 3 4 7 At1g32760 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 2 3 4 8 At1g32960 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 [Oryza sativa] 2 3 4 9 At1g33010 F-box family protein 2 3 4 10 At1g33220 "beta-1,3-glucanase, putative similar to plant beta-1,3-glucanase bg4 GI:2808438 from [Arabidopsis thaliana]" 2 3 4 11 At1g33270 patatin-related contains Patatin domain PF01734 2 3 4 12 At1g33470 RNA recognition motif (RRM)-containing protein similar to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 3 4 13 At1g33530 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 3 4 14 At1g43000 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 2 3 4 15 At1g43100 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 3 4 16 At1g43610 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 3 4 17 At1g43665 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 2 3 4 18 At1g43850 SEUSS transcriptional co-regulator identical to SEUSS transcriptional co-regulator [Arabidopsis thaliana] gi|18033922|gb|AAL57277 2 3 4 19 At1g43910 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 3 4 20 At1g44130 "nucellin protein, putative similar to nucellin GI:2290202 from [Hordeum vulgare]" 2 3 4 21 At1g44318 "porphobilinogen synthase, putative / delta-aminolevulinic acid dehydratase, putative similar to delta-aminolevulinic acid dehydratase (Alad) GI:493019 [SP|P43210] from Glycine max, SP|P24493 from Spinacia oleracea, SP|P30124 from Pisum sativum" 2 3 4 22 At1g49260 hypothetical protein 2 3 4 23 At1g49330 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 4 24 At1g49520 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 2 3 4 25 At1g49590 formin-binding protein-related similar to formin binding protein 21 (GI:3550080) [Homo sapiens]; similar to formin binding protein 21 (GI:3550077) [Mus musculus]; similar to Dinap1-interacting protein 1 (GI:8745458) [Crypthecodinium cohnii] 2 3 5 1 At1g49760 "polyadenylate-binding protein, putative / PABP, putative similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from [Nicotiana tabacum]" 2 3 5 2 At1g49820 5-methylthioribose kinase family contains TIGRfam TIGR01767: 5-methylthioribose kinase profile 2 3 5 3 At1g49970 ATP-dependent Clp protease proteolytic subunit (ClpR1) (nClpP5) identical to nClpP5 GB:BAA82069 GI:5360595 from [Arabidopsis thaliana]; identical to cDNA nClpP5 (nuclear encoded ClpP5) GI:5360594 2 3 5 4 At1g50020 expressed protein 2 3 5 5 At1g52880 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM (no apical meristem) GB:CAA63101 from [Petunia x hybrida]; identical to cDNA NAC domain protein GI:4325285 2 3 5 6 At1g52930 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 2 3 5 7 At1g53100 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 2 3 5 8 At1g53160 squamosa promoter-binding protein-like 4 (SPL4) nearly identical to squamosa promoter binding protein-like 4 [Arabidopsis thaliana] GI:5931657; contains Pfam profile PF03110: SBP domain 2 3 5 9 At1g53310 "phosphoenolpyruvate carboxylase, putative / PEP carboxylase, putative (PPC1) strong similarity to SP|P29196 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCASE) {Solanum tuberosum}; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase" 2 3 5 10 At1g53350 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 5 11 At1g53520 chalcone-flavanone isomerase-related low similarity to GI:499036 (Vitis vinifera) 2 3 5 12 At1g53570 "mitogen-activated protein kinase kinase kinase (MAPKKK), putative (MAP3Ka) identical to MEK kinase (MAP3Ka)[Arabidopsis thaliana] gi|4204912|gb|AAD10848" 2 3 5 13 At1g56170 "transcription factor, putative similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 2 3 5 14 At1g56220 dormancy/auxin associated family protein similar to Auxin-repressed 12.5 kDa protein (Swiss-Prot:Q05349) [Fragaria ananassa]; similar to auxin-repressed protein (GI:927034) [Fragaria x ananassa]; similar to dormancy-associated protein (GI:2605887) [Pisum sativum] 2 3 5 15 At1g56380 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 2 3 5 16 At1g56440 "serine/threonine protein phosphatase-related similar to SP|Q60676 Serine/threonine protein phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase T) (PPT) Mus musculus, Tetratricopeptide Repeats Of Protein Phosphatase 5 [Homo sapiens] GI:3212250; contains Pfam profile: PF00515: TPR Domain" 2 3 5 17 At1g56650 myb family transcription factor (MYB75) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB75) GI:3941507 2 3 5 18 At1g56710 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 3 5 19 At1g57660 60S ribosomal protein L21 (RPL21E) similar to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from [Arabidopsis thaliana] 2 3 5 20 At1g57730 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 2 3 5 21 At1g61600 expressed protein 2 3 5 22 At1g61660 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 2 3 5 23 At1g61820 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 2 3 5 24 At1g61890 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 2 3 5 25 At1g62050 ankyrin repeat protein-related contains weak hit to Pfam profile PF00023: Ankyrin repeat 2 3 6 1 At1g62120 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 3 6 2 At1g62300 WRKY family transcription factor similar to putative DNA-binding protein GI:7268215 from [Arabidopsis thaliana] 2 3 6 3 At1g62350 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 6 4 At1g65060 4-coumarate--CoA ligase 3 / 4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777 4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3) (4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana} 2 3 6 5 At1g65120 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 2 3 6 6 At1g65260 "PspA/IM30 family protein contains Pfam PF04012: PspA/IM30 family profile; similar to Membrane-associated 30 kDa protein, chloroplast precursor (M30) (Swiss-Prot:Q03943) [Pisum sativum]; similar to phage shock protein A (GI:28806161) [Vibrio parahaemolyticus]; similar to Phage shock protein A. (Swiss-Prot:P23853) [Shigella flexneri]" 2 3 6 7 At1g65295 expressed protein 2 3 6 8 At1g65445 transferase-related similar to N-hydroxycinnamoyl/benzoyltransferase (GI:6469032) [Ipomoea batatas];similar to hydroxycinnamoyl transferase (GI:27475616) [Nicotiana tabacum] 2 3 6 9 At1g65510 expressed protein 2 3 6 10 At1g65710 expressed protein ; expression supported by MPSS 2 3 6 11 At1g65780 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 2 3 6 12 At1g68510 LOB domain protein 42 / lateral organ boundaries domain protein 42 (LBD42) identical to LOB DOMAIN 42 [Arabidopsis thaliana] GI:17227174; supported by full-length cDNA gi:17227173. 2 3 6 13 At1g68550 "AP2 domain-containing transcription factor, putative contains Pfam profile: PF00847 AP2 domain" 2 3 6 14 At1g68710 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, {Bos taurus} SP|Q29449, {Homo sapiens} SP|O43520; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 6 15 At1g68760 MutT/nudix family protein similar to SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13) {Methanococcus jannaschii}; contains Pfam profile PF00293: NUDIX domain 2 3 6 16 At1g68920 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 6 17 At1g68945 expressed protein 2 3 6 18 At1g69160 expressed protein 2 3 6 19 At1g69220 "serine/threonine protein kinase, putative identical to serine/threonine kinase [Arabidopsis thaliana] gi|2352084|gb|AAB68776" 2 3 6 20 At1g71930 no apical meristem (NAM) family protein similar to NAM GB:CAA63101 from [Petunia x hybrida] 2 3 6 21 At1g71990 "alpha-(1,4)-fucosyltransferase / galactoside 3(4)-L-fucosyltransferase (FUT13) (FucTC) identical to SP|Q9C8W3 Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M) (Galactoside 3(4)- L-fucosyltransferase) (FucTC) (AtFUT13) {Arabidopsis thaliana}; identical to cDNA alpha1,3-fucosyltransferase homologue (FucTC) GI:13992485" 2 3 6 22 At1g72140 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 2 3 6 23 At1g72190 "oxidoreductase family protein similar to D-3-phosphoglycerate dehydrogenase from Arabidopsis thaliana [SP|O04130], glyoxylate reductase from Homo sapiens (gi:6002730); contains Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826" 2 3 6 24 At1g72370 40S ribosomal protein SA (RPSaA) identical to laminin receptor-like protein GB:U01955 [Arabidopsis thaliana]; identical to cDNA laminin receptor homologue GI:16379 2 3 6 25 At1g72440 "CCAAT-box-binding transcription factor-related similar to CCAAT-box-binding transcription factor (CCAAT-binding factor) (CBF) (Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus musculus]" 2 3 7 1 At1g72600 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 7 2 At1g72650 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain 2 3 7 3 AT5G57480 PC-1 C11 2 3 7 4 3XSSC PC-1 C23 2 3 7 5 AT1G29930 PC-1 G11 2 3 7 6 3XSSC PC-1 G23 2 3 7 7 AT3G44150 PC-1 K11 2 3 7 8 3XSSC PC-1 K23 2 3 7 9 AT4G00810 PC-1 O11 2 3 7 10 3XSSC PC-1 O23 2 3 7 11 At1g75430 "homeodomain-containing protein contains 'Homeobox' domain signature, Prosite:PS00027" 2 3 7 12 At1g75500 "nodulin MtN21 family protein similar to MtN21 GB:CAA75575 GI:2598575 from (Medicago truncatula) (Mol. Plant Microbe Interact. 9 (4), 233-242 (1996)); contains Pfam profile PF00892: Integral membrane protein" 2 3 7 13 At1g75700 "abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 2 3 7 14 At1g75770 expressed protein 2 3 7 15 At1g75930 family II extracellular lipase 6 (EXL6) EXL6 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 2 3 7 16 At1g76010 expressed protein 2 3 7 17 At1g76160 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 2 3 7 18 At1g76210 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 2 3 7 19 At1g78830 curculin-like (mannose-binding) lectin family protein similar to S glycoprotein [Brassica rapa] GI:2351186; contains Pfam profile PF01453: Lectin (probable mannose binding) 2 3 7 20 At1g78880 balbiani ring 1-related / BR1-related contains weak similarity to BR1 [Chironomus tentans] gi|7042|emb|CAA45607 2 3 7 21 At1g79020 transcription factor-related similar to enhancer of polycomb (GI:3757890) [Drosophila melanogaster]; similar to enhancer of polycomb (GI:11907923) [Homo sapiens] 2 3 7 22 At1g79080 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 7 23 At1g79260 expressed protein 2 3 7 24 At1g79340 "latex-abundant protein, putative (AMC7) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain" 2 3 7 25 At1g79480 "hypothetical protein low similarity to beta-1,3-glucanase-like protein GI:9758115 from [Arabidopsis thaliana]" 2 3 8 1 At1g79510 expressed protein 2 3 8 2 At2g02130 "plant defensin-fusion protein, putative (PDF2.3) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)" 2 3 8 3 At2g02220 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 8 4 At2g02440 hypothetical protein 2 3 8 5 At2g02490 hydroxyproline-rich glycoprotein family protein related to LENOD2 [Lupinus luteus] gi|296830|emb|CAA39050; and genefinder 2 3 8 6 At2g02680 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 3 8 7 At2g02730 expressed protein 2 3 8 8 At2g02890 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 3 8 9 At2g02960 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 2 3 8 10 At2g06520 "membrane protein, putative contains 2 transmembrane domains;" 2 3 8 11 At2g06630 "hypothetical protein similar to At2g12120, At1g45090, At2g05470, At5g28482" 2 3 8 12 At2g07020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 8 13 At2g07120 "F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]" 2 3 8 14 At2g07440 two-component responsive regulator-related / response regulator protein-related similar to response regulator 5 GI:3953599 from [Arabidopsis thaliana]; non-consensus (GC) donor site at intron 1 2 3 8 15 At2g07771 cytochrome c biogenesis protein-related 2 3 8 16 At2g07687 cytochrome c oxidase subunit 3 identical to cytochrome c oxidase subunit 3 (GI:15215914) [Arabidopsis thaliana]; similar to Cytochrome c oxidase polypeptide III (EC 1.9.3.1) (Swiss-Prot:P92514) [Arabidopsis thaliana] 2 3 8 17 At2g07696 ribosomal protein S7 family protein contains Pfam profile PF00177: Ribosomal protein S7p/S5e 2 3 8 18 At2g15325 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 8 19 At2g15370 "xyloglucan fucosyltransferase, putative (FUT5) identical to SP|Q9SJP4 Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from [Arabidopsis thaliana]" 2 3 8 20 At2g15550 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 2 3 8 21 At2g15590 expressed protein 2 3 8 22 At2g15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase identical to cyclophilin-40 [Arabidopsis thaliana] GI:13442983; supporting cDNA gi|13442982|gb|AY026065.1| 2 3 8 23 At2g15880 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 2 3 8 24 At2g16090 "zinc finger protein-related contains similarity to zinc finger proteins and Pfam domain, PF01485: IBR domain" 2 3 8 25 At2g16170 "expressed protein similar to At2g06640, At2g12110, At2g12100, At3g42590, At2g05460" 2 3 9 1 At2g18970 expressed protein 2 3 9 2 At2g19030 rapid alkalinization factor (RALF) family protein 2 3 9 3 At2g19230 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 3 9 4 At2g19300 hypothetical protein 2 3 9 5 At2g19490 recA family protein contains Pfam profile: PF00154 recA bacterial DNA recombination protein 2 3 9 6 At2g19550 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains esterase/lipase/thioesterase active site serine (PS50187) (Interpro entry IPR000379) and alpha/beta hydrolase fold (PF00561). 2 3 9 7 At2g19690 "phospholipase A2 beta, secretory low molecular weight identical to secretory low molecular weight phospholipase A2 beta [Arabidopsis thaliana] GI:25992715; contains INTERPRO domain IPR001211 phospholipase A2" 2 3 9 8 At2g19750 40S ribosomal protein S30 (RPS30A) 2 3 9 9 At2g22440 hypothetical protein 2 3 9 10 At2g22490 cyclin delta-2 (CYCD2) identical to SP|P42752 Cyclin delta-2 {Arabidopsis thaliana} 2 3 9 11 At2g22680 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 3 9 12 At2g22750 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 9 13 At2g22910 "GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) {Escherichia coli}; contains Pfam profiles PF00696: Amino acid kinase family, PF00583: acetyltransferase, GNAT family" 2 3 9 14 At2g22970 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 3 9 15 At2g23090 expressed protein 2 3 9 16 At2g23130 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 2 3 9 17 At2g26020 "plant defensin-fusion protein, putative (PDF1.2b) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 2 3 9 18 At2g26060 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD40-repeat containing protein Ciao 1 (SP:O76071) [Homo sapiens] 2 3 9 19 At2g26250 beta-ketoacyl-CoA synthase family (FIDDLEHEAD) (FDH) identical to GB:AJ010713 (fiddlehead protein) 2 3 9 20 At2g26310 expressed protein 2 3 9 21 At2g26490 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); related to En/Spm transposon family of maize 2 3 9 22 At2g26530 expressed protein 2 3 9 23 At2g26690 nitrate transporter (NTP2) identical to nitrate transporter (ntp2) [Arabidopsis thaliana] GI:4490321 2 3 9 24 At2g26740 "epoxide hydrolase, soluble (sEH) identical to ATsEH [Arabidopsis thaliana] GI:1109600" 2 3 9 25 At2g29390 "sterol 4-alpha-methyl-oxidase 1 (SMO1) nearly identical to sterol 4-alpha-methyl-oxidase GI:16973469 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase (SMO) partial cds, GI:16973431" 2 3 10 1 At2g29460 "glutathione S-transferase, putative " 2 3 10 2 At2g29610 F-box family protein contains Pfam profile PF00646: F-box domain 2 3 10 3 At2g29650 "inorganic phosphate transporter, putative similar to brain specific Na+-dependent inorganic phosphate cotransporter [Rattus norvegicus] GI:507415; contains Pfam profile PF00083: major facilitator superfamily protein" 2 3 10 4 At2g29820 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 2 3 10 5 At2g29880 hypothetical protein 2 3 10 6 At2g30020 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C (GI:4587992){Arabidopsis thaliana}" 2 3 10 7 At2g30090 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 10 8 At2g32710 kip-related protein 4 (KRP4) / cyclin-dependent kinase inhibitor 4 (ICK4) nearly identical to cyclin-dependent kinase inhibitor 4 (krp4) [Arabidopsis thaliana] GI:14422291 2 3 10 9 At2g32750 exostosin family protein contains Pfam profile: PF03016 exostosin family 2 3 10 10 At2g32890 hypothetical protein 2 3 10 11 At2g32940 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 2 3 10 12 At2g33120 synaptobrevin-related protein / vesicle-associated membrane protein 722 (VAMP722) (SAR1) identical to r to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; identical to cDNA synaptobrevin-related protein (SAR1) GI:600709 2 3 10 13 At2g33190 F-box family protein contains F-box domain Pfam:PF00646 2 3 10 14 At2g33330 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 2 3 10 15 At2g33370 60S ribosomal protein L23 (RPL23B) 2 3 10 16 At2g35960 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 2 3 10 17 At2g36000 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 3 10 18 At2g36145 expressed protein 2 3 10 19 At2g36210 auxin-responsive family protein similar to auxin-induced protein SAUR-AC1 (GI:546362) (PIR:T06084) [Arabidopsis thaliana] 2 3 10 20 At2g36370 F-box family protein (FBL11) contains similarity to leucine-rich repeats containing F-box protein FBL3 GI:5919219 from [Homo sapiens] 2 3 10 21 At2g36410 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 2 3 10 22 At2g36590 "proline transporter, putative strong similarity to proline transporter 1 GI:1769901 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 2 3 10 23 At2g36660 "polyadenylate-binding protein, putative / PABP, putative " 2 3 10 24 At2g39220 patatin family protein similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734 2 3 10 25 At2g39280 RabGAP/TBC domain-containing protein contains Pfam profile PF00566: TBC domain 2 3 11 1 At2g39430 disease resistance-responsive protein-related / dirigent protein-related contains similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669; contains similarity to dirigent protein [Thuja plicata] gi|6694709|gb|AAF25365 2 3 11 2 At2g39490 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 3 11 3 At2g39680 expressed protein 2 3 11 4 At2g39725 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 2 3 11 5 At2g39830 LIM domain-containing protein contains Pfam profile PF00412: LIM domain 2 3 11 6 At2g39870 expressed protein 2 3 11 7 At2g42360 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 11 8 At2g42400 expressed protein 2 3 11 9 At2g42550 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 11 10 At2g42610 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 2 3 11 11 At2g42770 "peroxisomal membrane 22 kDa family protein contains Mpv17 / PMP22 family domain, Pfam:PF04117" 2 3 11 12 At2g42830 agamous-like MADS box protein AGL5 / floral homeodomain transcription factor (AGL5) identical to SP|P29385 Agamous-like MADS box protein AGL5 {Arabidopsis thaliana} 2 3 11 13 At2g42980 aspartyl protease family protein contains pfam profile: PF00026 eukaryotic aspartyl protease 2 3 11 14 At2g43030 ribosomal protein L3 family protein contains Pfam profile PF00297: ribosomal protein L3 2 3 11 15 At2g45710 40S ribosomal protein S27 (RPS27A) 2 3 11 16 At2g45750 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 3 11 17 At2g45930 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 3 11 18 At2g45990 expressed protein 2 3 11 19 At2g46140 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P46518 Late embryogenesis abundant protein Lea14-A {Gossypium hirsutum}; contains Pfam profile PF03168: Late embryogenesis abundant protein" 2 3 11 20 At2g46200 expressed protein low similarity to ES18 [Mus musculus] GI:4416181 2 3 11 21 At2g46330 arabinogalactan-protein (AGP16) identical to gi|10880509|gb|AAG24284 2 3 11 22 At2g46375 expressed protein 2 3 11 23 At3g01730 expressed protein 2 3 11 24 At3g01790 ribosomal protein L13 family protein similar to putative ribosomal protein L13 GB:AAC07691 [Aquifex aeolicus] 2 3 11 25 At3g01920 "yrdC family protein contains Pfam PF01300: yrdC domain; similar to Protein yciO. (Swiss-Prot:P45847) [Shigella flexneri]; similar to Chain A, Crystal Structure Of E. Coli Ycio Length (GI:27573707) [Escherichia coli]" 2 3 12 1 At3g01970 WRKY family transcription factor similar to WRKY1 GB:AAC49527 [Petroselinum crispum] 2 3 12 2 At3g02120 hydroxyproline-rich glycoprotein family protein 2 3 12 3 At3g02160 hypothetical protein 2 3 12 4 At3g02290 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger motif, C3HC4 type (RING finger)" 2 3 12 5 At3g02340 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 2 3 12 6 At3g04970 zinc finger (DHHC type) family protein similar to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 2 3 12 7 At3g05030 "sodium proton exchanger, putative (NHX2) similar to sodium proton exchanger Nhx1 GB:AAD16946 [Arabidopsis thaliana]; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 2 3 12 8 At3g05180 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 2 3 12 9 At3g05240 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 12 10 At3g05420 "acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif" 2 3 12 11 At3g05480 cell cycle checkpoint control protein family contains Pfam profile PF04139: Rad9; contains Prosite PS00976: Myristoyl-CoA:protein N-myristoyltransferase signature 2; similar to radio-resistance/chemo-resistance/cell cycle checkpoint control protein (GI:3869274) [Mus musculus] 2 3 12 12 At3g05610 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 2 3 12 13 At3g05650 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4A protein [Lycopersicon esculentum] gi|3097197|emb|CAA73187" 2 3 12 14 At3g08550 elongation defective 1 protein / ELD1 protein annotation temporarily based on supporting cDNA gi|23452833|gb|AF543710.1| 2 3 12 15 At3g08590 "2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative strong similarity to SP|Q42908 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) {Mesembryanthemum crystallinum}; contains Pfam profile PF01676: Metalloenzyme superfamily" 2 3 12 16 At3g08770 lipid transfer protein 6 (LTP6) identical to GI:8571927 2 3 12 17 At3g08840 D-alanine--D-alanine ligase family similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase) (Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase). (Swiss-Prot:P95803) [Streptococcus mutans] 2 3 12 18 At3g08955 expressed protein 2 3 12 19 At3g09010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 12 20 At3g09140 expressed protein contains Pfam profile PF05056: Protein of unknown function (DUF674); expression supported by MPSS 2 3 12 21 At3g09170 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 3 12 22 At3g11680 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 2 3 12 23 At3g11740 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 2 3 12 24 At3g11890 expressed protein 2 3 12 25 At3g11930 universal stress protein (USP) family protein similar to ER6 protein GB:AAD46412 GI:5669654 from [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 2 3 13 1 At3g12050 Aha1 domain-containing protein contains Pfam PF05146: Aha1 domain; similar to Protein C14orf3 (HSPC322) (Swiss-Prot:O95433) [Homo sapiens] 2 3 13 2 At3g12090 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 2 3 13 3 At3g12230 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase; similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 3 13 4 At3g12270 "protein arginine N-methyltransferase family protein similar to protein arginine N-methyltransferase 3 from {Rattus norvegicus} SP|O70467, {Homo sapiens} SP|O60678" 2 3 13 5 At3g14730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 13 6 At3g14780 expressed protein 2 3 13 7 At3g14890 phosphoesterase identical to phosphoesterase [Arabidopsis thaliana] GI:21630064; contains Pfam profile PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 2 3 13 8 At3g14950 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q99615 DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein 2) {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 2 3 13 9 At3g15090 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to NOGO-interacting mitochondrial protein from Mus musculus [gi:14522884]; contains Pfam profile: PF00107 zinc-binding dehydrogenases" 2 3 13 10 At3g15140 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 3 13 11 At3g15310 expressed protein 2 3 13 12 At3g15356 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 2 3 13 13 At3g17950 expressed protein ; expression supported by MPSS 2 3 13 14 At3g18030 halotolerance protein (HAL3A) identical to GB:AAD51616 from [Arabidopsis thaliana]; similar to Halotolerance protein Hal3b (SP:P94063)[Arabidopsis thaliana]; contains Pfam PF02441: Flavoprotein 2 3 13 15 At3g18170 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 2 3 13 16 At3g18220 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase [Mus musculus] GI:1487873; contains Pfam profile: PF01569 phosphatase PAP2 superfamily 2 3 13 17 At3g18380 expressed protein 2 3 13 18 At3g18430 calcium-binding EF hand family protein similar to Calcineurin B subunit (Protein phosphatase 2B regulatory subunit) (Calcineurin regulatory subunit) SP:P42322 from [Naegleria gruberi]; contains Pfam profile PF00036: EF hand 2 3 13 19 At3g18590 plastocyanin-like domain-containing protein 2 3 13 20 At3g18650 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 3 13 21 At3g21330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 13 22 At3g21390 mitochondrial substrate carrier family protein 2 3 13 23 At3g21570 expressed protein 2 3 13 24 At3g21600 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 2 3 13 25 At3g21730 dihydroneopterin aldolase family protein similar to SP|O33725 Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) {Streptococcus pyogenes}; contains Pfam profile PF02152: dihydroneopterin aldolase 2 3 14 1 At3g21780 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 14 2 At3g21950 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 2 3 14 3 At3g22010 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 2 3 14 4 At3g24715 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 2 3 14 5 At3g24770 "CLE41, putative CLAVATA/ESR-Related 41 (CLE41)" 2 3 14 6 At3g25030 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 3 14 7 At3g25090 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 2 3 14 8 At3g25240 hypothetical protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 3 14 9 At3g25400 expressed protein 2 3 14 10 At3g25580 thioredoxin-related contains weak similarity to thioredoxin (Swiss-Prot:O17486) [Echinococcus granulosus] 2 3 14 11 At3g25610 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Mus musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 14 12 At3g28240 hypothetical protein 97% similarity to At5g10670 (Arabidopsis thaliana); + 2 3 14 13 At3g28310 "expressed protein similar to At14a (TIGR_Ath1:At3g28290, TIGR_Ath1:At3g28300) [Arabidopsis thaliana]" 2 3 14 14 At3g28480 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 3 14 15 At3g28540 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 3 14 16 At3g28715 "H+-transporting two-sector ATPase, putative similar to SP|P54641 Vacuolar ATP synthase subunit d (EC 3.6.3.14) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) {Dictyostelium discoideum}; contains Pfam profile PF01992: ATP synthase (C/AC39) subunit" 2 3 14 17 At3g28770 expressed protein 2 3 14 18 At3g28930 avrRpt2-induced AIG2 protein (AIG2) identical to SP|P54121 AIG2 protein (avrRpt2-induced gene) {Arabidopsis thaliana} 2 3 14 19 At3g28970 expressed protein contains Pfam domain PF03556: Domain of unknown function (DUF298) 2 3 14 20 At3g42780 "hypothetical protein hypothetical protein MZB10.16 - Arabidopsis thaliana, EMBL:AC009326" 2 3 14 21 At3g42830 "ring-box protein Roc1/Rbx1/Hrt1, putative E3 ubiquitin ligase, SCF complex subunit; contains similarity to ring-box protein 1 RBX1 GI:4769004 from [Homo sapiens]" 2 3 14 22 At3g43153 "cAMP-dependent protein kinase inhibitor-related contains weak similarity to Swiss-Prot:P27776 cAMP-dependent protein kinase inhibitor, alpha form (PKI-alpha) (cAMP- dependent protein kinase inhibitor, muscle/brain isoform) [Rattus norvegicus]" 2 3 14 23 At3g43220 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to SAC domain protein 3 (SAC3) GI:31415722" 2 3 14 24 At3g43420 "hypothetical protein hypothetical protein q3037.6 - Oryza sativa, EMBL:OSA245900" 2 3 14 25 At3g43480 "hypothetical protein hypothetical protein At2g15180 - Arabidopsis thaliana, EMBL:AC006298" 2 3 15 1 At3g43670 "copper amine oxidase, putative similar to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855" 2 3 15 2 At3g43720 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 15 3 At3g46670 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 15 4 At3g46730 "disease resistance protein (CC-NBS class), putative domain signature CC-NBS exists, suggestive of a disease resistance protein." 2 3 15 5 At3g46910 hypothetical protein 2 3 15 6 At3g46970 "starch phosphorylase, putative similar to alpha-glucan phosphorylase, H isozyme SP:P32811 from [Solanum tuberosum]" 2 3 15 7 At3g47150 "F-box family protein various predicted proteins, Arabidopsis thaliana" 2 3 15 8 At3g47210 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 3 15 9 At3g47360 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 2 3 15 10 At3g47400 "pectinesterase family protein similar to pectinesterase (EC 3.1.1.11) from Vitis vinifera GI:15081598, Lycopersicon esculentum SP|Q43143 SP|P14280; contains Pfam profile PF01095 pectinesterase" 2 3 15 11 At3g50210 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 2 3 15 12 At3g50260 "AP2 domain-containing transcription factor, putative EREBP-3 homolog, Stylosanthes hamata, EMBL:U91982" 2 3 15 13 At3g50430 expressed protein 2 3 15 14 At3g50500 "protein kinase, putative similar to abscisic acid-activated protein kinase [Vicia faba] gi|6739629|gb|AAF27340" 2 3 15 15 At3g50670 U1 small nuclear ribonucleoprotein 70 (U1-70k) 2 3 15 16 At3g50720 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 2 3 15 17 At3g50900 expressed protein 2 3 15 18 At3g50960 expressed protein 2 3 15 19 At3g53500 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 2 3 15 20 At3g53560 chloroplast lumen common family protein 2 3 15 21 At3g53730 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 3 15 22 At3g53770 late embryogenesis abundant protein-related / LEA protein-related contains weak similarity to Swiss-Prot:P46521 late embryogenesis abundant protein Lea5-A [Gossypium hirsutum] 2 3 15 23 At3g53910 malate dehydrogenase-related similar to malate dehydrogenase precursor [Medicago sativa] GI:2827084 2 3 15 24 At3g53970 proteasome inhibitor-related similar to proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from [Homo sapiens] 2 3 15 25 At3g54090 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 3 16 1 At3g54150 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 2 3 16 2 At3g56920 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 2 3 16 3 At3g56980 basic helix-loop-helix (bHLH) family protein 2 3 16 4 At3g57160 expressed protein 2 3 16 5 At3g57220 "UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative strong similarity to GI:5804772" 2 3 16 6 At3g57380 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 2 3 16 7 At3g57420 "expressed protein contains Pfam domain PF03385: Protein of unknown function, DUF288" 2 3 16 8 At3g57590 F-box family protein contains F-box domain Pfam:PF00646 2 3 16 9 At3g57650 "acyl-CoA:1-acylglycerol-3-phosphate acyltransferase, putative similar to acyl-CoA:1-acylglycerol-3-phosphate acyltransferase GI:4583544 from [Brassica napus]" 2 3 16 10 At3g60410 expressed protein 2 3 16 11 At3g60460 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 2 3 16 12 At3g60620 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 2 3 16 13 At3g60680 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 2 3 16 14 At3g60840 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 2 3 16 15 At3g60900 fasciclin-like arabinogalactan-protein (FLA10) 2 3 16 16 At3g61080 fructosamine kinase family protein contains Pfam PF03881: Fructosamine kinase 2 3 16 17 At3g61140 "COP9 signalosome complex subunit 1 / CSN complex subunit 1 (CSN1) / COP11 protein (COP11) / FUSCA protein (FUS6) FUSCA6, COP11, CSN1; identical to FUS6 GI:432446, SP:P45432 from [Arabidopsis thaliana]; contains Pfam profile PF01399: PCI domain; identical to cDNA CSN complex subunit 1 (CSN1) GI:18056652" 2 3 16 18 At4g00240 "phospholipase D beta 2 / PLD beta 2 (PLDBETA2) / PLDdelta1 identical to SP|O23078 Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta 2) (PLDdelta1) [Arabidopsis thaliana]; contains Pfam profiles: PF00614 phospholipase D.active site motif, PF00168 C2 domain" 2 3 16 19 At4g00300 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 3 16 20 At4g00400 phospholipid/glycerol acyltransferase family protein 2 3 16 21 At4g00430 "plasma membrane intrinsic protein, putative identical to transmembrane protein GI:535780 from [Arabidopsis thaliana]; very strong similarity to SP|Q08733 Plasma membrane intrinsic protein 1C (Transmembrane protein B) (TMP-B) {Arabidopsis thaliana}; contains Pfam profile PF00230: Major intrinsic protein;" 2 3 16 22 At4g00560 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] 2 3 16 23 At4g00600 "tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P09440 C-1-tetrahydrofolate synthase, mitochondrial precursor (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3) {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" 2 3 16 24 At4g00750 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 3 16 25 At4g00770 expressed protein 2 3 17 1 At4g03270 "cyclin family protein similar to CycD3;2 [Lycopersicon esculentum] GI:6434199 ; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 3 17 2 At4g03300 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886" 2 3 17 3 At4g03450 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 2 3 17 4 At4g03510 zinc finger (C3HC4-type RING finger) family protein (RMA1) identical to RING zinc finger protein RMA1 gi:3164222 2 3 17 5 At4g03680 hypothetical protein 2 3 17 6 At4g03890 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 3 17 7 At4g04090 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 2 3 17 8 At4g04190 expressed protein 2 3 17 9 At4g08874 hypothetical protein 2 3 17 10 At4g08910 expressed protein 2 3 17 11 At4g09110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 17 12 At4g09170 expressed protein ; expression supported by MPSS 2 3 17 13 At4g09400 "hypothetical protein similar to At3g45350, At2g14330" 2 3 17 14 At4g09470 hypothetical protein 2 3 17 15 At4g09630 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 2 3 17 16 At4g09690 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 3 17 17 At4g12440 "adenine phosphoribosyltransferase, putative strong similarity to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 2 3 17 18 At4g12490 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 3 17 19 At4g12680 expressed protein ; expression supported by MPSS 2 3 17 20 At4g12730 fasciclin-like arabinogalactan-protein (FLA2) identical to gi_13377778_gb_AAK20858 2 3 17 21 At4g12890 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 2 3 17 22 At4g12950 hypothetical protein 2 3 17 23 At4g13110 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 3 17 24 At4g13180 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain type dehydrogenase/reductase SP:Q08632 [Picea abies] 2 3 17 25 At4g15520 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P19396 tRNA (Guanosine-2'-O-)-methyltransferase (EC 2.1.1.34) {Escherichia coli O157:H7}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family; contains non_consensus donor splice site TA at exon 4" 2 3 18 1 At4g15563 expressed protein ; expression supported by MPSS 2 3 18 2 At4g15750 invertase/pectin methylesterase inhibitor family protein nearly identical to gi:3426058 novel gene of unknown function; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor; identical to cDNA IB1P8-4 protein GI:3426057 2 3 18 3 At4g15790 expressed protein 2 3 18 4 At4g15955 epoxide hydrolase-related similar to epoxide hydrolase GI:1109600 from [Arabidopsis thaliana] 2 3 18 5 At4g16000 expressed protein 2 3 18 6 At4g16144 expressed protein 2 3 18 7 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 2 3 18 8 At4g18660 hypothetical protein weak similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423 2 3 18 9 At4g18720 transcription elongation factor-related contains weak similarity to transcription elongation factors 2 3 18 10 At4g18880 heat shock transcription factor 21 (HSF21) identical to heat shock transcription factor 21 [Arabidopsis thaliana] GI:3399765; contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 3 18 11 At4g18930 cyclic phosphodiesterase identical to cyclic phosphodiesterase [Arabidopsis thaliana] gi|2065013|emb|CAA72363 2 3 18 12 At4g19060 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 2 3 18 13 At4g19110 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 2 3 18 14 At4g19230 "cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_" 2 3 18 15 At4g19290 hypothetical protein 2 3 18 16 At4g22160 expressed protein 2 3 18 17 At4g22200 "potassium channel protein 2 (AKT2) (AKT3) identical to potassium channel [Arabidopsis thaliana] gi|1100898|gb|AAA97865; Note: also identical to AKT3 [Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is a truncated version of AKT2, PMID:10852932; member of the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+ channel family, PMID:11500563; identical to cDNA inward-rectifying K+ channel (AKT3) GI:1172219" 2 3 18 18 At4g22300 phospholipase/carboxylesterase family protein similar to acyl-protein thioesterase-1 [Homo sapiens] GI:9965372; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 2 3 18 19 At4g22340 "phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative similar to CDP-diacylglycerol synthetase (CDS) GI:2181182 from [Arabidopsis thaliana]" 2 3 18 20 At4g22540 "oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 2 3 18 21 At4g22590 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPA) GI:2944178; contains Pfam profile PF02358: Trehalose-phosphatase" 2 3 18 22 At4g22750 zinc finger (DHHC type) family protein contains DHHC zinc finger domain PF01529 2 3 18 23 At4g22790 MATE efflux family protein contains Pfam profile PF01554: Uncharacterized membrane protein family 2 3 18 24 At4g25370 Clp amino terminal domain-containing protein contains Pfam profile: PF02861 Clp amino terminal domain 2 3 18 25 At4g25410 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 19 1 At4g25560 myb family transcription factor (MYB18) contains PFAM profile: Myb DNA binding domain PF00249 2 3 19 2 At4g25620 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family member At5g52430 [Arabidopsis thaliana];" 2 3 19 3 At4g25780 "pathogenesis-related protein, putative similar to gene PR-1 protein - Medicago truncatula, SP|Q40374; contains Pfam profile PF00188: SCP-like extracellular protein" 2 3 19 4 At4g25835 AAA-type ATPase family protein contains Pfam profile: PF00004 ATPase family 2 3 19 5 At4g25990 expressed protein 2 3 19 6 At4g26050 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeat domains; 2 3 19 7 At4g28550 RabGAP/TBC domain-containing protein similar to SP|P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains Pfam profile PF00566: TBC domain 2 3 19 8 At4g28610 "myb family transcription factor, putative / phosphate starvation response regulator, putative (PHR1) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA phosphate starvation response regulator 1 (phr1 gene) GI:15384675" 2 3 19 9 At4g28750 "photosystem I reaction center subunit IV, chloroplast, putative / PSI-E, putative (PSAE1) identical to SP|Q9S831; similar to SP|P12354 Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) {Spinacia oleracea}; contains Pfam profile PF02427: Photosystem I reaction centre subunit IV / PsaE" 2 3 19 10 At4g28810 "expressed protein PMID: 12679534, putative bHLH127 transcription factor" 2 3 19 11 At4g28990 RNA-binding protein-related contains weak similarity to Swiss-Prot:Q01844 RNA-binding protein EWS (EWS oncogene)(Ewing sarcoma breakpoint region 1 protein) [Homo sapiens] 2 3 19 12 At4g29050 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 2 3 19 13 At4g29210 gamma-glutamyltranspeptidase family protein similar to SP|P07314 Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 2 3 19 14 At4g29250 "transferase family protein low similarity to CER2 Arabidopsis thaliana GI:1213594, anthocyanin 5-aromatic acyltransferase Gentiana triflora GI:4185599; contains Pfam profile PF02458 transferase family" 2 3 19 15 At4g31800 WRKY family transcription factor 2 3 19 16 At4g31850 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 19 17 At4g31990 "aspartate aminotransferase, chloroplast / transaminase A (ASP5) (AAT1) nearly identical to SP|P46248 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}" 2 3 19 18 At4g32030 expressed protein 2 3 19 19 At4g32190 centromeric protein-related low similarity to SP|Q02224 Centromeric protein E (CENP-E protein) {Homo sapiens} 2 3 19 20 At4g32270 UDP-sugar transporter-related contains weak similarity to Swiss-Prot:Q95YI5 UDP-sugar transporter UST74c [Drosophila melanogaster] 2 3 19 21 At4g32430 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 19 22 At4g32460 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 2 3 19 23 AT5G57480 PC-1 C11 2 3 19 24 3XSSC PC-1 C23 2 3 19 25 AT1G29930 PC-1 G11 2 3 20 1 3XSSC PC-1 G23 2 3 20 2 AT3G44150 PC-1 K11 2 3 20 3 3XSSC PC-1 K23 2 3 20 4 AT4G00810 PC-1 O11 2 3 20 5 3XSSC PC-1 O23 2 3 20 6 At4g35040 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 2 3 20 7 At4g35080 "high-affinity nickel-transport family protein contains Pfam domain, PF03824: High-affinity nickel-transport protein" 2 3 20 8 At4g35240 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 2 3 20 9 At4g35295 "homoserine kinase, putative / HSK, putative similar to homoserine kinase [Arabidopsis thaliana] GI:4927412" 2 3 20 10 At4g35420 "dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family similar to dihydroflavonol 4-reductase (Rosa hybrid cultivar, GI:1332411), CPRD14 protein (Vigna unguiculata, GI:1854445)" 2 3 20 11 At4g35480 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 20 12 At4g35640 "serine O-acetyltransferase, putative similar to serine acetyltransferase, Arabidopsis thaliana, GI:905391; contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats)" 2 3 20 13 At4g35700 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 20 14 At4g38310 galactosyl transferase GMA12/MNN10 family protein other predicted proteins Arabidopsis thaliana 2 3 20 15 At4g38370 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 2 3 20 16 At4g38550 expressed protein 2 3 20 17 At4g38600 HECT-domain-containing protein / ubiquitin-transferase family protein similar to SP|Q14669Thyroid receptor interacting protein 12 (TRIP12) {Homo sapiens}; contains Pfam profile PF00632: HECT-domain (ubiquitin-transferase) 2 3 20 18 At4g38790 ER lumen protein retaining receptor family protein similar to SP|P35402 ER lumen protein retaining receptor (HDEL receptor) {Arabidopsis thaliana}; contains Pfam profile PF00810: ER lumen protein retaining receptor 2 3 20 19 At4g38840 "auxin-responsive protein, putative auxin-inducible SAUR gene, Raphanus sativus,AB000708" 2 3 20 20 At4g38970 "fructose-bisphosphate aldolase, putative strong similarity to plastidic fructose-bisphosphate aldolase (EC 4.1.2.13) from Nicotiana paniculata (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057 [SP|Q40677]" 2 3 20 21 At4g39020 SH3 domain-containing protein similar to SH3 domain-containing protein 2 [Arabidopsis thaliana] GI:16974678; contains Pfam profile PF00018: SH3 domain 2 3 20 22 At5g02470 "DP-2 transcription factor, putative (DPA) similar to Swiss-Prot:Q14188 transcription factor DP-2 (E2F dimerization partner 2) [Homo sapiens]" 2 3 20 23 At5g02502 expressed protein 8113. 2 3 20 24 At5g02640 "expressed protein predicted proteins, Arabidopsis thaliana and Oryza sativa" 2 3 20 25 At5g02700 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 2 3 21 1 At5g02840 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 2 3 21 2 At5g02900 "cytochrome P450, putative cytochrome P450 homolog, Arabidopsis thaliana, PIR:T09367" 2 3 21 3 At5g03080 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 2 3 21 4 At5g03140 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 2 3 21 5 At5g05800 expressed protein 2 3 21 6 At5g05860 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 21 7 At5g06000 "eukaryotic translation initiation factor 3G, putative / eIF3g, putative similar to eukaryotic translation initiation factor 3g [Arabidopsis thaliana] GI:12407751; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 3 21 8 At5g06060 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 3 21 9 At5g06190 expressed protein 2 3 21 10 At5g06240 expressed protein 2 3 21 11 At5g06400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 21 12 At5g06440 expressed protein similar to unknown protein (gb|AAF23188.1) 2 3 21 13 At5g09540 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 2 3 21 14 At5g09600 succinate dehydrogenase cytochrome b subunit family protein similar to succinate dehydrogenase subunit 3 [Gossypium hirsutum] GI:14861484; contains Pfam profile PF01127: Succinate dehydrogenase cytochrome b subunit 2 3 21 15 At5g09770 ribosomal protein L17 family protein contains Pfam profile: PF01196 ribosomal protein L17 2 3 21 16 At5g09830 BolA-like family protein contains Pfam profile: PF01722 BolA-like protein 2 3 21 17 At5g09990 expressed protein 2 3 21 18 At5g10020 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase ERECTA, Arabidopsis thaliana, EMBL:AC004484" 2 3 21 19 At5g10180 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:2114104 2 3 21 20 At5g10240 asparagine synthetase 3 (ASN3) identical to asparagine synthetase (ASN3) [Arabidopsis thaliana] GI:3859534 2 3 21 21 At5g13360 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 2 3 21 22 At5g13420 "transaldolase, putative similar to transaldolase [Solanum tuberosum] gi|2078350|gb|AAB54016" 2 3 21 23 At5g13560 expressed protein weak similarity to SP|O42184 Restin (Cytoplasmic linker protein-170) (CLIP-170) {Gallus gallus} 2 3 21 24 At5g13620 expressed protein ; expression supported by MPSS 2 3 21 25 At5g13780 "GCN5-related N-acetyltransferase, putative similar to SP|P07347 N-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 22 1 At5g13830 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 2 3 22 2 At5g14000 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 2 3 22 3 At5g14060 "aspartate kinase, lysine-sensitive nearly identical to gi:2257743" 2 3 22 4 At5g16800 "GCN5-related N-acetyltransferase (GNAT) family protein very low similarity to SP|P39909 Spermine/spermidine acetyltransferase (EC 2.3.1.57) {Bacillus subtilis}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 22 5 At5g16840 RNA recognition motif (RRM)-containing protein predicted proteins - Arabidopsis thaliana 2 3 22 6 At5g17010 sugar transporter family protein similar to D-xylose proton-symporter [Lactobacillus brevis] GI:2895856; contains Pfam profile PF00083: major facilitator superfamily protein 2 3 22 7 At5g17060 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster)" 2 3 22 8 At5g17220 "glutathione S-transferase, putative " 2 3 22 9 At5g17280 expressed protein similar to unknown protein (pir||T41692) 2 3 22 10 At5g17450 "heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403" 2 3 22 11 At5g17490 "gibberellin response modulator, putative / gibberellin-responsive modulator, putative putative member of the VHIID domain transcription factor family RGAL - Arabidopsis thaliana, EMBL:AJ224957" 2 3 22 12 At5g20050 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 22 13 At5g20110 "dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 2 3 22 14 At5g20260 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 3 22 15 At5g20320 "DEAD/DEAH box helicase, putative similar to CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF03368: Domain of unknown function, PF00636: RNase3 domain, PF00035: Double-stranded RNA binding motif" 2 3 22 16 At5g20500 "glutaredoxin, putative similar to glutaredoxin [Populus tremula x Populus tremuloides] gi|19548658|gb|AAL90750" 2 3 22 17 At5g20570 ring-box protein-related similar to ring-box protein 1 GI:4769004 from [Homo sapiens] 2 3 22 18 At5g20720 "20 kDa chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20) identical to chloroplast 20 kDa chaperonin, chloroplast precursor (Protein Cpn21), chloroplast protein Cpn10, chloroplast chaperonin 10 (Ch-CPN10), SP|O65282 from [Arabidopsis thaliana]; identical to cDNA chaperonin 20 GI:14587372" 2 3 22 19 At5g20740 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 3 22 20 At5g24080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 22 21 At5g24130 expressed protein 2 3 22 22 At5g24290 integral membrane family protein contains Pfam domain PF01988: Integral membrane protein 2 3 22 23 At5g24314 expressed protein 2 3 22 24 At5g24450 transcription factor-related low similarity to transcription factor IIIC63 [Homo sapiens] GI:5281316 2 3 22 25 At5g24510 "60s acidic ribosomal protein P1, putative " 2 3 23 1 At5g24660 expressed protein 2 3 23 2 At5g24750 expressed protein 2 3 23 3 At5g27660 "DegP protease, putative similar to Serine protease HTRA2, mitochondrial precursor (High temperature requirement protein A2) (HtrA2) (Omi stress-regulated endoprotease) (Serine proteinase OMI) (SP:O43464) {Homo sapiens}" 2 3 23 4 At5g27720 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to SWISS-PROT:Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 [Mus musculus]" 2 3 23 5 At5g27880 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 23 6 At5g27940 "MFP1 attachment factor, putative similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659 similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659" 2 3 23 7 At5g28120 hypothetical protein 2 3 23 8 At5g28180 kelch repeat-containing F-box family protein contains Pfam PF01344: Kelch motif; contains Pfam PF00646: F-box domain 2 3 23 9 At5g28370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 23 10 At5g28430 hypothetical protein 2 3 23 11 At5g36700 "phosphoglycolate phosphatase, putative similar to phosphoglycolate phosphatase precursor [Chlamydomonas reinhardtii] GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 23 12 At5g36740 PHD finger family protein 2 3 23 13 At5g36950 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 2 3 23 14 At5g37020 auxin-responsive factor (ARF8) identical to auxin response factor 8 GI:4104931 from [Arabidopsis thaliana] 2 3 23 15 At5g37180 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative similar to sucrose synthase GI:6682841 from [Citrus unshiu]" 2 3 23 16 At5g37240 hypothetical protein 2 3 23 17 At5g37400 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 2 3 23 18 At5g37450 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 23 19 At5g40340 "PWWP domain-containing protein KED, Nicotiana tabacum, EMBL:AB009883" 2 3 23 20 At5g40400 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 2 3 23 21 At5g40560 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 2 3 23 22 At5g40595 hypothetical protein 2 3 23 23 At5g40760 glucose-6-phosphate 1-dehydrogenase / G6PD (ACG12) idential to glucose-6-phosphate 1-dehydrogenase (acg12) [Arabidopsis thaliana] GI:5732197 2 3 23 24 At5g40820 "FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein similar to Atr protein [Xenopus laevis] GI:11385422; contains Pfam profiles PF00454 Phosphatidylinositol 3- and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain" 2 3 23 25 At5g40990 GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 2 3 24 1 At5g41050 expressed protein 2 3 24 2 At5g43730 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 24 3 At5g43780 sulfate adenylyltransferase 4 / ATP-sulfurylase 4 (APS4) identical to ATP sulfurylase precursor (APS4) [Arabidopsis thaliana] GI:4633131 2 3 24 4 At5g43950 expressed protein 2 3 24 5 At5g43990 "SET domain-containing protein identical to SET domain protein SUVR2 [Arabidopsis thaliana] GI:15290521; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA SET domain protein SUVR2 GI:15290520" 2 3 24 6 At5g44150 expressed protein 2 3 24 7 At5g44210 ERF domain protein 9 (ERF9) identical to ERF domain protein 9 GI:11414988 from [Arabidopsis thaliana] 2 3 24 8 At5g44345 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 3 24 9 At5g44400 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 2 3 24 10 At5g46930 "invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 3 24 11 At5g46990 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 3 24 12 At5g47150 YDG/SRA domain-containing protein low similarity to nuclear protein np95 [Mus musculus] GI:4220590; contains Pfam profile PF02182: YDG/SRA domain 2 3 24 13 At5g47200 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303750 from [Pisum sativum]" 2 3 24 14 At5g47370 "homeobox-leucine zipper protein 2 (HAT2) / HD-ZIP protein 2 identical to homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) [Arabidopsis thaliana] SP:P46601; contains Pfam profiles PF04618: HD-ZIP protein N terminus, PF02183: Homeobox associated leucine zipper, PF00046: Homeobox domain" 2 3 24 15 At5g47430 expressed protein 2 3 24 16 At5g47530 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 (GI:11357190) [Arabidopsis thaliana]; similar to stromal cell derived factor receptor 2 (GI:20381292) [Mus musculus]" 2 3 24 17 At5g47590 heat shock protein-related contains similarity to mitochondrial small heat shock protein [Lycopersicon esculentum] gi|3492854|dbj|BAA32547 2 3 24 18 At5g50220 F-box family protein contains F-box domain Pfam:PF00646 2 3 24 19 At5g50280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 24 20 At5g50440 Golgi SNARE protein membrin 12 (MEMB12) identical to Membrin 12 (AtMEMB12) (Golgi SNAP receptor complex member 2-2) (GI:27805575)(SP:Q9FK28) {Arabidopsis thaliana}; similar to Probable 27 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 2) (SP:Q9SJL6) [Arabidopsis thaliana] 2 3 24 21 At5g50500 hypothetical protein 2 3 24 22 At5g50680 SUMO activating enzyme 1b (SAE1b) identical to SUMO activating enzyme 1b [Arabidopsis thaliana] GI:22652852; nearly identical to At5g50580; contains Pfam profile PF00899: ThiF family 2 3 24 23 At5g50760 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 2 3 24 24 At5g50915 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 24 25 At5g50970 "WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat" 2 3 25 1 At5g53720 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 3 25 2 At5g53780 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 3 25 3 At5g53910 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 3 25 4 At5g53970 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 2 3 25 5 At5g54110 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 2 3 25 6 At5g54160 "quercetin 3-O-methyltransferase 1 / flavonol 3-O-methyltransferase 1 / caffeic acid/5-hydroxyferulic acid O-methyltransferase (OMT1) identical to O-methyltransferase 1 [Arabidopsis thaliana][GI:2781394], SP|Q9FK25 Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1) (Flavonol 3- O-methyltransferase 1) (Caffeic acid/5-hydroxyferulic acid O- methyltransferase) {Arabidopsis thaliana}" 2 3 25 7 At5g54340 "zinc finger (C2H2 type) protein-related contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 25 8 At5g54400 expressed protein 2 3 25 9 At5g57090 auxin transport protein (EIR1) identical to auxin transport protein EIR1 [Arabidopsis thaliana] gi|3377507|gb|AAC39513; identical to root gravitropism control protein [Arabidopsis thaliana] gi|4322486|gb|AAD16060 2 3 25 10 At5g57140 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 Calcineurin-like phosphoesterase 2 3 25 11 At5g57280 expressed protein 2 3 25 12 At5g57340 expressed protein 2 3 25 13 At5g57490 "porin, putative similar to 36kDA porin II [Solanum tuberosum] GI:515360; contains Pfam profile PF01459: Eukaryotic porin" 2 3 25 14 At5g57550 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR3) identical to endoxyloglucan transferase GI:5533317 from [Arabidopsis thaliana] 2 3 25 15 At5g57680 expressed protein 2 3 25 16 At5g57730 hypothetical protein 2 3 25 17 At5g60290 hypothetical protein 2 3 25 18 At5g60350 hypothetical protein 2 3 25 19 At5g60490 fasciclin-like arabinogalactan-protein (FLA12) 2 3 25 20 At5g60550 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 25 21 At5g60680 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 2 3 25 22 At5g60740 "ABC transporter family protein similar to ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) SP:Q9UNQ0 from [Homo sapiens]" 2 3 25 23 At5g60900 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 2 3 25 24 At5g60960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 25 25 At5g63650 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK2[Arabidopsis thaliana], SWISS-PROT:P43292; contains protein kinase domain, Pfam:PF00069" 2 3 26 1 At5g63710 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 26 2 At5g63890 "histidinol dehydrogenase, putative / HDH, putative strong similarity to SP|P24226 Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) {Brassica oleracea var.capitata}; contains Pfam profile PF00815: histidinol dehydrogenase" 2 3 26 3 At5g63930 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 26 4 At5g64080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 26 5 At5g64140 40S ribosomal protein S28 (RPS28C) 2 3 26 6 At5g64280 "oxoglutarate/malate translocator, putative similar to SWISS-PROT:Q41364 2-oxoglutarate/malate translocator, chloroplast precursor [Spinach]{Spinacia oleracea}" 2 3 26 7 At5g64340 expressed protein 2 3 26 8 At5g66740 hypothetical protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 2 3 26 9 At5g66800 expressed protein 2 3 26 10 At5g66950 expressed protein 2 3 26 11 At5g67000 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.2 (GI:2281629) {Arabidopsis thaliana}" 2 3 26 12 At5g67170 "SEC-C motif-containing protein / OTU-like cysteine protease family protein contains Pfam profiles PF02338: OTU-like cysteine protease, PF02810: SEC-C motif" 2 3 26 13 At5g67210 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 2 3 26 14 At5g67380 "casein kinase II alpha chain 1 identical to casein kinase II, alpha chain 1 (CK II) [Arabidopsis thaliana] SWISS-PROT:Q08467; contains protein kinase domain, Pfam:PF00069" 2 3 26 15 At5g67430 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 26 16 At3g42780 "hypothetical protein hypothetical protein MZB10.16 - Arabidopsis thaliana, EMBL:AC009326" 2 3 26 17 At3g42830 "ring-box protein Roc1/Rbx1/Hrt1, putative E3 ubiquitin ligase, SCF complex subunit; contains similarity to ring-box protein 1 RBX1 GI:4769004 from [Homo sapiens]" 2 3 26 18 At3g43153 "cAMP-dependent protein kinase inhibitor-related contains weak similarity to Swiss-Prot:P27776 cAMP-dependent protein kinase inhibitor, alpha form (PKI-alpha) (cAMP- dependent protein kinase inhibitor, muscle/brain isoform) [Rattus norvegicus]" 2 3 26 19 At3g43220 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to SAC domain protein 3 (SAC3) GI:31415722" 2 3 26 20 At3g43420 "hypothetical protein hypothetical protein q3037.6 - Oryza sativa, EMBL:OSA245900" 2 3 26 21 At3g43480 "hypothetical protein hypothetical protein At2g15180 - Arabidopsis thaliana, EMBL:AC006298" 2 3 26 22 At3g43670 "copper amine oxidase, putative similar to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855" 2 3 26 23 At3g43720 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 26 24 Blank Blank 2 3 26 25 Blank Blank 2 4 1 1 atc05 Randomly generated negative control 2 4 1 2 atc11 Randomly generated negative control 2 4 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 2 4 1 4 atc01 Randomly generated negative control 2 4 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 2 4 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 4 1 7 atc09 Randomly generated negative control 2 4 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 2 4 1 9 At1g03620 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 4 1 10 At1g03687 DTW domain-containing protein contains Pfam PF03942: DTW domain 2 4 1 11 At1g03830 "guanylate-binding family protein contains Pfam domains PF02263: Guanylate-binding protein, N-terminal domain and PF02841: Guanylate-binding protein, C-terminal domain" 2 4 1 12 At1g03860 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 4 1 13 At1g04010 lecithin:cholesterol acyltransferase family protein / LACT family protein weak similarity to SP|P40345 Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158) (PDAT) {Saccharomyces cerevisiae}; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 2 4 1 14 At1g04070 expressed protein Contains similarity to hypothetical mitochondrial import receptor subunit gb Z98597 from S. pombe. ESTs gb|T45575 and gb|Z26435 and gb|AA394576 come from this gene 2 4 1 15 At1g04230 expressed protein 2 4 1 16 At1g04290 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein; EST gb|T45093 comes from this gene 2 4 1 17 At1g06950 chloroplast inner envelope protein-related similar to chloroplast inner envelope protein GI:1495767 from [Pisum sativum] 2 4 1 18 At1g06990 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 2 4 1 19 At1g07160 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GI:2582800 from [Medicago sativa]" 2 4 1 20 At1g07220 expressed protein 2 4 1 21 At1g07360 "zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein similar to SP|O59800 Cell cycle control protein cwf5 {Schizosaccharomyces pombe}, RNA Binding Protein 47 [Nicotiana plumbaginifolia] GI:9663769; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 2 4 1 22 At1g07420 sterol 4-alpha-methyl-oxidase 2 (SMO2) identical to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase GI:16973470 2 4 1 23 At1g07540 "telomere-binding protein, putative similar to telomere binding protein TBP1 [Nicotiana glutinosa] gi|23664357|gb|AAN39330" 2 4 1 24 At1g07600 metallothionein-like protein 1A (MT-1A) (MT-Q) (MT-2) identical to Metallothionein-like protein 1A (MT-1A) (MT-Q) (MT-2) SP:P43392 from (Arabidopsis thaliana) 2 4 1 25 At1g10060 "branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1) nearly identical to SP|Q93Y32 Branched-chain amino acid aminotransferase 1, mitochondrial precursor (EC 2.6.1.42) (Atbcat-1) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 2 4 2 1 At1g10120 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 2 4 2 2 At1g10310 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 2 4 2 3 At1g10350 "DNAJ heat shock protein, putative similar to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 2 4 2 4 At1g10520 DNA polymerase lambda (POLL) identical to DNA polymerase lambda GI:12053869 from [Arabidopsis thaliana] 2 4 2 5 At1g10570 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to EST gb|N96456" 2 4 2 6 At1g10670 expressed protein 2 4 2 7 At1g10720 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 4 2 8 At1g13420 sulfotransferase family protein similar to steroid sulfotransferase 1 GI:3420004 from (Brassica napus); contains Pfam profile PF00685: Sulfotransferase domain 2 4 2 9 At1g13480 hypothetical protein 2 4 2 10 At1g13640 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 2 4 2 11 At1g13710 cytochrome P450 family protein similar to cytochrome P450 78A1 (SP:P48420) GI:349717 from [Zea mays] 2 4 2 12 At1g13920 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 2 4 2 13 At1g13960 WRKY family transcription factor similar to WKRY DNA-binding protein GB:AAD17441 2 4 2 14 At1g14150 oxygen evolving enhancer 3 (PsbQ) family protein extrinsic pII protein; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ) 2 4 2 15 At1g14200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 2 16 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related similar to Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (SP:O23654) [Arabidopsis thaliana] 2 4 2 17 At1g16850 expressed protein 2 4 2 18 At1g17000 "alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325, GI:4468259 from (Pichia angusta); contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 2 4 2 19 At1g17060 "cytochrome P450, putative 41% identical to Cytochrome P450 [Catharanthus roseus] (gi|404690)" 2 4 2 20 At1g17230 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 4 2 21 At1g17285 expressed protein 2 4 2 22 At1g17455 expressed protein 2 4 2 23 At1g17510 expressed protein 2 4 2 24 At1g20430 expressed protein 2 4 2 25 At1g20470 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 2 4 3 1 At1g20620 "catalase 3 (SEN2) almost identical to catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis thaliana]; identical to catalase 3 (SEN2) mRNA, partial cds GI:3158369" 2 4 3 2 At1g20670 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 4 3 3 At1g20816 expressed protein 2 4 3 4 At1g20870 expressed protein 2 4 3 5 At1g21050 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 2 4 3 6 At1g21100 "O-methyltransferase, putative similar to GI:2781394" 2 4 3 7 At1g23770 F-box family protein contains Pfam PF00646: F-box domain; similar to F-box only protein 7 (SP:Q9Y3I1) {Homo sapiens} ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 3 8 At1g23820 spermidine synthase 1 (SPDSYN1) / putrescine aminopropyltransferase 1 identical to SP|Q9ZUB3 Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) {Arabidopsis thaliana} 2 4 3 9 At1g23960 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 2 4 3 10 At1g24010 expressed protein 2 4 3 11 At1g24170 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 2 4 3 12 At1g24230 paired amphipathic helix repeat-containing protein weak similarity to transcriptional co-repressor SIN3A [Drosophila melanogaster] GI:2570794; contains Pfam profile PF02671: Paired amphipathic helix repeat 2 4 3 13 At1g24360 "3-oxoacyl-[acyl-carrier protein] reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase identical to 3-oxoacyl-[acyl-carrier protein] reductase SP:P33207 from [Arabidopsis thaliana]" 2 4 3 14 At1g24430 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase from Catharanthus roseus GI:4091808 GB:AAC99311, acetyl CoA: benzylalcohol acetyltransferase Clarkia breweri GI:3170250, acetyl-CoA:benzylalcohol acetyltranferase Clarkia concinna GI:6166328; contains Pfam profile PF02458 transferase family" 2 4 3 15 At1g28110 "serine carboxypeptidase S10 family protein similar to H.vulgare gene encoding serine carboxypeptidase II, CP-MII GI:1731989" 2 4 3 16 At1g28150 expressed protein 2 4 3 17 At1g28320 protease-related similar to Protease degS [Precursor] (SP:P44947) [Haemophilus influenzae]; similar to DegP protease precursor (GI:2565436) [Arabidopsis thaliana] 2 4 3 18 At1g28340 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to receptor-like protein kinases" 2 4 3 19 At1g28470 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM protein GI:6066594 from [Petunia hybrida] 2 4 3 20 At1g28530 expressed protein 2 4 3 21 At1g28660 "lipase, putative strong similarity to lipase [Arabidopsis thaliana] GI:1145627" 2 4 3 22 At1g28700 "expressed protein similar to GI:2827651,GP:10764853, GI:10764852, GI:7527728, GI:4406788, GI:6063544 [Arabidopsis thaliana]; expression supported by MPSS" 2 4 3 23 At1g31850 "dehydration-responsive protein, putative strong similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase" 2 4 3 24 At1g31920 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 3 25 At1g32120 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 4 4 1 At1g32180 "cellulose synthase family protein similar to cellulose synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays" 2 4 4 2 At1g32340 "zinc finger (C3HC4-type RING finger) family protein contains a Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 2 4 4 3 At1g32370 tobamovirus multiplication protein 2B (TOM2B) identical to tobamovirus multiplication 2B [Arabidopsis thaliana] gi|32698522|dbj|BAC24020; PMID: 12514139 2 4 4 4 At1g32500 "ATP-binding-cassette transporter, putative similar to ATP-binding-cassette transporter (ABC1) described in PMID:11156608" 2 4 4 5 At1g32540 "zinc finger protein, putative similar to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660" 2 4 4 6 At1g36240 60S ribosomal protein L30 (RPL30A) similar to GI:6984132 from [Euphorbia esula] 2 4 4 7 At1g36380 expressed protein similar to vanilloid receptor-like protein GB:AAD26363 from [Homo sapiens] 2 4 4 8 At1g36950 zinc finger protein-related contains similarity to zinc finger proteins (C3HC4-type RING finger) 2 4 4 9 At1g37010 hypothetical protein 2 4 4 10 At1g39350 hypothetical protein 2 4 4 11 At1g40129 hypothetical protein 2 4 4 12 At1g42250 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 2 4 4 13 At1g42460 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 4 4 14 At1g48350 ribosomal protein L18 family protein similar to ribosomal protein L18 GI:3980238 from [Thermotoga maritima] 2 4 4 15 At1g48405 hypothetical protein 2 4 4 16 At1g48580 expressed protein 2 4 4 17 At1g48610 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 2 4 4 18 At1g48780 hypothetical protein 2 4 4 19 At1g48840 expressed protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 2 4 4 20 At1g49015 eukaryotic translation initiation factor-related contains similarity to eukaryotic translation initiation factor 3 subunit 9 SP:Q9C5Z1 2 4 4 21 At1g49100 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 4 22 At1g52060 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 4 23 At1g52120 jacalin lectin family protein simiilar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 4 24 At1g52290 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 4 4 25 At1g52325 hypothetical protein 2 4 5 1 At1g52480 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 5 2 At1g52520 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 4 5 3 At1g52690 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P13934 Late embryogenesis abundant protein 76 (LEA 76) {Brassica napus}; contains Pfam profile PF02987: Late embryogenesis abundant protein" 2 4 5 4 At1g52740 "histone H2A, putative similar to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 4 5 5 At1g55370 expressed protein 2 4 5 6 At1g55440 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 5 7 At1g55570 multi-copper oxidase type I family protein nearly identical to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Multicopper oxidase domain PF00394 2 4 5 8 At1g55630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 5 9 At1g55790 hypothetical protein 2 4 5 10 At1g55840 "SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein similar to polyphosphoinositide binding protein SEC14 homolog Ssh1p (GB:AAB94598) [Glycine max]; identified in Eur J Biochem 1998 Dec 1;258(2):402-10 as AtSEC14, characterized by functional complementation in S. cerevisiae." 2 4 5 11 At1g55990 "glycine-rich protein predicted proteins, Arabidopsis thaliana" 2 4 5 12 At1g56030 "MIF4G domain-containing protein / U-box domain-containing protein low similarity to intermediate filament filarin [Hirudo medicinalis] GI:4761082; contains Pfam profiles PF02854: MIF4G domain, PF04564: U-box domain" 2 4 5 13 At1g60720 hypothetical protein 2 4 5 14 At1g60780 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 2 4 5 15 At1g60950 "ferredoxin, chloroplast (PETF) identical to FERREDOXIN PRECURSOR GB:P16972 [SP|P16972] from [Arabidopsis thaliana]" 2 4 5 16 At1g60990 glycine cleavage T family protein / aminomethyl transferase family protein contains Pfam profile: PF01571 glycine cleavage T-protein (aminomethyl transferase) 2 4 5 17 At1g61130 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II-3 precursor (SP:P52711) (CP-MII.3. [Hordeum vulgare] 2 4 5 18 At1g61190 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 4 5 19 At1g61370 "S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding)" 2 4 5 20 At1g61430 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 2 4 5 21 At1g64180 intracellular protein transport protein USO1-related similar to Rap8 (GI:2326183) [Rhynchosciara americana]; contains weak similarity to Swiss-Prot:P25386 intracellular protein transport protein USO1 [Saccharomyces cerevisiae] 2 4 5 22 At1g64230 "ubiquitin-conjugating enzyme, putative identical or nearly so to Ubiquitin-conjugating enzymes SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 5 23 At1g64390 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-beta-1,4-glucanase GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol. 40, 323-332 (1999))" 2 4 5 24 At1g64450 "proline-rich family protein contains proline rich extensins, INTERPRO:IPR0002965" 2 4 5 25 At1g64625 expressed protein similar to cDNA bHLH transcription factor (bHLH epsilon gene) GI:32563003 2 4 6 1 At1g64680 expressed protein 2 4 6 2 At1g64850 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 2 4 6 3 At1g64910 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 4 6 4 At1g67700 expressed protein 2 4 6 5 At1g67750 pectate lyase family protein similar to pectate lyase GI:14289169 from [Salix gilgiana] 2 4 6 6 At1g67865 expressed protein 2 4 6 7 At1g67920 expressed protein 2 4 6 8 At1g68050 "F-box family protein (FKF1) / adagio 3 (ADO3) E3 ubiquitin ligase SCF complex F-box subunit; identical to FKF1 GI:6960305 and Adagio 3 GI:13487072 from [Arabidopsis thaliana]; contains Pfam profiles PF01344: Kelch motif, PF00785: PAC motif and PF00646: F-box domain; contains TIGRfam profile TIGR00229: PAS domain S-boxidentical to cDNA Adagio 3 (ADO3) GI:13487071" 2 4 6 9 At1g68110 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis]; contains Pfam profile: PF01417 ENTH domain, suggesting involvement in endocytosis or cytoskeletal machinery" 2 4 6 10 At1g68280 thioesterase-related contains domain similarity with PF03061: thioesterase family protein 2 4 6 11 At1g68340 expressed protein 2 4 6 12 At1g70990 proline-rich family protein 2 4 6 13 At1g71040 multi-copper oxidase type I family protein similar to SP|P07788 Spore coat protein A {Bacillus subtilis}; contains Pfam profile PF00394: Multicopper oxidase 2 4 6 14 At1g71220 "UDP-glucose:glycoprotein glucosyltransferase, putative similar to UDP-glucose:glycoprotein glucosyltransferase precursor GB:Q09332 [SP|Q09332] from Drosophila melanogaster, [gi:7670746] and [gi:11346464] from Homo sapiens" 2 4 6 15 At1g71270 Vps52/Sac2 family protein similar to SP|P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family 2 4 6 16 At1g71430 expressed protein 2 4 6 17 At1g71490 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 6 18 At1g71730 expressed protein 2 4 6 19 At1g71790 "F-actin capping protein beta subunit family protein contains Pfam profile: PF01115 F-actin capping protein, beta subunit" 2 4 6 20 At1g74530 expressed protein 2 4 6 21 At1g74580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 2 4 6 22 At1g74770 expressed protein 2 4 6 23 At1g74830 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 2 4 6 24 At1g75000 GNS1/SUR4 membrane family protein contains Pfam profile PF01151: GNS1/SUR4 family 2 4 6 25 At1g75060 expressed protein ; expression supported by MPSS 2 4 7 1 At1g75220 "integral membrane protein, putative strong similarity to integral membrane protein GI:1209756 from [Beta vulgaris]; contains Pfam profile PF00083: major facilitator superfamily protein" 2 4 7 2 At1g75270 "dehydroascorbate reductase, putative similar to GI:6939839 from [Oryza sativa]" 2 4 7 3 AT5G57480 PC-1 D11 2 4 7 4 3XSSC PC-1 D23 2 4 7 5 AT1G29930 PC-1 H11 2 4 7 6 3XSSC PC-1 H23 2 4 7 7 AT3G44150 PC-1 L11 2 4 7 8 3XSSC PC-1 L23 2 4 7 9 AT4G00810 PC-1 P11 2 4 7 10 3XSSC PC-1 P23 2 4 7 11 At1g78000 sulfate transporter (Sultr1;2) identical to sulfate transporter Sultr1;2 [Arabidopsis thaliana] GI:7768660; contaisn Pfam profiles PF00916: Sulfate transporter family and PF01740: STAS domain; contains TIGRfam profile TIGR00815: sulfate permease 2 4 7 12 At1g78060 glycosyl hydrolase family 3 protein similar to xylosidase GI:2102655 from [Aspergillus niger] 2 4 7 13 At1g78210 "hydrolase, alpha/beta fold family protein low similarity to hydrolases from Rhodococcus sp. EtbD2 GI:3273241, EtbD1 GI:3273239; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 4 7 14 At1g78260 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif-containing protein SEB-4 GI:8895698 from [Xenopus laevis]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 4 7 15 At1g78450 SOUL heme-binding family protein weak similarity to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 2 4 7 16 At1g78510 solanesyl diphosphate synthase (SPS) identical to solanesyl diphosphate synthase [Arabidopsis thaliana] GI:19911233; contains Pfam profile PF00348: Polyprenyl synthetase 2 4 7 17 At1g78660 "gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana}" 2 4 7 18 At1g78710 expressed protein similar to hypothetical protein GI:3201617 from [Arabidopsis thaliana]; expression supported by MPSS 2 4 7 19 At2g01270 "thioredoxin family protein low similarity to quiescin [Homo sapiens] GI:13257405; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 2 4 7 20 At2g01320 ABC transporter family protein 2 4 7 21 At2g01470 "St12p protein (ST12p) / SEC12p protein, putative 99.8% identical to St12p protein (GI:166878) {Arabidopsis thaliana}" 2 4 7 22 At2g01520 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:169000] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 2 4 7 23 At2g01690 expressed protein 2 4 7 24 At2g01740 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 7 25 At2g01910 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 2 4 8 1 At2g01950 "leucine-rich repeat transmembrane protein kinase, putative similar to brassinosteroid insensitive protein" 2 4 8 2 At2g05170 vacuolar protein sorting 11 family protein / VPS11 family protein similar to Vacuolar protein sorting 11 (hVPS11) (PP3476) (Swiss-Prot:Q9H270) [Homo sapiens]; similar to Vacuolar biogenesis protein END1 (PEP5 protein) (Vacuolar protein sorting 11) (Swiss-Prot:P12868) [Saccharomyces cerevisiae] 2 4 8 3 At2g05250 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 2 4 8 4 At2g05440 glycine-rich protein 2 4 8 5 At2g05540 glycine-rich protein 2 4 8 6 At2g05760 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 2 4 8 7 At2g05840 20S proteasome alpha subunit A2 (PAA2) identical to GB:AF043519 2 4 8 8 At2g06005 expressed protein 2 4 8 9 At2g06040 expressed protein 2 4 8 10 At2g14240 hypothetical protein and genefinder 2 4 8 11 At2g14290 F-box family protein contains F-box domain Pfam:PF00646 2 4 8 12 At2g14590 hypothetical protein 2 4 8 13 At2g14660 expressed protein contains Pfam PF04543: Family of unknown function (DUF589); similar to cThy28kD (GI:995778) [Gallus gallus]; similar to thymocyte protein mThy28 (GI:23978374) [Mus musculus] 2 4 8 14 At2g14820 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 4 8 15 At2g14860 "peroxisomal membrane protein 22 kDa, putative similar to 22 kDa peroxisomal membrane protein {Mus musculus} SWISS-PROT:P42925, NCBI_gi:454833" 2 4 8 16 At2g15050 "lipid transfer protein, putative similar to SP|Q42641 nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) {Brassica oleracea}; contains Pfam Protease inhibitor/seed storage/LTP family domain PF00234" 2 4 8 17 At2g15090 "fatty acid elongase, putative similar to fatty acid elongase 1 [GI:881615]" 2 4 8 18 At2g18130 purple acid phosphatase (PAP11) identical to purple acid phosphatase (PAP11) GI:20257484 from [Arabidopsis thaliana] 2 4 8 19 At2g18190 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 4 8 20 At2g18300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain ;supported by cDNA gi|20127067|gb|AF488597.1| 2 4 8 21 At2g18370 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid-transfer protein [Nicotiana glauca] GI:6782436; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 4 8 22 At2g18530 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 8 23 At2g18600 "RUB1-conjugating enzyme, putative strong similarity to gi:6635457 RUB1 conjugating enzyme [Arabidopsis thaliana]; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 8 24 At2g18780 F-box family protein contains F-box domain Pfam:PF00646 2 4 8 25 At2g18850 "SET domain-containing protein low similarity to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 2 4 9 1 At2g21490 "dehydrin family protein contains Pfam domain, PF00257: Dehydrin" 2 4 9 2 At2g21550 "bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative similar to THY-1 [SP| Q05762] and THY-2 [SP|Q05763] from Arabidopsis thaliana; contains Pfam profiles PF00303 thymidylate synthase and PF00186 dihydrofolate reductase" 2 4 9 3 At2g21730 "mannitol dehydrogenase, putative similar to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase (Populus tremuloides) (gi:14279694); contains Pfam zinc-binding dehydrogenase domain PF00107" 2 4 9 4 At2g21800 expressed protein 2 4 9 5 At2g21940 "shikimate kinase, putative similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202" 2 4 9 6 At2g22000 expressed protein 2 4 9 7 At2g22190 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 2 4 9 8 At2g22250 "aminotransferase class I and II family protein similar to aspartate aminotransferase from Bacillus stearothermophilus SP|Q59228, Thermus aquaticus SP|O33822; contains Pfam profile PF00155 aminotransferase, classes I and II" 2 4 9 9 At2g25150 "transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase [gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase [gi:11559716] from Taxus cuspidata; contains Pfam transferase family domain PF00248; contains EST gb:R65039" 2 4 9 10 At2g25210 60S ribosomal protein L39 (RPL39A) 2 4 9 11 At2g25370 zinc finger protein-related contains weak similarity to zinc fingers and Pfam:PF01485 IBR domain 2 4 9 12 At2g25450 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 2 4 9 13 At2g25620 "protein phosphatase 2C, putative / PP2C, putative " 2 4 9 14 At2g25650 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 2 4 9 15 At2g25800 expressed protein 2 4 9 16 At2g25840 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 2 4 9 17 At2g28480 expressed protein contains Pfam profile PF01985: Uncharacterised protein family; expression supported by MPSS 2 4 9 18 At2g28540 expressed protein 2 4 9 19 At2g28680 "cupin family protein similar to legumin (11S-globulin) from Ginkgo biloba [GI:949869], 11S globulin from Avena sativa [GI:472867]; contains a 11-S plant seed storage protein signature (PS00305)" 2 4 9 20 At2g28740 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 4 9 21 At2g28910 CAX-interacting protein 4 (CAXIP4) contains Pfam domain PF00098: Zinc knuckle; identical to cDNA CAX-interacting protein 4 GI:27651998 2 4 9 22 At2g28970 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 9 23 At2g29150 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 4 9 24 At2g29220 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 4 9 25 At2g31880 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 10 1 At2g31940 expressed protein 2 4 10 2 At2g32090 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 2 4 10 3 At2g32150 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 4 10 4 At2g32290 "beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative similar to beta-amylase GI:13560977 from [Castanea crenata]" 2 4 10 5 At2g32340 TraB family protein contains Pfam domain PF01963: TraB family 2 4 10 6 At2g32500 expressed protein 2 4 10 7 At2g32560 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 10 8 At2g35140 expressed protein ; expression supported by MPSS 2 4 10 9 At2g35200 expressed protein 2 4 10 10 At2g35360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 4 10 11 At2g35420 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 10 12 At2g35585 expressed protein 2 4 10 13 At2g35620 "leucine-rich repeat transmembrane protein kinase, putative similar to somatic embryogenesis receptor-like kinase 1 (SERK1) [Zea mays] gi|13897318|emb|CAC37640; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 10 14 At2g35740 sugar transporter family protein similar to proton myo-inositol transporter [Homo sapiens] GI:15211933; contains Pfam profile PF00083: major facilitator superfamily protein 2 4 10 15 At2g35795 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 2 4 10 16 At2g38390 "peroxidase, putative similar to peroxidase isozyme [Armoracia rusticana] gi|217934|dbj|BAA14144; identical to cDNA class III peroxidase ATP34, GI:17530563" 2 4 10 17 At2g38450 expressed protein 2 4 10 18 At2g38630 expressed protein 2 4 10 19 At2g38690 hypothetical protein 2 4 10 20 At2g38820 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 4 10 21 At2g38860 "proteaseI (pfpI)-like protein (YLS5) contains Pfam profile PF01965: DJ-1/PfpI family; supporting cDNA gi|13122287|dbj|AB047808.1|; identical to proteaseI (pfpI)-like protein [Arabidopsis thaliana] GI:13122288, cDNA proteaseI (pfpI)-like protein GI:13122287" 2 4 10 22 At2g39000 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 4 10 23 At2g39050 "hydroxyproline-rich glycoprotein family protein contains QXW lectin repeat domain, Pfam:PF00652" 2 4 10 24 At2g41590 expressed protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 2 4 10 25 At2g41630 transcription initiation factor IIB-1 / general transcription factor TFIIB-1 (TFIIB1) identical to transcription initiation factor IIB-1 (TFIIB1) SP:P48512 from [Arabidopsis thaliana] 2 4 11 1 At2g41760 expressed protein 2 4 11 2 At2g41820 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 11 3 At2g41960 expressed protein 2 4 11 4 At2g42010 "phospholipase D beta 1 / PLD beta 1 (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta) {Arabidopsis thaliana}; contains Pfam profiles: PF00614 phospholipase D.active site motif, PF00168 C2 domain" 2 4 11 5 At2g42170 "actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806" 2 4 11 6 At2g42220 rhodanese-like domain-containing protein contains rhodanese-like domain PF:00581 2 4 11 7 At2g44830 "protein kinase, putative similar to protein kinase PVPK-1 [Phaseolus vulgaris] SWISS-PROT:P15792" 2 4 11 8 At2g44890 cytochrome P450 family protein contains Pfam PF00067: Cytochrome P450; similar to Cytochrome P450 86A2 (SP:O23066) [Arabidopsis thaliana] 2 4 11 9 At2g45030 "mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus" 2 4 11 10 At2g45100 "transcription factor IIB (TFIIB) family protein contains Pfam domain, PF00382: Transcription factor TFIIB repeat" 2 4 11 11 At2g45270 glycoprotease M22 family protein similar to SP|P36175 O-sialoglycoprotein endopeptidase (EC 3.4.24.57) (Glycoprotease) {Pasteurella haemolytica}; contains Pfam profile PF00814: Glycoprotease family 2 4 11 12 At2g45330 "tRNA 2'phosphotransferase, putative contains similarity to Swiss-Prot:Q12272 tRNA 2'phosphotransferase [Saccharomyces cerevisiae]; contains Pfam domain PF01885: RNA 2'-phosphotransferase, Tpt1 / KptA family" 2 4 11 13 At2g45520 expressed protein 2 4 11 14 At2g45560 cytochrome P450 family protein 2 4 11 15 At2g16365 F-box family protein contains Pfam:PF00646 F-box domain 2 4 11 16 At3g01015 expressed protein ; expression supported by MPSS 2 4 11 17 At3g01150 "polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Sus scrofa} SP|Q29099, {Mus musculus} SP|P17225; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 4 11 18 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) identical to SP|Q43735 Peroxidase 27 precursor (EC 1.11.1.7) (Atperox P27) (PRXR7) (ATP12a) {Arabidopsis thaliana} 2 4 11 19 At3g01345 Expressed protein 2 4 11 20 At3g01390 "vacuolar ATP synthase subunit G 1 (VATG1) / V-ATPase G subunit 1 (VAG1) / vacuolar proton pump G subunit 1 (VMA10) identical to SWISS-PROT:O82628 vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1, Vacuolar proton pump G subunit 1) [Arabidopsis thaliana]" 2 4 11 21 At3g01520 universal stress protein (USP) family protein similar to ER6 protein (GI:5669654) [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 2 4 11 22 At3g01580 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 4 11 23 At3g04170 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin-like protein type2 GB:CAA63023 [SP|P92996], GLP6 [SP|P92997], GLP2A [SP|P92999] [Arabidopsis thaliana]" 2 4 11 24 At3g04230 40S ribosomal protein S16 (RPS16B) similar to 40S ribosomal protein S16 GB:AAD22696 [Arabidopsis thaliana] 2 4 11 25 At3g04380 "SET domain-containing protein (SUVR4) nearly identical to Su(VAR)3-9-related protein 4 [Arabidopsis thaliana] GI:17066863; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4) GI:17066862, which is an SET domain protein similar to Drosophila SU(VAR)3-9" 2 4 12 1 At3g04440 "expressed protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 2 4 12 2 At3g04600 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 2 4 12 3 At3g04630 expressed protein 2 4 12 4 At3g04790 ribose 5-phosphate isomerase-related similar to ribose-5-phosphate isomerase GI:18654317 from [Spinacia oleracea] 2 4 12 5 At3g04830 expressed protein 2 4 12 6 At3g07350 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 4 12 7 At3g07400 lipase class 3 family protein contains Pfam profile PF01764: Lipase 2 4 12 8 At3g07525 "autophagocytosis-associated family protein contains autophagocytosis associated protein C-terminal domain, Pfam:PF03987" 2 4 12 9 At3g07568 expressed protein 2 4 12 10 At3g07740 transcriptional adaptor (ADA2a) identical to transcriptional adaptor ADA2a [Arabidopsis thaliana] gi|13591698|gb|AAK31319 2 4 12 11 At3g07760 expressed protein 2 4 12 12 At3g07930 HhH-GPD base excision DNA repair family protein 2 4 12 13 At3g07960 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 2 4 12 14 At3g10920 "superoxide dismutase [Mn], mitochondrial (SODA) / manganese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832" 2 4 12 15 At3g10970 haloacid dehalogenase-like hydrolase family protein low similarity to genetic modifier [Zea mays] GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 4 12 16 At3g11110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 2 4 12 17 At3g11180 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to leucoanthocyanidin dioxygenase GB:BAA20143 [Perilla frutescens], Malus domestica, SP|P51091; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 4 12 18 At3g11330 leucine-rich repeat family protein 2 4 12 19 At3g11390 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 12 20 At3g11520 "cyclin, putative (CYC2) similar to cyclin [Arabidopsis thaliana] GI:1360646; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain; identical to cDNA cyclin box (cyc2) partial cds GI:456019" 2 4 12 21 At3g11560 expressed protein 2 4 12 22 At3g13950 expressed protein 2 4 12 23 At3g14000 expressed protein 2 4 12 24 At3g14120 expressed protein similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus norvegicus] 2 4 12 25 At3g14170 expressed protein 2 4 13 1 At3g14300 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 2 4 13 2 At3g14350 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase 1 GB:AAC27894 from [Zea mays]" 2 4 13 3 At3g14510 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:9294375; similar to geranylgeranyl pyrophosphate synthetase GB:P34802 [Arabidopsis thaliana]" 2 4 13 4 At3g14570 glycosyl transferase family 48 protein contains similarity to glucan synthases 2 4 13 5 At3g17130 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 13 6 At3g17185 expressed protein 2 4 13 7 At3g17320 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 4 13 8 At3g17370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 13 9 At3g17520 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to PIR|S04045|S04045 embryonic abundant protein D-29 [Gossypium hirsutum]; contains Pfam profile PF02987: Late embryogenesis abundant protein 2 4 13 10 At3g17580 hypothetical protein similar to hypothetical protein GB:AAD49763 from [Arabidopsis thaliana] 2 4 13 11 At3g17720 pyridoxal-dependent decarboxylase family protein similar to SP|P54767|DCE_LYCES Glutamate decarboxylase (EC 4.1.1.15) {Lycopersicon esculentum}; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain 2 4 13 12 At3g17780 expressed protein 2 4 13 13 At3g20420 "ribonuclease III family protein similar to CAF protein (RNA helicase/RNAseIII) [Arabidopsis thaliana] GI:6102610; contains Pfam profiles: PF00636 RNase3 domain, PF00035 Double-stranded RNA binding motif" 2 4 13 14 At3g20480 tetraacyldisaccharide 4'-kinase family protein contains Pfam PF02606: tetraacyldisaccharide-1-P 4'-kinase 2 4 13 15 At3g20650 "mRNA capping enzyme family protein contains Pfam PF03291: mRNA capping enzyme, large subunit" 2 4 13 16 At3g20710 F-box protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; contains weak hit to Pfam PF00646: F-box domain 2 4 13 17 At3g20865 "arabinogalactan-protein, putative (AGP) similar to gi|10880503|gb|AAG24281" 2 4 13 18 At3g20920 translocation protein-related contains weak similarity to Drosophila translocation protein 1 (GI:558181) [Drosophila melanogaster] 2 4 13 19 At3g21150 zinc finger (B-box type) family protein contains Pfam profile:PF01760 CONSTANS family zinc finger 2 4 13 20 At3g21180 "calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA9) identical to SP|Q9LU41 Potential calcium-transporting ATPase 9, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) {Arabidopsis thaliana}" 2 4 13 21 At3g23880 F-box family protein contains F-box domain Pfam:PF00646 2 4 13 22 At3g23940 dehydratase family contains Pfam profile: PF00920 dehydratase family 2 4 13 23 At3g24110 "calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand, similar to calcium-modulated proteins" 2 4 13 24 At3g24150 expressed protein 2 4 13 25 At3g24310 "myb family transcription factor similar to myb protein 305 GB:JQ0958 from [garden snapdragon] (Plant Cell (1991) 3 (2), 115-125);" 2 4 14 1 At3g24360 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 2 4 14 2 At3g24520 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 4 14 3 At3g24560 expressed protein contains Pfam profile PF01171: PP-loop family 2 4 14 4 At3g27325 expressed protein 2 4 14 5 At3g27380 "succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-1) nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1) [gi:12049598] from Arabidopsis thaliana" 2 4 14 6 At3g27540 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 2 4 14 7 At3g27600 hypothetical protein 2 4 14 8 At3g27800 hypothetical protein 2 4 14 9 At3g27860 PWWP domain-containing protein 2 4 14 10 At3g28030 "UV hypersensitive protein (UVH3) / DNA-repair protein, putative identical to UV hypersensitive protein [Arabidopsis thaliana] gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629 DNA-repair protein complementing XP-G cells homolog (Xeroderma pigmentosum group G complementing protein homolog) [Xenopus laevis]" 2 4 14 11 At3g28080 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 4 14 12 At3g32330 DNA repair protein-related weak similarity to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe} 2 4 14 13 At3g32903 hypothetical protein 2 4 14 14 At3g33520 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin 2 4 14 15 At3g42080 hypothetical protein hypothetical proteins - Arabidopsis thaliana 2 4 14 16 At3g42300 hypothetical protein 2 4 14 17 At3g42380 hypothetical protein 2 4 14 18 At3g42560 hypothetical protein 2 4 14 19 At3g42620 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 2 4 14 20 At3g45730 expressed protein 2 4 14 21 At3g45770 "oxidoreductase, zinc-binding dehydrogenase family protein similar to nuclear receptor binding factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724; contains Pfam zinc-binding dehydrogenase domain PF00107" 2 4 14 22 At3g45950 splicing factor-related similar to step II splicing factor SLU7 [Homo sapiens] GI:4249705 2 4 14 23 At3g46010 actin-depolymerizing factor 1 (ADF1) identical to SP|Q39250 Actin-depolymerizing factor 1 (ADF-1) (AtADF1) {Arabidopsis thaliana} 2 4 14 24 At3g46190 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 4 14 25 At3g46260 protein kinase-related contains low similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 2 4 15 1 At3g46440 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 2 4 15 2 At3g46500 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin 20-oxidase from A. thaliana [gi:1109699], N. tabacum [GI:3402332]; contains Pfam profile: PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family" 2 4 15 3 At3g49290 expressed protein 2 4 15 4 At3g49330 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 15 5 At3g49510 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 4 15 6 At3g49570 expressed protein 2 4 15 7 At3g49750 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to resistance gene Hcr2-5B, Lycopersicon esculentum, EMBL:AF053997" 2 4 15 8 At3g49810 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 2 4 15 9 At3g49990 expressed protein 2 4 15 10 At3g50050 aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease 2 4 15 11 At3g52730 "ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein contains Pfam profile: PF05365 ubiquinol-cytochrome C reductase, UQCRX/QCR9 like" 2 4 15 12 At3g52780 purple acid phosphatase (PAP20) identical to purple acid phosphatase GI:20257491 from [Arabidopsis thaliana] 2 4 15 13 At3g52930 "fructose-bisphosphate aldolase, putative similar to SP|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic isozyme {Cicer arietinum}, cytosolic aldolase [Fragaria x ananassa] GI:10645188; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 2 4 15 14 At3g52970 "cytochrome P450 family protein cytochrome P450 76A2, eggplant, PIR:S38534" 2 4 15 15 At3g53150 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 4 15 16 At3g53210 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 2 4 15 17 At3g53350 "myosin heavy chain-related low similarity to filamin-interacting protein S-FILIP [Rattus norvegicus] GI:21392397, nonmuscle heavy chain myosin II-A [Mus musculus] GI:17978023" 2 4 15 18 At3g53400 expressed protein 2 4 15 19 At3g56000 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 4 15 20 At3g56060 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 2 4 15 21 At3g56220 expressed protein 2 4 15 22 At3g56290 expressed protein 2 4 15 23 At3g56460 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], zeta-crystallin / quinone reductase (NADPH) - Mus musculus, PIR:A54932; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 2 4 15 24 At3g56520 "no apical meristem (NAM) family protein similar to nam-like protein 5 (GI:21105738 ) [Petunia x hybrida]; hypothetical protein SENU5, senescence up-regulated - Lycopersicon eculentum, PIR:T07182" 2 4 15 25 At3g56700 "male sterility protein, putative similar to SP|Q08891 Male sterility protein 2 {Arabidopsis thaliana}; contains Pfam profile PF03015: Male sterility protein" 2 4 16 1 At3g56760 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820" 2 4 16 2 At3g59580 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 2 4 16 3 At3g59640 glycine-rich protein 2 4 16 4 At3g59790 "mitogen-activated protein kinase, putative / MAPK, putative (MPK10) mitogen-activated protein kinase (MAPK)(AtMPK10), PMID:12119167" 2 4 16 5 At3g59845 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; allyl alcohol dehydrogenase - Nicotiana tabacum, EMBL:AB036735" 2 4 16 6 At3g59990 "methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to Methionine aminopeptidase 2 (EC 3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo sapiens} SP|P50579; contains Pfam profile PF00557: metallopeptidase family M24; supporting cDNA gi|11344921|gb|AF300880.1|AF300880" 2 4 16 7 At3g60050 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 16 8 At3g60220 "zinc finger (C3HC4-type RING finger) family protein (ATL4) contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 16 9 At3g60260 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 4 16 10 At3g63000 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 2 4 16 11 At3g63060 "circadian clock coupling factor, putative similar to gb:AAK56924 circadian clock coupling factor ZGT {Nicotiana tabacum}" 2 4 16 12 At3g63230 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 2 4 16 13 At3g63260 "protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 4 16 14 At3g63400 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9" 2 4 16 15 At3g63430 "expressed protein similarity to predicted protein, Arabidopsis thaliana" 2 4 16 16 At4g00060 nucleotidyltransferase family protein contains Pfam profile: PF01909 nucleotidyltransferase domain 2 4 16 17 At4g00120 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 4 16 18 At4g02480 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar to mitochondrial sorting protein 1 (MSP1) protein (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]" 2 4 16 19 At4g02530 chloroplast thylakoid lumen protein SP:022773 ;TL16_ARATH 2 4 16 20 At4g02680 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 4 16 21 At4g02725 expressed protein 2 4 16 22 At4g02900 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 2 4 16 23 At4g02940 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to A. thaliana hypothetical protein T13L16.2, GenBank accession number 2708738; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 2 4 16 24 At4g03110 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327, CUG-BP and ETR-3 like factor 3 [Homo sapiens] GI:12746392; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 4 16 25 At4g03153 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 2 4 17 1 At4g07943 "hypothetical protein similar to At4g05290, At3g42740, At5g35010, At5g36840, At3g43390, At2g14770, At2g05560, At4g08880, At1g34730" 2 4 17 2 At4g07990 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI5 DnaJ homolog subfamily B member 10 Mus musculus ; contains Pfam profile PF00226 DnaJ domain 2 4 17 3 At4g08190 "Ras-related GTP-binding protein, putative similar to Ras-related protein Rab11A (Swiss-Prot:Q96283) [Arabidopsis thaliana]" 2 4 17 4 At4g08250 "scarecrow transcription factor family protein SCARECROW - Arabidopsis thaliana, PID:g1497987" 2 4 17 5 At4g08395 hypothetical protein 2 4 17 6 At4g08460 expressed protein 2 4 17 7 At4g08652 hypothetical protein 2 4 17 8 At4g08710 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 4 17 9 At4g11540 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 17 10 At4g11600 "glutathione peroxidase, putative " 2 4 17 11 At4g11770 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 2 4 17 12 At4g11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase identical to Hydroxymethylglutaryl-CoA synthase (EC 4.1.3.5) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl coenzyme A synthase) (Swiss-Prot:P54873) [Arabidopsis thaliana] 2 4 17 13 At4g11980 MutT/nudix family protein low similarity to SP|P54570 ADP-ribose pyrophosphatase (EC 3.6.1.13) {Bacillus subtilis}; contains Pfam profile PF00293: NUDIX domain 2 4 17 14 At4g12030 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 2 4 17 15 At4g12220 hypothetical protein 2 4 17 16 At4g12280 "copper amine oxidase family protein contains Pfam domain, PF01179: Copper amine oxidase, enzyme domain" 2 4 17 17 At4g14780 "protein kinase, putative similar to protein kinase ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 4 17 18 At4g14820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 17 19 At4g14960 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} 2 4 17 20 At4g15010 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 2 4 17 21 At4g15140 expressed protein 2 4 17 22 At4g15210 "beta-amylase (BMY1) / 1,4-alpha-D-glucan maltohydrolase identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) SP:P25853 [Arabidopsis thaliana]" 2 4 17 23 At4g15360 cytochrome P450 family protein 2 4 17 24 At4g15400 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], benzylalcohol acetyltransferase [Clarkia breweri][GI:6166336][PMID:10588064]" 2 4 17 25 At4g17880 "basic helix-loop-helix (bHLH) family protein bHLH protein, Arabidopsis thaliana, PATCHX:E255557" 2 4 18 1 At4g17930 hypothetical protein 2 4 18 2 At4g18070 expressed protein 2 4 18 3 At4g18130 phytochrome E (PHYE) identical to SP|P42498 Phytochrome E {Arabidopsis thaliana} 2 4 18 4 At4g18310 hypothetical protein 2 4 18 5 At4g18340 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 2 4 18 6 At4g18460 D-Tyr-tRNA(Tyr) deacylase family protein contains Pfam profile: PF02580 D-Tyr-tRNA(Tyr) deacylase 2 4 18 7 At4g18520 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 18 8 At4g21310 "expressed protein predicted protein, Arabidopsis thaliana" 2 4 18 9 At4g21350 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582198; contains Pfam profile PF04564: U-box domain 2 4 18 10 At4g21510 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 18 11 At4g21560 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 2 4 18 12 At4g21710 DNA-directed RNA polymerase II 135 kDa polypeptide / RNA polymerase II subunit 2 (RPB135) (RPB2) (RP140) identical to SP|P38420 DNA-directed RNA polymerase II 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 2) {Arabidopsis thaliana} 2 4 18 13 At4g21780 expressed protein 2 4 18 14 At4g21920 expressed protein 2 4 18 15 At4g21980 "autophagy 8a (APG8a) identical to autophagy 8a [Arabidopsis thaliana] GI:19912151; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 2 4 18 16 At4g24520 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-ferrihemoprotein reductase NADPH-cytochrome P450 oxydoreductase isoform 1 [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183562, SP|P37116 NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR) [Vigna radiata] {Phaseolus aureus}" 2 4 18 17 At4g24560 "ubiquitin-specific protease 16, putative (UBP16) similar to ubiquitin-specific protease 16 GI:11993477 [Arabidopsis thaliana]" 2 4 18 18 At4g24730 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 4 18 19 At4g24760 expressed protein 2 4 18 20 At4g24950 hypothetical protein 2 4 18 21 At4g24990 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 4 18 22 At4g25160 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 2 4 18 23 At4g25220 "transporter, putative similar to glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982" 2 4 18 24 At4g27780 acyl-CoA binding protein 2 (ACBP2) identical to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057 2 4 18 25 At4g27810 hypothetical protein 2 4 19 1 At4g27970 C4-dicarboxylate transporter/malic acid transport family protein contains Pfam profile PF03595: C4-dicarboxylate transporter/malic acid transport protein 2 4 19 2 At4g28020 expressed protein contains Pfam PF01980: Uncharacterised protein family 2 4 19 3 At4g28160 hydroxyproline-rich glycoprotein family protein similar to Putative cell wall protein precursor (Swiss-Prot:P47925) [Arabidopsis thaliana] 2 4 19 4 At4g28220 "NADH dehydrogenase-related similar to 64 kDa mitochondrial NADH dehydrogenase [Neurospora crassa] GI:4753821, alternative NADH-dehydrogenase [Yarrowia lipolytica] GI:3718005; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 2 4 19 5 At4g28370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger)" 2 4 19 6 At4g28410 aminotransferase-related similar to nicotianamine aminotransferase [Hordeum vulgare subsp. vulgare] GI:6469090 2 4 19 7 At4g31020 expressed protein 2 4 19 8 At4g31060 "AP2 domain-containing transcription factor, putative TINY, Arabidopsis thaliana, PID:E218696" 2 4 19 9 At4g31200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein related to DAN26 [Homo sapiens] gi|1770394|emb|CAA69591 2 4 19 10 At4g31270 expressed protein 2 4 19 11 At4g31430 expressed protein 2 4 19 12 At4g31490 "coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative similar to Coatomer beta subunit (Beta-coat protein) (Beta-COP) from {Rattus norvegicus} SP|P23514, {Mus musculus} SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam profile: PF01602 Adaptin N terminal region" 2 4 19 13 At4g31630 "transcriptional factor B3 family protein similar to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 2 4 19 14 At4g31690 "transcriptional factor B3 family protein similar to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 2 4 19 15 At4g34190 stress enhanced protein 1 (SEP1) identical to stress enhanced protein 1 (SEP1) GI:7384978 from [Arabidopsis thaliana] 2 4 19 16 At4g34230 "cinnamyl-alcohol dehydrogenase, putative similar to cinnamyl alcohol dehydrogenase, Nicotiana tabacum [SP|P30359], Populus deltoides, PATCHX:G288753" 2 4 19 17 At4g34360 "protease-related similar to PIR|I46078 endothelin converting enzyme, Bos primigenius taurus" 2 4 19 18 At4g34412 expressed protein 2 4 19 19 At4g34570 bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (THY-2) identical to SP|Q05763 2 4 19 20 At4g34630 expressed protein 2 4 19 21 At4g34810 "auxin-responsive family protein similar to auxin-induced protein X10A5 (SP:P33079) [Glycine max]; small auxin up RNA (SAUR-AC1), Arabidopsis thaliana, PIR2:T06084" 2 4 19 22 At4g34870 "peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP1) / rotamase identical to cyclophilin (CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Catharanthus roseus] SWISS-PROT:Q39613" 2 4 19 23 AT5G57480 PC-1 D11 2 4 19 24 3XSSC PC-1 D23 2 4 19 25 AT1G29930 PC-1 H11 2 4 20 1 3XSSC PC-1 H23 2 4 20 2 AT3G44150 PC-1 L11 2 4 20 3 3XSSC PC-1 L23 2 4 20 4 AT4G00810 PC-1 P11 2 4 20 5 3XSSC PC-1 P23 2 4 20 6 At4g37490 G2/mitotic-specific cyclin (CYC1) / B-like cyclin (CYC1) identical to SP|P30183 G2/mitotic-specific cyclin (B-like cyclin) {Arabidopsis thaliana} 2 4 20 7 At4g37550 "formamidase, putative / formamide amidohydrolase, putative similar to SP|Q50228 Formamidase (EC 3.5.1.49) (Formamide amidohydrolase) {Methylophilus methylotrophus}; contains Pfam profile PF03069: Acetamidase/Formamidase family" 2 4 20 8 At4g37710 VQ motif-containing protein contains PF05678: VQ motif 2 4 20 9 At4g37770 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to 1-aminocyclopropane-1-carboxylate synthase, Arabidopsis thaliana, GI:940370 [S71174]" 2 4 20 10 At4g37950 expressed protein 2 4 20 11 At4g38020 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P18644 rRNA (adenosine-2'-O-)-methyltransferase (EC 2.1.1.66) {Streptomyces cyaneus}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 2 4 20 12 At4g38160 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 4 20 13 At4g38200 guanine nucleotide exchange family protein similar to Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Homo sapiens] SP|Q9Y6D5; contains Pfam profile PF01369: Sec7 domain 2 4 20 14 At5g01620 expressed protein several hypothetical proteins - Arabidopsis thaliana 2 4 20 15 At5g01670 "aldose reductase, putative similar to aldose reductase [Hordeum vulgare][GI:728592], aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944]" 2 4 20 16 At5g01810 CBL-interacting protein kinase 15 (CIPK15) identical to CBL-interacting protein kinase 15 [Arabidopsis thaliana] gi|13249134|gb|AAK16692; identical to novel serine/threonine protein kinase [Arabidopsis thaliana] gi|1777312|dbj|BAA06311; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain 2 4 20 17 At5g01870 "lipid transfer protein, putative similar to lipid transfer protein 6 from Arabidopsis thaliana [gi:8571927]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 4 20 18 At5g02030 homeodomain protein (BELLRINGER) several homeodomain proteins; 2 4 20 19 At5g02070 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 4 20 20 At5g02240 expressed protein 2 4 20 21 At5g02290 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] SWISS-PROT:Q06548" 2 4 20 22 At5g05020 expressed protein 2 4 20 23 At5g05080 "ubiquitin-conjugating enzyme, putative similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24 kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin carrier protein) {Homo sapiens}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 20 24 At5g05260 cytochrome P450 79A2 (CYP79A2) identical to SP|Q9FLC8 Cytochrome P450 79A2 (EC 1.-.-.-) {Arabidopsis thaliana} 2 4 20 25 At5g05310 expressed protein 2 4 21 1 At5g05450 "DEAD/DEAH box helicase, putative (RH18) " 2 4 21 2 At5g05500 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 2 4 21 3 At5g05640 nucleoprotein-related contains weak similarity to Swiss-Prot:P03515 nucleocapsid protein (Nucleoprotein) [Punta toro phlebovirus] 2 4 21 4 At5g05670 expressed protein 2 4 21 5 At5g08340 riboflavin biosynthesis protein-related contains weak similarity to Riboflavin biosynthesis protein ribF. (Swiss-Prot:P08391) [Escherichia coli O157:H7] 2 4 21 6 At5g08390 "transducin family protein / WD-40 repeat family protein similar to katanin p80 subunit [Strongylocentrotus purpuratus] GI:3005601; contains Pfam profile PF00400: WD domain, G-beta repeat" 2 4 21 7 At5g08535 "D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain; contains a 2nt micro-exon, as identified using GeneSeqer." 2 4 21 8 At5g08565 expressed protein 2 4 21 9 At5g08750 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 21 10 At5g09225 expressed protein 2 4 21 11 At5g09330 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365: No apical meristem (NAM) protein 2 4 21 12 At5g09370 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein - Hordeum vulgare, EMBL:AF109195; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 4 21 13 At5g12140 "cysteine protease inhibitor, putative / cystatin, putative similar to SP|P31726 Cystatin I precursor (CORN kernel cysteine proteinase inhibitor) {Zea mays}; contains Pfam profile PF00031: Cystatin domain" 2 4 21 14 At5g12200 dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) identical to dihydropyrimidine amidohydrolase (PYD2) [Arabidopsis thaliana] GI:28194047; similar to SP|Q9EQF5 Dihydropyrimidinase (EC 3.5.2.2) (DHPase) (Hydantoinase) (DHP) {Mus musculus}; contains Pfam profile PF01979: Amidohydrolase family 2 4 21 15 At5g12340 expressed protein ; expression supported by MPSS 2 4 21 16 At5g12400 "PHD finger transcription factor, putative similarity to predicted proteins, Arabidopsis thaliana" 2 4 21 17 At5g12920 expressed protein contains 3 weak WD-40 repeats (PF00400); low similarity to MEK kinase alpha (GI:4028547); transcriptional repressor TUP1 (GI:3406654) [Dictyostelium discoideum]; Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (TGF-beta receptor interacting protein 1) (TRIP-1) (SP:Q38884) [Arabidopsis thaliana] 2 4 21 18 At5g12980 "rcd1-like cell differentiation protein, putative similar to protein involved in sexual development [Schizosaccharomyces pombe] GI:1620896; contains Pfam profile PF04078: Cell differentiation family, Rcd1-like" 2 4 21 19 At5g13170 "nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula]; identical to cDNA senescence-associated protein (SAG29) mRNA, partial cds GI:4426938" 2 4 21 20 At5g13220 expressed protein 2 4 21 21 At5g15950 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase 2 4 21 22 At5g16010 "3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to steroid 5alpha-reductase - Rattus norvegicus, PIR:A34239 [SP|24008]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544" 2 4 21 23 At5g16190 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 4 21 24 At5g16250 expressed protein 2 4 21 25 At5g16390 biotin carboxyl carrier protein 1 (BCCP1) identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor [Arabidopsis thaliana] gi|9759121|dbj|BAB09606 2 4 22 1 At5g16430 hypothetical protein 2 4 22 2 At5g16600 myb family transcription factor (MYB43) contains PFAM profile: myb DNA binding domain PF00249 2 4 22 3 At5g16650 DNAJ heat shock N-terminal domain-containing protein similar to SP|P30725 Chaperone protein dnaJ Clostridium acetobutylicum; contains Pfam profile PF00226: DnaJ domain 2 4 22 4 At5g19210 "DEAD/DEAH box helicase, putative EUKARYOTIC INITIATION FACTOR 4A-II (EIF-4A-II), Homo sapiens, SWISSPROT:IF42_HUMAN" 2 4 22 5 At5g19270 hypothetical protein 2 4 22 6 At5g19420 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 2 4 22 7 At5g19470 MutT/nudix family protein similar to SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain 2 4 22 8 At5g19650 "ovate protein, putative 84% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568" 2 4 22 9 At5g19710 "hypothetical protein HPt phosphotransmitter - Arabidopsis thaliana, EMBL:AB041766" 2 4 22 10 At5g19875 expressed protein 2 4 22 11 At5g19930 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 2 4 22 12 At5g23250 "succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative similar to SP|P36967 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) {Dictyostelium discoideum}; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 2 4 22 13 At5g23290 "c-myc binding protein, putative / prefoldin, putative similar to Swiss-Prot:Q99471 prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1) [Homo sapiens]" 2 4 22 14 At5g23430 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] 2 4 22 15 At5g23470 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 4 22 16 At5g23660 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 2 4 22 17 At5g23720 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain; contains TG acceptor splice site at intron 9" 2 4 22 18 At5g23860 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| 2 4 22 19 At5g23910 kinesin motor protein-related 2 4 22 20 At5g26600 expressed protein weak similarity to SP|P18549 Isopenicillin N epimerase (EC 5.-.- ) {Streptomyces clavuligerus} 2 4 22 21 At5g26770 expressed protein 2 4 22 22 At5g26920 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 2 4 22 23 At5g26980 syntaxin 41 (SYP41) / TLG2a identical to SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis thaliana} 2 4 22 24 At5g27170 hypothetical protein 2 4 22 25 At5g27240 DNAJ heat shock N-terminal domain-containing protein 2 4 23 1 At5g27430 signal peptidase subunit family protein contains Pfam profile: PF04573 signal peptidase subunit 2 4 23 2 At5g27500 hypothetical protein hypothetical proteins - Arabidopsis thaliana 2 4 23 3 At5g35540 hypothetical protein 2 4 23 4 At5g35600 "histone deacetylase, putative (HDA7) similar to SP|O22446 Histone deacetylase (HD) {Arabidopsis thaliana}; contains Pfam profile PF00850: Histone deacetylase family" 2 4 23 5 At5g35715 "cytochrome P450 71B8, putative (CYP71B8) nearly identical to Cytochrome P450 71B8 (SP:P58048) [Arabidopsis thaliana];" 2 4 23 6 At5g35750 histidine kinase (AHK2) identical to histidine kinase AHK2 [Arabidopsis thaliana] gi|13537196|dbj|BAB40774 2 4 23 7 At5g35920 "cytochrome P450, putative similar to cytochrome P450 [Sinapis alba] gi|3283433|gb|AAD03415" 2 4 23 8 At5g35970 "DNA-binding protein, putative similar to SWISS-PROT:Q60560 DNA-binding protein SMUBP-2 (Immunoglobulin MU binding protein 2, SMUBP-2) [Mesocricetus auratus]" 2 4 23 9 At5g36140 cytochrome P450-related similar to taxane 13-alpha-hydroxylase [Taxus cuspidata] GI:17148242 2 4 23 10 At5g36180 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 4 23 11 At5g39410 expressed protein 2 4 23 12 At5g39470 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 23 13 At5g39650 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 2 4 23 14 At5g39710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 23 15 At5g39870 hypothetical protein 2 4 23 16 At5g39930 expressed protein ; expression supported by MPSS 2 4 23 17 At5g40110 hypothetical protein 2 4 23 18 At5g40170 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4 [Lycopersicon hirsutum] gi|2808683|emb|CAA05268" 2 4 23 19 At5g42900 expressed protein similar to unknown protein (pir||T05226) 2 4 23 20 At5g42930 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 2 4 23 21 At5g43080 "cyclin, putative similar to A-type cyclins from [Nicotiana tabacum] GI:1064931, [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 4 23 22 At5g43140 "peroxisomal membrane 22 kDa family protein contains Mpv17 / PMP22 family domain, Pfam:PF04117" 2 4 23 23 At5g43300 glycerophosphoryl diester phosphodiesterase family protein contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 2 4 23 24 At5g43360 inorganic phosphate transporter (PHT3) identical to inorganic phosphate transporter [Arabidopsis thaliana] GI:2780347 2 4 23 25 At5g43500 expressed protein 2 4 24 1 At5g43560 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 4 24 2 At5g46130 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 4 24 3 At5g46160 ribosomal protein L14 family protein / huellenlos paralog (HLP) contains Pfam profile PF00238: Ribosomal protein L14p/L23e; identical to cDNA HUELLENLOS PARALOG (HLP) nuclear gene for mitochondrial product GU:18140859 2 4 24 4 At5g46300 expressed protein 2 4 24 5 At5g46360 "outward rectifying potassium channel, putative (KCO3) identical to KCO3 protein [Arabidopsis thaliana] gi|4583550|emb|CAB40380; similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 2 4 24 6 At5g46510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 4 24 7 At5g46570 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 24 8 At5g46730 glycine-rich protein 2 4 24 9 At5g46790 expressed protein similar to unknown protein (pir||T05073) 2 4 24 10 At5g49420 MADS-box protein (AGL84) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 2 4 24 11 At5g49470 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 2 4 24 12 At5g49620 "myb family transcription factor (MYB78) contains PFAM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB78) mRNA, partial cds GI:3941509" 2 4 24 13 At5g49660 "leucine-rich repeat transmembrane protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 24 14 At5g49810 methionine S-methyltransferase identical to methionine S-methyltransferase [Arabidopsis thaliana] GI:5733429 2 4 24 15 At5g49870 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 24 16 At5g50030 invertase/pectin methylesterase inhibitor family protein contains similarity to pollen-specific protein Bnm1 Brassica napus GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 24 17 At5g50090 expressed protein 2 4 24 18 At5g52840 NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 13 kDa-B subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-13Kd-B) (CI-13Kd-B) (Complex I subunit B13) (Swiss-Prot:Q63362) [Rattus norvegicus] 2 4 24 19 At5g52900 expressed protein 2 4 24 20 At5g53045 expressed protein 2 4 24 21 At5g53090 "oxidoreductase, putative similar to forever young oxidoreductase (FEY3) GI:12004621 from [Arabidopsis thaliana]" 2 4 24 22 At5g53260 seed maturation family protein similar to SP|P09444 Late embryogenesis abundant protein D-34 (LEA D-34) {Gossypium hirsutum}; contains Pfam profile PF04927: Seed maturation protein 2 4 24 23 At5g53320 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 24 24 At5g53490 "thylakoid lumenal 17.4 kDa protein, chloroplast identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}" 2 4 24 25 At5g53540 "MSP1 protein, putative / intramitochondrial sorting protein, putative similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) [Saccharomyces cerevisiae]; contains Pfam domain, PF00004: ATPase, AAA family" 2 4 25 1 At5g56200 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 4 25 2 At5g56260 dimethylmenaquinone methyltransferase family protein similar to bacterial S-adenosylmethionine:2-demethylmenaquinone methyltransferases; contains Pfam profile PF03737: Dimethylmenaquinone methyltransferase 2 4 25 3 At5g56420 F-box family protein contains F-box domain Pfam:PF00646 2 4 25 4 At5g56480 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 4 25 5 At5g56660 IAA-amino acid hydrolase 2 (ILL2) identical to IAA-amino acid hydrolase homolog 2 precursor [Arabidopsis thaliana] SWISS-PROT:P54970 2 4 25 6 At5g56720 "malate dehydrogenase, cytosolic, putative similar to cytosolic malate dehydrogenase from Mesembryanthemum crystallinum [SP|O24047], Medicago sativa [SP|O48905], Prunus persica [GI:15982948]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 2 4 25 7 At5g56900 "CwfJ-like family protein / zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF04677: Protein similar to CwfJ C-terminus 1, PF04676: Protein similar to CwfJ C-terminus 2" 2 4 25 8 At5g56950 "nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP)" 2 4 25 9 At5g59460 "scarecrow-like transcription factor 11 (SCL11) identical to cDNA scarecrow-like 11 (SCL11) mRNA, partial cds gi:4580526" 2 4 25 10 At5g59500 expressed protein 2 4 25 11 At5g59690 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 4 25 12 At5g59750 "riboflavin biosynthesis protein, putative similar to SP|P50855 Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] {Actinobacillus pleuropneumoniae}; contains Pfam profiles PF00925: GTP cyclohydrolase II, PF00926: 3,4-dihydroxy-2-butanone 4-phosphate synthase" 2 4 25 13 At5g59880 actin-depolymerizing factor 3 (ADF3) identical to SP|Q9ZSK4 Actin-depolymerizing factor 3 (ADF 3) (AtADF3) {Arabidopsis thaliana} 2 4 25 14 At5g59920 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 25 15 At5g60080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 25 16 At5g60140 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 2 4 25 17 At5g62800 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 2 4 25 18 At5g62860 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 2 4 25 19 At5g63030 "glutaredoxin, putative similar to glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699" 2 4 25 20 At5g63070 "40S ribosomal protein S15, putative " 2 4 25 21 At5g63200 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|P28290 Sperm-specific antigen 2 (Cleavage signal-1 protein) (CS-1) Homo sapiens; contains Pfam profile PF00515: TPR Domain 2 4 25 22 At5g63270 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 2 4 25 23 At5g63450 "cytochrome P450, putative " 2 4 25 24 At5g63490 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 2 4 25 25 At5g66030 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| 2 4 26 1 At5g66050 expressed protein 2 4 26 2 At5g66160 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical to cDNA ReMembR-H2 protein JR700 mRNA, complete cds GI:6942146" 2 4 26 3 At5g66210 "calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand" 2 4 26 4 At5g66320 zinc finger (GATA type) family protein 2 4 26 5 At5g66360 "ribosomal RNA adenine dimethylase family protein similar to SP|P41819 Dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF00398: ribosomal RNA adenine dimethylase family protein" 2 4 26 6 At5g66540 expressed protein ; supported by full-Length cDNA gi:12057175 from [Arabidopsis thaliana] 2 4 26 7 At5g66600 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547; expression supported by MPSS" 2 4 26 8 3xSSC 3xSSC 2 4 26 9 3xSSC 3xSSC 2 4 26 10 3xSSC 3xSSC 2 4 26 11 3xSSC 3xSSC 2 4 26 12 3xSSC 3xSSC 2 4 26 13 3xSSC 3xSSC 2 4 26 14 3xSSC 3xSSC 2 4 26 15 3xSSC 3xSSC 2 4 26 16 At3g45730 expressed protein 2 4 26 17 At3g45770 "oxidoreductase, zinc-binding dehydrogenase family protein similar to nuclear receptor binding factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724; contains Pfam zinc-binding dehydrogenase domain PF00107" 2 4 26 18 At3g45950 splicing factor-related similar to step II splicing factor SLU7 [Homo sapiens] GI:4249705 2 4 26 19 At3g46010 actin-depolymerizing factor 1 (ADF1) identical to SP|Q39250 Actin-depolymerizing factor 1 (ADF-1) (AtADF1) {Arabidopsis thaliana} 2 4 26 20 At3g46190 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 4 26 21 At3g46260 protein kinase-related contains low similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 2 4 26 22 At3g46440 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 2 4 26 23 At3g46500 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin 20-oxidase from A. thaliana [gi:1109699], N. tabacum [GI:3402332]; contains Pfam profile: PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family" 2 4 26 24 Blank Blank 2 4 26 25 Blank Blank 3 1 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 1 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 1 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 3 1 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 3 1 1 5 atc06 Randomly generated negative control 3 1 1 6 atc12 Randomly generated negative control 3 1 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 1 1 8 atc02 Randomly generated negative control 3 1 1 9 At1g01940 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 3 1 1 10 At1g02000 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 3 1 1 11 At1g02100 leucine carboxyl methyltransferase family protein contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} 3 1 1 12 At1g02140 "mago nashi family protein similar to Mago Nashi, Genbank Accession Number U03559; contains Pfam PF02792: Mago nashi protein domain" 3 1 1 13 At1g02300 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase GI:609175 from [Nicotiana rustica]" 3 1 1 14 At1g02350 protoporphyrinogen oxidase-related contains very low similarity to protoporphyrinogen oxidase [SP|P55826] 3 1 1 15 At1g02520 "multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]" 3 1 1 16 At1g02580 maternal embryogenesis control protein / MEDEA (MEA) nearly identical to MEDEA GB:AAC39446 GI:3089625 from [Arabidopsis thaliana]; contains Pfam profile PF00856: SET domain 3 1 1 17 At1g05190 "ribosomal protein L6 family protein Similar to Mycobacterium RlpF (gb|Z84395). ESTs gb|T75785,gb|R30580,gb|T04698 come from this gene" 3 1 1 18 At1g05240 "peroxidase, putative similar to peroxidase; peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334" 3 1 1 19 At1g05410 expressed protein 3 1 1 20 At1g05450 protease inhibitor/seed storage/lipid transfer protein (LTP)-related similar to geranyl diphosphate synthase large subunit [Mentha x piperita] GI:6449052 3 1 1 21 At1g05610 "glucose-1-phosphate adenylyltransferase, putative / ADP-glucose pyrophosphorylase, putative (APS2) similar to SP|P52416 from [Vicia faba]; contains Pfam profile PF00483: Nucleotidyl transferase; identical to cDNA GI:31408039" 3 1 1 22 At1g05660 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 5 [Lycopersicon esculentum] GI:2459817; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 1 1 23 At1g05790 lipase class 3 family protein contains Pfam profile PF01764: Lipase 3 1 1 24 At1g05840 aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease 3 1 1 25 At1g08320 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 3 1 2 1 At1g08390 expressed protein 3 1 2 2 At1g08560 syntaxin-related protein KNOLLE (KN) / syntaxin 111 (SYP111) identical to SP|Q42374 Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111) {Arabidopsis thaliana}; BAC F22O13 has a deletion of a cytosine at position 7887 3 1 2 3 At1g08620 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 3 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 3 1 2 5 At1g08800 "expressed protein weak similarity to SP|Q02455 Myosin-like protein MLP1 {Saccharomyces cerevisiae}; contains Pfam profile PF04576: Protein of unknown function, DUF593" 3 1 2 6 At1g08960 "cation exchanger, putative (CAX11) similar to sodium/calcium exchanger protein [Mus musculus] gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 3 1 2 7 At1g09010 glycoside hydrolase family 2 protein low similarity to mannosidase [gi:5359712] from Cellulomonas fimi 3 1 2 8 At1g11610 "cytochrome P450, putative very strong similarity to cytochrome P450 (SP:Q9SAB6) [Arabidopsis thaliana]; is a member of the PF|00067 Cytochrome P450 family" 3 1 2 9 At1g11655 expressed protein 3 1 2 10 At1g11820 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 3 1 2 11 At1g11870 "seryl-tRNA synthetase, putative / serine--tRNA ligase, putative similar to PIR|T03949 serine--tRNA ligase (EC 6.1.1.11) serS {Zea mays}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF02403: Seryl-tRNA synthetase N-terminal domain" 3 1 2 12 At1g11980 "ubiquitin family protein similar to Chain A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726 from [Arabidopsis thaliana]" 3 1 2 13 At1g12040 "leucine-rich repeat family protein / extensin family protein (LRX1) similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 1 2 14 At1g12200 flavin-containing monooxygenase family protein / FMO family protein low similarity to FMO2 from Homo sapiens [SP|Q99518]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like 3 1 2 15 At1g12260 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 3 1 2 16 At1g15020 "thioredoxin family protein low similarity to FAD-dependent sulfhydryl oxidase-2 [Rattus norvegicus] GI:12483919; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 3 1 2 17 At1g15060 expressed protein 3 1 2 18 At1g15215 expressed protein 3 1 2 19 At1g15230 "expressed protein ESTs gb|R30529, gb|Z48463, gb|Z48467, gb|AA597369 and gb|AA394772 come from this gene" 3 1 2 20 At1g15390 "peptide deformylase, mitochondrial / polypeptide deformylase 1A (PDF1A) nearly identical to SP|Q9FV53 Peptide deformylase, mitochondrial precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; contains Pfam profile PF01327: polypeptide deformylase; supporting cDNA gi|11320951|gb|AF250959.1|AF250959" 3 1 2 21 At1g15420 expressed protein 3 1 2 22 At1g15600 hypothetical protein 3 1 2 23 At1g15670 "kelch repeat-containing F-box family protein similar to SP|Q9ER30 Kelch-related protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 1 2 24 At1g18450 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| 3 1 2 25 At1g18490 expressed protein 3 1 3 1 At1g18660 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 3 1 3 2 At1g18720 expressed protein similar to YGL010w-like protein GI:2982301 from [Picea mariana] 3 1 3 3 At1g18910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 3 4 At1g18980 "germin-like protein, putative similar to germin-like protein subfamily T member 1 [SP|P92995]; contains PS00725 germin family signature" 3 1 3 5 At1g19110 inter-alpha-trypsin inhibitor heavy chain-related similar to SP|Q61704 Inter-alpha-trypsin inhibitor heavy chain H3 precursor {Mus musculus}; contains Pfam profile PF00092: von Willebrand factor type A domain 3 1 3 6 At1g19150 "chlorophyll A-B binding protein, putative / LHCI type II, putative very strong similarity to PSI type II chlorophyll a/b-binding protein Lhca2*1 GI:541565 from [Arabidopsis thaliana]; contains Pfam profile: PF00504 chlorophyll A-B binding protein" 3 1 3 7 At1g22060 expressed protein 3 1 3 8 At1g22120 hypothetical protein 3 1 3 9 At1g22275 expressed protein 3 1 3 10 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 3 1 3 11 At1g22450 "cytochrome c oxidase subunit 6b, putative (COX6b) nearly identical to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] GI:6518353" 3 1 3 12 At1g22510 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 3 13 At1g22680 hypothetical protein 3 1 3 14 At1g22740 "Ras-related protein (RAB7) / AtRab75 / small GTP-binding protein, putative identical to SP:O04157 Ras-related protein Rab7 (AtRab75) [Arabidopsis thaliana]" 3 1 3 15 At1g26270 phosphatidylinositol 3- and 4-kinase family protein similar to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 3 1 3 16 At1g26330 hypothetical protein 3 1 3 17 At1g26520 cobalamin synthesis/P47K family protein similar to dopamine-responsive protein [Homo sapiens] GI:13177623; contains Pfam profile PF02492: Cobalamin synthesis protein/P47K 3 1 3 18 At1g26580 expressed protein similar to putative MYB family transcription factor GB:AAD17429 GI:4335752 from [Arabidopsis thaliana] 3 1 3 19 At1g26730 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 3 1 3 20 At1g26790 Dof-type zinc finger domain-containing protein similar to H-protein promoter binding factor-2b GI:3386548 from [Arabidopsis thaliana] 3 1 3 21 At1g26930 "kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646 F-box domain" 3 1 3 22 At1g27000 bZIP family transcription factor 3 1 3 23 At1g29890 acetyltransferase-related low similarity to O-acetyltransferase [Cryptococcus neoformans var. neoformans] GI:17063556 3 1 3 24 At1g29950 expressed protein 3 1 3 25 At1g30100 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase GI:6715257 from [Phaseolus vulgaris]" 3 1 4 1 At1g30135 expressed protein 3 1 4 2 At1g30350 pectate lyase family protein similar to pectate lyase GP:14289169 from [Salix gilgiana];contains Pfam profile: PF00544: Pectate lyase 3 1 4 3 At1g30420 "ATP-binding cassette transport protein, putative contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 3 1 4 4 At1g30560 "transporter, putative similar to glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982" 3 1 4 5 At1g30620 "UDP-D-xylose 4-epimerase, putative (MUR4) similar to SP|P55180 UDP-glucose 4-epimerase (EC 5.1.3.2) from Bacillus subtilis, GI:3021357 UDP-galactose 4-epimerase from Cyamopsis tetragonoloba; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains TIGRfam profile TIGR01179: UDP-glucose 4-epimerase" 3 1 4 6 At1g33600 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to gi|9294355|dbj|BAB02252 [Arabidopsis thaliana]" 3 1 4 7 At1g33700 "expressed protein contains Pfam domain PF04685: Protein of unknown function, DUF608" 3 1 4 8 At1g33880 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains Pfam PF04548: AIG1 family; 3 1 4 9 At1g33940 hypothetical protein 3 1 4 10 At1g34100 "choline kinase, putative similar to choline kinase (GmCK2p) GI:1438881 from [Glycine max]; contains Pfam profile PF01633: Choline/ethanolamine kinase; could not find a suitable start codon; this may be a pseudogene, a transposon insertion is found immediately upstream." 3 1 4 11 At1g34160 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 4 12 At1g34355 forkhead-associated domain-containing protein / FHA domain-containing protein 3 1 4 13 At1g34400 hypothetical protein 3 1 4 14 At1g44478 hypothetical protein 3 1 4 15 At1g44674 hypothetical protein 3 1 4 16 At1g44880 "Ulp1 protease family protein similar to At5g28170, At1g35110, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 1 4 17 At1g44960 expressed protein 3 1 4 18 At1g45180 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 4 19 At1g45231 "WW domain-containing protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 3 1 4 20 At1g46696 hypothetical protein slight similarity to maebl (GI:20087019)[Plasmodium falciparum]. 3 1 4 21 At1g47128 "cysteine proteinase (RD21A) / thiol protease identical to SP|P43297 Cysteine proteinase RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana}, thiol protease RD21A SP:P43297 from [Arabidopsis thaliana]" 3 1 4 22 At1g50060 "pathogenesis-related protein, putative similar to prb-1b [Nicotiana tabacum] GI:19970; contains Pfam profile PF00188: SCP-like extracellular protein" 3 1 4 23 At1g50150 hypothetical protein similar to hypothetical protein GB:AAD50048 GI:5734783 from [Arabidopsis thaliana] 3 1 4 24 At1g50360 "myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF00612 IQ calmodulin-binding motif" 3 1 4 25 At1g50420 "scarecrow-like transcription factor 3 (SCL3) identical to GB:AAD24404 GI:4580515 from [Arabidopsis thaliana] (Plant J. 18 (1), 111-119 (1999))" 3 1 5 1 At1g50610 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor-like protein kinase GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]" 3 1 5 2 At1g50670 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 5 3 At1g50880 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 1 5 4 At1g50940 "electron transfer flavoprotein alpha subunit family protein contains Pfam profile: PF00766 electron transfer flavoprotein, alpha subunit" 3 1 5 5 At1g53600 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 5 6 At1g53650 "RNA-binding protein, putative similar to RNA-binding protein GB:AAA86641 GI:1174153 from [Arabidopsis thaliana]" 3 1 5 7 At1g53820 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 5 8 At1g53870 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 5 9 At1g54030 "GDSL-motif lipase, putative similar to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216391, GI:1216389 from [Brassica napus]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 1 5 10 At1g54080 "oligouridylate-binding protein, putative similar to oligouridylate binding protein GI:6996560 from [Nicotiana plumbaginifolia]" 3 1 5 11 At1g54215 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 1 5 12 At1g54260 "histone H1/H5 family protein contains Pfam domain, PF00538: linker histone H1 and H5 family" 3 1 5 13 At1g57780 heavy-metal-associated domain-containing protein low similarity to myosin-like antigen GI:159877 Onchocerca volvulus; contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 5 14 At1g57860 60S ribosomal protein L21 similar to 60S ribosomal protein L21 GI:3885884 from [Oryza sativa] 3 1 5 15 At1g58170 disease resistance-responsive protein-related / dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 1 5 16 At1g58225 expressed protein 3 1 5 17 At1g58350 expressed protein contains Pfam profile PF05057: Protein of unknown function (DUF676); supporting cDNA gi|6520166|dbj|AB028199.1| 3 1 5 18 At1g58410 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 5 19 At1g59124 "disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein; identical to cDNA RXF10 mRNA for PRM1 homolog, partial cds GI:6520172; contains Pfam profiles PF00931: NB-ARC domain and PF00560: Leucine Rich Repeat" 3 1 5 20 At1g59520 expressed protein (CW7) 3 1 5 21 At1g62390 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein contains Pfam profiles PF00564: PB1 domain, PF00515: TPR Domain" 3 1 5 22 At1g62450 Rho GDP-dissociation inhibitor family protein similar to SP|P52565 Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha) {Homo sapiens}; contains Pfam profile PF02115: RHO protein GDP dissociation inhibitor 3 1 5 23 At1g62640 "3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast / beta-ketoacyl-ACP synthase III / 3-ketoacyl-acyl carrier protein synthase III (KAS III) identical to SP|P49243 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) {Arabidopsis thaliana}" 3 1 5 24 At1g62710 "vacuolar processing enzyme beta / beta-VPE identical to SP|Q39044 Vacuolar processing enzyme, beta-isozyme precursor (EC 3.4.22.-) (Beta-VPE) {Arabidopsis thaliana}" 3 1 5 25 At1g62850 expressed protein similar to Immature colon carcinoma transcript 1 (Digestion substraction 1) (DS- 1) (Swiss-Prot:Q14197) [Homo sapiens] 3 1 6 1 At1g62900 "O-methyltransferase, putative similar to GB:AAB96879 from [Arabidopsis thaliana] (Biochim. Biophys. Acta 1353 (3), 199-202 (1997))" 3 1 6 2 At1g63060 expressed protein 3 1 6 3 At1g63110 cell division cycle protein-related contains 9 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 3 1 6 4 At1g65820 "microsomal glutathione s-transferase, putative similar to MGST3_HUMAN SP:O14880" 3 1 6 5 At1g65880 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501 3 1 6 6 At1g66060 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577); common family comprised of At4g09440, At1g66000, At1g66060" 3 1 6 7 At1g66120 "acyl-activating enzyme 11 (AAE11) similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230, acyl-activating enzyme 11 [Arabidopsis thaliana] GI:29893231" 3 1 6 8 At1g66250 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 3 1 6 9 At1g66320 F-box family protein contains F-box domain Pfam:PF00646 3 1 6 10 At1g66490 F-box family protein contains weak hit to Pfam PF00646: F-box domain;; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 3 1 6 11 At1g66540 "cytochrome P450, putative Similar to cytochrome P450 91A1 (SP:Q9FG65)[Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450" 3 1 6 12 At1g69230 expressed protein 3 1 6 13 At1g69280 expressed protein 3 1 6 14 At1g69410 "eukaryotic translation initiation factor 5A, putative / eIF-5A, putative strong similarity to eukaryotic initiation factor 5A (2) (Nicotiana plumbaginifolia) GI:19702, SP|Q9AXQ6| Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Lycopersicon esculentum}" 3 1 6 15 At1g69470 hypothetical protein 3 1 6 16 At1g69580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 6 17 At1g69650 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 1 6 18 At1g69830 "alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative similar to SP|P17859 Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo}, alpha-amylase [Malus x domestica] GI:7532799; contains Pfam profile PF00128: Alpha amylase, catalytic domain" 3 1 6 19 At1g69890 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 3 1 6 20 At1g72690 expressed protein 3 1 6 21 At1g72750 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 3 1 6 22 At1g72920 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 3 1 6 23 At1g72980 LOB domain family protein / lateral organ boundaries domain family protein (LBD7) identical to SP|Q9SSM9 Putative LOB domain protein 7 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 3 1 6 24 At1g73165 Clavata3 / ESR-Related-1 (CLE1) Clavata3/ESR-Related-1 (CLE1) 3 1 6 25 At1g73210 expressed protein 3 1 7 1 At1g73360 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein protodermal factor2 (GI:14276060) [Arabidopsis thaliana]; similar to homeobox protein GI:1173621 from [ Phalaenopsis sp.] 3 1 7 2 At1g73410 myb family transcription factor (MYB54) identical to putative transcription factor (MYB54) GI:3941471 from [Arabidopsis thaliana] 3 1 7 3 AT5G57480 PC-1 A10 3 1 7 4 3XSSC PC-1 A22 3 1 7 5 AT1G29930 PC-1 E10 3 1 7 6 3XSSC PC-1 E22 3 1 7 7 AT3G44150 PC-1 I10 3 1 7 8 3XSSC PC-1 I22 3 1 7 9 AT4G00810 PC-1 M10 3 1 7 10 3XSSC PC-1 M22 3 1 7 11 At1g76250 expressed protein 3 1 7 12 At1g76310 "cyclin, putative similar to B-like cyclin GI:780267 from (Medicago sativa); contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 1 7 13 At1g76440 expressed protein 3 1 7 14 At1g76500 "DNA-binding family protein contains Pfam domain, PF02178: AT hook motif" 3 1 7 15 At1g76660 expressed protein 3 1 7 16 At1g76710 SET domain-containing protein (ASHH1) low similarity to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain; identical to cDNA ASH1-like protein 1 (ASHH1) partial cds GI:15488417 3 1 7 17 At1g76880 "trihelix DNA-binding protein, putative similar to DNA-binding protein DF1 [Pisum sativum] GI:13646986" 3 1 7 18 At1g76920 "F-box family protein (FBX3) contains similarity to stamina pistilloidia GI:4101570, the pea ortholog of Fim and UFO from [Pisum sativum]" 3 1 7 19 At1g79550 "phosphoglycerate kinase, putative similar to SP|P41758 Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) {Chlamydomonas reinhardtii}; contains Pfam profile PF00162: phosphoglycerate kinase" 3 1 7 20 At1g79600 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 3 1 7 21 At1g79740 "hAT dimerisation domain-containing protein contains Pfam profiles: PF04937 domain of unknown function (DUF659), PF05699 hAT family dimerisation domain" 3 1 7 22 At1g79790 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 1 7 23 At1g79915 hypothetical protein 3 1 7 24 At1g79960 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 3 1 7 25 At1g80100 "phosphotransfer family protein similar to histidine-containing phosphotransfer protein [Catharanthus roseus] GI:13774348, ATHP3 [Arabidopsis thaliana] GI:4156245" 3 1 8 1 At1g80160 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 3 1 8 2 At2g03000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 8 3 At2g03050 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 1 8 4 At2g03250 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 3 1 8 5 At2g03310 expressed protein 3 1 8 6 At2g03500 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 8 7 At2g03550 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873; contains an esterase/lipase/thioesterase active site serine domain (prosite: PS50187) 3 1 8 8 At2g03740 late embryogenesis abundant domain-containing protein / LEA domain-containing protein similar to cold-regulated gene cor15b [Arabidopsis thaliana] GI:456016; contains Pfam profile PF02987: Late embryogenesis abundant protein 3 1 8 9 At2g03810 18S pre-ribosomal assembly protein gar2-related contains weak similarity to Swiss-Prot:P41891 protein gar2 [Schizosaccharomyces pombe] 3 1 8 10 At2g07705 hypothetical protein 3 1 8 11 At2g07715 "ribosomal protein L2, putative similar to ribosomal protein L2 [Gossypium arboreum] GI:17933133; contains Pfam profile PF00181: Ribosomal Proteins L2, RNA binding domain" 3 1 8 12 At2g07740 zinc knuckle (CCHC-type) family protein similar to zinc finger protein GB:AAA75253; some members of this protein family have a weak CCHC zinc fingers that is mostly from retroviral gag proteins (nucleocapsid) 3 1 8 13 At2g08986 hypothetical protein 3 1 8 14 At2g10340 hypothetical protein 3 1 8 15 At2g10440 hypothetical protein 3 1 8 16 At2g10950 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 3 1 8 17 At2g11005 glycine-rich protein 3 1 8 18 At2g16210 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 3 1 8 19 At2g16280 "very-long-chain fatty acid condensing enzyme, putative similar to fatty acid condensing enzyme CUT1 GI:5001734 from [Arabidopsis thaliana]" 3 1 8 20 At2g16460 expressed protein 3 1 8 21 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana} GI:926929; contains Pfam profile PF00137: ATP synthase subunit C 3 1 8 22 At2g16720 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 8 23 At2g16780 WD-40 repeat protein (MSI2) contains 5 WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40 repeats (PF0400); 3 1 8 24 At2g16930 ribosomal protein L27 family protein contains Pfam profile PF01016: ribosomal protein L27 3 1 8 25 At2g16990 expressed protein 3 1 9 1 At2g19790 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 3 1 9 2 At2g19860 hexokinase 2 (HXK2) identical to hexokinase 2 [Arabidopsis thaliana] Swiss-Prot:P93834 3 1 9 3 At2g20020 expressed protein 3 1 9 4 At2g20080 expressed protein 3 1 9 5 At2g20250 hypothetical protein 3 1 9 6 At2g20310 expressed protein 3 1 9 7 At2g20490 nucleolar RNA-binding Nop10p family protein similar to Nop10p (GI:8096260) [Homo sapiens] 3 1 9 8 At2g20530 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 3 1 9 9 At2g23150 "NRAMP metal ion transporter 3 (NRAMP3) identical to metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 3 1 9 10 At2g23210 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 1 9 11 At2g23380 curly leaf protein (CURLY LEAF) / polycomb-group protein identical to polycomb group [Arabidopsis thaliana] GI:1903019 (curly leaf); contains Pfam profile PF00856: SET domain 3 1 9 12 At2g23440 expressed protein 3 1 9 13 At2g23610 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 1 9 14 At2g23680 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 3 1 9 15 At2g23840 HNH endonuclease domain-containing protein contains Pfam profile PF01844: HNH endonuclease 3 1 9 16 At2g23940 expressed protein contains 2 transmembrane domains; contains Pfam profile PF05620: Protein of unknown function (DUF788) 3 1 9 17 At2g26780 expressed protein contains Pfam profile TBP (TATA-binding protein) -interacting protein 120 (TIP120); contains TIGRFAM profile TIGR01612: reticulocyte binding protein 3 1 9 18 At2g26820 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family 3 1 9 19 At2g26975 "copper transporter, putative similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family" 3 1 9 20 At2g27020 "20S proteasome alpha subunit G (PAG1) (PRC8) identical to proteasome subunit alpha type 3 SP:O23715, GI:12644056 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc8 GI:2511591" 3 1 9 21 At2g27150 aldehyde oxidase 3 (AAO3) identical to GP:3172044:gnl:PID:d1029570:AB010080 3 1 9 22 At2g27210 kelch repeat-containing serine/threonine phosphoesterase family protein similar to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Calcineurin-like phosphoesterase 3 1 9 23 At2g27350 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 9 24 At2g27390 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 1 9 25 At2g30120 expressed protein 3 1 10 1 At2g30200 expressed protein 3 1 10 2 At2g30350 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 3 1 10 3 At2g30395 expressed protein 3 1 10 4 At2g30550 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 3 1 10 5 At2g30600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] 3 1 10 6 At2g30730 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (serine/threonine protein kinase) [Lycopersicon esculentum] gi|3668069|gb|AAC61805; contains protein kinase domain, Pfam:PF00069" 3 1 10 7 At2g30790 "photosystem II oxygen-evolving complex 23, putative expression not detected; similar to SP|O49344 (GI:28800560 (OEC23) Arabidopsis; Non-identical EST and protein matches suggested a possible frameshift in exon 1 (a 4 base deletion between 73745 and 73746) and a different start for exon 2 (base 73645)." 3 1 10 8 At2g33400 expressed protein 3 1 10 9 At2g33450 "50S ribosomal protein L28, chloroplast (CL28) " 3 1 10 10 At2g33590 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 3 1 10 11 At2g33655 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 1 10 12 At2g33775 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 3 1 10 13 At2g33810 squamosa promoter-binding protein-like 3 (SPL3) identical to squamosa-promoter binding protein like 3 [Arabidopsis thaliana] GI:2462081; contains Pfam profile PF03110: SBP domain 3 1 10 14 At2g34030 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 10 15 At2g34070 expressed protein 3 1 10 16 At2g36680 expressed protein 3 1 10 17 At2g36710 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 10 18 At2g36885 expressed protein 3 1 10 19 At2g36910 "multidrug resistance P-glycoprotein (PGP1) identical to P-glycoprotein GI:3849833 from [Arabidopsis thaliana]; homologous to mammalian mdr gene,contains ATP-binding cassette; related to multi drug resistance proteins" 3 1 10 20 At2g37060 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 3 1 10 21 At2g37100 protamine P1 family protein contains Pfam PF00260: Protamine P1 3 1 10 22 At2g37250 adenylate kinase family protein contains Pfam profile: PF00406 adenylate kinase 3 1 10 23 At2g37310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 10 24 At2g39910 expressed protein 3 1 10 25 At2g39970 peroxisomal membrane protein (PMP36) identical to 36kDa-peroxisomal membrane protein (PMP36) GI:15146342 from [Arabidopsis thaliana] 3 1 11 1 At2g40100 chlorophyll A-B binding protein (LHCB4.3) identical to Lhcb4:3 protein [Arabidopsis thaliana] GI:4741956; contains Pfam profile: PF00504 chlorophyll A-B binding protein 3 1 11 2 At2g40120 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 11 3 At2g40270 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 1 11 4 At2g40320 expressed protein and genefinder 3 1 11 5 At2g40460 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 3 1 11 6 At2g40510 40S ribosomal protein S26 (RPS26A) 3 1 11 7 At2g43070 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 3 1 11 8 At2g43130 "Ras-related protein (ARA-4) / small GTP-binding protein, putative identical to SP:P28187 Ras-related protein ARA-4 {Arabidopsis thaliana}" 3 1 11 9 At2g43260 F-box family protein / S locus-related weak similarity to S locus F-box (SLF)-S2 protein [Antirrhinum hispanicum] GI:13161526; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 1 11 10 At2g43330 "sugar transporter family protein similar to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit) [Homo sapiens], SP|Q01440 Membrane transporter D1 {Leishmania donovani}; contains Pfam profile PF00083: major facilitator superfamily protein" 3 1 11 11 At2g43510 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 3 1 11 12 At2g43560 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplast precursor (Ppiase) (Rotamase) (SP:O22870)[Arabidopsis thaliana]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 1 11 13 At2g43720 expressed protein 3 1 11 14 At2g43770 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to U5 snRNP-specific 40 kDa protein (GI:3820594) [Homo sapiens] 3 1 11 15 At2g46410 myb-related protein CAPRICE (CPC) identical to myb-related protein CAPRICE (CPC) GI:2346965 from [Arabidopsis thaliana] 3 1 11 16 At2g46460 hypothetical protein 3 1 11 17 At2g46610 "arginine/serine-rich splicing factor, putative similar to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana}" 3 1 11 18 At2g46660 "cytochrome P450, putative similar to cytochrome p450 (CYP78A9)(GI:17065344) {Arabidopsis thaliana}" 3 1 11 19 At2g46810 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 1 11 20 At2g46870 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 3 1 11 21 At2g47010 expressed protein 3 1 11 22 At2g47060 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 3 1 11 23 At3g02380 zinc finger protein CONSTANS-LIKE 2 (COL2) identical to putative flowering-time gene CONSTANS (COL2) GB:AAB67879 GI:1507699 SP:Q96502 (Arabidopsis thaliana) 3 1 11 24 At3g02440 expressed protein 3 1 11 25 At3g02560 40S ribosomal protein S7 (RPS7B) similar to ribosomal protein S7 GB:AAD26256 from [Secale cereale] 3 1 12 1 At3g02620 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Spinacia oleracea SP|P28645, Olea europaea SP|Q43593; contains Pfam profile PF03405 Fatty acid desaturase" 3 1 12 2 At3g02800 "tyrosine specific protein phosphatase family protein contains tyrosine specific protein phosphatases active site, PROSITE:PS00383" 3 1 12 3 At3g02860 expressed protein 3 1 12 4 At3g03010 expressed protein 3 1 12 5 At3g03070 "NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 13 kDa-A subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-13KD-A) (CI-13KD-A) (Swiss-Prot:P23934) [Bos taurus]" 3 1 12 6 At3g05675 expressed protein 3 1 12 7 At3g05710 "syntaxin, putative similar to syntaxin of plants 42 [Arabidopsis thaliana] GI:5059352" 3 1 12 8 At3g05860 MADS-box protein (AGL45) similar to MADS-box protein; PMID: 12837945; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 3 1 12 9 At3g05920 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 12 10 At3g06040 "ribosomal protein L12 family protein contains similarity to 50S ribosomal protein L12-C, chloroplast precursor GB:P36212 from [Arabidopsis thaliana]" 3 1 12 11 At3g06080 expressed protein identical to unknown protein GB:AAF30301 from [Arabidopsis thaliana] 3 1 12 12 At3g06230 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK8) mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 3 1 12 13 At3g06290 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 3 1 12 14 At3g09220 "laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], laccase GB:CAA74105 [Populus balsamifera subsp. trichocarpa]; contains Pfam profile: Multicopper oxidases" 3 1 12 15 At3g09280 expressed protein ; expression supported by MPSS 3 1 12 16 At3g09450 hypothetical protein 3 1 12 17 At3g09510 hypothetical protein 3 1 12 18 At3g09700 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain; similar to a region of DNAJ domain-containing protein MCJ GB:AAD38506 3 1 12 19 At3g09750 hypothetical protein 3 1 12 20 At3g09890 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 3 1 12 21 At3g09930 GDSL-motif lipase/hydrolase family protein similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile: PF00657 lipase acylhydrolase with GDSL-like motif 3 1 12 22 At3g12320 expressed protein 3 1 12 23 At3g12370 ribosomal protein L10 family protein similar to 50S ribosomal protein L10 [Oryza sativa] GB:AAC64971 GI:3777602 [Oryza sativa] 3 1 12 24 At3g12545 "lipid transfer protein-related low similarity to Lipid transfer protein [Brassica rapa] GI:3062791; contains Pfam profile PF00152: tRNA synthetases class II (D, K and N)" 3 1 12 25 At3g12600 MutT/nudix family protein contains Pfam profile PF00293: NUDIX domain 3 1 13 1 At3g12760 "expressed protein similar to RP42 protein [Homo sapiens] GI:9896486; contains Pfam profile PF00627: UBA/TS-N domain, PF03556: Domain of unknown function (DUF298)" 3 1 13 2 At3g12820 myb family transcription factor (MYB10) similar to myb factor GI:1945279 from [Oryza sativa] 3 1 13 3 At3g12990 "3' exoribonuclease family protein similar to SP|Q06265 Exosome complex exonuclease RRP45 [Homo sapiens]; contains Pfam profiles PF01138: 3' exoribonuclease family, domain 1, PF03725: 3' exoribonuclease family, domain 2" 3 1 13 4 At3g13040 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 13 5 At3g15353 "metallothionein protein, putative " 3 1 13 6 At3g15390 expressed protein low similarity to PRLI-interacting factor N [Arabidopsis thaliana] GI:11139276 3 1 13 7 At3g15540 auxin-responsive protein / indoleacetic acid-induced protein 19 (IAA19) identical to SP|O24409 Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) {Arabidopsis thaliana} 3 1 13 8 At3g15600 "hypothetical protein low similarity to KED [Nicotiana tabacum] GI:8096269; contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 1 13 9 At3g15750 expressed protein 3 1 13 10 At3g15810 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 13 11 At3g15970 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein similar to Ran binding protein [Homo sapiens] GI:624232; contains Pfam profile PF00638: RanBP1 domain 3 1 13 12 At3g16010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 13 13 At3g18680 aspartate/glutamate/uridylate kinase family protein similar to UMP-kinase GB:CAB38122 gi:4468612 from [Lactococcus lactis] ; contains Pfam profile PF00696: Amino acid kinase family 3 1 13 14 At3g18730 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 3 1 13 15 At3g18860 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] 3 1 13 16 At3g18930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 3 1 13 17 At3g19080 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 3 1 13 18 At3g19140 hypothetical protein 3 1 13 19 At3g19300 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 13 20 At3g19350 "polyadenylate-binding protein-related / PABP-related similar to poly(A)-binding protein [Cucumis sativus] GI:7528270; contains Pfam profile PF00658: Poly-adenylate binding protein, unique domain" 3 1 13 21 At3g22050 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function; weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris] 3 1 13 22 At3g22104 "phototropic-responsive NPH3 protein-related contains BTB/POZ domain, INTERPRO:IPR000210" 3 1 13 23 At3g22260 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 13 24 At3g22330 "DEAD box RNA helicase, putative similar to RNA helicases GI:3775995, GI:3775987 from [Arabidopsis thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 1 13 25 At3g22450 expressed protein ; expression supported by MPSS 3 1 14 1 At3g22490 "late embryogenesis abundant protein, putative / LEA protein, putative similar to LEA protein in group 5 (AtECP31) [Arabidopsis thaliana] GI:1526422; contains Pfam profile PF04927: Seed maturation protein" 3 1 14 2 At3g22680 expressed protein 3 1 14 3 At3g22740 homocysteine S-methyltransferase 3 (HMT-3) identical to homocysteine S-methyltransferase HMT-3 [Arabidopsis thaliana] GI:9966515; similar to homocysteine S-methyltransferase AtHMT-2 (GI:6685163) [Arabidopsis thaliana]; similar to selenocysteine methyltransferase GB:P56707 from [Astragalus bisulcatus] 3 1 14 4 At3g25655 expressed protein 3 1 14 5 At3g25710 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 1 14 6 At3g25855 expressed protein 3 1 14 7 At3g25900 homocysteine S-methyltransferase 1 (HMT-1) identical to GB:AAF23821 from [Arabidopsis thaliana] 3 1 14 8 At3g26050 expressed protein 3 1 14 9 At3g26100 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 3 1 14 10 At3g26230 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 3 1 14 11 At3g26280 "cytochrome P450 family protein identical to cytochrome P450 monooxygenase (CYP71B4) GB:D78603 [Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52 (1998))" 3 1 14 12 At3g29010 expressed protein ; expression supported by MPSS 3 1 14 13 At3g29040 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069 3 1 14 14 At3g29185 expressed protein 3 1 14 15 At3g29230 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 1 14 16 At3g29350 two-component phosphorelay mediator 1 (HP1) identical to ATHP1 [Arabidopsis thaliana] GI:4156241 3 1 14 17 At3g29390 hydroxyproline-rich glycoprotein family protein sequencing discrepancy between cDNA and genomic sequence prevents representation of entire coding sequence 3 1 14 18 At3g29640 hypothetical protein contains similarity to hypothetical proteins 3 1 14 19 At3g29710 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 1 14 20 At3g43760 hypothetical protein 3 1 14 21 At3g43810 "calmodulin-7 (CAM7) almost identical to calmodulin GI:16227 from [Arabidopsis thaliana], SP|P59220 Calmodulin-7 {Arabidopsis thaliana}" 3 1 14 22 At3g44020 thylakoid lumenal P17.1 protein contains Pfam PF00684 : DnaJ central domain (4 repeats); SP:Q9LXV9; PMID:11719511; supported by EST AI997589. 3 1 14 23 At3g44090 F-box family protein contains F-box domain Pfam:PF00646 3 1 14 24 At3g44235 hypothetical protein 3 1 14 25 At3g44300 nitrilase 2 (NIT2) identical to SP|P32962 Nitrilase 2 (EC 3.5.5.1) {Arabidopsis thaliana} 3 1 15 1 At3g44510 expressed protein 3 1 15 2 At3g44570 hypothetical protein 3 1 15 3 At3g47440 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 1 15 4 At3g47480 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 15 5 At3g47620 "TCP family transcription factor, putative auxin-induced basic helix-loop-helix transcription factor - Gossypium hirsutum, EMBL:AF165924" 3 1 15 6 At3g47675 expressed protein 3 1 15 7 At3g47833 expressed protein 3 1 15 8 At3g47890 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 1 15 9 At3g48050 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 3 1 15 10 At3g48110 "aminoacyl-t-RNA synthetase, putative similar to aminoacyl-t-RNA synthetase GI:2654226 from [Arabidopsis thaliana]; contains Pfam profiles: PF02092 glycyl-tRNA synthetase beta subunit,PF02091 glycyl-tRNA synthetase alpha subunit" 3 1 15 11 At3g51000 "epoxide hydrolase, putative similar to epoxide hydrolase [Glycine max] GI:2764806; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 1 15 12 At3g51050 FG-GAP repeat-containing protein 3 1 15 13 At3g51220 expressed protein contains Pfam doamin PF05701: Plant protein of unknown function (DUF827) 3 1 15 14 At3g51280 "male sterility MS5, putative similar to male sterility MS5 [Arabidopsis thaliana] GI:3859112; contains Pfam profile PF00515 TPR Domain" 3 1 15 15 At3g51440 "strictosidine synthase family protein similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088" 3 1 15 16 At3g51500 "expressed protein predicted protein, Oryza sativa, EMBL:AP000367" 3 1 15 17 At3g51660 macrophage migration inhibitory factor family protein / MIF family protein contains Pfam profile: PF01187 Macrophage migration inhibitory factor family(MIF) 3 1 15 18 At3g51720 expressed protein contains Pfam PF05701: Plant protein of unknown function (DUF827) 3 1 15 19 At3g54190 "expressed protein GTP-binding regulatory protein beta chain, Dictyostelium discoideum, PIR:A47370" 3 1 15 20 At3g54250 "mevalonate diphosphate decarboxylase, putative similar to mevalonate diphosphate decarboxylase [Arabidopsis thaliana] gi|2288887|emb|CAA74700" 3 1 15 21 At3g54420 class IV chitinase (CHIV) almost identical to class IV chitinase from GI:2597826 [Arabidopsis thaliana] 3 1 15 22 At3g54480 SKP1 interacting partner 5 (SKIP5) identical to GP:14348816 SKP1-interacting partner 5 {Arabidopsis thaliana} 3 1 15 23 At3g54630 expressed protein weak similarity to retinoblastoma-associated protein HEC [Homo sapiens] GI:2501873 3 1 15 24 At3g54690 "sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein similar to SP|Q47334 Polysialic acid capsule expression protein kpsF {Escherichia coli}; contains Pfam profiles PF01380: sugar isomerase (SIS) domain, PF00571: CBS domain" 3 1 15 25 At3g54860 "vacuolar protein sorting protein, putative similar to Swiss-Prot:Q63615 vacuolar protein sorting 33A (r-vps33a) [Rattus norvegicus]; contains Pfam domain, PF00995: Sec1 family" 3 1 16 1 At3g54890 chlorophyll A-B binding protein / LHCI type I (CAB) identical to chlorophyll A/B-binding protein [Arabidopsis thaliana] GI:16207; contains Pfam profile: PF00504 chlorophyll A-B binding protein 3 1 16 2 At3g57690 "arabinogalactan-protein, putative (AGP23) similar to arabinogalactan protein [Arabidopsis thaliana] gi|10880503|gb|AAG24281" 3 1 16 3 At3g57750 "protein kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] gi|3549626|emb|CAA08794; contains protein kinase domain, Pfam:PF00069" 3 1 16 4 At3g57900 "hypothetical protein hypothetical protein T24P15.12 - Arabidopsis thaliana, PIR:T00930" 3 1 16 5 At3g57960 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 3 1 16 6 At3g58150 expressed protein similar to SP|Q9H6K4 Optic atrophy 3 protein {Homo sapiens} 3 1 16 7 At3g58210 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 1 16 8 At3g58390 "eukaryotic release factor 1 family protein / eRF1 family protein contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 3 1 16 9 At3g58450 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 3 1 16 10 At3g61170 pentatricopeptide (PPR) repeat-containing protein strong similarity to PCMP-H2 [Arabidopsis thaliana] GI:5050911; contains Pfam profile PF01535: PPR repeat 3 1 16 11 At3g61230 LIM domain-containing protein similar to SP|P29675 Pollen specific protein SF3 {Helianthus annuus}; contains Pfam profile PF00412: LIM domain 3 1 16 12 At3g61390 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana 3 1 16 13 At3g61430 plasma membrane intrinsic protein 1A (PIP1A) / aquaporin PIP1.1 (PIP1.1) (AQ1) identical to plasma membrane intrinsic protein 1A SP:P43285 from [Arabidopsis thaliana] 3 1 16 14 At3g61600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 3 1 16 15 At3g61650 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} 3 1 16 16 At3g61810 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]; contains Pfam profile PF00332: Glycosyl hydrolases family 17" 3 1 16 17 At3g61860 arginine/serine-rich splicing factor RSP31 (RSP31) identical to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana} 3 1 16 18 At4g00810 60S acidic ribosomal protein P1 (RPP1B) similar to acidic ribosomal protein p1 3 1 16 19 At4g00850 SSXT family protein low similarity to synovial sarcoma associated SS18-delta [Mus musculus] GI:17978535; contains Pfam profile PF05030: SSXT protein (N-terminal region) 3 1 16 20 At4g01000 ubiquitin family protein low similarity to SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam profile PF00240: Ubiquitin family 3 1 16 21 At4g01040 glycosyl hydrolase family 18 protein contains Pfam profile PF00704: Glycosyl hydrolases family 18 3 1 16 22 At4g01210 glycosyltransferase family protein 1 contains Pfam profile: PF00534 Glycosyl transferases group 1 3 1 16 23 At4g01250 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 3 1 16 24 At4g01420 "calcineurin B-like protein 5 (CBL5) identical to calcineurin B-like protein 5 (GI:9965366) [Arabidopsis thaliana]; similar to N. crassa calcineurin calcium-regulated protein phosphatase, GenBank accession number P87072" 3 1 16 25 At4g01450 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 3 1 17 1 At4g04220 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon pimpinellifolium] gi|3894389|gb|AAC78594" 3 1 17 2 At4g04350 "leucyl-tRNA synthetase, putative / leucine--tRNA ligase, putative similar to SP|P36430 Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) {Bacillus subtilis}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 3 1 17 3 At4g04525 hypothetical protein 3 1 17 4 At4g04610 5'-adenylylsulfate reductase (APR1) / PAPS reductase homolog (PRH19) identical to 5'-adenylylsulfate reductase [Arabidopsis thaliana] GI:2738756; identical to cDNA PAPS reductase homolog (PRH19) GI:1710111 3 1 17 5 At4g04760 "sugar transporter family protein similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 3 1 17 6 At4g04820 hypothetical protein 3 1 17 7 At4g04970 "callose synthase, putative / 1,3-beta-glucan synthase, putative similar to callose synthase 1 catalytic subunit GI:13649388 from [Arabidopsis thaliana]" 3 1 17 8 At4g05000 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 3 1 17 9 At4g09730 "DEAD/DEAH box helicase, putative RNA helicase -Mus musculus,PIR2:I84741" 3 1 17 10 At4g09775 hypothetical protein 3 1 17 11 At4g09960 MADS-box protein (AGL11) 3 1 17 12 At4g09970 expressed protein 3 1 17 13 At4g10130 "DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI7 DnaJ homolog subfamily B member 8 Mus musculus, SP|P50025 Chaperone protein dnaJ Legionella pneumophila; contains Pfam profile PF00226 DnaJ domain" 3 1 17 14 At4g10170 "synaptobrevin-related family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; vesicle-associated membrane protein 7B, Arabidopsis thaliana, AF025333" 3 1 17 15 At4g10340 "chlorophyll A-B binding protein CP26, chloroplast / light-harvesting complex II protein 5 / LHCIIc (LHCB5) identical to SP|Q9XF89 Chlorophyll A/B-binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) {Arabidopsis thaliana}; contains Pfam profile: PF00504 chlorophyll A-B binding protein; chlorophyll a/b-binding protein CP26 in PS II, Brassica juncea, gb:X95727" 3 1 17 16 At4g10400 F-box family protein contains F-box domain Pfam:PF00646 3 1 17 17 At4g13210 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 3 1 17 18 At4g13266 hypothetical protein 3 1 17 19 At4g13370 expressed protein 3 1 17 20 At4g13430 aconitase family protein / aconitate hydratase family protein contains Pfam profile PF00330: Aconitase family (aconitate hydratase 3 1 17 21 At4g13590 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 3 1 17 22 At4g13640 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 17 23 At4g13800 "permease-related contains 9 predicted transmembrane domains; contains Pfam PF05653: Protein of unknown function (DUF803); identified as COG0697, Permeases of the drug/metabolite transporter (DMT) superfamily" 3 1 17 24 At4g13840 transferase family protein low similarity to acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna] GI:6166328; contains Pfam profile PF02458: Transferase family 3 1 17 25 At4g16190 "cysteine proteinase, putative contains similarity to papain-like cysteine proteinase isoform I GI:7381219 from [Ipomoea batatas]" 3 1 18 1 At4g16230 GDSL-motif lipase/hydrolase family protein similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 3 1 18 2 At4g16400 expressed protein 3 1 18 3 At4g16444 expressed protein 3 1 18 4 At4g16566 "histidine triad family protein / HIT family protein contains Pfam domain, PF01230: HIT family (histidine triad protein family)" 3 1 18 5 At4g16620 integral membrane family protein / nodulin MtN21-related low similarity to MtN21 [Medicago truncatula] GI:2598575 3 1 18 6 At4g16745 exostosin family protein contains Pfam PF03016: Exostosin family 3 1 18 7 At4g16770 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to flavonol synthase from Petunia hybrida [SP|Q07512], Citrus unshiu [GI:4126403]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily; non-consensus GG acceptor splice site at exon 8" 3 1 18 8 At4g19320 "hypothetical protein simlar to At5g28170, At1g35110, At1g44880, At3g42530, At5g36020, At4g03970, At3g43010, At2g10350" 3 1 18 9 At4g19380 "alcohol oxidase-related similar to long chain fatty alcohol oxidase from Candida cloacae [GI:6983581], Candida tropicalis [GI:6983594]" 3 1 18 10 At4g19540 expressed protein 3 1 18 11 At4g19600 "cyclin family protein similar to cyclin T2a [Homo sapiens] GI:2981198; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 1 18 12 At4g19740 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 3 1 18 13 At4g19820 glycosyl hydrolase family 18 protein similar to chitinase/lysozyme GI:467689 from [Nicotiana tabacum] 3 1 18 14 At4g19980 expressed protein ; expression supported by MPSS 3 1 18 15 At4g20020 expressed protein 3 1 18 16 At4g22820 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 3 1 18 17 At4g22880 "leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative similar to SP|P51091 [Malus domestica]; contains PF03171 2OG-Fe(II) oxygenase superfamily" 3 1 18 18 At4g23030 MATE efflux protein-related contains Pfam profile PF01554: Uncharacterized membrane protein family 3 1 18 19 At4g23090 hypothetical protein 3 1 18 20 At4g23240 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 1 18 21 At4g23290 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 3 1 18 22 At4g23460 "beta-adaptin, putative strong similarity to SP|Q10567 Adapter-related protein complex 1 beta 1 subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin [Drosophila melanogaster] GI:434902; contains Pfam profile: PF01602 Adaptin N terminal region" 3 1 18 23 At4g23496 expressed protein 3 1 18 24 At4g26070 "mitogen-activated protein kinase kinase (MAPKK) (MKK1) (MEK1) identical to MEK1 [Arabidopsis thaliana] gi|2196704|gb|AAB97145; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 3 1 18 25 At4g26110 "nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP)" 3 1 19 1 At4g26260 expressed protein similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 3 1 19 2 At4g26320 arabinogalactan-protein (AGP13) identical to gi|10880503|gb|AAG24281 3 1 19 3 At4g26470 calcium-binding EF hand family protein low similarity to SP|P06787 Calmodulin {Saccharomyces cerevisiae}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 19 4 At4g26510 uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) nearly identical to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana} 3 1 19 5 At4g26650 "RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 3 1 19 6 At4g26710 ATP synthase subunit H family protein contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) [Homo sapiens] 3 1 19 7 At4g29285 expressed protein 3 1 19 8 At4g29350 profilin 2 (PRO2) (PFN2) (PRF2) identical to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis thaliana]; identical to cDNA profilin (PRF2) GI:9965570 3 1 19 9 At4g29510 "protein arginine N-methyltransferase, putative similar to protein arginine N-methyltransferase 1-variant 2 [Homo sapiens] GI:7453575" 3 1 19 10 At4g29570 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase homolog DesA [Arabidopsis thaliana] GI:4836443, cytidine deaminase 8 (CDA8) [Arabidopsis thaliana] GI:5080714; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 3 1 19 11 At4g29730 WD-40 repeat family protein contains 5 WD-40 repeats (PF0400); similar to WD-40 repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana] 3 1 19 12 At4g29770 expressed protein 3 1 19 13 At4g29920 heat shock protein-related contains similarity to heat shock protein 101 [Triticum aestivum] gi|6013196|gb|AAF01280 3 1 19 14 At4g29980 expressed protein 3 1 19 15 At4g32480 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 3 1 19 16 At4g32540 flavin-containing monooxygenase / FMO (YUCCA) identical to gi:16555352 3 1 19 17 At4g32670 expressed protein ; expression supported by MPSS 3 1 19 18 At4g32750 expressed protein 3 1 19 19 At4g32880 homeobox-leucine zipper transcription factor (HB-8) identical to HD-zip transcription factor (athb-8) (GI:7270235) [Arabidopsis thaliana] 3 1 19 20 At4g32915 expressed protein 3 1 19 21 At4g33070 "pyruvate decarboxylase, putative strong similarity to SP|P51846 Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) {Nicotiana tabacum}; contains InterPro entry IPR000399: Pyruvate decarboxylase" 3 1 19 22 At4g33130 expressed protein weak similarity to Max-interacting transcriptional repressor [Mus musculus] GI:1184157 3 1 19 23 AT5G57480 PC-1 A10 3 1 19 24 3XSSC PC-1 A22 3 1 19 25 AT1G29930 PC-1 E10 3 1 20 1 3XSSC PC-1 E22 3 1 20 2 AT3G44150 PC-1 I10 3 1 20 3 3XSSC PC-1 I22 3 1 20 4 AT4G00810 PC-1 M10 3 1 20 5 3XSSC PC-1 M22 3 1 20 6 At4g35730 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 1 20 7 At4g35785 "transformer serine/arginine-rich ribonucleoprotein, putative similar to transformer-SR ribonucleoprotein [Nicotiana tabacum] gi|1781299|emb|CAA70700" 3 1 20 8 At4g35920 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; isoform contains AT-acceptor splice site at intron 8" 3 1 20 9 At4g35980 expressed protein 3 1 20 10 At4g36100 "expressed protein contains Pfam domain, PF04859: Plant protein of unknown function (DUF641)" 3 1 20 11 At4g36150 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 20 12 At4g36360 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 3 1 20 13 At4g36400 "FAD linked oxidase family protein low similarity to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 3 1 20 14 At4g39040 expressed protein contains PF01985: Uncharacterised protein family 3 1 20 15 At4g39100 "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF01426: BAH domain" 3 1 20 16 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 3 1 20 17 At4g39270 "leucine-rich repeat transmembrane protein kinase, putative receptor protein kinase erecta, Arabidopsis thaliana" 3 1 20 18 At4g39400 brassinosteroid insensitive 1 (BRI1) identical to GI:2392895 3 1 20 19 At4g39460 mitochondrial substrate carrier family protein 3 1 20 20 At4g39620 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 20 21 At4g39675 expressed protein 3 1 20 22 At5g03180 "zinc finger (C3HC4-type RING finger) family protein various predicted proteins, Arabidopsis thaliana ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 20 23 At5g03240 polyubiquitin (UBQ3) identical to GI:928809 3 1 20 24 At5g03415 "DPB-1 transcription factor, putative (DPB) similar to Swiss-Prot:Q14186 transcription factor DP-1 [Homo sapiens]; contains Pfam profile PF02319: Transcription factor E2F/dimerisation partner (TDP)" 3 1 20 25 At5g03440 expressed protein 3 1 21 1 At5g03590 GDSL-motif lipase/hydrolase protein-related 3 1 21 2 At5g03650 "1,4-alpha-glucan branching enzyme / starch branching enzyme class II (SBE2-2) identical to starch branching enzyme class II [Arabidopsis thaliana] GI:726490" 3 1 21 3 At5g03830 "expressed protein hypothetical protein F4I1.32, Arabidopsis thaliana, PIR:T02406" 3 1 21 4 At5g03890 hypothetical protein 3 1 21 5 At5g06480 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 3 1 21 6 At5g06530 ABC transporter family protein 3 1 21 7 At5g06700 expressed protein strong similarity to unknown protein (emb|CAB82953.1) 3 1 21 8 At5g06750 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 3 1 21 9 At5g06920 hypothetical protein 3 1 21 10 At5g06980 expressed protein 3 1 21 11 At5g07120 phox (PX) domain-containing protein similar to SP|O60749 Sorting nexin 2 {Homo sapiens}; contains Pfam profile PF00787: PX domain 3 1 21 12 At5g07180 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 3 1 21 13 At5g10280 myb family transcription factor (MYB92) contains PFAM profile myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB92) GI:3941523 3 1 21 14 At5g10340 F-box protein-related / SLF-related contains weak hit to Pfam Pfam PF00646: F-box domain and to TIGRFAM TIGR01640 : F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 3 1 21 15 At5g10500 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 3 1 21 16 At5g10560 "glycosyl hydrolase family 3 protein beta-xylosidase, Aspergllus nidulans, EMBL:ANXLND" 3 1 21 17 At5g10710 expressed protein 3 1 21 18 At5g10745 expressed protein 3 1 21 19 At5g10920 "argininosuccinate lyase, putative / arginosuccinase, putative similar to argininosuccinate lyase [Nostoc punctiforme] GI:7672743; contains Pfam profile PF00206: Lyase" 3 1 21 20 At5g10980 "histone H3 identical to HISTONE H3.2, MINOR, Medicago sativa, SWISSPROT:P11105, histone H3 variant H3.3 Lycopersicon esculentum GI:1435157; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 3 1 21 21 At5g14100 "ABC transporter family protein contains similarity to ABC transporter, ATP-binding protein" 3 1 21 22 At5g14150 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 3 1 21 23 At5g14330 expressed protein 3 1 21 24 At5g14390 expressed protein 3 1 21 25 At5g14550 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 3 1 22 1 At5g14590 "isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative strong similarity to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] GI:3021512; contains Pfam domain PF00180: dehydrogenase, isocitrate/isopropylmalate family" 3 1 22 2 At5g14770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 22 3 At5g14850 "mannosyltransferase, putative similar to PIGB from Homo sapiens [gi:1552169], Mus musculus [gi:7634741]" 3 1 22 4 At5g17530 phosphoglucosamine mutase family protein low similarity to phosphoglucomutase/phosphomannomutase [Sphingomonas paucimobilis] GI:6103619; contains InterPro accession IPR006352: Phosphoglucosamine mutase 3 1 22 5 At5g17570 tatD-related deoxyribonuclease family protein contains Pfam profile PF01026: TatD related DNase 3 1 22 6 At5g17730 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 3 1 22 7 At5g17770 NADH-cytochrome b5 reductase identical to NADH-cytochrome b5 reductase [Arabidopsis thaliana] GI:4240116 3 1 22 8 At5g17960 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 1 22 9 At5g18020 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 3 1 22 10 At5g18170 glutamate dehydrogenase 1 (GDH1) identical to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis thaliana] SWISS-PROT:Q43314 3 1 22 11 At5g18230 transcription regulator NOT2/NOT3/NOT5 family protein contains Pfam domain PF04153: NOT2 / NOT3 / NOT5 family 3 1 22 12 At5g20790 "expressed protein predicted protein, Arabidopsis thaliana" 3 1 22 13 At5g20860 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 22 14 At5g21010 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 3 1 22 15 At5g21070 expressed protein 3 1 22 16 At5g21900 expressed protein 3 1 22 17 At5g21960 "AP2 domain-containing transcription factor, putative similar to TINY (GI:1246403) [Arabidopsis thaliana]" 3 1 22 18 At5g22100 "RNA cyclase family protein contains Pfam profiles: PF01137 RNA 3'-terminal phosphate cyclase, PF05189 RNA 3-prime-terminal phosphate cyclase (RTC)" 3 1 22 19 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 3 1 22 20 At5g24780 vegetative storage protein 1 (VSP1) identical to SP|O49195 Vegetative storage protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 3 1 22 21 At5g24840 expressed protein contains Pfam profile PF02390: Putative methyltransferase 3 1 22 22 At5g25010 expressed protein ; expression supported by MPSS 3 1 22 23 At5g25070 expressed protein 3 1 22 24 At5g25250 expressed protein 3 1 22 25 At5g25290 F-box family protein contains F-box domain Pfam:PF00646 3 1 23 1 At5g25430 anion exchange protein family contains similarity to SWISS-PROT:P02730 anion transport protein (Anion exchange protein 1) [Human]{Homo sapiens} 3 1 23 2 At5g25470 expressed protein 3 1 23 3 At5g28463 hypothetical protein 3 1 23 4 At5g28500 "expressed protein predicted proteins, Arabidopsis thaliana and Synechocystis sp." 3 1 23 5 At5g28660 hypothetical protein 3 1 23 6 At5g28750 "thylakoid assembly protein, putative similar to thylakoid assembly 4 (tha4) protein [Pisum sativum] GI:4929305; contains Pfam profile PF02416: mttA/Hcf106 family" 3 1 23 7 At5g28900 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 3 1 23 8 At5g28960 hypothetical protein 3 1 23 9 At5g30495 expressed protein 3 1 23 10 At5g30490 expressed protein 3 1 23 11 At5g37478 Expressed protein 3 1 23 12 At5g37510 "NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644]" 3 1 23 13 At5g37690 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]" 3 1 23 14 At5g37760 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 3 1 23 15 At5g37940 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428], Arabidopsis thaliana" 3 1 23 16 At5g38000 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 3 1 23 17 At5g38170 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 3 1 23 18 At5g38220 expressed protein 3 1 23 19 At5g41080 glycerophosphoryl diester phosphodiesterase family protein weak similarity to SP|P37965 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) {Bacillus subtilis}; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 3 1 23 20 At5g41110 expressed protein ; expression supported by MPSS 3 1 23 21 At5g41300 receptor-like protein kinase-related contains weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]; contains Pfam profile: PF01657 Domain of unknown function DUF26 3 1 23 22 At5g41350 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 23 23 At5g41530 hypothetical protein similar to unknown protein (pir |T01544) 3 1 23 24 At5g41590 hypothetical protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 23 25 At5g41730 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 1 24 1 At5g41780 "myosin heavy chain-related weak similarity to M protein, serotype 5 precursor (SP:P02977) {Streptococcus pyogenes} and to Myosin heavy chain, non-muscle (SP:Q99323) (Zipper protein) (Myosin II) {Drosophila melanogaster}" 3 1 24 2 At5g44430 "plant defensin-fusion protein, putative (PDF1.2c) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 3 1 24 3 At5g44490 F-box family protein contains F-box domain Pfam:PF00646 3 1 24 4 At5g44640 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to Non-cyanogenic beta-glucosidase precursor (SP:P26204) [Trifolium repens] 3 1 24 5 At5g44700 "leucine-rich repeat transmembrane protein kinase, putative " 3 1 24 6 At5g44830 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 3 1 24 7 At5g44900 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 3 1 24 8 At5g45050 "disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat" 3 1 24 9 At5g45100 expressed protein 3 1 24 10 At5g47630 "acyl carrier family protein / ACP family protein similar to acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) from {Arabidopsis thaliana} SP|P53665, {Neurospora crassa} SP|P11943; contains Pfam profile PF00550: Phosphopantetheine attachment site" 3 1 24 11 At5g47680 expressed protein contains Pfam profile PF04243: Protein of unknown function (DUF425) 3 1 24 12 At5g47830 expressed protein 3 1 24 13 At5g47880 "eukaryotic peptide chain release factor subunit 1-1 (ERF1-1) identical to SP|Q39097 Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) {Arabidopsis thaliana}, eukaryotic release factor 1 homolog GI:1155261 from [Arabidopsis thaliana]; contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 3 1 24 14 At5g48060 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 3 1 24 15 At5g48120 expressed protein low similarity to MMS19 [Mus musculus] GI:14029390 3 1 24 16 At5g48290 heavy-metal-associated domain-containing protein strong similarity to farnesylated proteins ATFP4 [GI:4097549] and ATFP5 [GI:4097551]; contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 24 17 At5g48340 expressed protein 3 1 24 18 At5g51020 expressed protein similar to unknown protein (pir||S76207) 3 1 24 19 At5g51080 RNase H domain-containing protein low similarity to GAG-POL precursor [Oryza sativa (japonica cultivar-group)] GI:5902445; contains Pfam profile PF00075: RNase H 3 1 24 20 At5g51220 ubiquinol-cytochrome C chaperone family protein contains Pfam PF03981: Ubiquinol-cytochrome C chaperone 3 1 24 21 At5g51270 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 3 1 24 22 At5g51430 conserved oligomeric Golgi complex component-related / COG complex component-related contains weak similarity to Conserved oligomeric Golgi complex component 7 (Swiss-Prot:P83436) [Homo sapiens] 3 1 24 23 At5g51490 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 24 24 At5g51630 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 24 25 At5g51690 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthases from Solanum tuberosum [GI:520958], Triticum aestivum [GI:1173638]" 3 1 25 1 At5g54440 expressed protein 3 1 25 2 At5g54500 "quinone reductase, putative similar to 1,4-benzoquinone reductase [Phanerochaete chrysosporium][GI:4454993]; contains flavodoxin domain PF00258" 3 1 25 3 At5g54630 "zinc finger protein-related contains Prosite:PS00028 Zinc finger, C2H2 type, domain" 3 1 25 4 At5g54690 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 3 1 25 5 At5g54840 GTP-binding family protein similar to SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase spg1)(Sid3 protein) {Schizosaccharomyces pombe} 3 1 25 6 At5g54890 expressed protein 3 1 25 7 At5g55030 expressed protein 3 1 25 8 At5g55090 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 25 9 At5g57770 expressed protein 3 1 25 10 At5g57815 "cytochrome c oxidase subunit 6b, putative similar to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] gi|6518353|dbj|BAA87883" 3 1 25 11 At5g57950 "26S proteasome regulatory subunit, putative contains similarity to 26S proteasome non-ATPase subunit 9 SP:O00233 from [Homo sapiens]" 3 1 25 12 At5g58005 expressed protein 3 1 25 13 At5g58170 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to Glycerophosphoryl diester phosphodiesterase precursor (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (ImmunoglobulinD-binding protein) (IGD-binding protein) (SP:Q06282) {Haemophilus influenzae} 3 1 25 14 At5g58220 expressed protein 3 1 25 15 At5g58360 ovate family protein 69% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 3 1 25 16 At5g58390 "peroxidase, putative similar to peroxidase [Nicotiana tabacum] gi|5381253|dbj|BAA82306" 3 1 25 17 At5g60990 "DEAD/DEAH box helicase, putative (RH10) probable replication protein A1, Oryza sativa, EMBL:AF009179" 3 1 25 18 At5g61040 expressed protein 3 1 25 19 At5g61200 hypothetical protein 3 1 25 20 At5g61260 chromosome scaffold protein-related contains weak similarity to chromosome scaffold protein p85 [Moneuplotes crassus] gi|25990101|gb|AAN75020 3 1 25 21 At5g61410 "ribulose-phosphate 3-epimerase, chloroplast, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to SP|Q43157 Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) {Spinacia oleracea}; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family" 3 1 25 22 At5g61460 structural maintenance of chromosomes (SMC) family protein very strong similarity to SMC-like protein (MIM) [Arabidopsis thaliana] GI:5880614; contains Pfam profile PF02463: RecF/RecN/SMC N terminal domain 3 1 25 23 At5g61600 ethylene-responsive element-binding family protein contains similarity to ethylene responsive element binding factor 5 (AtERF5) (Swiss-Prot:O80341) [Arabidopsis thaliana]; contains Pfam PF00847: AP2 domain 3 1 25 24 At5g61650 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 3 1 26 1 At5g64390 KH domain-containing RNA-binding protein (HEN4) contains similarity to RNA-binding protein; identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404; contains Pfam domain PF00013: KH domain; identical to cDNA HEN4 (HEN4) GI:28261402 3 1 26 2 At5g64530 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM (no apical meristem) 3 1 26 3 At5g64580 AAA-type ATPase family protein similar to zinc dependent protease [Arabidopsis thaliana] GI:7650138; contains Pfam profile PF00004: ATPase AAA family 3 1 26 4 At5g64710 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 1 26 5 At5g64770 expressed protein 3 1 26 6 At5g64905 expressed protein 3 1 26 7 At5g64960 "cyclin-dependent kinase, putative / CDK, putative similar to cyclin dependent kinase C [Lycopersicon esculentum] gi|15215944|emb|CAC51391" 3 1 26 8 At5g67470 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 3 1 26 9 At5g67520 "adenylylsulfate kinase, putative similar to adenylylsulfate kinase, chloroplast precursor (APS kinase, Adenosine-5'phosphosulfate kinase, ATP adenosine-5'- phosphosulfate 3'-phosphotransferase) [Catharanthus roseus] SWISS-PROT:O49204" 3 1 26 10 At1g25155 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana)" 3 1 26 11 At1g73070 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558" 3 1 26 12 ath-MIR173 miRNA gene Arabidopsis thaliana miR173 stem-loop 3 1 26 13 ath-MIR156a miRNA gene Arabidopsis thaliana miR156a stem-loop 3 1 26 14 ath-MIR167b miRNA gene Arabidopsis thaliana miR167b stem-loop 3 1 26 15 ath-MIR169c miRNA gene Arabidopsis thaliana miR169c stem-loop 3 1 26 16 At3g43760 hypothetical protein 3 1 26 17 At3g43810 "calmodulin-7 (CAM7) almost identical to calmodulin GI:16227 from [Arabidopsis thaliana], SP|P59220 Calmodulin-7 {Arabidopsis thaliana}" 3 1 26 18 At3g44020 thylakoid lumenal P17.1 protein contains Pfam PF00684 : DnaJ central domain (4 repeats); SP:Q9LXV9; PMID:11719511; supported by EST AI997589. 3 1 26 19 At3g44090 F-box family protein contains F-box domain Pfam:PF00646 3 1 26 20 At3g44235 hypothetical protein 3 1 26 21 At3g44300 nitrilase 2 (NIT2) identical to SP|P32962 Nitrilase 2 (EC 3.5.5.1) {Arabidopsis thaliana} 3 1 26 22 At3g44510 expressed protein 3 1 26 23 At3g44570 hypothetical protein 3 1 26 24 Blank Blank 3 1 26 25 Blank Blank 3 2 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 2 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 2 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 3 2 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 3 2 1 5 atc06 Randomly generated negative control 3 2 1 6 atc12 Randomly generated negative control 3 2 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 1 8 atc02 Randomly generated negative control 3 2 1 9 At1g02730 "cellulose synthase family protein similar to cellulose synthase catalytic subunit [gi:13925881] from Nicotiana alata, cellulose synthase-4 [gi:9622880] from Zea mays" 3 2 1 10 At1g02800 "endo-1,4-beta-glucanase / cellulase (CEL2) identical to endo-1,4-beta glucanase; ATCEL2 GI:3132891 from [Arabidopsis thaliana]" 3 2 1 11 At1g02890 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to mitochondrial sorting protein 1 (MSP1) (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]" 3 2 1 12 At1g02950 "glutathione S-transferase, putative similar to glutathione-S-transferase GI:169887 from [Silene vulgaris]" 3 2 1 13 At1g03055 expressed protein 3 2 1 14 At1g03090 "methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) nearly identical to SP|Q42523 Methylcrotonyl-CoA carboxylase alpha chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase alpha subunit) {Arabidopsis thaliana}" 3 2 1 15 At1g03250 expressed protein 3 2 1 16 At1g03310 "isoamylase, putative / starch debranching enzyme, putative similar to isoamylase isoform 2 [Solanum tuberosum] GI:27728147, isoamylase from [Triticum aestivum] GI:17932898, [Hordeum vulgare] GI:21314275, [Oryza sativa] GI:3252794; contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain; ESTs gb|H36690, gb|AA712462, gb|AA651230 and gb|N95932 come from this gene" 3 2 1 17 At1g05990 "calcium-binding protein, putative strong similarity to calcium-binding protein [Lotus japonicus] GI:18413495; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 2 1 18 At1g06040 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger 3 2 1 19 At1g06170 basic helix-loop-helix (bHLH) family protein contains Pfam profile:PF00010 helix-loop-helix DNA-binding domain 3 2 1 20 At1g06210 "VHS domain-containing protein / GAT domain-containing protein weak similarity to SP|Q9UJY5 ADP-ribosylation factor binding protein GGA1 {Homo sapiens}; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 3 2 1 21 At1g06400 Ras-related GTP-binding protein (ARA-2) identical to Ras-related protein ARA-2 SP:P28185 from [Arabidopsis thaliana] 3 2 1 22 At1g06460 31.2 kDa small heat shock family protein / hsp20 family protein contains Pfam profile: PF00011 Hsp20/alpha crystallin family 3 2 1 23 At1g06640 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 3 2 1 24 At1g06680 photosystem II oxygen-evolving complex 23 (OEC23) JBC 14:211-238 (2002); identical to 23 kDa polypeptide of oxygen-evolving comlex (OEC) GB:CAA66785 GI:1769905 [Arabidopsis thaliana] 3 2 1 25 At1g09180 "GTP-binding protein, putative strong similarity to SP:Q01474 GTP-binding protein SAR1B and SP:O04834 GTP-binding protein SAR1A [Arabidopsis thaliana]" 3 2 2 1 At1g09240 "nicotianamine synthase, putative similar to nicotianamine synthase [Lycopersicon esculentum][GI:4753801], nicotianamine synthase 2 [Hordeum vulgare][GI:4894912]" 3 2 2 2 At1g09400 "12-oxophytodienoate reductase, putative similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]" 3 2 2 3 At1g09450 haspin-related similar to haspin (GI:9229937) {Mus musculus} and haploid germ cell-specific nuclear protein kinase (GI:13561418) {Mus musculus} 3 2 2 4 At1g09590 60S ribosomal protein L21 (RPL21A) Similar to L21 family of ribosomal protein; amino acid sequence is identical to F21M12.8 3 2 2 5 At1g09645 expressed protein 3 2 2 6 At1g09795 ATP phosphoribosyl transferase 2 (ATP-PRT2) identical to ATP phosphoribosyl transferase (AtATP-PRT2) [Arabidopsis thaliana] GI:6683619; supporting cDNA gi|6683618|dbj|AB025250.1| 3 2 2 7 At1g09830 "phosphoribosylamine--glycine ligase (PUR2) Identical to phosphoribosylamine--glycine ligase, chloroplast [precursor] SP:P52420 from [Arabidopsis thaliana]" 3 2 2 8 At1g12410 ATP-dependent Clp protease proteolytic subunit (ClpP2) identical to nClpP2 GI:5360589 from [Arabidopsis thaliana] 3 2 2 9 At1g12450 expressed protein 3 2 2 10 At1g12650 expressed protein similar to KED (GI:8096269) [Nicotiana tabacum]; similar to rRNA processing protein EBP2 (SP:P36049) [Saccharomyces cerevisiae] 3 2 2 11 At1g12725 hypothetical protein 3 2 2 12 At1g12870 S locus F-box-related / SLF-related contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 3 2 2 13 At1g12930 importin-related similar to late gestation lung 2 protein (GI:7274209) {Rattus norvegicus}; similar to Ran binding protein 13 (importin 13)) (GI:8133102) {Homo sapiens}; contains weak hit to Pfam PF03810: Importin-beta N-terminal domain 3 2 2 14 At1g13110 "cytochrome P450 71B7 (CYP71B7) identical to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis thaliana]; PF|00067 Cytochrome P450 family. ESTs gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541 come from this gene; identical to cDNA cytochrome P450 GI:1523795, ATCYP71B7" 3 2 2 15 At1g13170 "oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 3 2 2 16 At1g15820 "chlorophyll A-B binding protein, chloroplast (LHCB6) nearly identical to Lhcb6 protein [Arabidopsis thaliana] GI:4741960; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 3 2 2 17 At1g15870 mitochondrial glycoprotein family protein / MAM33 family protein similar to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 3 2 2 18 At1g16020 expressed protein 3 2 2 19 At1g16060 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 3 2 2 20 At1g16250 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 2 2 21 At1g16310 "cation efflux family protein contains cation efflux family protein domain, Pfam:PF01545" 3 2 2 22 At1g16470 "20S proteasome alpha subunit B (PAB1) (PRC3) identical to proteasome subunit alpha type 2 SP:O23708, GI:6093778; identical to cDNA proteasome subunit prc3 GI:2511573" 3 2 2 23 At1g16520 expressed protein 3 2 2 24 At1g19320 "pathogenesis-related thaumatin family protein similar to SP:P28493 Pathogenesis-related protein 5 precursor (PR-5) from [Arabidopsis thaliana], thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family" 3 2 2 25 At1g19380 expressed protein 3 2 3 1 At1g19530 expressed protein 3 2 3 2 At1g19610 "plant defensin-fusion protein, putative (PDF1.4) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to SWISS-PROT:P30224, Cysteine-rich antifungal protein 1 precursor (AFP1)[Arabidopsis thaliana]" 3 2 3 3 At1g19790 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 3 2 3 4 At1g19860 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 2 3 5 At1g20050 "C-8,7 sterol isomerase identical to C-8,7 sterol isomerase GI:11279073 from [Arabidopsis thaliana] (Plant Mol. Biol. 38 (5), 807-815 (1998))" 3 2 3 6 At1g20110 zinc finger (FYVE type) family protein contains Pfam profile: PF01363 FYVE zinc finger 3 2 3 7 At1g22885 expressed protein 3 2 3 8 At1g22910 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); similar to GB:AAC33496 3 2 3 9 At1g23060 expressed protein Location of EST gb|T22158 and gb|AA395675 3 2 3 10 At1g23090 "sulfate transporter, putative similar to sulfate transporter [Arabidopsis thaliana] GI:2285885; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain" 3 2 3 11 At1g23240 caleosin-related family protein similar to caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]; similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 3 2 3 12 At1g23300 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 3 2 3 13 At1g23440 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site 3 2 3 14 At1g23490 "ADP-ribosylation factor identical to SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 3 2 3 15 At1g27180 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 3 16 At1g27250 paired amphipathic helix repeat-containing protein weak similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 3 2 3 17 At1g27385 expressed protein 3 2 3 18 At1g27435 expressed protein 3 2 3 19 At1g27590 expressed protein similar to hypothetical protein GB:AAD45997 GI:5668770 from (Arabidopsis thaliana) 3 2 3 20 At1g27630 "cyclin family protein similar to cyclin T1 [Homo sapiens] GI:2981196; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 2 3 21 At1g27780 "Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 2 3 22 At1g27850 expressed protein similar to En/Spm-like transposon protein GB:AAB95292 GI:2088658 from [Arabidopsis thaliana] 3 2 3 23 At1g30780 F-box family protein 3 2 3 24 At1g30825 "actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family contains Pfam PF04045: Arp2/3 complex, 34kD subunit p34-Arc; similar to ARP2/3 complex 34 kDa subunit (P34-ARC) (Swiss-Prot:O96623) [Dictyostelium discoideum]; similar to ARP2/3 complex 34 kDa subunit (P34-ARC) (Actin-related protein 2/3 complex subunit 2) (Swiss-Prot:O15144) [Homo sapiens]" 3 2 3 25 At1g31010 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) 3 2 4 1 At1g31070 UDP-N-acetylglucosamine pyrophosphorylase-related low similarity to SP|P43123 UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) {Saccharomyces cerevisiae} 3 2 4 2 At1g31260 "metal transporter, putative (ZIP10) identical to putative metal transporter ZIP10 [Arabidopsis thaliana] gi|17385792|gb|AAL38436; similar to iron-regulated transporter 2 GB:AAD30549 GI:4836773 from [Lycopersicon esculentum]; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 2 4 3 At1g31320 LOB domain protein 4 / lateral organ boundaries domain protein 4 (LBD4) identical to SP|Q9SHE9 LOB domain protein 4 {Arabidopsis thaliana} 3 2 4 4 At1g31490 "transferase family protein contains similarity to anthranilate N-hydroxycinnamoyl benzoyltransferase GI:3288180, GI:2239091 from (Dianthus caryophyllus); contains Pfam profile PF02458 transferase family" 3 2 4 5 At1g31540 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 4 6 At1g34580 "monosaccharide transporter, putative similar to monosaccharide transporter 3 [Oryza sativa] GI:11991114, monosaccharide transporter [Nicotiana tabacum] GI:19885, monosaccharide transporter 1 [Oryza sativa] GI:11991110; contains Pfam profile PF00083: major facilitator superfamily protein" 3 2 4 7 At1g34670 myb family transcription factor similar to myb-related protein mixta GI:485867 from [Antirrhinum majus] 3 2 4 8 At1g35110 "Ulp1 protease family protein similar to At5g28170, At1g44880, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350 ; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 2 4 9 At1g35183 expressed protein ; expression supported by MPSS 3 2 4 10 At1g35410 hypothetical protein 3 2 4 11 At1g35490 bZIP family transcription factor 3 2 4 12 At1g35640 hypothetical protein 3 2 4 13 At1g35710 "leucine-rich repeat transmembrane protein kinase, putative similar to many predicted protein kinases" 3 2 4 14 At1g47330 expressed protein contains Pfam profile PF01595: Domain of unknown function 3 2 4 15 At1g47395 expressed protein 3 2 4 16 At1g47560 expressed protein 3 2 4 17 At1g47625 hypothetical protein this may be a pseudogene. No suitable start codon was identified. 3 2 4 18 At1g47790 F-box family protein contains Pfam:PF00646 F-box domain 3 2 4 19 At1g47820 expressed protein identical to hypothetical protein GB:AAF19740 GI:6634732 from [Arabidopsis thaliana] 3 2 4 20 At1g48030 "dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) identical to GB:AAF34795 [gi:12704696] from [Arabidopsis thaliana]" 3 2 4 21 At1g48090 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain 3 2 4 22 At1g51120 "AP2 domain-containing transcription factor, putative similar to DNA-binding protein RAV1 GI:3868857 from [Arabidopsis thaliana]" 3 2 4 23 At1g51190 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana]" 3 2 4 24 At1g51360 expressed protein 3 2 4 25 At1g51400 photosystem II 5 kD protein 100% identical to GI:4836947 (F5D21.10) 3 2 5 1 At1g51550 F-box family protein similar to F-box ZEITLUPE/FKF/LKP/ADAGIO proteins e.g. GI:13487068 from [Arabidopsis thaliana] 3 2 5 2 At1g51600 zinc finger (GATA type) family protein contains similarity to zinc-finger protein ZIM [Arabidopsis thaliana] gi|8918533|dbj|BAA97679; contains Pfam PF00320: GATA zinc finger 3 2 5 3 At1g51730 RWD domain-containing protein contains Pfam profile PF05773: RWD domain; similar to GCN2 eIF2alpha kinase (GI:6066585) [Mus musculus]; similar to GCN2beta (GI:10764163) [Mus musculus]; similar to RING finger protein 25 (RING finger protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]; similar to RING finger protein 25 (Swiss-Prot:Q96BH1) [Homo sapiens] 3 2 5 4 At1g51790 "leucine-rich repeat protein kinase, putative smilar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 5 5 At1g54400 heat shock family protein contains similarity to Swiss-Prot:P27397 18.0 kDa class I heat shock protein [Daucus carota] 3 2 5 6 At1g54460 expressed protein 3 2 5 7 At1g54640 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 3 2 5 8 At1g54720 early-responsive to dehydration protein-related / ERD protein-related similar to ERD6 protein [Arabidopsis thaliana] GI:3123712 3 2 5 9 At1g54860 expressed protein 3 2 5 10 At1g54923 hypothetical protein 3 2 5 11 At1g55080 expressed protein 3 2 5 12 At1g55150 "DEAD box RNA helicase, putative (RH20) similar to ethylene-responsive RNA helicase GI:5669638 from [Lycopersicon esculentum]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 2 5 13 At1g59640 basic helix-loop-helix (bHLH) family protein 3 2 5 14 At1g59680 F-box family protein similar to mDj6 GB:BAA88304 GI:6567123 from [Mus musculus]; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain and weak hit to Pfam PF00646: F-box domain 3 2 5 15 At1g59830 serine/threonine protein phosphatase PP2A-2 catalytic subunit (PP2A2) identical to SP|Q07099 Serine/threonine protein phosphatase PP2A-2 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 3 2 5 16 At1g59865 expressed protein 3 2 5 17 At1g60000 "29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative similar to 29 kDa ribonucleoprotein chloroplast precursor {Nicotiana sylvestris} SP|Q08935, SP|Q08937; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) contains an AG-donor site at intron." 3 2 5 18 At1g60070 "gamma-adaptin, putative similar to gamma-adaptin GI:2765190 from [Homo sapiens]; contains Pfam profiles PF01602: Adaptin N terminal region, PF02883: Adaptin C-terminal domain" 3 2 5 19 At1g60320 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 3 2 5 20 At1g60390 "BURP domain-containing protein / polygalacturonase, putative similar to polygalacturonase isoenzyme 1 beta subunit GI:170480 from [Lycopersicon esculentum]; contains Pfam profile PF03181: BURP domain" 3 2 5 21 At1g63245 "CLE14, putative CLAVATA3/ESR-Related 14 (CLE14)" 3 2 5 22 At1g63280 "serpin-related / serine protease inhibitor-related similar to protein zx [Hordeum vulgare subsp. vulgare] GI:19071, serpin [Triticum aestivum] GI:1885346" 3 2 5 23 At1g63460 "glutathione peroxidase, putative contains Pfam profile: PF00255 glutathione peroxidases" 3 2 5 24 At1g63530 hypothetical protein 3 2 5 25 At1g63670 expressed protein 3 2 6 1 At1g63710 "cytochrome P450, putative similar to cytochrome P450 GB:O23066 [Arabidopsis thaliana]" 3 2 6 2 At1g63855 expressed protein 3 2 6 3 At1g63930 expressed protein ; expression supported by MPSS 3 2 6 4 At1g66700 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 3 2 6 5 At1g66760 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 3 2 6 6 At1g66930 serine/threonine protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 2 6 7 At1g66970 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family 3 2 6 8 At1g67130 F-box family protein contains Pfam PF00646: F-box domain 3 2 6 9 At1g67190 F-box family protein 3 2 6 10 At1g67360 rubber elongation factor (REF) family protein contains Pfam profile: PF05755 rubber elongation factor protein (REF) 3 2 6 11 At1g67430 60S ribosomal protein L17 (RPL17B) similar to ribosomal protein GI:19101 from [Hordeum vulgare] 3 2 6 12 At1g70080 "terpene synthase/cyclase family protein similar to (+)-delta-cadinene synthase [Gossypium hirsutum][GI:8389329], sesquiterpene synthases [GI:11934937][Lycopersicon hirsutum], [GI:11934933][Lycopersicon esculentum]; contains Pfam profile: PF01397: Terpene synthase family" 3 2 6 13 At1g70120 hypothetical protein 3 2 6 14 At1g70290 "trehalose-6-phosphate synthase, putative similar to Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) from {Kluyveromyces lactis} SP|Q07158, {Saccharomyces cerevisiae} SP|Q00764; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 3 2 6 15 At1g70350 expressed protein 3 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 3 2 6 17 At1g70530 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 2 6 18 At1g70680 caleosin-related family protein similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 3 2 6 19 At1g70740 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 6 20 At1g73590 "auxin efflux carrier protein, putative (PIN1) identical to putative auxin efflux carrier protein; AtPIN1 [Arabidopsis thaliana] GI:4151319; contains Pfam profile PF03547: Auxin Efflux Carrier" 3 2 6 21 At1g73630 "calcium-binding protein, putative similar to calcium binding protein GI:14589311 from [Sesbania rostrata]; contains Pfam profile: PF00036 EF hand (4 copies)" 3 2 6 22 At1g73770 hypothetical protein 3 2 6 23 At1g73820 Ssu72-like family protein contains Pfam profile PF04722: Ssu72-like protein; similar to SSU72 protein (Swiss-Prot:P53538) [Saccharomyces cerevisiae] 3 2 6 24 At1g73980 phosphoribulokinase/uridine kinase family protein weak similarity to SP|Q59190 Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase) (Cytidine monophosphokinase) {Borrelia burgdorferi}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family 3 2 6 25 At1g74040 2-isopropylmalate synthase 1 (IMS1) identical to 2-isopropylmalate synthase (IMS1) [Arabidopsis thaliana] GI:12330687; identical to cDNA 2-isopropylmalate synthase (IMS1) GI:12330686 3 2 7 1 At1g74200 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591 disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 3 2 7 2 At1g74260 "AIR synthase-related family protein contains Pfam profiles: PF00586 AIR synthase related protein, N-terminal domain, PF02769 AIR synthase related protein, C-terminal domain" 3 2 7 3 AT5G57480 PC-1 B10 3 2 7 4 3XSSC PC-1 B22 3 2 7 5 AT1G29930 PC-1 F10 3 2 7 6 3XSSC PC-1 F22 3 2 7 7 AT3G44150 PC-1 J10 3 2 7 8 3XSSC PC-1 J22 3 2 7 9 AT4G00810 PC-1 N10 3 2 7 10 3XSSC PC-1 N22 3 2 7 11 At1g77050 "DEAD/DEAH box helicase, putative similar to RNA helicase GI:3776027 from [Arabidopsis thaliana]" 3 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 3 2 7 13 At1g77250 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 3 2 7 14 At1g77310 "wound-responsive protein, putative similar to wound-responsive protein 14.05 (GI:16506638) [Castanea sativa]" 3 2 7 15 At1g77480 "nucellin protein, putative similar to nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare] (nucellin: similar to aspartic protease and its specific expression in nucellar cells during degeneration)" 3 2 7 16 At1g77530 "O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase GB:O23760 [Clarkia breweri], [SP|Q00763] [Populus tremuloides]" 3 2 7 17 At1g77710 expressed protein similar to hypothetical protein GB:P34661 [Caenorhabditis elegans] 3 2 7 18 At1g77765 expressed protein ; expression supported by MPSS 3 2 7 19 At1g80310 expressed protein 3 2 7 20 At1g80370 "cyclin, putative similar to cyclin A2 [Lycopersicon esculentum] GI:5420276; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 2 7 21 At1g80520 expressed protein 3 2 7 22 At1g80580 ethylene-responsive element-binding family protein contains AP2 DNA-binding domain; similar to EREBP-3 (GI:1208496) [Nicotiana tabacum] 3 2 7 23 At1g80760 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 2 7 24 At1g80820 "cinnamoyl-CoA reductase, putative identical to CCR2 (GI:12407990), similar to cinnamoyl CoA reductase from Eucalyptus gunnii [GI:2058311]" 3 2 7 25 At1g80950 phospholipid/glycerol acyltransferase family protein low similarity to SP|Q59601 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) {Neisseria gonorrhoeae}; contains Pfam profile PF01553: Acyltransferase 3 2 8 1 At2g01050 hypothetical protein 3 2 8 2 At2g04020 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL6 (GI:15054390), EXL1 (GI:15054382) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 3 2 8 3 At2g04038 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 3 2 8 4 At2g04230 F-box family protein contains F-box domain Pfam:PF00646 3 2 8 5 At2g04300 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 8 6 At2g04480 hypothetical protein 3 2 8 7 At2g04540 "3-oxoacyl-[acyl-carrier-protein] synthase II, putative similar to Swiss-Prot:P56902 3-oxoacyl-[acyl-carrier-protein] synthase II (EC 2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II) [Rhizobium meliloti]" 3 2 8 8 At2g04750 "fimbrin-like protein, putative similar to fimbrin-like protein (ATFIM1) [Arabidopsis thaliana] GI:2905893; contains Pfam profile PF00307: Calponin homology (CH) domain" 3 2 8 9 At2g04810 F-box family protein contains F-box domain Pfam:PF00646 3 2 8 10 At2g11626 hypothetical protein 3 2 8 11 At2g11910 expressed protein 3 2 8 12 At2g12520 "hypothetical protein low similarity to protective antigen [Streptococcus pyogenes] GI:8996050, paramyosin [Anisakis simplex] GI:8117843" 3 2 8 13 At2g12875 hypothetical protein 3 2 8 14 At2g13360 "serine-glyoxylate aminotransferase-related similar to serine-glyoxylate aminotransferase (GI:21535798)[Methylobacterium dichloromethanicum; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V]" 3 2 8 15 At2g13510 hypothetical protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 3 2 8 16 At2g13760 hypothetical protein 3 2 8 17 At2g13820 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 2 8 18 At2g17130 isocitrate dehydrogenase subunit 2 / NAD+ isocitrate dehydrogenase subunit 2 nearly identical to NAD+ dependent isocitrate dehydrogenase subunit 2 [Arabidopsis thaliana] GI:1766048 3 2 8 19 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 8 20 At2g17360 40S ribosomal protein S4 (RPS4A) contains ribosomal protein S4 signature from residues 8 to 22 3 2 8 21 At2g17430 "seven transmembrane MLO family protein / MLO-like protein 7 (MLO7) identical to membrane protein Mlo7 [Arabidopsis thaliana] gi|14091584|gb|AAK53800; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 3 2 8 22 At2g17630 "phosphoserine aminotransferase, putative similar to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana]; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V" 3 2 8 23 At2g17680 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function; expression supported by MPSS 3 2 8 24 At2g17830 "F-box family protein contains Pfam domain, PF00646: F-box domain" 3 2 8 25 At2g17880 "DNAJ heat shock protein, putative similar to J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain" 3 2 9 1 At2g20625 hypothetical protein 3 2 9 2 At2g20660 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 3 2 9 3 At2g20800 pyridine nucleotide-disulphide oxidoreductase family protein similar to GI:3718005 alternative NADH-dehydrogenase {Yarrowia lipolytica} ; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase 3 2 9 4 At2g20820 expressed protein . 3 2 9 5 At2g20950 expressed protein 3 2 9 6 At2g21010 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 3 2 9 7 At2g21185 expressed protein 3 2 9 8 At2g21230 bZIP family transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036) 3 2 9 9 At2g24050 "MIF4G domain-containing protein / MA3 domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain" 3 2 9 10 At2g24120 "DNA-directed RNA polymerase, chloroplast (RPOPT) identical to SP|O24600 DNA-directed RNA polymerase, chloroplast precursor (EC 2.7.7.6) {Arabidopsis thaliana}" 3 2 9 11 At2g24290 expressed protein 3 2 9 12 At2g24350 "RNA recognition motif (RRM)-containing protein low similarity to poly(A) binding protein II from [Xenopus laevis] GI:11527140, [Mus musculus] GI:2351846, [Bos taurus] GI:1051125; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain" 3 2 9 13 At2g24530 expressed protein ; expression supported by MPSS 3 2 9 14 At2g24590 "splicing factor, putative similar to to RSZp22 protein [Arabidopsis thaliana] gi|2582645|emb|CAA05352" 3 2 9 15 At2g24765 ADP-ribosylation factor 3 (ARF3) identical to GP:453191 ADP-ribosylation factor 3 {Arabidopsis thaliana}; contains domain PF00025: ADP-ribosylation factor family 3 2 9 16 At2g24820 Rieske [2Fe-2S] domain-containing protein similar to Rieske iron-sulfur protein Tic55 from Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske [2Fe-2S] domain 3 2 9 17 At2g27510 "ferredoxin, putative similar to non-photosynthetic ferredoxin from Citrus sinensis [GI:1360725], Ferredoxin, root R-B2 from Raphanus sativus [SP|P14937]; contains Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding domain" 3 2 9 18 At2g27570 "sulfotransferase family protein similar to steroid sulfotransferase from [Brassica napus] GI:3420008, GI:3420006; contains Pfam profile PF00685: Sulfotransferase domain" 3 2 9 19 At2g27740 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 3 2 9 20 At2g27775 expressed protein 3 2 9 21 At2g27950 expressed protein 3 2 9 22 At2g28010 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 2 9 23 At2g28160 basic helix-loop-helix (bHLH) family protein 3 2 9 24 At2g28220 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 2 9 25 At2g30942 expressed protein 3 2 10 1 At2g30990 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 3 2 10 2 At2g31140 expressed protein 3 2 10 3 At2g31200 actin-depolymerizing factor 6 (ADF6) identical to SP|Q9ZSK2 Actin-depolymerizing factor 6 (ADF-6) (AtADF6) {Arabidopsis thaliana} 3 2 10 4 At2g31350 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme [Arabidopsis thaliana] gi|2570338|gb|AAC49865" 3 2 10 5 At2g31390 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 3 2 10 6 At2g31560 expressed protein 3 2 10 7 At2g31600 expressed protein 3 2 10 8 At2g34230 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 2 10 9 At2g34270 hypothetical protein and genscan 3 2 10 10 At2g34390 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; an isoform contains a non-consensus GA-AG intron 3 2 10 11 At2g34420 chlorophyll A-B binding protein / LHCII type I (LHB1B2) identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16364 3 2 10 12 At2g34570 "expressed protein contains Pfam profile: PF04900 protein of unknown function, DUF652" 3 2 10 13 At2g34620 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 2 10 14 At2g34800 hypothetical protein 3 2 10 15 At2g34860 chaperone protein dnaJ-related contains Pfam PF00684 : DnaJ central domain (4 repeats); similar to Chaperone protein dnaJ (Heat shock protein 40) (SP:Q9UXR9) {Methanosarcina thermophila} 3 2 10 16 At2g37440 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 2 10 17 At2g37500 arginine biosynthesis protein ArgJ family contains Pfam profile: PF01960 ArgJ family 3 2 10 18 At2g37650 "scarecrow-like transcription factor 9 (SCL9) identical to cDNA scarecrow-like 9 (SCL9) mRNA, partial cds GI:4580524" 3 2 10 19 At2g37710 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 3 2 10 20 At2g37860 expressed protein 3 2 10 21 At2g37920 expressed protein 3 2 10 22 At2g38070 expressed protein and genscan 3 2 10 23 At2g38130 "GCN5-related N-acetyltransferase, putative similar to SP|Q03503 L-A virus GAG protein N-acetyltransferase (EC 2.3.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 3 2 10 24 At2g40670 two-component responsive regulator / response regulator 16 (ARR16) identical to response regulator 16 GI:11870067 from [Arabidopsis thaliana] 3 2 10 25 At2g40730 HEAT repeat-containing protein contains INTERPRO:IPR000357 HEAT repeat 3 2 11 1 At2g40880 "cysteine protease inhibitor, putative / cystatin, putative (FL3-27) similar to PRLI-interacting factor M [Arabidopsis thaliana] GI:11139270, cysteine proteinase inhibitor [Brassica rapa] GI:762785; contains Pfam profile PF00031: Cystatin domain" 3 2 11 2 At2g40920 "F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein family, AtFBX8 (GP:20197464) {Arabidopsis thaliana}|502017|gb|T20576.1|T20576" 3 2 11 3 At2g41050 PQ-loop repeat family protein / transmembrane family protein similar to SP|Q10482 Seven transmembrane protein 1 {Schizosaccharomyces pombe}; contains Pfam profile PF04193: PQ loop repeat 3 2 11 4 At2g41100 "touch-responsive protein / calmodulin-related protein 3, touch-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana]" 3 2 11 5 At2g41250 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q94915 Rhythmically expressed gene 2 protein (DREG-2) {Drosophila melanogaster}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 2 11 6 At2g41330 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 3 2 11 7 At2g43930 protein kinase family protein contains similarity to NPK1-related protein kinase 2 GI:2342425 from [Arabidopsis thaliana] 3 2 11 8 At2g43950 expressed protein 3 2 11 9 At2g44070 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q63186 Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family 3 2 11 10 At2g44120 60S ribosomal protein L7 (RPL7C) 3 2 11 11 At2g44280 expressed protein 3 2 11 12 At2g44350 "citrate synthase, mitochondrial, putative strong similarity to SP|P20115 Citrate synthase, mitochondrial precursor {Arabidopsis thaliana}; contains Pfam profile PF00285: Citrate synthase" 3 2 11 13 At2g44510 p21Cip1-binding protein-related similar to p21Cip1-binding protein TOK-1beta (GI:7339688) [Homo sapiens]; similar to BRCA2 and Cip1/p21 interacting protein (GI:25989375) [Homo sapiens] 3 2 11 14 At2g44560 glycosyl hydrolase family 9 protein 3 2 11 15 At2g47230 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 2 11 16 At2g47290 hypothetical protein 3 2 11 17 At2g47460 myb family transcription factor (MYB12) similar to myb-related DNA-binding protein GI:1020155 from [Arabidopsis thaliana] 3 2 11 18 At2g47490 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 2 11 19 At2g47650 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains non-consensus AT donor splice site at exon 1 and non-consensus AC acceptor splice site at exon 2 3 2 11 20 At2g47710 universal stress protein (USP) family protein similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family 3 2 11 21 At2g47880 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 3 2 11 22 At2g47910 expressed protein 3 2 11 23 At3g03240 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 3 2 11 24 At3g03280 expressed protein 3 2 11 25 At3g03450 "gibberellin response modulator, putative / gibberellin-responsive modulator, putative similar to GAI (GI:2569938), RGA1 (GB:AAC67333) and RGA2 (GI:2339980) [Arabidopsis thaliana]; possible involvement in nitrogen metabolism" 3 2 12 1 At3g03510 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 3 2 12 2 At3g03690 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 3 2 12 3 At3g03750 "SET domain-containing protein low similarity to G9a [Homo sapiens] GI:287865; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif" 3 2 12 4 At3g03890 expressed protein 3 2 12 5 At3g03930 protein kinase-related similar to serine/threonine protein kinase [Chlamydomonas reinhardtii] GI:18139937 3 2 12 6 At3g06450 "anion exchange family protein similar to putative Anion exchanger family members: GB:AAD39673, GB:AAD55295 [Arabidopsis thaliana]" 3 2 12 7 At3g06490 myb family transcription factor (MYB108) identical to transcription factor MYB108 GI:15375290 from [Arabidopsis thaliana] 3 2 12 8 At3g06630 "protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain, PF00989 PAS domain, and PF00785 PAC motif" 3 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 3 2 12 10 At3g06780 glycine-rich protein 3 2 12 11 At3g06850 branched chain alpha-keto acid dehydrogenase E2 subunit (din3) identical to branched chain alpha-keto acid dehydrogenase E2 subunit (din3) [Arabidopsis thaliana] GI:7021284 3 2 12 12 At3g07010 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 3 2 12 13 At3g07060 expressed protein ; expression supported by MPSS 3 2 12 14 At3g10100 "filament protein-related similar to YEAST NUF1 protein (Spindle poly body spacer protein SPC110) (SP:P32380) {Saccharomyces cerevisiae}; similar to Myosin heavy chain, smooth muscle isoform (SMMHC) (SP:P35749) {Homo sapiens}" 3 2 12 15 At3g10140 recA family protein contains Pfam profile: PF00154 recA bacterial DNA recombination protein 3 2 12 16 At3g10300 calcium-binding EF hand family protein low similarity to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 2 12 17 At3g10340 "phenylalanine ammonia-lyase, putative similar to phenylalanine ammonia-lyase GB:S48726 [Petroselinum crispum]" 3 2 12 18 At3g10490 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 3 2 12 19 At3g10525 expressed protein 3 2 12 20 At3g10650 expressed protein 3 2 12 21 At3g10710 pectinesterase family protein contains similarity to pectinesterase GB:AAB57671 [Citrus sinensis]; contains Pfam profile: PF01095 pectinesterase 3 2 12 22 At3g13140 hydroxyproline-rich glycoprotein family protein 3 2 12 23 At3g13190 "myosin heavy chain-related contains weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P05659) [Acanthamoeba castellanii]" 3 2 12 24 At3g13275 expressed protein supported by Brassica genomic sequence alignment and EST/cDNA sequences. 3 2 12 25 At3g13330 expressed protein 3 2 13 1 At3g13490 "tRNA synthetase class II (D, K and N) family protein similar to SP|Q9RHV9 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Bacillus stearothermophilus}; contains Pfam profile: PF00152 tRNA synthetases class II (D, K and N)" 3 2 13 2 At3g13550 ubiquitin-conjugating enzyme (COP10) identical to ubiquitin-conjugating enzyme COP10 [Arabidopsis thaliana] GI:20065779; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 3 2 13 3 At3g13672 seven in absentia (SINA) family protein low similarity to SP|P21461 Developmental protein seven in absentia {Drosophila melanogaster}; contains Pfam profile PF03145: Seven in absentia protein family 3 2 13 4 At3g13710 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor [Mus musculus] GI:7716652; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 3 2 13 5 At3g16175 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 3 2 13 6 At3g16230 expressed protein similar to ASC-1 complex subunit P50 (GI:12061189) [Homo sapiens] 3 2 13 7 At3g16410 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, epithiospecifier [Arabidopsis thaliana] GI:16118845; contains Pfam profiles PF01419 jacalin-like lectin family, PF01344 Kelch motif" 3 2 13 8 At3g16470 jacalin lectin family protein contains Pfam profile: PF01419 jacalin-like lectin domain; similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767 3 2 13 9 At3g16600 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P31244 DNA repair protein RAD16 {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 2 13 10 At3g16660 expressed protein 3 2 13 11 At3g16820 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 2 13 12 At3g16860 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region 3 2 13 13 At3g19510 homeobox protein (HAT 3.1) identical to homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis thaliana] 3 2 13 14 At3g19550 expressed protein 3 2 13 15 At3g19700 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich receptor-like protein kinase GB:AAC36318 from [Malus domestica]; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 13 16 At3g19760 "eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative contains DEAD/DEAH helicase domain; similar to RNA helicase GB:CAA09195 from [Arabidopsis thaliana]; identical to cDNA DEAD box RNA helicase, RH2 GI:3775984" 3 2 13 17 At3g19930 sugar transport protein (STP4) identical to GB:S25009 GI:16524 from [Arabidopsis thaliana] 3 2 13 18 At3g19990 expressed protein 3 2 13 19 At3g20130 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 3 2 13 20 At3g20180 hypothetical protein 3 2 13 21 At3g22900 "RNA polymerase Rpb7 N-terminal domain-containing protein weak similarity to SP|P52433 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RPB7) {Rattus norvegicus}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 3 2 13 22 At3g22950 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor GB:P91924 [Dugesia japonica]" 3 2 13 23 At3g23110 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 3 2 13 24 At3g23170 expressed protein 3 2 13 25 At3g23300 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 2 14 1 At3g23350 expressed protein ; expression supported by MPSS 3 2 14 2 At3g23560 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 3 2 14 3 At3g23610 "dual specificity protein phosphatase (DsPTP1) identical to DsPTP1 protein GI:4150963 from [Arabidopsis thaliana]; contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 3 2 14 4 At3g26445 glycosyl transferase family 17 protein contains Pfam profile PF04724: Glycosyltransferase family 17 3 2 14 5 At3g26500 leucine-rich repeat family protein 3 2 14 6 At3g26640 "transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to ATAN11 (GI:2290528) [Arabidopsis thaliana] (Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam profile: PF00400 WD domain, G-beta repeat (3 copies)" 3 2 14 7 At3g26670 expressed protein 3 2 14 8 At3g26810 "transport inhibitor response protein, putative E3 ubiquitin ligase SCF complex F-box subunit; similar to transport inhibitor response 1 GI:2352492 from [Arabidopsis thaliana]" 3 2 14 9 At3g26850 expressed protein 3 2 14 10 At3g27000 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin 3 2 14 11 At3g27050 expressed protein 3 2 14 12 At3g29970 germination protein-related similar to HvB12D [Hordeum vulgare subsp. vulgare] gi|471319|emb|CAA54065 3 2 14 13 At3g30210 myb family transcription factor (MYB121) contains Pfam profile: PF00249 Myb-like DNA-binding domain (2 copies) 3 2 14 14 At3g30430 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 2 14 15 At3g30490 hypothetical protein 3 2 14 16 At3g30700 hypothetical protein 3 2 14 17 At3g30750 hypothetical protein 3 2 14 18 At3g31350 hypothetical protein 3 2 14 19 At3g31430 hypothetical protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 3 2 14 20 At3g44716 hypothetical protein 3 2 14 21 At3g44755 hypothetical protein 3 2 14 22 At3g44910 "cation/hydrogen exchanger, putative (CHX12) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 3 2 14 23 At3g44960 expressed protein ; expression supported by MPSS 3 2 14 24 At3g45110 hypothetical protein 3 2 14 25 At3g45170 "zinc finger (GATA type) family protein contains GATA-type zinc finger domain, INTERPRO:IPR000679" 3 2 15 1 At3g45380 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 2 15 2 At3g45440 "lectin protein kinase family protein contains Legume lectins beta-chain signature, PROSITE:PS00307 and PS00108: Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 3 2 15 3 At3g48250 pentatricopeptide (PPR) repeat-containing protein vacontains Pfam profile PF01535: PPR repeat 3 2 15 4 At3g48310 "cytochrome P450 71A22, putative (CYP71A22) Identical to Cytochrome P450 71A22 (SP:Q9STL1)[Arabidopsis thaliana]" 3 2 15 5 At3g48480 hypothetical protein 3 2 15 6 At3g48540 cytidine/deoxycytidylate deaminase family protein similar to SP|P32321 Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase) {Homo sapiens}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 3 2 15 7 At3g48720 "transferase family protein similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum,PIR2:T03274; contains Pfam transferase family domain PF00248" 3 2 15 8 At3g48780 "serine C-palmitoyltransferase, putative similar to serine palmitoyltransferase from Solanum tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus musculus [SP|P97363]" 3 2 15 9 At3g48940 "remorin family protein contains Pfam domain, PF03766: Remorin, N-terminal region and Pfam domain, PF03763: Remorin, C-terminal region" 3 2 15 10 At3g49000 RNA polymerase III subunit RPC82 family protein contains Pfam profile: PF05645 RNA polymerase III subunit RPC82 3 2 15 11 At3g51850 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 3 2 15 12 At3g51890 "expressed protein protein At2g40060 - Arabidopsis thaliana, EMBL:AF002109" 3 2 15 13 At3g52050 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 3 2 15 14 At3g52070 expressed protein 3 2 15 15 At3g52220 expressed protein 3 2 15 16 At3g52260 pseudouridine synthase family protein similar to SP|P39219 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 3 2 15 17 At3g52430 phytoalexin-deficient 4 protein (PAD4) identical to phytoalexin-deficient 4 protein [Arabidopsis thaliana] GI:6457331; contains Pfam profile PF01764: Lipase 3 2 15 18 At3g52490 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 3 2 15 19 At3g55005 tonneau 1b (TON1b) identical to tonneau 1b (TON1b) GI:11494366 from [Arabidopsis thaliana] 3 2 15 20 At3g55050 serine/threonine protein phosphatase 2C (PP2C6) identical to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; contains TIGRFAM TIGR01573 : CRISPR-associated protein Cas2 3 2 15 21 At3g55210 no apical meristem (NAM) protein-related contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana} 3 2 15 22 At3g55270 MAP kinase phosphatase (MKP1) identical to MAP kinase phosphatase (MKP1) GI:13540262 from [Arabidopsis thaliana] 3 2 15 23 At3g55450 "protein kinase, putative similar to protein kinase APK1B [Arabidopsis thaliana] SWISS-PROT:P46573" 3 2 15 24 At3g55520 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative POSSIBLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8) (PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP BINDING IMMUNOPHILIN), rabbit, SWISSPROT:P27124:FKB4_RABBIT" 3 2 15 25 At3g55690 "expressed protein predicted proteins, Arabidopsis thaliana" 3 2 16 1 At3g55740 proline transporter 2 (ProT2) identical to proline transporter 2 GI:1769903 from [Arabidopsis thaliana] 3 2 16 2 At3g58600 "expressed protein hypothetical protein F21M11.17 - Arabidopsis thaliana, EMBL:AC003027" 3 2 16 3 At3g58660 60S ribosomal protein-related contains weak similarity to 60S ribosomal protein L10A (CSA-19) (NEDD-6) (Swiss-Prot:P53026) [Mus musculus] 3 2 16 4 At3g58830 "haloacid dehalogenase (HAD) superfamily protein contains TIGRfam TIGR01668: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 and TIGR01662: hydrolase, HAD-superfamily, subfamily IIIA" 3 2 16 5 At3g58890 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g59270,At1g56610, At3g54160, At1g47920 (syntaxin SYP81),, At5g41830, At3g44180, At1g48390 [Arabidopsis thaliana]" 3 2 16 6 At3g59060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 2 16 7 At3g59100 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 3 2 16 8 At3g59280 "signaling molecule-related contains similarity to mitochondria-associated granulocyte macrophage CSF signaling molecule, mitochondrial precursor (CGI-136) [Mus musculus] SWISS-PROT:Q9CQV1" 3 2 16 9 At3g59320 "integral membrane protein, putative contains Pfam profile PF00892: Integral membrane protein; identical to anthocyanin-related membrane protein 2 (GI:16416385) [Arabidopsis thaliana]" 3 2 16 10 At3g61990 O-methyltransferase family 3 protein several O-methyltransferases - different species; contains Pfam 01596 O-methyltransferase domain 3 2 16 11 At3g62030 "peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) identical to peptidyl-prolyl cis-trans isomerase, chloroplast precursor, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34791; identical to cDNA nuclear-encoded chloroplast stromal cyclophilin (ROC4) GI:405130" 3 2 16 12 At3g62210 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 3 2 16 13 At3g62270 "anion exchange family protein contains similarity to anion exchanger 3, cardiac splice form - Rattus norvegicus, PIR:A42497" 3 2 16 14 At3g62430 F-box family protein contains F-box domain Pfam:PF00646 3 2 16 15 At3g62490 expressed protein hypothetical proteins - Arabidopsis thaliana 3 2 16 16 At3g62660 "glycosyl transferase family 8 protein low similarity to glycosyl transferase lgtC - Neisseria gonorrhoeae, EMBL:AF208062; contains Pfam glycosyl transferase family 8 domain PF01501" 3 2 16 17 At3g62720 "galactosyl transferase GMA12/MNN10 family protein low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 3 2 16 18 At4g01595 "mitogen-activated protein kinase, putative (MPK9) contains similarity to MAP kinases" 3 2 16 19 At4g01640 hypothetical protein 3 2 16 20 At4g01790 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein / ribonuclease P-related similar to human RNaseP-associate protein P38, GenBank accession number U77664" 3 2 16 21 At4g01850 "S-adenosylmethionine synthetase 2 (SAM2) identical to S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2, AdoMet synthetase 2) [Arabidopsis thaliana] SWISS-PROT:P17562" 3 2 16 22 At4g01970 "galactinol-raffinose galactosyltransferase, putative similar to galactinol-raffinose galactosyltransferase GI:6634701 from [Vigna angularis]" 3 2 16 23 At4g02010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 16 24 At4g02170 expressed protein ; expression supported by MPSS 3 2 16 25 At4g02200 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 3 2 17 1 At4g05145 hypothetical protein 3 2 17 2 At4g05200 protein kinase family protein contains Prosite:PS00108: Serine/Threonine protein kinases active-site signature 3 2 17 3 At4g05370 hypothetical protein 3 2 17 4 At4g05430 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 3 2 17 5 At4g05620 F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF00646: F-box domain 3 2 17 6 At4g05640 hypothetical protein 3 2 17 7 At4g07310 "hypothetical protein similar to At2g10840, At5g35280, At2g10500, At2g05860, At4g07430, At1g39270" 3 2 17 8 At4g07410 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400) (2 weak); similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina} 3 2 17 9 At4g10560 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 2 17 10 At4g10610 "RNA-binding protein, putative " 3 2 17 11 At4g10790 UBX domain-containing protein low similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1 protein) {Homo sapiens}; contains Pfam profile PF00789: UBX domain 3 2 17 12 At4g10840 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515 TPR Domain 3 2 17 13 At4g10970 expressed protein 3 2 17 14 At4g11030 "long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative similar to acyl-CoA synthetase (MF7P) gi:1617270 from Brassica napus" 3 2 17 15 At4g11180 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 2 17 16 At4g11230 "respiratory burst oxidase, putative / NADPH oxidase, putative similar to respiratory burst oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868] from Arabidopsis thaliana, respiratory burst oxidase homolog [GI:16549087] from Solanum tuberosum; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 3 2 17 17 At4g13970 expressed protein 3 2 17 18 At4g14020 rapid alkalinization factor (RALF) family protein 3 2 17 19 At4g14160 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 3 2 17 20 At4g14200 expressed protein 3 2 17 21 At4g14330 phragmoplast-associated kinesin-related protein 2 (PAKRP2) identical to cDNA phragmoplast-associated kinesin-related protein 2 (PAKRP2) GI:16973450 3 2 17 22 At4g14370 "disease resistance protein (TIR-NBS-LRR class), putative similar to zinc finger protein (GI:15811367) [Arabidopsis thaliana]; similar to TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar to disease resistance protein RPP1-WsB (GI:3860165) [Arabidopsis thaliana]" 3 2 17 23 At4g14500 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 3 2 17 24 At4g14540 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to LEC1-like protein (GI:22536010) [Phaseolus coccineus] 3 2 17 25 At4g16920 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 18 1 At4g16960 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 18 2 At4g17120 expressed protein 3 2 18 3 At4g17180 glycosyl hydrolase family 17 protein similar to 3-glucanase GI:18483232 from [Sorghum bicolor] 3 2 18 4 At4g17340 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 2 18 5 At4g17410 expressed protein 3 2 18 6 At4g17565 F-box family protein contains F-box domain Pfam:PF00646 3 2 18 7 At4g17610 "tRNA/rRNA methyltransferase (SpoU) family protein similar to TAR RNA loop binding protein [Homo sapiens] GI:1184692; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 3 2 18 8 At4g20190 hypothetical protein 3 2 18 9 At4g20250 hypothetical protein 3 2 18 10 At4g20410 gamma-soluble NSF attachment protein / gamma-SNAP identical to gamma-soluble NSF attachment protein; gamma-SNAP [Arabidopsis thaliana] GI:6013206 3 2 18 11 At4g20450 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 18 12 At4g20760 short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profile: PF00106 short chain dehydrogenase 3 2 18 13 At4g20820 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 2 18 14 At4g21000 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 3 2 18 15 At4g21060 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 3 2 18 16 At4g23630 reticulon family protein (RTNLB1) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon 3 2 18 17 At4g23680 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 3 2 18 18 At4g23860 "PHD finger protein-related similar to Pfam profiles PF02207: Putative zinc finger in N-recognin, weak hit to PF00628: PHD-finger" 3 2 18 19 At4g23895 pleckstrin homology (PH) domain-containing protein-related 3 2 18 20 At4g24040 "glycosyl hydrolase family protein 37 / trehalase, putative similar to trehalase 1 GMTRE1 GI:4559292 from [Glycine max]" 3 2 18 21 At4g24100 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 2 18 22 At4g24260 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-1,4-beta-D-glucanase; cellulase GI:5689613 from [Brassica napus]" 3 2 18 23 At4g24280 "heat shock protein 70, putative / HSP70, putative strong similarity to heat shock protein 70 [Arabidopsis thaliana] GI:6746592; similar to heat shock 70 protein - Spinacia oleracea,PID:g2654208" 3 2 18 24 At4g26860 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 3 2 18 25 At4g26910 "2-oxoacid dehydrogenase family protein similar to SP|P36957 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) {Homo sapiens}; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme" 3 2 19 1 At4g27060 expressed protein 3 2 19 2 At4g27120 expressed protein 3 2 19 3 At4g27300 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 3 2 19 4 At4g27360 "dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 3 2 19 5 At4g27520 plastocyanin-like domain-containing protein similar to PIR|JC7196 phytocyanin-related protein Pn14 {Ipomoea nil}; contains Pfam profile PF02298: Plastocyanin-like domain 3 2 19 6 At4g27580 expressed protein 3 2 19 7 At4g30150 expressed protein 3 2 19 8 At4g30200 "expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1|" 3 2 19 9 At4g30350 heat shock protein-related contains similarity to heat shock protein 101 [Triticum aestivum] gi|6013196|gb|AAF01280 3 2 19 10 At4g30410 expressed protein similar to cDNA bHLH transcription factor (bHLH eta gene) gi:32563007 3 2 19 11 At4g30540 glutamine amidotransferase class-I domain-containing protein similar to defense-related protein [Brassica carinata] GI:14009290; contains Pfam profile PF00117: glutamine amidotransferase class-I 3 2 19 12 At4g30600 "signal recognition particle receptor alpha subunit family protein similar to Signal recognition particle receptor alpha subunit (SR-alpha) (Docking protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens}; similar to Signal recognition particle receptor alpha subunit (SR-alpha) (Docking protein alpha) (DP-alpha) (SP:P06625) [Canis familiaris}; contains Pfam PF04086: Signal recognition particle, alpha subunit, N-terminal; contains Pfam PF00448: SRP54-type protein, GTPase domain" 3 2 19 13 At4g30760 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 2 19 14 At4g30810 serine carboxypeptidase S10 family protein similar to serine-type carboxypeptidase (SP:P55748) [Hordeum vulgare] 3 2 19 15 At4g33300 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 19 16 At4g33360 terpene cyclase/mutase-related low similarity to squalene-hopene cyclase from Zymomonas mobilis [SP|P33990] 3 2 19 17 At4g33520 "metal-transporting P-type ATPase, putative (PAA1) nearly identical to gi:2668492; contains Pfam heavy-metal-associated domain PF00403" 3 2 19 18 At4g33565 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 2 19 19 At4g33720 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 3 2 19 20 At4g33780 expressed protein 3 2 19 21 At4g33925 expressed protein 3 2 19 22 At4g33970 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 2 19 23 AT5G57480 PC-1 B10 3 2 19 24 3XSSC PC-1 B22 3 2 19 25 AT1G29930 PC-1 F10 3 2 20 1 3XSSC PC-1 F22 3 2 20 2 AT3G44150 PC-1 J10 3 2 20 3 3XSSC PC-1 J22 3 2 20 4 AT4G00810 PC-1 N10 3 2 20 5 3XSSC PC-1 N22 3 2 20 6 At4g36530 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Sphingomonas sp.] GI:3426124; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 2 20 7 At4g36570 myb family transcription factor conatins PFAM profile: PF00249 myb-like DNA binding domain 3 2 20 8 At4g36720 "abscisic acid-responsive HVA22 family protein low similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 3 2 20 9 At4g36760 aminopeptidase P similar to Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 3 2 20 10 At4g36920 floral homeotic protein APETALA2 (AP2) Identical to (SP:P47927) Floral homeotic protein APETALA2. [Mouse-ear cress] {Arabidopsis thaliana} 3 2 20 11 At4g36980 expressed protein 3 2 20 12 At4g37160 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase 3 2 20 13 At4g37210 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q02508 Protein HGV2 Halocynthia roretzi; contains Pfam profile PF00515 TPR Domain 3 2 20 14 At4g39800 inositol-3-phosphate synthase isozyme 1 / myo-inositol-1-phosphate synthase 1 / MI-1-P synthase 1 / IPS 1 identical to SP|P42801 Inositol-3-phosphate synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1- phosphate synthase 1) (MI-1-P synthase 1) (IPS 1) {Arabidopsis thaliana} 3 2 20 15 At4g39860 expressed protein 3 2 20 16 At4g40010 "serine/threonine protein kinase, putative similar to serine-threonine protein kinase [Triticum aestivum] gi|2055374|gb|AAB58348" 3 2 20 17 At4g40050 expressed protein 3 2 20 18 At5g01090 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 3 2 20 19 At5g01150 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 3 2 20 20 At5g01280 expressed protein 3 2 20 21 At5g01340 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 2 20 22 At5g04045 Expressed protein 3 2 20 23 At5g04110 "DNA topoisomerase II family protein siimilar to DNA topoisomerase II subunit B [Thermotoga maritima] GI:1622792; contains Pfam profiles PF00204: DNA topoisomerase II (N-terminal region), PF00249: Myb-like DNA-binding domain" 3 2 20 24 At5g04270 zinc finger (DHHC type) family protein low similarity to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 3 2 20 25 At5g04340 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 3 2 21 1 At5g04510 "3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166" 3 2 21 2 At5g04590 "sulfite reductase / ferredoxin (SIR) identical to sulfite reductase [Arabidopsis thaliana] GI:804953, GI:2584721" 3 2 21 3 At5g04760 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 2 21 4 At5g04800 "40S ribosomal protein S17 (RPS17D) 40S ribosomal protein S17, Lycopersicon esculentum, EMBL:AF161704" 3 2 21 5 At5g07340 "calnexin, putative identical to calnexin homolog 2 from Arabidopsis thaliana [SP|Q38798], strong similarity to calnexin homolog 1, Arabidopsis thaliana, EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262 calreticulin family" 3 2 21 6 At5g07390 respiratory burst oxidase protein A (RbohA) / NADPH oxidase identical to respiratory burst oxidase protein A from Arabidopsis thaliana [gi:3242781] 3 2 21 7 At5g07560 "glycine-rich protein (GRP20) oleosin; glycine-rich protein 20 (GRP20); similar to - Brassica napus, PIR:S50195" 3 2 21 8 At5g07620 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 21 9 At5g07810 "SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein similar to HepA-related protein HARP [Homo sapiens] GI:6693791; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF01844: HNH endonuclease" 3 2 21 10 At5g07870 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 3 2 21 11 At5g08050 "expressed protein predicted protein, Arabidopsis thaliana" 3 2 21 12 At5g08100 L-asparaginase / L-asparagine amidohydrolase identical to Swiss-Prot:P50287 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) [Arabidopsis thaliana] 3 2 21 13 At5g11130 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 2 21 14 At5g11170 "DEAD/DEAH box helicase, putative (RH15) DEAD BOX RNA helicase RH15, Arabidopsis thaliana, EMBL:ATH010466" 3 2 21 15 At5g11340 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to SP|Q03503 L-A virus GAG protein N-acetyltransferase (EC 2.3.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 3 2 21 16 At5g11400 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 2 21 17 At5g11580 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein contains Pfam PF00415 : Regulator of chromosome condensation (RCC1); similar to rjs protein (GI:3414809) [Mus musculus]; similar to HERC2 (GI:4079809) [Homo sapiens];similar to UVB-resistance protein UVR8 (GI:10177674) {Arabidopsis thaliana} 3 2 21 18 At5g11620 "SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related contains weak similarity to Swiss-Prot:P53349 mitogen-activated protein kinase kinase kinase 1 (MAPK/ERK kinase kinase 1, MEK kinase 1, MEKK 1) [Mus musculus]; contains Pfam profile PF04434: SWIM zinc finger" 3 2 21 19 At5g11800 "K+ efflux antiporter, putative (KEA6) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; similar to glutathione-regulated potassium-efflux system protein KEFB, Escherichia coli, SWISSPROT:P45522" 3 2 21 20 At5g11860 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 3 2 21 21 At5g15000 hypothetical protein 3 2 21 22 At5g15060 hypothetical protein 3 2 21 23 At5g15220 "ribosomal protein L27 family protein ribosomal protein L27, Haemophilus influenzae, PIR:F64099" 3 2 21 24 At5g15270 "KH domain-containing protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 3 2 21 25 At5g15460 expressed protein 3 2 22 1 At5g15500 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 3 2 22 2 At5g15650 reversibly glycosylated polypeptide-2 (RGP2) identical to reversibly glycosylated polypeptide-2 [Arabidopsis thaliana] GI:2317731 3 2 22 3 At5g15710 "F-box family protein unusual floral organs protein UFO - Arabidopsis thaliana, PIR:S57710" 3 2 22 4 At5g18350 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 22 5 At5g18400 expressed protein contains Pfam profile PF05093: Protein of unknown function (DUF689) 3 2 22 6 At5g18540 periplasmic cytochrome C-related contains weak similarity to periplasmic cytochrome C (GI:15594131) [Thermus thermophilus] 3 2 22 7 At5g18600 "glutaredoxin family protein contains glutaredoxin domain, INTERPRO:IPR002109" 3 2 22 8 At5g18730 hypothetical protein predicted proteins - Arabidopsis thaliana 3 2 22 9 At5g18790 "ribosomal protein L33 family protein ribosomal protein L33, Rickettsia prowazekii, PIR:E71650" 3 2 22 10 At5g18940 Mo25 family protein similar to SP|Q06138 MO25 protein {Mus musculus}; contains Pfam profile PF03204: Mo25 protein family 3 2 22 11 At5g18980 expressed protein 3 2 22 12 At5g22310 expressed protein 3 2 22 13 At5g22360 synaptobrevin family protein similar to Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens] 3 2 22 14 At5g22540 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 3 2 22 15 At5g22570 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 3 2 22 16 At5g22730 F-box family protein contains F-box domain Pfam:PF00646 3 2 22 17 At5g22780 "adaptin family protein similar to SP|P18484 adaptor-related protein complex 2 alpha 2 subunit (Alpha-adaptin C) (Clathrin assembly protein complex 2 alpha-C large chain) {Rattus norvegicus}; contains Pfam profiles PF01602 Adaptin N terminal region, PF02883 Adaptin C-terminal domain" 3 2 22 18 At5g22940 exostosin family protein contains Pfam profile: PF03016 exostosin family 3 2 22 19 At5g23000 myb family transcription factor (MYB37) contains PFAM profile: myb DNA binding domain PF00249; 3 2 22 20 At5g25580 expressed protein 3 2 22 21 At5g25640 expressed protein ; expression supported by MPSS 3 2 22 22 At5g25880 "malate oxidoreductase, putative similar to NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (SP:P12628) {Phaseolus vulgaris}" 3 2 22 23 At5g25940 early nodulin-related contains weak similarity to Swiss-Prot:Q02921 early nodulin 93 (N-93) [Glycine max] 3 2 22 24 At5g26090 hypothetical protein 3 2 22 25 At5g26150 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 23 1 At5g26310 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 2 23 2 At5g26570 glycoside hydrolase starch-binding domain-containing protein similar to SEX1 (starch excess) [Arabidopsis thaliana] GI:12044358; contains Pfam profile PF00686: Starch binding domain 3 2 23 3 At5g32590 "myosin heavy chain-related similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)(SP:Q99323) {Drosophila melanogaster}" 3 2 23 4 At5g32621 expressed protein contains Pfam profile PF04827: Protein of unknown function (DUF635) 3 2 23 5 At5g33393 hypothetical protein 3 2 23 6 At5g33898 hypothetical protein 3 2 23 7 At5g34887 expressed protein 3 2 23 8 At5g34940 "glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase precursor [Scutellaria baicalensis] GI:8918740; contains Pfam profile PF03662: Glycosyl hydrolase family 79, N-terminal domain" 3 2 23 9 At5g35180 expressed protein 3 2 23 10 At5g35220 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease 3 2 23 11 At5g38380 expressed protein 3 2 23 12 At5g38420 "ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) identical to SP|P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) {Arabidopsis thaliana}" 3 2 23 13 At5g38590 F-box family protein contains F-box domain Pfam:PF00646 3 2 23 14 At5g38640 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|P41111 Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) {Oryctolagus cuniculus}; contains Pfam profile PF01008: Initiation factor 2 subunit family 3 2 23 15 At5g38820 amino acid transporter family protein low similarity to N system amino acids transporter NAT-1 [Mus musculus] GI:7406950; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 3 2 23 16 At5g38890 exoribonuclease-related similar to SP|P53859 3'-5' exoribonuclease CSL4 (EC 3.1.13.-) {Saccharomyces cerevisiae} 3 2 23 17 At5g39040 "ABC transporter (TAP2) TAP-like ABC transporter, Rattus norvegicus, EMBL:AB027520; identical to cDNA transporter associated with antigen processing-like protein (TAP2); GI:19335723" 3 2 23 18 At5g39120 "germin-like protein, putative similar to germin -like protein GLP6, Arabidopsis thaliana, EMBL:ATU75194 [SP|P92997]" 3 2 23 19 At5g41960 expressed protein 3 2 23 20 At5g42020 luminal binding protein 2 (BiP-2) (BP2) similar to SWISS-PROT: Q39043; GI:1303695; luminal binding protein (BiP) [Arabidopsis thaliana] 3 2 23 21 At5g42160 "GDSL-motif lipase/hydrolase protein-related similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}, family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]" 3 2 23 22 At5g42220 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 23 23 At5g42380 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]" 3 2 23 24 At5g42440 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 23 25 At5g42630 myb family transcription factor (KAN4) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA GARP-like putative transcription factor KANADI4 (KAN4) GI:15723592 3 2 24 1 At5g42670 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 2 24 2 At5g45240 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 24 3 At5g45280 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 3 2 24 4 At5g45410 expressed protein similar to unknown protein (pir||T05524) 3 2 24 5 At5g45470 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 3 2 24 6 At5g45620 "26S proteasome regulatory subunit, putative (RPN9) contains similarity to 26S proteasome subunit p40.5 GI:3618343 from [Homo sapiens]" 3 2 24 7 At5g45670 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 2 24 8 At5g45810 CBL-interacting protein kinase 19 (CIPK19) identical to CBL-interacting protein kinase 19 [Arabidopsis thaliana] gi|14009296|gb|AAK50347 3 2 24 9 At5g45870 "Bet v I allergen family protein similar to class 10 PR protein [Medicago sativa] GI:13928071, cytokinin-specific binding protein [Vigna radiata] GI:4190976; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 3 2 24 10 At5g48460 "fimbrin-like protein, putative strong similarity to fimbrin-like protein AtFim2 [Arabidopsis thaliana] GI:2737926; contains Pfam profile PF00307: Calponin homology (CH) domain" 3 2 24 11 At5g48510 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 3 2 24 12 At5g48655 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 2 24 13 At5g48680 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 3 2 24 14 At5g48860 hypothetical protein 3 2 24 15 At5g48920 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 2 24 16 At5g49070 "beta-ketoacyl-CoA synthase family protein similar to very-long-chain fatty acid condensing enzyme CUT1 [GI:5001734], beta-ketoacyl-CoA synthase [Simmondsia chinensis][GI:1045614]" 3 2 24 17 At5g49130 MATE efflux family protein contains Pfam profile PF01554: MatE Uncharacterized membrane protein family 3 2 24 18 At5g51850 expressed protein similar to unknown protein (emb|CAB81354.1) 3 2 24 19 At5g51890 peroxidase-related similar to peroxidase [Spinacia oleracea] gi|2956707|emb|CAA76376 3 2 24 20 At5g52060 BAG domain-containing protein contains Pfam:PF02179 BAG domain 3 2 24 21 At5g52110 expressed protein similar to unknown protein (pir||S76150) 3 2 24 22 At5g52280 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} 3 2 24 23 At5g52340 exocyst subunit EXO70 family protein strong similarity to unknown protein (emb|CAB83315.1); contains Pfam domain PF03081: Exo70 exocyst complex subunit; 3 2 24 24 At5g52520 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|P07814 Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] {Homo sapiens}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain" 3 2 24 25 At5g52560 UDP-N-acetylglucosamine pyrophosphorylase-related contains weak similarity to UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (Swiss-Prot:O74933) [Candida albicans] 3 2 25 1 At5g55220 "trigger factor type chaperone family protein contains Pfam profiles PF05697: Bacterial trigger factor protein (TF), PF05698: Bacterial trigger factor protein (TF) C-terminus, PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 2 25 2 At5g55280 "cell division protein FtsZ, chloroplast, putative (FTSZ) identical to SP|Q42545 Cell division protein ftsZ homolog, chloroplast precursor {Arabidopsis thaliana}; similar to FtsZ1 [Tagetes erecta] GI:8896066; contains Pfam profiles PF00091: Tubulin/FtsZ family, GTPase domain, PF03953: Tubulin/FtsZ family, C-terminal domain" 3 2 25 3 At5g55460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 3 2 25 4 At5g55510 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to SP|Q99595 Mitochondrial import inner membrane translocase subunit TIM17 A {Homo sapiens}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17 3 2 25 5 At5g55650 hypothetical protein 3 2 25 6 At5g55710 expressed protein 3 2 25 7 At5g55880 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 3 2 25 8 At5g55940 expressed protein contains Pfam PF03665: Uncharacterised protein family (UPF0172) 3 2 25 9 At5g58540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 2 25 10 At5g58590 "Ran-binding protein 1, putative / RanBP1, putative strong similarity to Ran binding proteins from Arabidopsis thaliana atranbp1a [Arabidopsis thaliana] GI:2058282, atranbp1b [Arabidopsis thaliana] GI:2058284; contains Pfam profile PF00638: RanBP1 domain" 3 2 25 11 At5g58750 wound-responsive protein-related similar to induced upon wounding stress [Arabidopsis thaliana] GI:1483218 3 2 25 12 At5g58787 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 3 2 25 13 At5g58970 uncoupling protein (UCP2) identical to uncoupling protein GI:4063007 from [Arabidopsis thaliana] 3 2 25 14 At5g59010 "protein kinase-related low similarity to serine/threonine/tyrosine-specific protein kinase APK1, Arabidopsis thaliana, SP|Q06548 PIR:S28615; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 3 2 25 15 At5g59160 serine/threonine protein phosphatase PP1 isozyme 2 (TOPP2) identical to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana} 3 2 25 16 At5g59200 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 2 25 17 At5g61810 "mitochondrial substrate carrier family protein similar to peroxisomal Ca-dependent solute carrier, Oryctolagus cuniculus,GI:2352427; contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 2 25 18 At5g61880 "signaling molecule-related contains similarity to mitochondria-associated granulocyte macrophage CSF signaling molecule, mitochondrial precursor (CGI-136) [Mus musculus] SWISS-PROT:Q9CQV1" 3 2 25 19 At5g62060 F-box family protein contains F-box domain Pfam:PF00646 3 2 25 20 At5g62110 hypothetical protein 3 2 25 21 At5g62270 expressed protein 3 2 25 22 At5g62330 expressed protein 3 2 25 23 At5g62490 ABA-responsive protein (HVA22b) identical to AtHVA22b [Arabidopsis thaliana] GI:4884934 3 2 25 24 At5g62550 expressed protein 3 2 25 25 At5g65090 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 2 26 1 At5g65160 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 3 2 26 2 At5g65290 LMBR1 integral membrane family protein contains Pfam PF04791: LMBR1-like conserved region 3 2 26 3 At5g65350 "histone H3 nearly identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 3 2 26 4 At5g65500 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 3 2 26 5 At5g65560 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 2 26 6 At5g65710 "leucine-rich repeat transmembrane protein kinase, putative " 3 2 26 7 At5g65770 nuclear matrix constituent protein-related low similarity to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 3 2 26 8 ath-MIR166e miRNA gene Arabidopsis thaliana miR166e stem-loop 3 2 26 9 ath-MIR156d miRNA gene Arabidopsis thaliana miR156d stem-loop 3 2 26 10 ath-MIR169m miRNA gene Arabidopsis thaliana miR169m stem-loop 3 2 26 11 ath-MIR395d miRNA gene Arabidopsis thaliana miR395d stem-loop 3 2 26 12 3xSSC 3xSSC 3 2 26 13 3xSSC 3xSSC 3 2 26 14 3xSSC 3xSSC 3 2 26 15 3xSSC 3xSSC 3 2 26 16 At3g44716 hypothetical protein 3 2 26 17 At3g44755 hypothetical protein 3 2 26 18 At3g44910 "cation/hydrogen exchanger, putative (CHX12) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 3 2 26 19 At3g44960 expressed protein ; expression supported by MPSS 3 2 26 20 At3g45110 hypothetical protein 3 2 26 21 At3g45170 "zinc finger (GATA type) family protein contains GATA-type zinc finger domain, INTERPRO:IPR000679" 3 2 26 22 At3g45380 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 2 26 23 At3g45440 "lectin protein kinase family protein contains Legume lectins beta-chain signature, PROSITE:PS00307 and PS00108: Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 3 2 26 24 Blank Blank 3 2 26 25 Blank Blank 3 3 1 1 atc04 Randomly generated negative control 3 3 1 2 atc10 Randomly generated negative control 3 3 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 3 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 3 3 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 3 3 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 3 3 1 7 atc08 Randomly generated negative control 3 3 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 3 3 1 9 At1g02040 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 3 3 1 10 At1g02070 expressed protein 3 3 1 11 At1g02190 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]" 3 3 1 12 At1g02230 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) protein 3 3 1 13 At1g02405 "proline-rich family protein contains proline-rich region, INTERPRO:IPR000694" 3 3 1 14 At1g02460 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 3 1 15 At1g02650 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 3 3 1 16 At1g02690 "importin alpha-2 subunit, putative similar to importin alpha-2 subunit (Karyopherin alpha-2 subunit) (KAP alpha) SP:O04294 from [Arabidopsis thaliana]" 3 3 1 17 At1g05300 "metal transporter, putative (ZIP5) identical to putative metal transporter ZIP5 [Arabidopsis thaliana] gi|17385784|gb|AAL38432; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 1 18 At1g05350 thiF family protein low similarity to SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia coli}; contains Pfam profile PF00899: ThiF family 3 3 1 19 At1g05510 expressed protein 3 3 1 20 At1g05570 "callose synthase 1 (CALS1) / 1,3-beta-glucan synthase 1 nearly identical to callose synthase 1 catalytic subunit [Arabidopsis thaliana] GI:13649388" 3 3 1 21 At1g05710 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413; identical to bHLH transcription factor (bHLH-alpha gene)" 3 3 1 22 At1g05760 "jacalin lectin family protein (RTM1) identical to gi:6503088 (GB:AAF14583) from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494 (2000)); contains Pfam profile PF01419 jacalin-like lectin domain" 3 3 1 23 At1g05890 zinc finger protein-related contains low similarity to zinc finger proteins and Pfam PF01485: IBR domain 3 3 1 24 At1g05930 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 3 3 1 25 At1g08450 calreticulin 3 (CRT3) identical to similar to SP|O04153 Calreticulin 3 precursor {Arabidopsis thaliana} 3 3 2 1 At1g08500 plastocyanin-like domain-containing protein 3 3 2 2 At1g08660 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 3 3 2 3 At1g08710 F-box family protein similar to ESTs gb|T22270 and gb|T76886 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 3 2 4 At1g08840 "DNA replication helicase, putative similar to helicase [Xenopus laevis] gi|18845092|gb|AAL79550" 3 3 2 5 At1g08910 zinc finger (MIZ type) family protein similar to putative variable cytadhesin protein (GI:7677312) {Mycoplasma gallisepticum}; contains Pfam PF02891: MIZ zinc finger domain 3 3 2 6 At1g09070 "C2 domain-containing protein / src2-like protein, putative similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain; identical to cDNA src2-like protein GI:3426059" 3 3 2 7 At1g09150 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein similar to MCT-1 (putative oncogene) [Homo sapiens] GI:6177738; contains Pfam profile PF01472: PUA domain 3 3 2 8 At1g11710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 2 9 At1g11765 S1 self-incompatibility protein-related contains weak similarity to S1 self-incompatibility protein [Papaver rhoeas] gi|452430|emb|CAA52380 3 3 2 10 At1g11905 expressed protein 3 3 2 11 At1g11930 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 3 3 2 12 At1g12080 expressed protein 3 3 2 13 At1g12140 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase [Cavia porcellus] GI:191259; contains Pfam profile PF00743: Flavin-binding monooxygenase-like 3 3 2 14 At1g12320 expressed protein 3 3 2 15 At1g12370 type II CPD photolyase PHR1 (PHR1) nearly identical to type II CPD photolyase PHR1 [Arabidopsis thaliana] GI:2984707; similar to class II DNA photolyase (GI:5081541) [Chlamydomonas reinhardtii]; supporting cDNA gi|2984706|gb|AF053365.1|AF053365 3 3 2 16 At1g15130 hydroxyproline-rich glycoprotein family protein 3 3 2 17 At1g15165 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 3 3 2 18 At1g15290 tetratricopeptide repeat (TPR)-containing protein ESTs gb|F20110 and gb|F20109 come from this gene; contains Pfam profile PF00515: TPR Domain 3 3 2 19 At1g15350 expressed protein 3 3 2 20 At1g15470 "transducin family protein / WD-40 repeat family protein Strong similarity to gb AF096285 serine-threonine kinase receptor-associated protein from Mus musculus and contains 5 PF|00400 WD40, G-beta repeat domains. EST gb|F14050 comes from this gene" 3 3 2 21 At1g15530 "receptor lectin kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 3 3 2 22 At1g15730 "PRLI-interacting factor L, putative strong similarity to PRLI-interacting factor L GI:11139268 from [Arabidopsis thaliana]; contains Pfam profile PF02492: Cobalamin synthesis protein/P47K" 3 3 2 23 At1g15790 expressed protein 3 3 2 24 At1g18550 kinesin motor protein-related contains similarity to kinesin-related protein GI:4493964 from [Plasmodium falciparum] 3 3 2 25 At1g18610 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 3 3 3 1 At1g18780 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 3 2 At1g18850 expressed protein 3 3 3 3 At1g19010 expressed protein 3 3 3 4 At1g19050 two-component responsive regulator / response regulator 7 (ARR7) identical to response regulator 7 GI:3953603 from [Arabidopsis thaliana] 3 3 3 5 At1g19200 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 3 3 3 6 At1g19260 hAT dimerisation domain-containing protein 3 3 3 7 At1g22160 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 3 8 At1g22220 F-box family protein contains F-box domain Pfam:PF00646 3 3 3 9 At1g22330 RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 3 3 10 At1g22380 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 3 11 At1g22590 MADS-box family protein similar to putative DNA-binding protein GI:6714399 from [Arabidopsis thaliana]; MADS-box protein AGL87 3 3 3 12 At1g22630 expressed protein contains Pfam PF00684 : DnaJ central domain (4 repeats) 3 3 3 13 At1g22780 "40S ribosomal protein S18 (RPS18A) Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A. thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and gb|R30430 come from this gene" 3 3 3 14 At1g22850 expressed protein 3 3 3 15 At1g26390 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 3 3 16 At1g26450 "beta-1,3-glucanase-related similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 3 3 3 17 At1g26640 aspartate/glutamate/uridylate kinase family protein contains Pfam amino acid kinase family PF00696 3 3 3 18 At1g26670 vesical transport v-SNARE 12 (VTI12) / vesicle soluble NSF attachment protein receptor VTI1b (VTI1B) receptor VTI1b identical to SP|Q9SEL5 Vesicle transport v-SNARE 12 (AtVTI12) (Vesicle transport v-SNARE protein VTI1b) (Vesicle soluble NSF attachment protein receptor VTI1b) (AtVTI1b) {Arabidopsis thaliana} 3 3 3 19 At1g26810 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 3 3 3 20 At1g26870 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to GB:AAD22369, NAM stands for No Apicla Meristem" 3 3 3 21 At1g27070 "5'-AMP-activated protein kinase-related contains weak similarity to Swiss-Prot:Q9QZH4 5'-AMP-activated protein kinase, beta-2 subunit (AMPK beta-2 chain) [Rattus norvegicus]" 3 3 3 22 At1g27130 "glutathione S-transferase, putative similar to glutathione S-transferase GB: AAF22517 GI:6652870 from [Papaver somniferum]" 3 3 3 23 At1g29980 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 3 3 3 24 At1g30040 gibberellin 2-oxidase / GA2-oxidase (GA2OX2) identical to GI:4678368 ga2ox2 3 3 3 25 At1g30210 "TCP family transcription factor, putative similar to TFPD (GI:6681577) [Arabidopsis thaliana]; contains similarity to cyc1A protein GI:6358548 from [Antirrhinum graniticum]" 3 3 4 1 At1g30270 CBL-interacting protein kinase 23 (CIPK23) identical to CBL-interacting protein kinase 23 [Arabidopsis thaliana] gi|14486386|gb|AAK61494 3 3 4 2 At1g30480 "DNA-damage-repair/toleration protein, chloroplast (DRT111) nearly identical to SP|P42698 DNA-damage-repair/toleration protein DRT111, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profiles PF01585: G-patch domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 3 3 4 3 At1g30510 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751" 3 3 4 4 At1g30680 toprim domain-containing protein contains Pfam profile: PF01751 toprim domain 3 3 4 5 At1g30740 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 3 4 6 At1g33770 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 3 4 7 At1g33820 hypothetical protein 3 3 4 8 At1g34000 light stress-responsive one-helix protein (OHP2) contains similarity to photosystem II 22 kDa protein GI:6006279 from [Arabidopsis thaliana] 3 3 4 9 At1g34040 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 3 3 4 10 At1g34220 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 3 4 11 At1g34300 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 3 3 4 12 At1g34470 permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007 3 3 4 13 At1g34540 cytochrome P450 family protein similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450 3 3 4 14 At1g44770 expressed protein 3 3 4 15 At1g44830 "AP2 domain-containing transcription factor TINY, putative contains AP2 domain; similar to TINY (GP:1246403) [Arabidopsis thaliana]" 3 3 4 16 At1g45015 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 3 3 4 17 At1g45130 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase [Lycopersicon esculentum] GI:7939619, beta-galactosidase BG1 GI:15081596 from [Vitis vinifera]; contains Pfam profile PF01301: Glycosyl hydrolases family 35" 3 3 4 18 At1g45403 membrane protein 3 3 4 19 At1g45688 expressed protein 3 3 4 20 At1g47230 "cyclin, putative similar to cyclin A-like protein [Nicotiana tabacum] GI:1064931, A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 3 4 21 At1g47290 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 3 3 4 22 At1g50230 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 3 4 23 At1g50290 expressed protein 3 3 4 24 At1g50480 formate--tetrahydrofolate ligase / 10-formyltetrahydrofolate synthetase (THFS) identical to 10-formyltetrahydrofolate synthetase (Arabidopsis thaliana) GI:5921663 3 3 4 25 At1g50560 "cytochrome P450, putative similar to CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]" 3 3 5 1 At1g50730 expressed protein 3 3 5 2 At1g50790 hypothetical protein 3 3 5 3 At1g51000 expressed protein ; expression supported by MPSS 3 3 5 4 At1g51070 basic helix-loop-helix (bHLH) family protein similar to bHLH transcription factor GI:3757520 from [Arabidopsis thaliana] 3 3 5 5 At1g53705 hypothetical protein 3 3 5 6 At1g53770 expressed protein 3 3 5 7 At1g53930 ubiquitin family protein contains Pfam profile: PF00240 ubiquitin family 3 3 5 8 At1g53990 "GDSL-motif lipase/hydrolase family protein similar to myrosinase-associated proteins from [Brassica napus] GI:1769968 GI:1769970, SP|P40603 Anther-specific proline-rich protein APG {Brassica napus}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 3 5 9 At1g54110 "cation exchanger, putative (CAX10) Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 3 3 5 10 At1g54160 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 3 3 5 11 At1g54310 expressed protein 3 3 5 12 At1g54360 expressed protein 3 3 5 13 At1g58025 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487; contains prenyl group binding site (CAAX box) Prosite:PS00294" 3 3 5 14 At1g58090 F-box family protein contains F-box domain Pfam:PF00646 3 3 5 15 At1g58260 cytochrome P450 family protein similar to cytochrome P450 GI:984542 from [Sorghum bicolor] 3 3 5 16 At1g58290 "glutamyl-tRNA reductase 1 / GluTR (HEMA1) identical to glutamyl-tRNA reductase 1, chloroplast [SP|P42804]" 3 3 5 17 At1g58470 RNA-binding protein (XF41) identical to RNA binding protein GI:18181938 from (Arabidopsis thaliana); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain 15450911 gb AY054536.1 3 3 5 18 At1g58725 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 3 5 19 At1g59550 UBX domain-containing protein contains Pfam profile PF00789: UBX domain 3 3 5 20 At1g59600 expressed protein similar to B-lymphocyte antigen precursor (B-lymphocyte surface antigen) (721P) (Protein XE7) (Swiss-Prot:Q02040) [Homo sapiens]; supporting cDNA gi|6520226|dbj|AB028230.1| 3 3 5 21 At1g62530 hypothetical protein 3 3 5 22 At1g62600 flavin-containing monooxygenase family protein / FMO family protein low similarity to flavin-containing monooxygenase 2 from Cavia porcellus [SP|P36366]; contains Pfam profile PF00743 Flavin-binding monooxygenase-like 3 3 5 23 At1g62770 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143, Phaseolus vulgaris SP|Q43111; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 3 3 5 24 At1g62800 "aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana]" 3 3 5 25 At1g62950 "leucine-rich repeat transmembrane protein kinase, putative contains protein kinase domains" 3 3 6 1 At1g63000 expressed protein 3 3 6 2 At1g63150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 6 3 At1g63205 hypothetical protein 3 3 6 4 At1g65950 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 3 3 6 5 At1g66000 "expressed protein contains Pfam PF04510 : Family of unknown function (DUF577); common family comprised of At4g09440, At1g66000, At1g66060" 3 3 6 6 At1g66160 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 3 3 6 7 At1g66210 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 3 3 6 8 At1g66370 myb family transcription factor (MYB113) contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 6 9 At1g66430 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 3 3 6 10 At1g66590 cox19 family protein contains Pfam profile PF05490: Cox19 protein 3 3 6 11 At1g66650 "seven in absentia (SINA) protein, putative similar to SIAH2 protein [Brassica napus var. napus] GI:7657878; contains Pfam profile PF03145: Seven in absentia protein family" 3 3 6 12 At1g69320 "CLE10, putative CLAVATA3/ESR-Related 10 (CLE10)" 3 3 6 13 At1g69370 "chorismate mutase, putative similar to gi:5732016 and SP|P42738; contains Pfam profile: PF01817: Chorismate mutase" 3 3 6 14 At1g69510 expressed protein 3 3 6 15 At1g69530 "expansin, putative (EXP1) identical to expansin (At-EXP1) [Arabidopsis thaliana] GI:1041702; alpha-expansin gene family, PMID:11641069" 3 3 6 16 At1g69710 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 3 3 6 17 At1g69770 "chromomethylase 3 (CMT3) nearly identical to chromomethylase CMT3 [Arabidopsis thaliana] GI:14583092, GI:14647157" 3 3 6 18 At1g69940 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 3 6 19 At1g70020 hypothetical protein 3 3 6 20 At1g72820 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 3 6 21 At1g72860 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 6 22 At1g73040 "jacalin lectin family protein similar to jacalin Artocarpus heterophyllus GI:289160, SP|P18674 Agglutinin alpha chain (MPA) Maclura pomifera, SP|P18670 Agglutinin alpha chain (Jacalin alpha chain) Artocarpus integrifolia; contains Pfam profile PF01419 jacalin-like lectin domain" 3 3 6 23 At1g73110 "ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) [Oryza sativa] SWISS-PROT:P93431" 3 3 6 24 At1g73250 "GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1) identical to GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1)GI:6016479 from [Arabidopsis thaliana]" 3 3 6 25 At1g73310 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare]; glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase 3 3 7 1 At1g73470 expressed protein 3 3 7 2 At1g73540 "MutT/nudix family protein low similarity to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 3 3 7 3 AT5G57480 PC-1 C10 3 3 7 4 3XSSC PC-1 C22 3 3 7 5 AT1G29930 PC-1 G10 3 3 7 6 3XSSC PC-1 G22 3 3 7 7 AT3G44150 PC-1 K10 3 3 7 8 3XSSC PC-1 K22 3 3 7 9 AT4G00810 PC-1 O10 3 3 7 10 3XSSC PC-1 O22 3 3 7 11 At1g76380 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 3 3 7 12 At1g76405 expressed protein 3 3 7 13 At1g76540 "cell division control protein, putative similar to SWISS-PROT:Q38775, cell division control protein 2 homolog D [Antirrhinum majus]; contains protein kinase domain, Pfam:PF00069" 3 3 7 14 At1g76600 expressed protein 3 3 7 15 At1g76770 heat shock protein-related contains similarity to 17.9 kDa heat-shock protein [Helianthus annuus] gi|11990130|emb|CAB55634 3 3 7 16 At1g76825 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain 3 3 7 17 At1g76955 Expressed protein 3 3 7 18 At1g76990 ACT domain containing protein low similarity to uridylyltransferase SP|P56884 from Rhizobium meliloti; contains Pfam ACT domain PF01842 3 3 7 19 At1g79650 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 3 3 7 20 At1g79680 "wall-associated kinase, putative similar to wall-associated kinase 2 GI:4826399 from [Arabidopsis thaliana]" 3 3 7 21 At1g79820 "hexose transporter, putative similar to hexose transporter GI:8347246 from (Solanum tuberosum); contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 7 22 At1g79880 La domain-containing protein contains Pfam profile PF05383: La domain; similar to putative protein GB:CAA18589 [Arabidopsis thaliana] 3 3 7 23 At1g79990 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]; similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus musculus]" 3 3 7 24 At1g80040 expressed protein 3 3 7 25 At1g80220 hypothetical protein 3 3 8 1 At1g80270 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat" 3 3 8 2 At2g03130 ribosomal protein L12 family protein 3 3 8 3 At2g03190 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At16), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 from [Arabidopsis thaliana]" 3 3 8 4 At2g03370 hypothetical protein contains Pfam profile PF04577: Protein of unknown function (DUF563) 3 3 8 5 At2g03440 nodulin-related similar to Early nodulin 12B precursor (N-12B) (Swiss-Prot:Q40339) [Medicago sativa] 3 3 8 6 At2g03610 F-box family protein contains F-box domain Pfam:PF00646 3 3 8 7 At2g03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein contains Pfam profile PF05019: Coenzyme Q (ubiquinone) biosynthesis protein Coq4 3 3 8 8 At2g03870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] SWISS-PROT:Q9UK45" 3 3 8 9 At2g03890 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 3 3 8 10 At2g07725 60S ribosomal protein L5 (RPL5) identical to SP|P42793 Mitochondrial 60S ribosomal protein L5 {Arabidopsis thaliana} 3 3 8 11 At2g07738 hypothetical protein 3 3 8 12 At2g09970 hypothetical protein 3 3 8 13 At2g10070 expressed protein very low similarity to AHM1 [Triticum aestivum] GI:6691467 3 3 8 14 At2g10550 hypothetical protein 3 3 8 15 At2g10850 hypothetical protein weak similarity to envelope-like [Glycine max] GI:3142379 3 3 8 16 At2g11270 "citrate synthase-related contains similarity to Swiss-Prot:P20115 citrate synthase, mitochondrial precursor [Arabidopsis thaliana]" 3 3 8 17 At2g11490 hypothetical protein 3 3 8 18 At2g16370 bifunctional dihydrofolate reductase-thymidylate synthase 1 / DHFR-TS (THY-1) identical to GP:289193:L08593 [SP|Q05762] 3 3 8 19 At2g16410 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 3 3 8 20 At2g16580 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR21 (GI:10185818) [Tulipa gesneriana]" 3 3 8 21 At2g16640 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 3 3 8 22 At2g16850 "plasma membrane intrinsic protein, putative very strong similarity to plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana] GI:2306917" 3 3 8 23 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 8 24 At2g17033 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 8 25 At2g17070 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function; expression supported by MPSS 3 3 9 1 At2g19920 "RNA-dependent RNA polymerase family protein contains Pfam domain, PF05183: RNA dependent RNA polymerase" 3 3 9 2 At2g19960 hAT dimerisation domain-containing protein / transposase-related very low similarity to transposase [Ipomoea purpurea] AB004906 GI:4063770; contains Pfam profile PF05699: hAT family dimerisation domain 3 3 9 3 At2g20130 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502)" 3 3 9 4 At2g20170 hypothetical protein and grail contains Pfam profile PF03080: Arabidopsis proteins of unknown function 3 3 9 5 At2g20370 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 3 9 6 At2g20430 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 3 3 9 7 At2g20585 expressed protein 3 3 9 8 At2g20610 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 3 3 9 9 At2g23250 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains similarity to glucosyltransferases 3 3 9 10 At2g23310 RER1C protein identical to SP|Q9ZWI7 RER1C protein (AtRER1C) {Arabidopsis thaliana} 3 3 9 11 At2g23510 "transferase family protein low similarity to EIG-I24 from Nicotiana tabacum [gi:10798748], 10-deacetylbaccatin III-10-O-acetyl transferase from Taxus cuspidata [gi:6746554]; contains Pfam transferase family domain PF02458" 3 3 9 12 At2g23550 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 9 13 At2g23750 SET domain-containing protein similar to SP|O60016 Cryptic loci regulator 4 (Histone-lysine N-methyltransferase) {Schizosaccharomyces pombe}; contains Pfam profile PF00856: SET domain 3 3 9 14 At2g23800 "geranylgeranyl pyrophosphate synthase (GGPS2) (GGPS5) / GGPP synthetase / farnesyltranstransferase identical to GB:U44876; sequence disagrees at N-Terminus, sequence submitted has been confirmed from three electropherograms." 3 3 9 15 At2g23985 expressed protein 3 3 9 16 At2g24020 "expressed protein contains Pfam domain PF02575: Uncharacterized BCR, YbaB family COG0718" 3 3 9 17 At2g26860 F-box family protein contains F-box domain Pfam:PF00646 3 3 9 18 At2g26920 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 3 3 9 19 At2g27050 ethylene-insensitive3-like1 (EIL1) identical to ethylene-insensitive3-like1 GI:2224927 from [Arabidopsis thaliana] 3 3 9 20 At2g27090 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 3 3 9 21 At2g27250 CLAVATA3 CLAVATA3/ESR-Related (CLE) family of proteins; ligand for CLV1; responsible for negative regulation of meristem cell differention and replacement 3 3 9 22 At2g27300 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 3 3 9 23 At2g27440 "rac GTPase activating protein, putative similar to rac GTPase activating protein 3 [Lotus japonicus] GI:3695063; contains Pfam profiles PF00620: RhoGAP domain, PF00786: P21-Rho-binding domain" 3 3 9 24 At2g27480 calcium-binding EF hand family protein similar to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 3 9 25 At2g30240 "cation/hydrogen exchanger, putative (CHX13) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 3 3 10 1 At2g30300 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 3 3 10 2 At2g30460 expressed protein contains 4 predicted transmembrane domains; similar to c_pp004044298r (GI:14597790) [Physcomitrella patens] 3 3 10 3 At2g30500 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 3 3 10 4 At2g30630 expressed protein similar to H1-1flk [Arabidopsis thaliana] GI:388260 3 3 10 5 At2g30695 expressed protein 3 3 10 6 At2g30860 "glutathione S-transferase, putative identical to GB:Y12295" 3 3 10 7 At2g30920 hexaprenyldihydroxybenzoate methyltransferase identical to hexaprenyldihydroxybenzoate methyltransferase SP:O49354 from [Arabidopsis thaliana] 3 3 10 8 At2g33500 zinc finger (B-box type) family protein 3 3 10 9 At2g33540 CTD phosphatase-like protein 3 (CPL3) identical to CTD phosphatase-like 3 (CPL3) [Arabidopsis thaliana] GI:22212705; contains Pfam profile PF03031: NLI interacting factor 3 3 10 10 At2g33710 AP2 domain-containing transcription factor family protein similar to RAP2.6 (GI:17065542) {Arabidopsis thaliana} 3 3 10 11 At2g33740 copper-binding protein (CUTA) identical to copper-binding protein CUTA GI:12963361 from [Arabidopsis thaliana]; contains Pfam profile: PF03091 CutA1 divalent ion tolerance protein 3 3 10 12 At2g33840 tRNA synthetase class I (W and Y) family protein similar to SP|P54577 Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosyl--tRNA ligase) (TyrRS) {Homo sapiens}; contains Pfam profile PF00579: tRNA synthetases class I (W and Y) 3 3 10 13 At2g33880 expressed protein 3 3 10 14 At2g34110 hypothetical protein 3 3 10 15 At2g34180 CBL-interacting protein kinase 13 (CIPK13) identical to CBL-interacting protein kinase 13 [Arabidopsis thaliana] gi|13249125|gb|AAK16688 3 3 10 16 At2g36770 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 10 17 At2g36830 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 3 10 18 At2g36970 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 10 19 At2g37020 translin family protein similar to SP|Q62348 Translin {Mus musculus}; contains Pfam profile PF01997: Translin family 3 3 10 20 At2g37150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 10 21 At2g37195 expressed protein 3 3 10 22 At2g37360 ABC transporter family protein 3 3 10 23 At2g37410 mitochondrial import inner membrane translocase (TIM17) nearly identical to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana} 3 3 10 24 At2g40020 expressed protein 3 3 10 25 At2g40060 expressed protein 3 3 11 1 At2g40160 expressed protein 3 3 11 2 At2g40210 MADS-box family protein contains Pfam profile: PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 3 3 11 3 At2g40380 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 3 3 11 4 At2g40410 "Ca(2+)-dependent nuclease, putative similar to Ca(2+)-dependent nuclease [Arabidopsis thaliana] GI:7684292" 3 3 11 5 At2g40570 initiator tRNA phosphoribosyl transferase family protein contains Pfam profile: PF04179 initiator tRNA phosphoribosyl transferase 3 3 11 6 At2g40630 expressed protein 3 3 11 7 At2g43180 expressed protein 3 3 11 8 At2g43210 UBX domain-containing protein contains Pfam profile PF00789: UBX domain 3 3 11 9 At2g43400 electron transfer flavoprotein-ubiquinone oxidoreductase family protein contains Pfam profile: PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase 3 3 11 10 At2g43450 expressed protein ; expression supported by MPSS 3 3 11 11 At2g43620 "chitinase, putative similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus]" 3 3 11 12 At2g43660 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 3 3 11 13 At2g43820 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 11 14 At2g43880 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 4 [Lycopersicon esculentum] GI:2459815; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 3 11 15 At2g46505 expressed protein 3 3 11 16 At2g46550 expressed protein 3 3 11 17 At2g46720 "fatty acid elongase 3-ketoacyl-CoA synthase, putative similar to GI:4091810; contains Pfam profile PF02797: Chalcone and stilbene synthases, C-terminal domain" 3 3 11 18 At2g46780 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 3 11 19 At2g46910 plastid-lipid associated protein PAP / fibrillin family protein contains Pfam profile PF04755: PAP_fibrillin 3 3 11 20 At2g46960 cytochrome P450 family protein similar to cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; contains Pfam profile: PF00067: Cytochrome P450; supported by cDNA: gi_13605860_gb_AF367329.1_AF367329 3 3 11 21 At2g47120 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 3 3 11 22 At2g47180 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]" 3 3 11 23 At3g02490 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 11 24 At3g02540 "ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain;" 3 3 11 25 At3g02680 hypothetical protein 3 3 12 1 At3g02740 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 3 3 12 2 At3g02890 PHD finger protein-related contains low similarity to PHD-finger domain proteins 3 3 12 3 At3g02950 expressed protein 3 3 12 4 At3g03130 expressed protein ; expression supported by MPSS 3 3 12 5 At3g03190 "glutathione S-transferase, putative identical to glutathione S-transferase GB:AAB09584 from [Arabidopsis thaliana]" 3 3 12 6 At3g05740 DNA helicase (RECQI1) identical to DNA Helicase [Arabidopsis thaliana] GI:10944747 3 3 12 7 At3g05800 expressed protein 3 3 12 8 At3g05960 "sugar transporter, putative similar to hexose transporter GI:5734440 GB:CAB52689 [Lycopersicon esculentum], Sugar carrier protein C [Ricinus communis] SP|Q41144, monosaccharide transporter [Nicotiana tabacum] GI:19885; contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 12 9 At3g06010 "homeotic gene regulator, putative similar to SP|P25439 Homeotic gene regulator (Brahma protein) {Drosophila melanogaster}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 3 3 12 10 At3g06130 heavy-metal-associated domain-containing protein contains Pfam heavy metal associated domain PF00403 3 3 12 11 At3g06180 expressed protein 3 3 12 12 At3g06350 "dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative similar to dehydroquinate dehydratase/shikimate dehydrogenase [Nicotiana tabacum][GI:535771], dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Lycopersicon esculentum][GI:3169883]" 3 3 12 13 At3g06410 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 3 12 14 At3g09340 "amino acid transporter family protein low similarity to vesicular GABA transporter [Rattus norvegicus] GI:2587061; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 3 3 12 15 At3g09400 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 3 3 12 16 At3g09570 expressed protein 3 3 12 17 At3g09640 L-ascorbate peroxidase 1b (APX1b) identical to ascorbate peroxidase [Arabidopsis thaliana] gi|555576|emb|CAA56340; 3 3 12 18 At3g09790 "polyubiquitin (UBQ8) identical to polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis thaliana] (Genetics 139 (2), 921-939 (1995))" 3 3 12 19 At3g09830 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 3 3 12 20 At3g09990 "equilibrative nucleoside transporter, putative (ENT2) identical to putative equilibrative nucleoside transporter ENT2 [Arabidopsis thaliana] GI:16518991; contains similarity to SWISS-PROT:Q14542 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type, 36 kDa nucleolar protein HNP36, Hydrophobic nucleolar protein, 36 kDa, Delayed-early response protein 12) [Homo sapiens]; contains Pfam profile PF01733: Nucleoside transporter" 3 3 12 21 At3g10050 "threonine ammonia-lyase / threonine dehydratase / threonine deaminase (OMR1) identical to SP|Q9ZSS6 Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19, formerly EC 4.2.1.16) (Threonine deaminase) (TD) {Arabidopsis thaliana}" 3 3 12 22 At3g12430 expressed protein ; expression supported by MPSS 3 3 12 23 At3g12490 "cysteine protease inhibitor, putative / cystatin, putative similar to PRLI-interacting factor M [Arabidopsis thaliana] GI:11139270, cysteine proteinase inhibitor [Brassica rapa] GI:762785; contains Pfam profile PF00031: Cystatin domain" 3 3 12 24 At3g12660 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan-protein 1 [Arabidopsis thaliana] gi|13377776|gb|AAK20857; 3 3 12 25 At3g12700 "aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 3 3 13 1 At3g12880 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 3 3 13 2 At3g12940 expressed protein 3 3 13 3 At3g13062 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 3 3 13 4 At3g13090 "ABC transporter, putative similar to MRP-like ABC transporter [Arabidopsis thaliana] GI:2316016; contains Pfam profile: PF00005 ABC transporter" 3 3 13 5 At3g15430 regulator of chromosome condensation (RCC1) family protein low similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 3 3 13 6 At3g15490 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 3 13 7 At3g15650 phospholipase/carboxylesterase family protein low similarity to lysophospholipase I [Mus musculus] GI:1864159; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 3 3 13 8 At3g15690 "biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana]" 3 3 13 9 At3g15870 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 3 3 13 10 At3g15910 hypothetical protein 3 3 13 11 At3g16070 hypothetical protein 3 3 13 12 At3g16130 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 3 3 13 13 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 3 3 13 14 At3g18820 "Ras-related GTP-binding protein, putative similar to Ras-related protein RAB7 GI:1370186 from [Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199 (1993); contains Pfam profile: PF00071 Ras family" 3 3 13 15 At3g18970 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 13 16 At3g19020 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 13 17 At3g19180 cell division protein-related weak similarity to cell division protein Ftn2 [Synechococcus sp. PCC 7942] GI:16226084 3 3 13 18 At3g19240 expressed protein 3 3 13 19 At3g19400 "cysteine proteinase, putative non-consensus AT acceptor site at exon 3; contains similarity to cysteine protease CYP1 GI:2828252, TDI-65 GI:5726641 from [Lycopersicon esculentum]" 3 3 13 20 At3g19460 reticulon family protein (RTNLB11) weak similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311; identical to cDNA RTNLB11 GI:32331878 3 3 13 21 At3g22180 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 3 3 13 22 At3g22231 expressed protein 3 3 13 23 At3g22410 expressed protein 3 3 13 24 At3g22425 imidazoleglycerol-phosphate dehydratase 1 (IGPD1) identical to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; supporting cDNA gi|437212|gb|U02689.1|ATU02689 3 3 13 25 At3g22550 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 14 1 At3g22620 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 3 3 14 2 At3g22800 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycsimilar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 14 3 At3g22850 "expressed protein similar to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 3 3 14 4 At3g25750 F-box family protein contains F-box domain Pfam:PF00646 3 3 14 5 At3g25805 expressed protein 3 3 14 6 At3g25930 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 3 3 14 7 At3g25990 DNA-binding protein GT-1-related similar to GT-1 GI:598073 from [Arabidopsis thaliana] 3 3 14 8 At3g26125 "cytochrome P450, putative " 3 3 14 9 At3g26180 "cytochrome P450 71B20, putative (CYP71B2) identical to cytochrome P450 71B20 (SP:Q9LTM3) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 3 3 14 10 At3g26340 "20S proteasome beta subunit E, putative very strong similarity to SP|O23717 Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) {Arabidopsis thaliana}" 3 3 14 11 At3g26400 "eukaryotic translation initiation factor 4B, putative/ eIF-4B, putative similar to eukaryotic initiation factor 4B [Arabidopsis thaliana] GI:6739518" 3 3 14 12 At3g29090 pectinesterase family protein similar to pectinesterase precursor GB:Q43043 [Petunia integrifolia]; contains Pfam profile: PF01095 pectinesterase 3 3 14 13 At3g29160 Snf1-related protein kinase (KIN11) identical to protein kinase AKin11 GI:1729444 from [Arabidopsis thaliana] 3 3 14 14 At3g29270 expressed protein 3 3 14 15 At3g29310 calmodulin-binding protein-related 3 3 14 16 At3g29470 hypothetical protein 3 3 14 17 At3g29600 hypothetical protein 3 3 14 18 At3g29765 hAT dimerisation domain-containing protein 3 3 14 19 At3g29791 expressed protein 3 3 14 20 At3g43890 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 3 14 21 At3g43950 hypothetical protein 3 3 14 22 At3g44120 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 3 14 23 At3g44180 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis thaliana]" 3 3 14 24 At3g44360 "expressed protein predicted protein, Arabidopsis thaliana" 3 3 14 25 At3g44450 expressed protein 3 3 15 1 At3g44610 "protein kinase family protein similar to viroid symptom modulation protein (protein kinase)[Lycopersicon esculentum] gi|7672777|gb|AAF66637; contains protein kinase domain, Pfam:PF00069" 3 3 15 2 At3g44680 "histone deacetylase, putative similar to histone deacetylase-1 (HD-1) [Gallus gallus] GI:2791684; contains Pfam profile PF00850: Histone deacetylase family; identical to cDNA histone deacetylase partial cds GI:21637258" 3 3 15 3 At3g47520 "malate dehydrogenase [NAD], chloroplast (MDH) identical to chloroplast NAD-malate dehydrogenase [Arabidopsis thaliana] GI:3256066; contains InterPro entry IPR001236: Lactate/malate dehydrogenase; contains Pfam profiles PF00056: lactate/malate dehydrogenase, NAD binding domain and PF02866: lactate/malate dehydrogenase, alpha/beta C-terminal domain" 3 3 15 4 At3g47560 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 3 3 15 5 At3g47730 "ABC transporter family protein AbcA, Dictyostelium discoideum, DDU66526" 3 3 15 6 At3g47790 "ABC transporter family protein contains Pfam domain, PF00005: ABC transporter" 3 3 15 7 At3g47950 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H(+)-transporting ATPase from Nicotiana plumbaginifolia [SP|Q08435, SP|Q08436], Lycopersicon esculentum [GI:5901757, SP|P22180], Solanum tuberosum [GI:435003]; contains InterPro accession IPR001757: ATPase, E1-E2 type" 3 3 15 8 At3g48010 "cyclic nucleotide-regulated ion channel, putative (CNGC16) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana]" 3 3 15 9 At3g48160 "transcription factor, putative / E2F-like repressor E2L3 (E2L3) identical to E2F-like repressor E2L3 [Arabidopsis thaliana] GI:20502508" 3 3 15 10 At3g48200 expressed protein 3 3 15 11 At3g51100 expressed protein 3 3 15 12 At3g51150 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 3 3 15 13 At3g51330 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 3 3 15 14 At3g51380 calmodulin-binding family protein 3 3 15 15 At3g51560 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 15 16 At3g51620 expressed protein 3 3 15 17 At3g51760 "hypothetical protein hypothetical protein F17M19.12 - Arabidopsis thaliana, EMBL:AC021665" 3 3 15 18 At3g51800 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 3 3 15 19 At3g54310 "hypothetical protein predicted protein, Arabidopsis thaliana" 3 3 15 20 At3g54360 "expressed protein DNA-binding Mel-18 protein, Homo sapiens, PIR:JN0717" 3 3 15 21 At3g54510 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 3 3 15 22 At3g54570 calmodulin-binding protein-related contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from [Solanum tuberosum] 3 3 15 23 At3g54750 expressed protein 3 3 15 24 At3g54810 "zinc finger (GATA type) family protein GATA transcription factor 3, Arabidopsis thaliana, Y13650" 3 3 15 25 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 3 3 16 1 At3g54970 expressed protein 3 3 16 2 At3g57800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supported by full-length cDNA gi:20127059 3 3 16 3 At3g57840 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 3 3 16 4 At3g58020 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 3 3 16 5 At3g58080 hypothetical protein 3 3 16 6 At3g58270 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 3 16 7 At3g58330 hypothetical protein 3 3 16 8 At3g58490 "phosphatidic acid phosphatase family protein / PAP2 family protein similar to sphingosine-1-phosphate phosphohydrolase from [Mus musculus] GI:9623190, [Homo sapiens] GI:23345324; contains Pfam profile PF01569: PAP2 superfamily" 3 3 16 9 At3g58550 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain 3 3 16 10 At3g61270 expressed protein 3 3 16 11 At3g61340 F-box family protein contains F-box domain Pfam:PF00646 3 3 16 12 At3g61490 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 3 3 16 13 At3g61540 "peptidase family protein similar to prolyl aminopeptidase (proline iminopeptidase) from Aeromonas sobria SP|P46547, Propionibacterium freudenreichii subsp. shermanii GI:2415704, Hafnia alvei GI:1754489" 3 3 16 14 At3g61710 autophagy protein Apg6 family contains weak similarity to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam profile PF04111: Autophagy protein Apg6 3 3 16 15 At3g61750 auxin-responsive protein -related similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana]; 3 3 16 16 At3g61900 auxin-responsive family protein similar to auxin-induced protein SAUR-AC1 (GI:546362) (PIR:T06084) [Arabidopsis thaliana] 3 3 16 17 At3g61950 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 3 16 18 At4g00900 "calcium-transporting ATPase 2, endoplasmic reticulum-type (ECA2) nearly identical to SP|O23087 Calcium-transporting ATPase 2, endoplasmic reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana}; contains InterPro Accession IPR006069: Cation transporting ATPase" 3 3 16 19 At4g00950 expressed protein 3 3 16 20 At4g01090 extra-large G-protein-related contains weak similarity to extra-large G-protein [Arabidopsis thaliana] gi|3201682|gb|AAC19353 3 3 16 21 At4g01150 expressed protein 3 3 16 22 At4g01290 expressed protein 3 3 16 23 At4g01360 expressed protein 3 3 16 24 At4g01520 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365 : No apical meristem (NAM) protein 3 3 16 25 At4g01560 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 3 3 17 1 At4g04398 hypothetical protein 3 3 17 2 At4g04460 "aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 3 3 17 3 At4g04650 hypothetical protein 3 3 17 4 At4g04710 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 3 3 17 5 At4g04880 adenosine/AMP deaminase family protein low similarity to SP|P03958 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase) {Mus musculus}; contains Pfam profile PF00962: Adenosine/AMP deaminase 3 3 17 6 At4g04925 expressed protein 3 3 17 7 At4g05060 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 3 3 17 8 At4g05110 "equilibrative nucleoside transporter, putative (ENT6) identical to putative equilibrative nucleoside transporter ENT6 [Arabidopsis thaliana] GI:16518997; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter" 3 3 17 9 At4g09830 expressed protein 3 3 17 10 At4g09890 expressed protein 3 3 17 11 At4g10030 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 17 12 At4g10090 expressed protein 3 3 17 13 At4g10230 hypothetical protein 3 3 17 14 At4g10280 expressed protein 3 3 17 15 At4g10440 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 3 17 16 At4g10510 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 3 3 17 17 At4g13290 "cytochrome P450 71A19, putative (CYP71A19) Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis thaliana]; similar to cytochrome P450LIA1, Persea americana, M32885" 3 3 17 18 At4g13340 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 17 19 At4g13490 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 17 20 At4g13530 "expressed protein predicted protein, Arabidopsis thaliana" 3 3 17 21 At4g13700 serine/threonine protein phosphatase family protein contains Pfam domain PF00149: Ser/Thr protein phosphatase 3 3 17 22 At4g13740 expressed protein 3 3 17 23 At4g13870 Werner Syndrome-like exonuclease (WEX) contains Pfam profile PF01612: 3'-5' exonuclease; identical to Werner Syndrome-like exonuclease [Arabidopsis thaliana] GP:28195109 gb:AAO33765 3 3 17 24 At4g13930 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 3 3 17 25 At4g16280 "flowering time control protein / FCA gamma (FCA) identical to SP|O04425 Flowering time control protein FCA {Arabidopsis thaliana}; four alternative splice variants, one splicing isoform contains a non-consensus CA donor splice site, based on cDNA: gi:2204090" 3 3 18 1 At4g16340 "adapter protein SPIKE1 (SPK1) One model reflects the alignment of a full-length cDNA sequence gi:18496702. There are multiple frame shifts in the gene model resulting in a truncated protein. The alternate model includes modifications in exons 14, 17 and 29 to compensate for frame shifts and maximize the protein length. It is not based on EST data. adapter protein SPIKE1 [Arabidopsis thaliana] GI:18496703" 3 3 18 2 At4g16490 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 3 3 18 3 At4g16520 "autophagy 8f (APG8f) identical to autophagy 8f [Arabidopsis thaliana] GI:19912161; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 3 3 18 4 At4g16680 "RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 3 3 18 5 At4g16710 glycosyltransferase family protein 28 low similarity to C terminus subunit of GlcA transferase from Escherichia coli [GI:2586169]; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain 3 3 18 6 At4g16830 nuclear RNA-binding protein (RGGA) identical to nuclear RNA binding protein GI:6492264 from [Arabidopsis thaliana] 3 3 18 7 At4g16850 expressed protein 3 3 18 8 At4g19440 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 18 9 At4g19500 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. A false intron was added between exons 2 and 3 to circumvent a frameshift caused by a sequencing error, as per Blake Meyers (bcmeyers@vegmail.ucdavis.edu)" 3 3 18 10 At4g19650 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 3 18 11 At4g19690 "iron-responsive transporter (IRT1) identical to Fe(II) transport protein [Arabidopsis thaliana] gi|1353266|gb|AAB01678; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 18 12 At4g19870 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 3 3 18 13 At4g19925 "disease resistance protein (TIR class), putative contains Pfam profile PF01582: TIR domain" 3 3 18 14 At4g20070 peptidase M20/M25/M40 family protein contains similarity to hydantoin utilization protein C [Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam profile PF01546: Peptidase family M20/M25/M40 3 3 18 15 At4g20130 "ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase-related contains weak similarity to Swiss-Prot:P94026 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (Ribulose- bisphosphate-carboxylase]-lysine N-methyltransferase, RuBisCO methyltransferase, RuBisco LSMT, rbcMT) [Nicotiana tabacum]" 3 3 18 16 At4g22910 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to fizzy-related protein (GI:5813825) Drosophila melanogaster, PID:g2326419;" 3 3 18 17 At4g22970 peptidase C50 family protein contains Pfam PF03568: Peptidase family C50 3 3 18 18 At4g23140 receptor-like protein kinase 5 (RLK5) identical to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam domain PF00069: Protein kinase domain; identical to cDNA receptor-like protein kinase 5 (RLK5) GI:13506746 3 3 18 19 At4g23200 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 3 18 20 At4g23340 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin c20-oxidase [Pisum sativum] GI:6855711; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 3 3 18 21 At4g23400 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 3 18 22 At4g23540 "expressed protein probable membrane protein YPL012w, Saccharomyces cerevisiae, PIR2:S59681" 3 3 18 23 At4g23600 "coronatine-responsive tyrosine aminotransferase / tyrosine transaminase similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II; identical to cDNA coronatine-regulated tyrosine aminotransferase (F9D16.70) GI:15076852" 3 3 18 24 At4g26160 thioredoxin family protein low similarity to thioredoxin [Ictalurus punctatus] GI:9837585; contains Pfam profile: PF00085 Thioredoxin 3 3 18 25 At4g26210 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 3 3 19 1 At4g26370 antitermination NusB domain-containing protein contains Pfam profile: PF01029 NusB family 3 3 19 2 At4g26410 expressed protein 3 3 19 3 At4g26560 "calcineurin B-like protein, putative similar to calcineurin B-like protein 3 [Arabidopsis thaliana] GI:3309086, calcineurin B-like protein 2 [Arabidopsis thaliana] GI:3309084; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 3 19 4 At4g26600 "nucleolar protein, putative similar to SP|P46087 Proliferating-cell nucleolar antigen p120 (Proliferation-associated nucleolar protein p120) {Homo sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun family" 3 3 19 5 At4g26750 hydroxyproline-rich glycoprotein family protein 3 3 19 6 At4g26810 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 3 3 19 7 At4g29390 "40S ribosomal protein S30 (RPS30B) RIBOSOMAL PROTEIN S30 - Arabidopsis thaliana,PID:e1358183" 3 3 19 8 At4g29450 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 3 19 9 At4g29630 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 3 (CDA3) [Arabidopsis thaliana] GI:3818577, cytidine deaminase homolog DesF [Arabidopsis thaliana] GI:4836448; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 3 3 19 10 At4g29670 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin 3 3 19 11 At4g29830 "transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); G protein beta subunit-like protein, Schistosoma mansoni, gb:U30261" 3 3 19 12 At4g29870 "expressed protein predicted protein, Arabidopsis thaliana, PIR2:T01282" 3 3 19 13 At4g30040 "aspartyl protease family contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 3 19 14 At4g30100 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 3 3 19 15 At4g32580 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin 3 3 19 16 At4g32620 "expressed protein predicted protein T10M13.8, Arabidopsis thaliana" 3 3 19 17 At4g32800 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY - Arabidopsis thaliana, PIR2:T01076" 3 3 19 18 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 3 3 19 19 At4g32970 expressed protein low similarity to SP|Q13061 Triadin {Homo sapiens} 3 3 19 20 At4g33020 "metal transporter, putative (ZIP9) identical to putative metal transporter ZIP9 [Arabidopsis thaliana] gi|17385790|gb|AAL38435; similar to Zn and Cd transporter ZNT1 [Thlaspi caerulescens] gi|7381054|gb|AAF61374; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 19 21 At4g33180 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas fluorescens] GI:1871461; contains Pfam profile PF00561: alpha/beta hydrolase fold" 3 3 19 22 At4g33250 eukaryotic translation initiation factor 3 subunit 11 / eIF-3 p25 / eIF3k (TIF3K1) identical to Swiss-Prot:Q9SZA3 eukaryotic translation initiation factor 3 subunit 11 (eIF-3 p25) (eIF3k) [Arabidopsis thaliana]; identical to cDNA initiation factor 3k GI:12407752 3 3 19 23 AT5G57480 PC-1 C10 3 3 19 24 3XSSC PC-1 C22 3 3 19 25 AT1G29930 PC-1 G10 3 3 20 1 3XSSC PC-1 G22 3 3 20 2 AT3G44150 PC-1 K10 3 3 20 3 3XSSC PC-1 K22 3 3 20 4 AT4G00810 PC-1 O10 3 3 20 5 3XSSC PC-1 O22 3 3 20 6 At4g35810 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 3 3 20 7 At4g35870 expressed protein 3 3 20 8 At4g36020 "cold-shock DNA-binding family protein contains Pfam domains, PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle" 3 3 20 9 At4g36060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 3 20 10 At4g36210 expressed protein contains Pfam PF05277: Protein of unknown function (DUF726) 3 3 20 11 At4g36260 "zinc finger protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702), TIGR01624: LRP1 C-terminal domain, TIGR01623: putative zinc finger domain, LRP1 type" 3 3 20 12 At4g36450 "mitogen-activated protein kinase, putative / MAPK, putative (MPK14) mitogen-activated protein kinase (MAPK)(AtMPK14), PMID:12119167" 3 3 20 13 At4g36510 hypothetical protein 3 3 20 14 At4g39160 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 20 15 At4g39220 RER1A protein identical to SP|O48670 RER1A protein (AtRER1A) {Arabidopsis thaliana} 3 3 20 16 At4g39320 microtubule-associated protein-related contains weak similarity to microtubule-associated protein 1B (MAP 1B) (Swiss-Prot:P46821) [Homo sapiens] 3 3 20 17 At4g39370 "ubiquitin-specific protease 27, putative (UBP27) similar to GI:11993494; ubiquitin specific protease 66 - Gallus gallus,PID:g3800764" 3 3 20 18 At4g39530 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 20 19 At4g39560 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; contains Prosite PS00018: EF-hand calcium-binding domain 3 3 20 20 At4g39730 "lipid-associated family protein contains PLAT/LH2 (Polycystin-1, Lipoxygenase, Alpha-Toxin/Lipoxygenase homology) domain Pfam:PF01477" 3 3 20 21 At4g39760 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 3 3 20 22 At5g03300 adenosine kinase 2 (ADK2) contains Pfam profile: PF00294 pfkB family carbohydrate kinase; identical to cDNA adenosine kinase 2 (ADK2) GI:12017763 3 3 20 23 At5g03350 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 3 3 20 24 At5g03490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 20 25 At5g03545 "expressed protein No ATG start, annotated according to PMID:11123795" 3 3 21 1 At5g03710 hypothetical protein 3 3 21 2 At5g03770 "3-deoxy-D-manno-octulosonic acid transferase-related similar to 3-deoxy-D-manno-octulosonic acid transferase, Escherichia coli, PIR:JU0467; contains Pfam profile PF04413: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)" 3 3 21 3 At5g03940 "signal recognition particle 54 kDa protein, chloroplast / 54 chloroplast protein / SRP54 (FFC) identical to Swiss-Prot:P37107 signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) [Arabidopsis thaliana]" 3 3 21 4 At5g04000 expressed protein 3 3 21 5 At5g06580 "FAD linked oxidase family protein similar to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 3 3 21 6 At5g06640 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 3 21 7 At5g06805 reverse transcriptase-related low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278 3 3 21 8 At5g06860 "polygalacturonase inhibiting protein 1 (PGIP1) identical to polygalacturonase inhibiting protein 1 (PGIP1) [Arabidopsis thaliana] gi|7800199|gb|AAF69827; contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 3 3 21 9 At5g07020 proline-rich family protein 3 3 21 10 At5g07080 "transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase - Taxus cuspidata, AF193765, EMBL:AF193765; contains Pfam transferase family domain PF00248" 3 3 21 11 At5g07230 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein identical to tapetum-specific protein A9 [Precursor] SP| Q00762; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 3 21 12 At5g07290 "RNA recognition motif (RRM)-containing protein Mei2-like protein - Arabidopsis thaliana, EMBL:D86122" 3 3 21 13 At5g10380 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 21 14 At5g10440 "cyclin family protein similar to cyclin D2.1 protein [Nicotiana tabacum] GI:4160298; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 3 21 15 At5g10600 "cytochrome P450 family protein similar to Cytochrome P450 91A1 (SP:Q9FG65) {Arabidopsis thaliana} ; cytochrome P450, Helianthus tuberosus, EMBL:HTCYP81L" 3 3 21 16 At5g10660 calmodulin-binding protein-related contains weak similarity to calmodulin-binding proteins 3 3 21 17 At5g10800 "RNA recognition motif (RRM)-containing protein KIAA0332 gene, Homo sapiens, EMBL:HSAB2330" 3 3 21 18 At5g10860 CBS domain-containing protein contains Pfam profile PF00571: CBS domain 3 3 21 19 At5g11020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 3 21 20 At5g11080 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 3 21 21 At5g14220 "protoporphyrinogen oxidase, putative similar to protoporphyrinogen IX oxidase, mitochondrial (PPO II) from Nicotiana tabacum [SP|O24164], Glycine max, AB025102, Spinacia oleracea [GI:14349153]; contains Pfam amine oxidase, flavin-containing domain [PF015930]" 3 3 21 22 At5g14270 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 3 3 21 23 At5g14450 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, pollen-expressed coil protein [Medicago sativa] GI:1110502; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 3 3 21 24 At5g14510 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 3 3 21 25 At5g14660 "peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B) identical to SP|Q9FUZ2 Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi|11320965|gb|AF269165.1|AF269165" 3 3 22 1 At5g14720 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 3 22 2 At5g14900 helicase associated (HA2) domain-containing protein similar to SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43 (Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam profile PF04408: Helicase associated domain (HA2) 3 3 22 3 At5g14950 glycosyl hydrolase family 38 protein similar to alpha-mannosidase II SP:P27046 from [Mus musculus] 3 3 22 4 At5g17630 "glucose-6-phosphate/phosphate translocator, putative similar to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] gi|2997593|gb|AAC08526" 3 3 22 5 At5g17690 like heterochromatin protein (LHP1) identical to like heterochromatin protein LHP1 [Arabidopsis thaliana] GI:15625407; contains Pfam profile PF00385: 'chromo' (CHRromatin Organization MOdifier) 3 3 22 6 At5g17830 "hypothetical protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 3 3 22 7 At5g17890 "LIM domain-containing protein / disease resistance protein-related low similarity to disease resistance protein RPP4 [Arabidopsis thaliana] GI:20270890; contains Pfam profiles PF00412: LIM domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat" 3 3 22 8 At5g18070 "phosphoglucosamine mutase-related similar to SP|Q9P4V2 Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) {Candida albicans}; contains Pfam profiles PF00408: Phosphoglucomutase/phosphomannomutase C-terminal domain, PF02878: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I" 3 3 22 9 At5g18130 expressed protein similar to unknown protein (gb|AAF00631.1) 3 3 22 10 At5g18270 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 3 3 22 11 At5g18310 "expressed protein predicted proteins, Drosophila melanogaster" 3 3 22 12 At5g20920 "eukaryotic translation initiation factor 2 subunit 2, putative / eIF-2-beta, putative similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5" 3 3 22 13 At5g20960 aldehyde oxidase 1 (AAO1) identical to aldehyde oxidase AAO1 from Arabidopsis thaliana [gi:3172023] isoform contains a GA-donor splice site at intron 10 3 3 22 14 At5g21120 ethylene-insensitive3-like2 (EIL2) identical to ethylene-insensitive3-like2 (EIL2) GI:2224929 from [Arabidopsis thaliana] 3 3 22 15 At5g21170 "5'-AMP-activated protein kinase beta-2 subunit, putative similar to Swiss-Prot:Q9QZH4 5'-AMP-activated protein kinase, beta-2 subunit (AMPK beta-2 chain) [Rattus norvegicus]" 3 3 22 16 At5g22010 "AAA-type ATPase family protein / BRCT domain-containing protein contains Pfam profiles: PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase family associated with various cellular activities (AAA)" 3 3 22 17 At5g22050 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 3 3 22 18 At5g22200 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 3 3 22 19 At5g22260 "male sterility 1 protein, putative (MS1) identical to male sterility 1 protein [Arabidopsis thaliana] gi|15554513|emb|CAC69663 PMID:11696184; contains Pfam profile PF00628: PHD-finger; identical to cDNA male sterility 1 protein (ms1 gene) GI:15554514" 3 3 22 20 At5g24890 expressed protein weak similarity to MTD1 [Medicago truncatula] GI:9294810 3 3 22 21 At5g24950 "cytochrome P450 71A15, putative (CYP71A15) identical to Cytochrome P450 71A15 (SP:P58046). [Arabidopsis thaliana]; cytochrome P-450LIA1 - Persea americana (avocado), EMBL:M32885" 3 3 22 22 At5g25130 "cytochrome P450 family protein CYTOCHROME P450 71B1 - Thlaspi arvense, EMBL:L24438" 3 3 22 23 At5g25190 "ethylene-responsive element-binding protein, putative ethylene responsive element binding protein homolog, Stylosanthes hamata, EMBL:U91857" 3 3 22 24 At5g25350 F-box family protein contains Pfam PF00646: F-box domain and Pfam PF00560: Leucine Rich Repeat (6 copies); similar to F-box protein FBL6 (GI:4432860) [Homo sapiens] 3 3 22 25 At5g25390 "AP2 domain-containing transcription factor, putative AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] EMBL:AF003097" 3 3 23 1 At5g25510 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 3 3 23 2 At5g25550 leucine-rich repeat family protein / extensin family protein similar to leucine-rich repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]; contains Pfam PF00560: Leucine Rich Repeat domains 3 3 23 3 At5g28560 hypothetical protein 3 3 23 4 At5g28620 protein kinase C-related contains weak similarity to protein kinase C beta [Homo sapiens] gi|633224|emb|CAA44393 3 3 23 5 At5g28785 hypothetical protein 3 3 23 6 At5g28830 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 3 23 7 At5g29000 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 23 8 At5g29560 Ca+2-binding EF hand family protein contains similarity to Ca+2-binding EF hand protein GI:2270994 from [Glycine max] 3 3 23 9 At5g31787 hypothetical protein 3 3 23 10 At5g32410 hypothetical protein 3 3 23 11 At5g37570 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 23 12 At5g37630 "chromosome condensation family protein contains pfam profile: PF04154 chromosome condensation protein 3, C-terminal region" 3 3 23 13 At5g37820 major intrinsic family protein / MIP family protein contains Pfam profile: PF00230 major intrinsic protein (MIP) 3 3 23 14 At5g37880 "hypothetical protein predicted protein, Arabidopsis thaliana" 3 3 23 15 At5g38050 hypothetical protein 3 3 23 16 At5g38110 "ASF1-like anti-silencing family protein similar to SP|P32447 Anti-silencing protein 1 {Saccharomyces cerevisiae}; contains Pfam profile PF04729: Anti-silencing protein, ASF1-like" 3 3 23 17 At5g38280 serine/threonine protein kinase (PR5K) identical to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208 3 3 23 18 At5g38340 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 23 19 At5g41170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 23 20 At5g41240 "glutathione S-transferase, putative similar to glutathione S-transferase, GST 10b GB:CAA10662 [Arabidopsis thaliana] 37349." 3 3 23 21 At5g41410 homeodomain protein (BEL1) identical to cDNA homeobox protein (BEL1) GI:28202124 3 3 23 22 At5g41480 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS1) nearly identical to GI:17976703; identical to cDNA dihydrofolate synthetase/folylpolyglutamate synthetase (dhfs/fpgs1 gene) GI:17976702 3 3 23 23 At5g41650 lactoylglutathione lyase family protein / glyoxalase I family protein contains Pfam profile PF00903: glyoxalase family protein 3 3 23 24 At5g41690 "polyadenylate-binding protein, putative / PABP, putative similar to poly(A)-binding protein GI:7673355 from [Nicotiana tabacum]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 3 3 23 25 At5g41840 F-box family protein contains F-box domain Pfam:PF00646 3 3 24 1 At5g41900 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas putida] GI:2822275; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 24 2 At5g44550 integral membrane family protein similar to unknown protein (pir||T10581) This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 3 3 24 3 At5g44590 hypothetical protein 3 3 24 4 At5g44730 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q94915 Rhythmically expressed gene 2 protein (DREG-2) {Drosophila melanogaster}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 3 24 5 At5g44770 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 3 24 6 At5g44930 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 3 24 7 At5g44990 hypothetical protein 3 3 24 8 At5g45130 Ras-related protein (RHA1) / small GTP-binding protein identical to Ras-related protein RHA1 SP:P31582 from [Arabidopsis thaliana] 3 3 24 9 At5g45190 "cyclin family protein similar to cyclin T1 [Equus caballus] GI:5052355; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 3 24 10 At5g47730 "SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative similar to polyphosphoinositide binding protein SEC14 homolog Ssh1p (GI:2739044) {Glycine max}" 3 3 24 11 At5g47790 forkhead-associated domain-containing protein / FHA domain-containing protein 3 3 24 12 At5g47940 expressed protein 3 3 24 13 At5g48000 cytochrome P450 family protein similar to steroid 22-alpha-hydroxylase; DWF4; CYP90B1 (GI:2935342) [Arabidopsis thaliana] 3 3 24 14 At5g48175 expressed protein contains weak similarity to thioglucoside glucohydrolase (GI:5524767) [Arabidopsis thaliana] 3 3 24 15 At5g48230 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 3 3 24 16 At5g48385 expressed protein 3 3 24 17 At5g48430 "expressed protein low similarity to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741, SP|P13917 Basic 7S globulin precursor {Glycine max}; expression supported by MPSS" 3 3 24 18 At5g51130 expressed protein contains similarity to unknown protein (pir||T26512) 3 3 24 19 At5g51180 expressed protein 3 3 24 20 At5g51320 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 3 3 24 21 At5g51380 F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein FBL2 (GI:6063090) [Homo sapiens] 3 3 24 22 At5g51550 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region 3 3 24 23 At5g51610 ribosomal protein L11 family protein 3 3 24 24 At5g51750 subtilase family protein similar to subtilisin-like protease GI:3687307 from [Lycopersicon esculentum] 3 3 24 25 At5g51800 expressed protein 3 3 25 1 At5g54560 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 3 3 25 2 At5g54590 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 3 25 3 At5g54745 DegP protease family contains similarity to DegP2 protease [Arabidopsis thaliana] gi|13172275|gb|AAK14061 3 3 25 4 At5g54800 "glucose-6-phosphate/phosphate translocator, putative identical to glucose 6 phosphate/phosphate translocator [Arabidopsis thaliana] gi|7229675|gb|AAF42936" 3 3 25 5 At5g54940 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 3 3 25 6 At5g54990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 3 3 25 7 At5g55130 "molybdenum cofactor synthesis protein 3 / molybdopterin synthase sulphurylase (CNX5) identical to SP|Q9ZNW0 Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) {Arabidopsis thaliana}; contains Pfam profiles PF00899: ThiF family, PF00581: Rhodanese-like domain, PF05237: MoeZ/MoeB domain" 3 3 25 8 At5g55170 small ubiquitin-like modifier 3 (SUMO) similar to SP|O13351 Ubiquitin-like protein smt3/pmt3 {Schizosaccharomyces pombe}; identical to cDNA small ubiquitin-like modifier 3 (SUMO) GI:22652845 3 3 25 9 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 3 3 25 10 At5g57890 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta chain GI:403434 [Arabidopsis thaliana]" 3 3 25 11 At5g58060 SNARE protein-related similar to SNARE protein Ykt6 [Homo sapiens] GI:2507637 3 3 25 12 At5g58120 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 25 13 At5g58260 expressed protein 3 3 25 14 At5g58320 kinase interacting protein-related low similarity to kinase interacting protein 1 [Petunia integrifolia] GI:13936326 3 3 25 15 At5g58450 "expressed protein predicted proteins from D.melanogaster, C.elegans and S.pombe" 3 3 25 16 At5g58510 "expressed protein KIAA0066, Homo sapiens, EMBL:HSORFKG1O" 3 3 25 17 At5g61100 hypothetical protein 3 3 25 18 At5g61150 leo1-like family protein weak similarity to SP|P38439 LEO1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04004: Leo1-like protein; supporting cDNA gi|21929714|gb|AF490422.1| 3 3 25 19 At5g61310 "cytochrome c oxidase subunit Vc, putative / COX5C, putative similar to cytochrome c oxidase subunit 5c [Helianthus annuus] GI:18409602; contains Pfam profile PF05799: Cytochrome c oxidase subunit Vc (COX5C)" 3 3 25 20 At5g61360 expressed protein 3 3 25 21 At5g61520 "hexose transporter, putative similar to hexose carrier protein hex6 {Ricinus communis} SP|Q07423; contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 25 22 At5g61540 "L-asparaginase, putative / L-asparagine amidohydrolase, putative similar to Swiss-Prot:O02467 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (Glycosylasparaginase) (Aspartylglucosaminidase)(N4-(N-acetyl-beta- glucosaminyl)-L-asparagine amidase) (AGA)[Spodoptera frugiperda]" 3 3 25 23 At5g61700 "ABC transporter family protein ABC family transporter, Entamoeba histolytica, EMBL:EH058" 3 3 25 24 At5g61760 "inositol polyphosphate 6-/3-/5-kinase 2b (IPK2b) contains Pfam domain, PF03770: inositol polyphosphate kinase" 3 3 25 25 At5g64450 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 3 26 1 At5g64480 expressed protein 3 3 26 2 At5g64630 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] 3 3 26 3 At5g64680 expressed protein 3 3 26 4 At5g64816 expressed protein 3 3 26 5 At5g64850 expressed protein 3 3 26 6 At5g65000 nucleotide-sugar transporter family protein low similarity to SP|Q9Y2D2 UDP N-acetylglucosamine transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 3 3 26 7 At5g65040 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 26 8 At5g67580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 26 9 At5g67640 expressed protein ; expression supported by MPSS 3 3 26 10 At4g09270 hypothetical protein same aa sequence as protein T8A17_30 because of location on repetitive section 3 3 26 11 At5g50690 "short-chain dehydrogenase/reductase (SDR) family protein similar to steroleosin [Sesamum indicum] GI:15824408; contains Pfam profile PF00106: oxidoreductase, short chain dehydrogenase/reductase family" 3 3 26 12 ath-MIR164b miRNA gene Arabidopsis thaliana miR164b stem-loop 3 3 26 13 ath-MIR160a miRNA gene Arabidopsis thaliana miR160a stem-loop 3 3 26 14 ath-MIR399b miRNA gene Arabidopsis thaliana miR399b stem-loop 3 3 26 15 ath-MIR159c miRNA gene Arabidopsis thaliana miR159c stem-loop 3 3 26 16 At3g43890 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 3 26 17 At3g43950 hypothetical protein 3 3 26 18 At3g44120 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 3 26 19 At3g44180 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis thaliana]" 3 3 26 20 At3g44360 "expressed protein predicted protein, Arabidopsis thaliana" 3 3 26 21 At3g44450 expressed protein 3 3 26 22 At3g44610 "protein kinase family protein similar to viroid symptom modulation protein (protein kinase)[Lycopersicon esculentum] gi|7672777|gb|AAF66637; contains protein kinase domain, Pfam:PF00069" 3 3 26 23 At3g44680 "histone deacetylase, putative similar to histone deacetylase-1 (HD-1) [Gallus gallus] GI:2791684; contains Pfam profile PF00850: Histone deacetylase family; identical to cDNA histone deacetylase partial cds GI:21637258" 3 3 26 24 Blank Blank 3 3 26 25 Blank Blank 3 4 1 1 atc04 Randomly generated negative control 3 4 1 2 atc10 Randomly generated negative control 3 4 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 4 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 3 4 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 3 4 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 3 4 1 7 atc08 Randomly generated negative control 3 4 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 3 4 1 9 At1g02840 pre-mRNA splicing factor SF2 (SF2) / SR1 protein identical to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana} 3 4 1 10 At1g02850 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 3 4 1 11 At1g02965 hypothetical protein 3 4 1 12 At1g03000 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 3 4 1 13 At1g03130 "photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD2) similar to SP|P12353 Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) {Spinacia oleracea}; contains Pfam profile PF02531: PsaD" 3 4 1 14 At1g03190 DNA repair protein / transcription factor protein (UVH6) identical to DNA repair/transcription factor protein (UVH6) gi:22651569 gb:AY090788 3 4 1 15 At1g03370 "C2 domain-containing protein / GRAM domain-containing protein contains Pfam profiles PF00168: C2 domain; contains PF02893: GRAM domain; similar to Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus]" 3 4 1 16 At1g03430 "two-component phosphorelay mediator, putative strong similarity to ATHP1 [Arabidopsis thaliana] GI:4156241" 3 4 1 17 At1g06090 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase GB:BAA25180 GI:2970034 (ADS1) from [Arabidopsis thaliana] 3 4 1 18 At1g06130 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme GB:AAC49865 GI:2570338 from [Arabidopsis thaliana]" 3 4 1 19 At1g06270 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 1 20 At1g06340 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 4 1 21 At1g06510 expressed protein 3 4 1 22 At1g06570 4-hydroxyphenylpyruvate dioxygenase (HPD) identical to 4-hydroxyphenylpyruvate dioxygenase (HPD) SP:P93836 [Arabidopsis thaliana (Mouse-ear cress)] 3 4 1 23 At1g06750 hypothetical protein 3 4 1 24 At1g06790 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 3 4 1 25 At1g09280 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) 3 4 2 1 At1g09340 expressed protein 3 4 2 2 At1g09500 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 3 4 2 3 At1g09540 myb family transcription factor (MYB61) contains PFAM profile: myb DNA-binding domain PF00249 3 4 2 4 At1g09680 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 2 5 At1g09740 "ethylene-responsive protein, putative similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family" 3 4 2 6 At1g09880 hypothetical protein 3 4 2 7 At1g09932 phosphoglycerate/bisphosphoglycerate mutase-related weak hit to Pfam profile PF00300: phosphoglycerate mutase family 3 4 2 8 At1g12520 "superoxide dismutase copper chaperone, putative similar to copper chaperone for superoxide dismutase [Homo sapiens] gi|2431868|gb|AAC51764" 3 4 2 9 At1g12580 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains similarity to calcium-dependent protein kinase GI:5162877 from [Marchantia polymorpha]" 3 4 2 10 At1g12770 "DEAD/DEAH box helicase family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles: PF00271 helicase conserved C-terminal domain, PF01535 PPR repeat, PF00270: DEAD/DEAH box helicase" 3 4 2 11 At1g12820 "transport inhibitor response protein, putative E3 ubiquitin ligase SCF complex F-box subunit; similar to transport inhibitor response 1 GI:2352492 from [Arabidopsis thaliana]" 3 4 2 12 At1g12990 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327]; contains Pfam profile PF04724 :Glycosyltransferase family 17" 3 4 2 13 At1g13060 20S proteasome beta subunit E1 (PBE1) (PRCE) identical to GB:O23717; identical to cDNA proteasome subunit prce GI:2511595 3 4 2 14 At1g13220 nuclear matrix constituent protein-related similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 3 4 2 15 At1g13270 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 3 4 2 16 At1g15920 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 3 4 2 17 At1g15960 "NRAMP metal ion transporter 6, putative (NRAMP6) identical to putative metal transporter [Arabidopsis thaliana] gi|12666983|emb|CAC28123; similar to NRAMP1 protein [Arabidopsis thaliana] gi|7108911|gb|AAF36535; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563; contains a possible frameshift" 3 4 2 18 At1g16130 "wall-associated kinase, putative similar to putative serine/threonine-specific protein kinase GI:7270012 from [Arabidopsis thaliana]" 3 4 2 19 At1g16190 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]" 3 4 2 20 At1g16370 "transporter-related low similarity to organic cation transporter OCTN1 from [Homo sapiens] GI:2605501, [Mus musculus] GI:4126605, [Rattus norvegicus] GI:5679326; contains Pfam profile PF00083: major facilitator superfamily protein" 3 4 2 21 At1g16410 "cytochrome P450, putative similar to gb|AF069494 cytochrome P450 from Sinapis alba and is a member of the PF|00067 Cytochrome P450 family" 3 4 2 22 At1g16570 "glycosyl transferase family 1 protein contains similarity to mannosyltransferase GI:1800223 from Dictyostelium discoideum; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 3 4 2 23 At1g16640 transcriptional factor B3 family protein low similarity to reproductive meristem protein 1 [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain 3 4 2 24 At1g19430 dehydration-responsive protein-related low similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 4 2 25 At1g19485 "AT hook motif-containing protein contains Pfam profile: PF00730 HhH-GPD superfamily base excision DNA repair protein; contains Pfam PF02178: AT hook motif; contains Pfam PF00400: WD domain, G-beta repeat (5 copies); contains Prosite PS00354: HMG-I and HMG-Y DNA-binding domain (A+T-hook)" 3 4 3 1 At1g19670 coronatine-responsive protein / coronatine-induced protein 1 (CORI1) identical to coronatine-induced protein 1 (CORI1) GI:30912637 from [Arabidopsis thaliana] 3 4 3 2 At1g19720 "pentatricopeptide (PPR) repeat-containing protein nearly identical over 405 amino acids to DYW7 protein of unknown function GB:CAA06829 from [Arabidopsis thaliana] (Plant Mol. Biol. 42 (4), 603-613 (2000)); contains Pfam profile PF01535: PPR repeat" 3 4 3 3 At1g19920 sulfate adenylyltransferase 2 / ATP-sulfurylase 2 (ASA1) (MET3-1) (APS2) identical to ATP sulfurylase (APS2) [Arabidopsis thaliana] GI:1575324 3 4 3 4 At1g19980 cytomatrix protein-related contains weak similarity to CAST1 [Rattus norvegicus] gi|22138113|gb|AAL07517 3 4 3 5 At1g20180 hypothetical protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana] 3 4 3 6 At1g20240 hypothetical protein 3 4 3 7 At1g22960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 3 8 At1g23010 multi-copper oxidase type I family protein similar to SP|P07788 Spore coat protein A {Bacillus subtilis}; contains Pfam profile PF00394: Multicopper oxidase 3 4 3 9 At1g23150 expressed protein 3 4 3 10 At1g23205 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Phaseolus vulgaris SP|Q43111, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 3 4 3 11 At1g23360 "UbiE/COQ5 methyltransferase family protein similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase GB:BAA25267 GI:2982680 from [Micrococcus luteus]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 3 4 3 12 At1g23390 "kelch repeat-containing F-box family protein similar to hypothetical protein GB:AAF27090 GI:6730669 from (Arabidopsis thaliana); contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 4 3 13 At1g23530 expressed protein 3 4 3 14 At1g23590 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 3 4 3 15 At1g27310 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 3 4 3 16 At1g27360 squamosa promoter-binding protein-like 11 (SPL11) identical to squamosa promoter binding protein-like 11 [Arabidopsis thaliana] GI:5931665; contains Pfam profile PF03110: SBP domain 3 4 3 17 At1g27470 transducin-related / WD-40 repeat protein-related contains 6 WD-40 repeats (PF00400) (2 weak); related to KIAA1988 protein (GI:18916910) [Homo sapiens] 3 4 3 18 At1g27530 expressed protein Similar to gb|AF151884 CGI-126 protein from Homo sapiens. EST gb|Z18048 comes from this gene 3 4 3 19 At1g27690 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 3 4 3 20 At1g27740 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 4 3 21 At1g27910 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 3 4 3 22 At1g27970 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 3 4 3 23 At1g30870 "cationic peroxidase, putative similar to cationic peroxidase (gi|1232069); similar to EST gb|AI100412" 3 4 3 24 At1g30930 F-box family protein contains F-box domain Pfam:PF00646 3 4 3 25 At1g31150 expressed protein EST gb|Z33866 comes from this gene 3 4 4 1 At1g31190 inositol monophosphatase family protein similar to SP|P29218 Myo-inositol-1(or 4)-monophosphatase (EC 3.1.3.25) (Inositol monophosphatase) {Homo sapiens}; contains Pfam profile PF00459: Inositol monophosphatase family; EST gb|AA597395 comes from this gene 3 4 4 2 At1g31370 expressed protein ; expression supported by MPSS 3 4 4 3 At1g31430 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 4 4 4 At1g31640 MADS-box protein-related contains INTERPRO:IPR02100 MADS-box domain ;similar to MADS box transcription factor GI:3688589 from [Triticum aestivum] 3 4 4 5 At1g31710 "copper amine oxidase, putative similar to copper amine oxidase [Lens culinaris] gi|15451834|gb|AAB34918" 3 4 4 6 At1g34760 "14-3-3 protein GF14 omicron (GRF11) identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron (General regulatory factor 11){Arabidopsis thaliana}" 3 4 4 7 At1g34910 hypothetical protein 3 4 4 8 At1g35250 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 3 4 4 9 At1g35340 ATP-dependent protease La (LON) domain-containing protein contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 3 4 4 10 At1g35530 "DEAD/DEAH box helicase, putative low similarity to RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 4 4 11 At1g35610 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 3 4 4 12 At1g35820 hypothetical protein 3 4 4 13 At1g35900 hypothetical protein 3 4 4 14 At1g47480 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 3 4 4 15 At1g47510 "endonuclease/exonuclease/phosphatase family protein similar to SP|P32019 Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.56) {Homo sapiens}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family" 3 4 4 16 At1g47690 hypothetical protein 3 4 4 17 At1g47760 MADS-box protein (AGL102) contains similarity to MADS-box protein GB:AAC26702 GI:3128222 from [Arabidopsis thaliana]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 3 4 4 18 At1g47900 expressed protein 3 4 4 19 At1g47980 expressed protein 3 4 4 20 At1g48140 "dolichol-phosphate mannosyltransferase-related contains weak similarity to Swiss-Prot:Q9P2X0 dolichol-phosphate mannosyltransferase subunit 3 (Dolichol-phosphate mannose synthase subunit 3, Dolichyl-phosphate beta-D- mannosyltransferase subunit 3, Mannose-P-dolichol synthase subunit 3, MPD synthase subunit 3, DPM synthase complex subunit 3, Prostin 1 [Homo sapiens]" 3 4 4 21 At1g48180 expressed protein ; expression supported by MPSS 3 4 4 22 At1g51250 expressed protein similar to hypothetical protein GB:AAD30637 3 4 4 23 At1g51310 tRNA methyl transferase family protein contains Pfam PF03054: tRNA methyl transferase profile; similar to tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61). (Swiss-Prot:Q8ZPZ4) [Salmonella typhimurium] 3 4 4 24 At1g51450 "SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to DEAD box protein DDX1 [Gallus gallus] GI:16323037, ryanodine receptor [Caenorhabditis elegans] GI:1871447; contains Pfam profile PF00622: SPRY domain" 3 4 4 25 At1g51510 "RNA-binding protein, putative similar to RNA-binding protein 8 (Ribonucleoprotein RBM8) SP:Q9Y5S9 from [Homo sapiens], RNA-binding protein Y14 [Xenopus laevis] GI:11034807; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 3 4 5 1 At1g51650 "ATP synthase epsilon chain, mitochondrial identical to ATP synthase epsilon chain, mitochondrial SP:Q96253 from [Arabidopsis thaliana]" 3 4 5 2 At1g51690 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to 55 kDa B regulatory subunit of phosphatase 2A (GI:710330) [Arabidopsis thaliana]; similar to type 2A protein serine/threonine phosphatase 55 kDa B regulatory GI:1408460 [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 3 4 5 3 At1g51840 protein kinase-related contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 3 4 5 4 At1g51900 hypothetical protein 3 4 5 5 At1g54520 expressed protein 3 4 5 6 At1g54575 expressed protein 3 4 5 7 At1g54760 MADS-box family protein similar to MADS-box transcription factor GI:4837612 from [Antirrhinum majus] 3 4 5 8 At1g54820 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 5 9 At1g54960 "NPK1-related protein kinase, putative (ANP2) similar to protein kinase [Nicotiana tabacum] gi|456309|dbj|BAA05648; identical to cDNA NPK1-related protein kinase 2, partial cds GI:2342424" 3 4 5 10 At1g55020 lipoxygenase (LOX1) identical to SP|Q06327 3 4 5 11 At1g55210 disease resistance response protein-related/ dirigent protein-related smimilar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 4 5 12 At1g55260 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 4 5 13 At1g59725 "DNAJ heat shock protein, putative similar to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 3 4 5 14 At1g59780 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 4 5 15 At1g59900 "pyruvate dehydrogenase E1 component alpha subunit, mitochondrial (PDHE1-A) identical to SP|P52901 Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) {Arabidopsis thaliana}" 3 4 5 16 At1g59960 "aldo/keto reductase, putative similar to NADPH-dependent codeinone reductase GI:6478210 [Papaver somniferum], NAD(P)H dependent 6'-deoxychalcone synthase [Glycine max][GI:18728]" 3 4 5 17 At1g60140 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 3 4 5 18 At1g60220 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 4 5 19 At1g60450 "galactinol synthase, putative similar to galactinol synthase GI:5608497 from [Ajuga reptans]; contains Pfam profile: PF01501 glycosyl transferase family 8" 3 4 5 20 At1g60540 "dynamin family protein similar to SP|Q91192 Interferon-induced GTP-binding protein Mx {Oncorhynchus mykiss}; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 3 4 5 21 At1g63340 flavin-containing monooxygenase-related / FMO-related low similarity to flavin-containing monooxygenase 2 (FMO2) from Homo sapiens [SP|Q99518] 3 4 5 22 At1g63400 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR-repeats Pfam profile: PF01535 3 4 5 23 At1g63590 receptor-like protein kinase-related contains Pfam PF01657: Domain of unknown function; similar to receptor-like protein kinase 4 (GI:13506745) {Arabidopsis thaliana} 3 4 5 24 At1g63640 kinesin motor protein-related C-terminal region is similar to C-term region of kinesin motor protein GB:AAB51397 (Mus musculus); contains Pfam profile: PF00225 Kinesin motor domain 3 4 5 25 At1g63770 peptidase M1 family protein similar to SP|P04825 Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) {Escherichia coli}; contains Pfam profile PF01433: Peptidase family M1 3 4 6 1 At1g63830 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains 1 predicted transmembrane domain" 3 4 6 2 At1g63970 "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GI:7621712 from [Catharanthus roseus]" 3 4 6 3 At1g64010 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 3 4 6 4 At1g66810 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 4 6 5 At1g66870 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 3 4 6 6 At1g67035 expressed protein ; expression supported by MPSS 3 4 6 7 At1g67090 "ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) identical to SP|P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) {Arabidopsis thaliana}" 3 4 6 8 At1g67270 hypothetical protein 3 4 6 9 At1g67310 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from[Nicotiana tabacum] 3 4 6 10 At1g67480 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 4 6 11 At1g67540 expressed protein ; expression supported by MPSS 3 4 6 12 At1g70180 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 3 4 6 13 At1g70220 hypothetical protein 3 4 6 14 At1g70410 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 3 4 6 15 At1g70450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 6 16 At1g70580 "glutamate:glyoxylate aminotransferase 2 (GGT2) identical to glutamate:glyoxylate aminotransferase 2 [Arabidopsis thaliana] GI:24461829; similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GI:4730884 from Oryza sativa; contains Pfam profile PF00155: aminotransferase, classes I and II" 3 4 6 17 At1g70620 cyclin-related contains weak similarity to Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I) [Bos taurus] 3 4 6 18 At1g70790 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 3 4 6 19 At1g70830 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 3 4 6 20 At1g73655 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 4 6 21 At1g73710 "pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587, post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat" 3 4 6 22 At1g73875 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 4 6 23 At1g73930 expressed protein 3 4 6 24 At1g74080 myb family transcription factor (MYB122) contains Pfam profile: PF00249 myb-like DNA-binding domain 3 4 6 25 At1g74140 hypothetical protein 3 4 7 1 At1g74320 "choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375" 3 4 7 2 At1g74370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 4 7 3 AT5G57480 PC-1 D10 3 4 7 4 3XSSC PC-1 D22 3 4 7 5 AT1G29930 PC-1 H10 3 4 7 6 3XSSC PC-1 H22 3 4 7 7 AT3G44150 PC-1 L10 3 4 7 8 3XSSC PC-1 L22 3 4 7 9 AT4G00810 PC-1 P10 3 4 7 10 3XSSC PC-1 P22 3 4 7 11 At1g77130 "glycogenin glucosyltransferase (glycogenin)-related contains similarity to glycogenin-1 from Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730], Homo sapiens [SP|P46976]" 3 4 7 12 At1g77180 "chromatin protein family contains Pfam domain, PF02731: SKIP/SNW domain found in chromatin proteins." 3 4 7 13 At1g77370 "glutaredoxin, putative similar to glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699" 3 4 7 14 At1g77420 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 4 7 15 At1g77600 expressed protein weak similarity to Pds5 (GI:16751524) [Schizosaccharomyces pombe]; weak similarity to androgen-induced prostate proliferative shutoff associated protein (GI:4559410) [Homo sapiens] 3 4 7 16 At1g77655 expressed protein 3 4 7 17 At1g77800 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 3 4 7 18 At1g77840 "eukaryotic translation initiation factor 5, putative / eIF-5, putative similar to SP|P55876 Eukaryotic translation initiation factor 5 (eIF-5) {Zea mays}; contains Pfam profiles PF02020: eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in IF2B/IF5" 3 4 7 19 At1g80410 "acetyltransferase-related low similarity to acetyltransferase Tubedown-1 [Mus musculus] GI:8497318, N-TERMINAL ACETYLTRANSFERASE GB:P12945 from (Saccharomyces cerevisiae); contains Pfam profile PF00515 TPR Domain" 3 4 7 20 At1g80460 "glycerol kinase, putative similar to glycerol kinase (ATP:glycerol 3-phosphotransferase, Glycerokinase, GK)[Mycobacterium tuberculosis] Swiss-Prot:O69664" 3 4 7 21 At1g80640 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 7 22 At1g80700 expressed protein 3 4 7 23 At1g80860 expressed protein 3 4 7 24 At1g80910 expressed protein 3 4 7 25 At2g01100 expressed protein 3 4 8 1 At2g01140 "fructose-bisphosphate aldolase, putative similar to plastidic aldolase NPALDP1 from Nicotiana paniculata [GI:4827251]; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 3 4 8 2 At2g04060 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P49676 from [Brassica oleracea]" 3 4 8 3 At2g04100 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 3 4 8 4 At2g04360 expressed protein 3 4 8 5 At2g04410 expressed protein 3 4 8 6 At2g04570 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 3 4 8 7 At2g04660 "E3 ubiquitin ligase, putative E3, ubiquitin ligase; contains similarity to anaphase-promoting complex subunit 2 GI:6180009 from [Homo sapiens]" 3 4 8 8 At2g04860 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 4 8 9 At2g04910 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 3 4 8 10 At2g12140 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 3 4 8 11 At2g12320 hypothetical protein 3 4 8 12 At2g12945 hypothetical protein 3 4 8 13 At2g13270 hypothetical protein 3 4 8 14 At2g13610 ABC transporter family protein 3 4 8 15 At2g13650 GDP-mannose transporter (GONST1) identical to GDP-mannose transporter SP:Q941R4 from [Arabidopsis thaliana] 3 4 8 16 At2g13960 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 3 4 8 17 At2g14045 expressed protein 3 4 8 18 At2g17250 expressed protein weak similarity to Ribosome biogenesis protein MAK21 (Swiss-Prot:Q12176) [Saccharomyces cerevisiae] 3 4 8 19 At2g17300 expressed protein 3 4 8 20 At2g17510 ribonuclease II family protein similar to SP|P37202 Mitotic control protein dis3 {Schizosaccharomyces pombe}; contains Pfam profile PF00773: RNB-like protein 3 4 8 21 At2g17560 high mobility group protein gamma (HMGgamma) / HMG protein gamma nearly identical to HMG protein (HMGgamma) [Arabidopsis thaliana] GI:2832355 3 4 8 22 At2g17720 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 3 4 8 23 At2g17780 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 3 4 8 24 At2g17950 homeodomain transcription factor (WUSCHEL) 99.4% identical to WUSCHELL (GI:4090200) [Arabidopsis thaliana] 3 4 8 25 At2g17990 expressed protein 3 4 9 1 At2g20720 pentatricopeptide (PPR) repeat-containing protein contains Pfam TIGR00756: pentatricopeptide repeat domain 3 4 9 2 At2g20760 expressed protein 3 4 9 3 At2g20860 lipoic acid synthase (LIP1) identical to gi:3928758 contains Pfam profile PF04055: radical SAM domain protein 3 4 9 4 At2g20900 "diacylglycerol kinase, putative contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 3 4 9 5 At2g21070 expressed protein 3 4 9 6 At2g21130 "peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase identical to cyclophilin [Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34790" 3 4 9 7 At2g21250 "mannose 6-phosphate reductase (NADPH-dependent), putative 6-phosphate reductase [Apium graveolens][GI:1835701], NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Malus domestica][SP|P28475]" 3 4 9 8 At2g21300 kinesin motor family protein contains Pfam profile: kinesin motor domain PF00225 3 4 9 9 At2g24190 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 3 4 9 10 At2g24250 F-box family protein contains Pfam:PF00646 F-box domain 3 4 9 11 At2g24410 hypothetical protein 3 4 9 12 At2g24470 hypothetical protein 3 4 9 13 At2g24630 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 3 4 9 14 At2g24693 Expressed protein 3 4 9 15 At2g24880 "self-incompatibility protein-related low similarity to self-incompatibility from [Papaver nudicaule] GI:3097262, [Papaver rhoeas] GI:3097260" 3 4 9 16 At2g24940 cytochrome b5 domain-containing protein similar to SP|P70580 Membrane associated progesterone receptor component 1 {Rattus norvegicus}; contains Pfam profile PF00173: Heme/Steroid binding domain 3 4 9 17 At2g27650 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 4 9 18 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 3 4 9 19 At2g27820 prephenate dehydratase family protein 3 4 9 20 At2g27880 "argonaute protein, putative / AGO, putative similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}; contains Pfam profiles PF02170: PAZ domain, PF02171: Piwi domain" 3 4 9 21 At2g28060 "protein kinase-related similar to GAL83 protein [Solanum tuberosum] GI:5702015; contains Pfam profile PF04739: 5'-AMP-activated protein kinase, beta subunit, complex-interacting region; supporting cDNA gi|22652763|gb|AF491295.1|" 3 4 9 22 At2g28105 expressed protein 3 4 9 23 At2g28290 "chromatin remodeling protein, putative (SYD) similar to transcriptional activator HBRM [Homo sapiens] GI:414117; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; identical to cDNA putative chromatin remodeling protein SYD (SPLAYED) GI:13603720" 3 4 9 24 At2g28315 "transporter-related low similarity to SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP- GlcA/UDP-GalNAc transporter) {Homo sapiens}, SP|Q95YI5 UDP-sugar transporter UST74c (Fringe connection protein) {Drosophila melanogaster}" 3 4 9 25 At2g31050 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 3 4 10 1 At2g31085 Clavata3 / ESR-Related-6 (CLE6) CLAVATA3/ESR-Related 6 (CLE6) 3 4 10 2 At2g31250 "glutamyl-tRNA reductase, putative similar to HEMA2 [SP|P49294], HEMA1 [SP|P42804]" 3 4 10 3 At2g31305 expressed protein 3 4 10 4 At2g31450 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 3 4 10 5 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) identical to ARIADNE-like protein ARI7 [Arabidopsis thaliana] GI:29125028; contains similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster]; contains Pfam profile PF01485: IBR domain 3 4 10 6 At2g31680 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:289370 from [Brassica napus]" 3 4 10 7 At2g31730 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413" 3 4 10 8 At2g34310 expressed protein 3 4 10 9 At2g34350 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 3 4 10 10 At2g34470 urease accessory protein (UREG) identical to urease accessory protein UREG GI:4324678 from [Arabidopsis thaliana]; contains Pfam profile: PF01495 HypB/UreG nucleotide-binding domain 3 4 10 11 At2g34530 expressed protein 3 4 10 12 At2g34670 "proline-rich family protein contains proline-rich region, INTERPRO:IPR000694" 3 4 10 13 At2g34730 "myosin heavy chain-related low similarity to SP|P14105 Myosin heavy chain, nonmuscle (Cellular myosin heavy chain) {Gallus gallus}" 3 4 10 14 At2g34910 expressed protein 3 4 10 15 At2g34980 "phosphatidylinositolglycan synthase family protein similar to SP|Q92535 Phosphatidylinositol-glycan biosynthesis, class C protein (PIG-C) {Homo sapiens}" 3 4 10 16 At2g37560 origin recognition complex subunit 2 (ORC2) identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from [Arabidopsis thaliana] 3 4 10 17 At2g37590 Dof-type zinc finger domain-containing protein 3 4 10 18 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 3 4 10 19 At2g37800 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 10 20 At2g37970 SOUL heme-binding family protein weak similarity to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 3 4 10 21 At2g38020 "vacuoleless1 (VCL1) contains Pfam profiles: PF04841 Vps16, N-terminal region, PF04840: Vps16, C-terminal region; identical to cDNA VCL1 (VCL1) GI:13877132" 3 4 10 22 At2g38180 GDSL-motif lipase/hydrolase family protein similar to SP|P41734 Isoamyl acetate-hydrolyzing esterase (EC 3.1.-.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 3 4 10 23 At2g38220 expressed protein 3 4 10 24 At2g40770 "SNF2 domain-containing protein / helicase domain-containing protein / zinc finger (C3HC4 type RING finger) family protein low similarity to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 4 10 25 At2g40820 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 3 4 11 1 At2g40940 ethylene response sensor / ethylene-responsive sensor (ERS) identical to ethylene response sensor (ERS) [Arabidopsis thaliana] GI:1046225 3 4 11 2 At2g40990 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 3 4 11 3 At2g41150 expressed protein an isoform contains a GA donor splice site supported by FL-cDNA alignment which truncates the ORF. 3 4 11 4 At2g41210 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 3 4 11 5 At2g41390 expressed protein 3 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 3 4 11 7 At2g43990 expressed protein 3 4 11 8 At2g44050 "6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase identical to 6,7-dimethyl-8-ribityllumazine synthase, chloroplast [precursor] SP:O80575 from [Arabidopsis thaliana]" 3 4 11 9 At2g44180 "methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to SP|P50579 Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam profile PF00557: metallopeptidase family M24" 3 4 11 10 At2g44230 expressed protein 3 4 11 11 At2g44410 expressed protein 3 4 11 12 At2g44470 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 3 4 11 13 At2g44610 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:623586 from [Nicotiana tabacum] ; contains an ADP-ribosylation factors family signature for proteins involved in protein trafficking" 3 4 11 14 At2g44670 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 3 4 11 15 At2g47350 "PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam domains, PF04795: PAPA-1-like conserved region and PF04438: HIT zinc finger" 3 4 11 16 At2g47400 CP12 domain-containing protein contains Pfam profile: PF02672 CP12 domain 3 4 11 17 At2g47550 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 4 11 18 At2g47610 60S ribosomal protein L7A (RPL7aA) 3 4 11 19 At2g47780 rubber elongation factor (REF) protein-related similar to Small rubber particle protein (SRPP) (22 kDa rubber particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) (Swiss-Prot:O82803) [Hevea brasiliensis]; similar to Stress-related protein (Swiss-Prot:Q9SW70) [Vitis riparia] 3 4 11 20 At2g47830 "cation efflux family protein / metal tolerance protein, putative (MTPc1) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 3 4 11 21 At2g47960 expressed protein 3 4 11 22 At2g48000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 11 23 At3g03330 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 3 4 11 24 At3g03400 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 3 4 11 25 At3g03570 expressed protein similar to hypothetical protein GB:CAB38918 [Arabidopsis thaliana] 3 4 12 1 At3g03630 "cysteine synthase, chloroplast, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative identical to SP|O22682 Probable cysteine synthase, chloroplast precursor {Arabidopsis thaliana}, similar to SP|P31300 Cysteine synthase, chloroplast precursor {Capsicum annuum}" 3 4 12 2 At3g03780 "5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative very strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent" 3 4 12 3 At3g03840 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 3 4 12 4 At3g03970 expressed protein 3 4 12 5 At3g04010 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp], GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon esculentum]" 3 4 12 6 At3g06545 hypothetical protein 3 4 12 7 At3g06590 expressed protein 3 4 12 8 At3g06670 expressed protein 3 4 12 9 At3g06720 "importin alpha-1 subunit, putative (IMPA1) similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 3 4 12 10 At3g06910 "Ulp1 protease family protein similar to sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 4 12 11 At3g06960 expressed protein 3 4 12 12 At3g07120 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 3 4 12 13 At3g07180 "GPI transamidase component PIG-S-related similar to GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis, class S protein) (Swiss-Prot:Q96S52) [Homo sapiens]" 3 4 12 14 At3g10210 expressed protein similar to putative protein GB:CAA20045 [Arabidopsis thaliana] 3 4 12 15 At3g10260 reticulon family protein weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon; identical to cDNA GI:32331854 3 4 12 16 At3g10400 RNA recognition motif (RRM)-containing protein low similarity to splicing factor SC35 [Arabidopsis thaliana] GI:9843653; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 4 12 17 At3g10440 hypothetical protein 3 4 12 18 At3g10572 "3-phosphoinositide-dependent protein kinase-1, putative annotation temporarily based on supporting cDNA gi|17065215|gb|AY062684.1|" 3 4 12 19 At3g10610 40S ribosomal protein S17 (RPS17C) similar to 40S ribosomal protein S17 GB:AAD50774 [Lycopersicon esculentum] 3 4 12 20 At3g10750 hypothetical protein 3 4 12 21 At3g10790 F-box family protein contains F-box domain Pfam:PF00646 3 4 12 22 At3g13224 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 4 12 23 At3g13230 expressed protein 3 4 12 24 At3g13390 multi-copper oxidase type I family protein nearly identical to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Multicopper oxidase domain PF00394 3 4 12 25 At3g13440 expressed protein 3 4 13 1 At3g13590 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 3 4 13 2 At3g13650 disease resistance response protein-related/ dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 4 13 3 At3g13760 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 13 4 At3g13790 beta-fructosidase (BFRUCT1) / beta-fructofuranosidase / cell wall invertase identical to beta-fructofuranosidase GI:402740 from [Arabidopsis thaliana] 3 4 13 5 At3g16290 "FtsH protease, putative contains similarity to cell division protein FtsH GI:1652085 from [Synechocystis sp. PCC 6803] " 3 4 13 6 At3g16350 myb family transcription factor ; contains Pfam profile: PF00249 Myb-like DNA-binding domain 3 4 13 7 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 4 13 8 At3g16555 F-box family protein contains F-box domain Pfam:PF00646 3 4 13 9 At3g16720 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 4 13 10 At3g16760 tetratricopeptide repeat (TPR)-containing protein low similarity to TPR-containing protein involved in spermatogenesis TPIS [Mus musculus] GI:6272682; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain 3 4 13 11 At3g16910 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 7 AMPBP7 (AMPBP7) GI:20799722 3 4 13 12 At3g16970 "self-incompatibility protein-related similar to S1 self-incompatibility protein GB:CAA52380 [Papaver rhoeas] (Proc. Natl. Acad. Sci. U.S.A. 91 (6), 2265-2269 (1994))" 3 4 13 13 At3g19580 zinc finger (C2H2 type) protein 2 (AZF2) identical to Cys2/His2-type zinc finger protein 2 [Arabidopsis thaliana] gi|6009885|dbj|BAA85107 3 4 13 14 At3g19640 "magnesium transporter CorA-like family protein (MRS2-3) low similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 3 4 13 15 At3g19820 cell elongation protein / DWARF1 / DIMINUTO (DIM) identical to GB:S71189 [SP|Q39085] from [Arabidopsis thaliana]; contains Pfam FAD binding domain PF01565 3 4 13 16 At3g19880 F-box family protein contains Pfam profile: PF00646 F-box domain 3 4 13 17 At3g20040 "hexokinase, putative similar to hexokinase 1 [Spinacia oleracea] Swiss-Prot:Q9SEK3" 3 4 13 18 At3g20080 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 3 4 13 19 At3g20240 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier proteins 3 4 13 20 At3g20280 PHD finger family protein contains Pfam profile: PF00628 PHD-finger 3 4 13 21 At3g23010 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 3 4 13 22 At3g23050 auxin-responsive protein / indoleacetic acid-induced protein 7 (IAA7) identical to SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7) 3 4 13 23 At3g23210 basic helix-loop-helix (bHLH) family protein similar to hypothetical protein GB:CAB10220 from [Arabidopsis thaliana] 3 4 13 24 At3g23260 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 4 13 25 At3g23410 "alcohol oxidase-related similar to long chain fatty alcohol oxidase from Candida cloacae [GI:6983581], Candida tropicalis [GI:6983594]" 3 4 14 1 At3g23480 cyclopropane fatty acid synthase-related similar to cyclopropane synthase [Sterculia foetida] GI:21069167 3 4 14 2 At3g23670 "phragmoplast-associated kinesin-related protein, putative similar to kinesin like protein GB:CAB10194 from [Arabidopsis thaliana]" 3 4 14 3 At3g23720 hypothetical protein 3 4 14 4 At3g26540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 3 4 14 5 At3g26600 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 3 4 14 6 At3g26700 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 14 7 At3g26750 expressed protein 3 4 14 8 At3g26890 expressed protein 3 4 14 9 At3g26935 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 3 4 14 10 At3g27110 "peptidase M48 family protein contains Pfam domain, PF01435: Peptidase family M48" 3 4 14 11 At3g27170 "chloride channel protein (CLC-b) identical to CLC-b chloride channel protein GB:CAA96058 from [Arabidopsis thaliana] (J. Biol. Chem. 271 (52), 33632-33638 (1996))" 3 4 14 12 At3g30280 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], alcohol acyltransferase [Fragaria x ananassa][GI:10121328][PMID:10810141]" 3 4 14 13 At3g30350 expressed protein 3 4 14 14 At3g30550 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 3 4 14 15 At3g30640 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 4 14 16 At3g30816 hypothetical protein 3 4 14 17 At3g30845 hypothetical protein 3 4 14 18 At3g31940 hypothetical protein 3 4 14 19 At3g32030 terpene synthase/cyclase family protein contains Pfam profile: PF01397 terpene synthase family 3 4 14 20 At3g44800 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 3 4 14 21 At3g44850 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 4 14 22 At3g45020 50S ribosomal protein-related contains weak similarity to Swiss-Prot:P23407 cyanelle 50S ribosomal protein L18 [Cyanophora paradoxa] 3 4 14 23 At3g45070 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 3 4 14 24 At3g45230 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420" 3 4 14 25 At3g45310 "cysteine proteinase, putative similar to AALP protein GI:7230640 from [Arabidopsis thaliana] and barley aleurain" 3 4 15 1 At3g45490 hypothetical protein 3 4 15 2 At3g45555 "zinc finger (C3HC4-type RING finger) family protein low similarity to UbcM4-interacting protein 4 [Mus musculus] GI:13991706; contains Pfam profiles PF00097: Zinc finger C3HC4 type (RING finger), PF01485: IBR (In Between Ring fingers) domain" 3 4 15 3 At3g48360 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 3 4 15 4 At3g48425 endonuclease/exonuclease/phosphatase family protein similar to SP|P51173|APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)(Class II apurinic/apyrimidinic(AP)-endonuclease) {Dictyostelium discoideum}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 4 15 5 At3g48600 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 3 4 15 6 At3g48670 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 3 4 15 7 At3g48840 RNA recognition motif (RRM)-containing protein 3 4 15 8 At3g48880 "F-box family protein N7 protein - Medicago truncatula, EMBL:CAA76808 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250" 3 4 15 9 At3g49050 "lipase class 3 family protein / calmodulin-binding heat-shock protein, putative calmodulin-binding heat-shock protein, Nicotiana tabacum, PIR:T04107" 3 4 15 10 At3g49110 peroxidase 33 (PER33) (P33) (PRXCA) / neutral peroxidase C (PERC) identical to SP|P24101 Peroxidase 33 precursor (EC 1.11.1.7) (Atperox P33) (ATPCa) (Neutral peroxidase C) (PERC) {Arabidopsis thaliana} 3 4 15 11 At3g51950 "zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM), PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 4 15 12 At3g51990 "protein kinase family protein contains protein kinase domain, PF00069" 3 4 15 13 At3g52115 hypothetical protein 3 4 15 14 At3g52160 "beta-ketoacyl-CoA synthase family protein beta-ketoacyl-CoA synthase - Simmondsia chinensis,PID:g1045614" 3 4 15 15 At3g52320 F-box family protein contains F-box domain Pfam:PF00646 3 4 15 16 At3g52370 beta-Ig-H3 domain-containing protein / fasciclin domain-containing protein weak similarity to osteoblast specific factor 2 [Homo sapiens] GI:393319; contains Pfam profile PF02469: Fasciclin domain; supporting cDNA gi|26450295|dbj|AK117608.1| 3 4 15 17 At3g52540 ovate family protein 52% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 3 4 15 18 At3g52580 "40S ribosomal protein S14 (RPS14C) ribosomal protein S14 -Zea mays,PIR2:A30097" 3 4 15 19 At3g55110 "ABC transporter family protein ATP-binding cassette-sub-family G-member 2, Mus musculus, EMBL:AF140218" 3 4 15 20 At3g55150 "exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; tomato leucine zipper-containing protein, Lycopersicon esculentum, PIR:S21495" 3 4 15 21 At3g55350 expressed protein 3 4 15 22 At3g55390 "integral membrane family protein MtN24, Medicago truncatula, EMBL:MTY15290; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588)" 3 4 15 23 At3g55580 "regulator of chromosome condensation (RCC1) family protein UVB-resistance protein UVR8, Arabidopsis thaliana, EMBL:AF130441; contains Pfam PF00415: Regulator of chromosome condensation (RCC1) domain" 3 4 15 24 At3g55630 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS4) nearly identical to folylpolyglutamate-dihydrofolate synthetase [Arabidopsis thaliana] GI:17976761 3 4 15 25 At3g55790 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 3 4 16 1 At3g55850 amidohydrolase family protein weak similarity to SP|Q06555 Exoenzymes regulatory protein aepA precursor {Erwinia carotovora}; contains Pfam profile PF01979: Amidohydrolase family 3 4 16 2 At3g58710 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 3 4 16 3 At3g58770 expressed protein ; expression supported by MPSS 3 4 16 4 At3g58950 F-box family protein contains F-box domain Pfam:PF00646 3 4 16 5 At3g59010 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 4 16 6 At3g59160 F-box family protein contains F-box domain Pfam:PF00646 3 4 16 7 At3g59220 "pirin, putative similar to SP|O00625 Pirin {Homo sapiens}; contains Pfam profile PF02678: Pirin" 3 4 16 8 At3g59360 nucleotide-sugar transporter family protein low similarity to SP|P78382 CMP-sialic acid transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 3 4 16 9 At3g59400 expressed protein 3 4 16 10 At3g62090 "basic helix-loop-helix (bHLH) protein, putative very strong similarity to PIF3 like basic Helix Loop Helix protein 2 (PIL2) [Arabidopsis thaliana] GI:22535494" 3 4 16 11 At3g62150 "multidrug resistant (MDR) ABC transporter, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 3 4 16 12 At3g62330 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 3 4 16 13 At3g62390 expressed protein several hypothetical proteins - Arabidopsis thaliana 3 4 16 14 At3g62560 "GTP-binding protein, putative similar to GTP-binding protein SAR1A (SP:O04834) [Arabidopsis thaliana]; small GTP-binding protein Bsar1a - Brassica campestris, EMBL:U55035" 3 4 16 15 At3g62620 sucrose-phosphatase-related contains weak similarity to sucrose-phosphatase [Arabidopsis thaliana] gi|11127757|gb|AAG31075 3 4 16 16 At3g62770 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); putative proteins - different species 3 4 16 17 At3g62820 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Arabidopsis thaliana SP|Q43867, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 3 4 16 18 At4g01690 protoporphyrinogen oxidase (PPOX) identical to SP|P55826 3 4 16 19 At4g01735 expressed protein ; expression supported by MPSS 3 4 16 20 At4g01897 expressed protein 3 4 16 21 At4g01925 DC1 domain-containing protein low similarity to UV-B light insensitive ULI3 [Arabidopsis thaliana] GI:17225050; contains Pfam profile PF03107: DC1 domain 3 4 16 22 At4g02070 DNA mismatch repair protein MSH6-1 (MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis thaliana} 3 4 16 23 At4g02120 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 3 4 16 24 At4g02260 "RelA/SpoT protein, putative (RSH1) identical to RSH1 (RelA/SpoT homolog) [Arabidopsis thaliana] GI:7141304; contains Pfam profiles PF02824: TGS domain, PF01966: HD domain, PF04607: Region found in RelA / SpoT proteins" 3 4 16 25 At4g02320 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 4 17 1 At4g05260 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 4 17 2 At4g05310 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 4 17 3 At4g05497 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 1 (GI:10716947) [Arabidopsis thaliana]; similar to F-box protein FBX13 (GI:6456110) [Mus musculus] 3 4 17 4 At4g05560 hypothetical protein 3 4 17 5 At4g06599 ubiquitin family protein contains Pfam domian PF00240: Ubiquitin family 3 4 17 6 At4g06724 hypothetical protein 3 4 17 7 At4g07460 hypothetical protein 3 4 17 8 At4g07510 hypothetical protein 3 4 17 9 At4g10670 transcription elongation factor-related low similarity to chromatin-specific transcription elongation factor FACT 140 kDa subunit [Homo sapiens] GI:5499741 3 4 17 10 At4g10730 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 17 11 At4g10890 expressed protein 3 4 17 12 At4g10925 F-box family protein contains Pfam PF00646: F-box domain 3 4 17 13 At4g11070 "WRKY family transcription factor other putative proteins, Arabidopsis thaliana" 3 4 17 14 At4g11130 "RNA-dependent RNA polymerase, putative similar to RNA-directed RNA polymerase [Lycopersicon esculentum] gi|4038592|emb|CAA71421" 3 4 17 15 At4g11290 "peroxidase, putative identical to peroxidase ATP19a [Arabidopsis thaliana] gi|1546692|emb|CAA67337" 3 4 17 16 At4g11350 fringe-related protein various hypothetical proteins from Arabidopsis thaliana strong similarity to unknown protein (pir||T13026) similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 3 4 17 17 At4g14080 "glycosyl hydrolase family 17 protein / anther-specific protein (A6) identical to probable glucan endo-1,3-beta-glucosidase A6 precursor SP:Q06915 from [Arabidopsis thaliana]" 3 4 17 18 At4g14120 expressed protein 3 4 17 19 At4g14230 CBS domain-containing protein-related contains Pfam profile PF01595: Domain of unknown function 3 4 17 20 At4g14290 expressed protein contains Interpro entry IPR000379 3 4 17 21 At4g14385 expressed protein 3 4 17 22 At4g14440 "enoyl-CoA hydratase/isomerase family protein low similarity to PhaB [Pseudomonas putida] GI:3253198, SP|P31551 Carnitine racemase {Escherichia coli}; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 3 4 17 23 At4g14600 expressed protein 3 4 17 24 At4g14650 expressed protein 3 4 17 25 At4g17010 expressed protein 3 4 18 1 At4g17050 expressed protein 3 4 18 2 At4g17215 expressed protein 3 4 18 3 At4g17260 "L-lactate dehydrogenase, putative strong similarity to L-lactate dehydrogenase from Lycopersicon esculentum (GI:1620970, GI:1620972), Hordeum vulgare (SP|P22988, SP|P22989); contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 3 4 18 4 At4g17480 palmitoyl protein thioesterase family protein 3 4 18 5 At4g17510 "ubiquitin carboxyl-terminal hydrolase, putative / ubiquitin thiolesterase, putative similar to SP|Q9JKB1 Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC 3.4.19.12) (UCH- L3) (Ubiquitin thiolesterase L3) {Mus musculus}; contains Pfam profile PF01088: Ubiquitin carboxyl-terminal hydrolase, family 1" 3 4 18 6 At4g17650 aromatic-rich family protein contains Pfam PF03654: Aromatic-Rich Protein Family 3 4 18 7 At4g17700 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 3 4 18 8 At4g20300 expressed protein 3 4 18 9 At4g20360 "elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana]" 3 4 18 10 At4g20520 hypothetical protein 3 4 18 11 At4g20700 hypothetical protein 3 4 18 12 At4g20870 "fatty acid hydroxylase, putative similar to fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147 from [Arabidopsis thaliana]" 3 4 18 13 At4g20930 "3-hydroxyisobutyrate dehydrogenase, putative similar to SP|P29266 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor (EC 1.1.1.31) {Rattus norvegicus}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase" 3 4 18 14 At4g21105 expressed protein 3 4 18 15 At4g21160 zinc finger and C2 domain protein (ZAC) identical to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 3 4 18 16 At4g23740 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase - Arabidopsis thaliana RKL1, PID:g4008006" 3 4 18 17 At4g23790 expressed protein many other Arabidopsis putative proteins 3 4 18 18 At4g23930 "expressed protein hin1 protein homolog, Oryza sativa, PIR:T02662" 3 4 18 19 At4g23990 "cellulose synthase family protein similar to cellulose synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882]" 3 4 18 20 At4g24160 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 4 18 21 At4g24200 "expressed protein hypothetical protein - Arabidopsis thaliana,PIR2:T06677" 3 4 18 22 At4g24320 hypothetical protein 3 4 18 23 At4g24390 F-box family protein (FBX14) similar to transport inhibitor response 1 protein GI:8777429 from [Arabidopsis thaliana] 3 4 18 24 At4g26950 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 3 4 18 25 At4g27000 "RNA-binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g1899188" 3 4 19 1 At4g27160 2S seed storage protein 3 / 2S albumin storage protein / NWMU2-2S albumin 3 identical to SP|P15459 3 4 19 2 At4g27240 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 3 4 19 3 At4g27410 "no apical meristem (NAM) family protein (RD26) contains Pfam PF02365: No apical meristem (NAM) domain; Arabidopsis thaliana nap gene,PID:e1234813; identical to cDNA RD26 mRNA for NAM-like protein GI:15375403" 3 4 19 4 At4g27460 CBS domain-containing protein 3 4 19 5 At4g27610 expressed protein 3 4 19 6 At4g27630 expressed protein 3 4 19 7 At4g30240 "expressed protein predicted protein, Arabidopsis thaliana" 3 4 19 8 At4g30300 "ABC transporter family protein ribonuclease L inhibitor - Mus musculus,PIR2:JC6555" 3 4 19 9 At4g30460 glycine-rich protein 3 4 19 10 At4g30500 expressed protein contains Pfam PF05620: Protein of unknown function (DUF788) 3 4 19 11 At4g30660 "hydrophobic protein, putative / low temperature and salt responsive protein, putative similar to SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana}; contains Pfam profile PF01679: Uncharacterized protein family" 3 4 19 12 At4g30710 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 3 4 19 13 At4g30840 WD-40 repeat protein family 3 4 19 14 At4g30890 "ubiquitin-specific protease 24, putative (UBP24) identical to ubiquitin-specific protease 24 [Arabidopsis thaliana] GI:11993488" 3 4 19 15 At4g33420 "peroxidase, putative identical to class III peroxidase ATP32 [Arabidopsis thaliana] gi|17530547|gb|AAL40837; identical to cDNA class III peroxidase ATP32 GI:17530546" 3 4 19 16 At4g33480 expressed protein 3 4 19 17 At4g33625 expressed protein 3 4 19 18 At4g33666 expressed protein 3 4 19 19 At4g33840 "glycosyl hydrolase family 10 protein xylan endohydrolase isoenzyme X-I, Hordeum vulgare,PID:g1813595" 3 4 19 20 At4g33890 expressed protein 3 4 19 21 At4g34020 "DJ-1 family protein similar to CAP1 [Rattus norvegicus] GI:3250916, ThiJ protein, Escherichia coli, PIR:H64771; contains Pfam profile PF01965 ThiJ/PfpI family" 3 4 19 22 At4g34060 expressed protein similar to DEMETER protein [Arabidopsis thaliana] GI:21743571; expression supported by MPSS 3 4 19 23 AT5G57480 PC-1 D10 3 4 19 24 3XSSC PC-1 D22 3 4 19 25 AT1G29930 PC-1 H10 3 4 20 1 3XSSC PC-1 H22 3 4 20 2 AT3G44150 PC-1 L10 3 4 20 3 3XSSC PC-1 L22 3 4 20 4 AT4G00810 PC-1 P10 3 4 20 5 3XSSC PC-1 P22 3 4 20 6 At4g36630 expressed protein 3 4 20 7 At4g36670 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 3 4 20 8 At4g36810 "geranylgeranyl pyrophosphate synthase (GGPS1) / GGPP synthetase / farnesyltranstransferase identical to GI:413730 to geranylgeranyl pyrophosphate synthase, chloroplast precursor GB:P34802 from [Arabidopsis thaliana] synonymous with farnesyltranstransferase" 3 4 20 9 At4g36860 "LIM domain-containing protein low similarity to LIM-domain protein [Branchiostoma floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens] GI:7209525; contains Pfam profile PF00412: LIM domain" 3 4 20 10 At4g37040 metallopeptidase M24 family protein similar to SP|O33343 Methionine aminopeptidase (EC 3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis}; contains Pfam profile PF00557: metallopeptidase family M24 3 4 20 11 At4g37100 hypothetical protein 3 4 20 12 At4g37260 myb family transcription factor (MYB73) contains Pfam profile: PF00249 myb-like DNA-binding domain 3 4 20 13 At4g37310 "cytochrome P450, putative " 3 4 20 14 At4g39910 ubiquitin-specific protease 3 (UBP3) identical to GI:2347098 3 4 20 15 At4g39955 "hydrolase, alpha/beta fold family protein low similarity to SP|P24640|LIP3_MORSP Lipase 3 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Moraxella sp}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 4 20 16 At4g32730 myb family transcription factor identical to PC-MYB1 GI:5678826 from [Arabidopsis thaliana]; 3 4 20 17 At5g01040 "laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773" 3 4 20 18 At5g01210 transferase family protein contains Pfam profile PF02458 transferase family 3 4 20 19 At5g01240 "amino acid permease, putative strong similarity to AUX1 GI:1531758 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 3 4 20 20 At5g01400 expressed protein contains low similarity to symplekin SP:Q92797 from [Homo sapiens] 3 4 20 21 At5g01460 LMBR1 integral membrane family protein contains Pfam PF04791: LMBR1-like conserved region 3 4 20 22 At5g04160 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 3 4 20 23 At5g04220 C2 domain-containing protein (sytC) GC donor splice site at exon 3; similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 3 4 20 24 At5g04400 no apical meristem (NAM) family protein ontains Pfam PF02365: No apical meristem (NAM) protein 3 4 20 25 At5g04440 expressed protein 3 4 21 1 At5g04640 "MADS-box family protein SLM3 MADS-box protein, S.latifolia, EMBL:SLSLM3" 3 4 21 2 At5g04700 hypothetical protein 3 4 21 3 At5g04840 bZIP protein 3 4 21 4 At5g04895 "helicase domain-containing protein similar to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579;contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, PF00035: Double-stranded RNA binding motif" 3 4 21 5 At5g07450 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 4 21 6 At5g07500 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 4 21 7 At5g07680 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 3 4 21 8 At5g07730 expressed protein 3 4 21 9 At5g07930 "RNA recognition motif (RRM)-containing protein similar to terminal ear1 [Zea mays] GI:3153237, SP|P08965 Meiosis protein mei2 {Schizosaccharomyces pombe}; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 3 4 21 10 At5g07990 "flavonoid 3'-monooxygenase / flavonoid 3'-hydroxylase (F3'H) / cytochrome P450 75B1 (CYP75B1) / transparent testa 7 protein (TT7) identical to SP|Q9SD85 Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1) (TRANSPARENT TESTA 7 protein) {Arabidopsis thaliana}; similar to gi:10334806, gi:10334808" 3 4 21 11 At5g08150 "hypothetical protein hypothetical protein F14K14.2 - Arabidopsis thaliana, EMBL:AC011914" 3 4 21 12 At5g08185 expressed protein 3 4 21 13 At5g11230 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 3 4 21 14 At5g11290 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 3 4 21 15 At5g11460 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 4 21 16 At5g11520 "aspartate aminotransferase, chloroplast / transaminase A (ASP3) (YLS4) identical to SP|P46644 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}; identical to cDNA YLS4 mRNA for aspartate aminotransferase (ASP3), partial cds GI:13122285" 3 4 21 17 At5g11680 "expressed protein predicted proteins, Arabidopsis thaliana" 3 4 21 18 At5g11740 arabinogalactan-protein (AGP15) identical to gi|10880507|gb|AAG24283 3 4 21 19 At5g11920 glycosyl hydrolase family 32 protein similar to fructan 1-exohydrolase IIa GI:13940209 from [Cichorium intybus]; contains Pfam profile PF00251: Glycosyl hydrolases family 32 3 4 21 20 At5g11980 conserved oligomeric Golgi complex component-related / COG complex component-related similar to SP|Q96MW5 Conserved oligomeric Golgi complex component 8 {Homo sapiens}; contains Pfam profile PF04124: Dor1-like family 3 4 21 21 At5g15120 expressed protein 3 4 21 22 At5g15180 "peroxidase, putative similar to peroxidase ATP12a [Arabidopsis thaliana] gi|1429217|emb|CAA67311" 3 4 21 23 At5g15330 SPX (SYG1/Pho81/XPR1) domain-containing protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profile PF03105: SPX domain 3 4 21 24 At5g15400 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 3 4 21 25 At5g15550 "transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak);" 3 4 22 1 At5g15610 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 3 4 22 2 At5g15760 "plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative similar to SP|P82412 Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) {Spinacia oleracea}; contains Pfam profile PF04839: Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)" 3 4 22 3 At5g15800 developmental protein SEPALLATA1 / floral homeotic protein (AGL2) (SEP1) identical to developmental protein SEPALLATA1 / floral homeotic protein (AGL2 / SEP1) SP:P29382 from [Arabidopsis thaliana] 3 4 22 4 At5g18440 hypothetical protein 3 4 22 5 At5g18490 expressed protein 3 4 22 6 At5g18630 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 3 4 22 7 At5g18670 "beta-amylase, putative (BMY3) / 1,4-alpha-D-glucan maltohydrolase, putative almost identical to beta-amylase BMY3 GI:15149457 from [Arabidopsis thaliana]; identical to cDNA putative beta-amylase BMY3 (BMY3) GI:15149456" 3 4 22 8 At5g18830 squamosa promoter-binding protein-like 7 (SPL7) identical to squamosa promoter binding protein-like 7 [Arabidopsis thaliana] GI:5931635; contains Pfam profile PF03110: SBP domain 3 4 22 9 At5g18880 expressed protein ; expression supported by MPSS 3 4 22 10 At5g19030 "RNA recognition motif (RRM)-containing protein low similarity to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis} SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 3 4 22 11 At5g19070 expressed protein 3 4 22 12 At5g22420 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 3 4 22 13 At5g22480 "zinc finger (ZPR1-type) family protein contains Pfam doamin, PF03367: ZPR1 zinc-finger domain" 3 4 22 14 At5g22630 prephenate dehydratase family protein contains Pfam profile PF00800: prephenate dehydratase 3 4 22 15 At5g22670 F-box family protein contains F-box domain Pfam:PF00646 3 4 22 16 At5g22840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 22 17 At5g22880 "histone H2B, putative strong similarity to histone H2B-3 Lycopersicon esculentum GI:3021485, H2B Gossypium hirsutum SP|O22582; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 3 4 22 18 At5g23060 expressed protein 3 4 22 19 At5g23090 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) identical to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 3 4 22 20 At5g25770 expressed protein 3 4 22 21 At5g25820 exostosin family protein contains Pfam profile: PF03016 exostosin family 3 4 22 22 At5g25990 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266; expression supported by MPSS" 3 4 22 23 At5g26040 histone deacetylase family protein (HDA2) identical to HDA2 [Arabidopsis thaliana] GI:21105771; similar to SP|Q96DB2 Histone deacetylase 11 (HD11) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 3 4 22 24 At5g26190 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 22 25 At5g26250 "sugar transporter, putative similar to hexose transporter [Lycopersicon esculentum] GI:5734440, sugar carrier protein {Ricinus communis} SP|Q41144, monosaccharide transporter [Nicotiana tabacum] GI:19885; contains Pfam profile PF00083: major facilitator superfamily protein" 3 4 23 1 At5g26692 hypothetical protein 3 4 23 2 At5g26730 expressed protein ; expression supported by MPSS 3 4 23 3 At5g33240 hypothetical protein 3 4 23 4 At5g33330 RNase H domain-containing protein contains Pfam profile PF00075: RNase H 3 4 23 5 At5g34581 hydroxyproline-rich glycoprotein family protein 3 4 23 6 At5g34855 hypothetical protein 3 4 23 7 At5g35010 "hypothetical protein similar to At3g24380, At5g36840, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 3 4 23 8 At5g35090 expressed protein 3 4 23 9 At5g35290 hypothetical protein 3 4 23 10 At5g35338 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429:Methyl-CpG binding domain 3 4 23 11 At5g38480 "14-3-3 protein GF14 psi (GRF3) (RCI1) identical to 14-3-3 protein GF14 psi GI:1168200, SP:P42644" 3 4 23 12 At5g38540 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 3 4 23 13 At5g38700 expressed protein 3 4 23 14 At5g38760 "expressed protein similar to ABA-inducible protein [Fagus sylvatica] GI:3901016, cold-induced protein kin1 [Brassica napus] GI:167146" 3 4 23 15 At5g38940 "germin-like protein, putative similar to germin-like portein GLP9 [SP|Q9LEA7]; contains PS00725 Germin family signature" 3 4 23 16 At5g38980 expressed protein 3 4 23 17 At5g39180 "germin-like protein, putative similar to germin-like protein (GLP6) - Arabidopsis thaliana, EMBL:U75194 [SP|P92997]" 3 4 23 18 At5g39230 transcription initiation factor-related contains weak similarity to Transcription initiation factor IIB (General transcription factor TFIIB) (Swiss-Prot:Q8W0W3) [Oryza sativa] 3 4 23 19 At5g42070 expressed protein similar to unknown protein (dbj|BAA92898.1) 3 4 23 20 At5g42100 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]" 3 4 23 21 At5g42270 "FtsH protease, putative similar to FtsH protease GI:13183728 from [Medicago sativa]" 3 4 23 22 At5g42325 transcription elongation factor-related contains weak similarity to transcription elongation factors 3 4 23 23 At5g42500 disease resistance-responsive family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 3 4 23 24 At5g42570 expressed protein low similarity to SP|P51572 B-cell receptor-associated protein 31 (6C6-AG tumor-associated antigen) (DXS1357E) {Homo sapiens} 3 4 23 25 At5g42740 "glucose-6-phosphate isomerase, cytosolic (PGIC) identical to SP|P34795 Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) {Arabidopsis thaliana}; contains Pfam profile PF00342: glucose-6-phosphate isomerase" 3 4 24 1 At5g42785 hypothetical protein 3 4 24 2 At5g45330 expressed protein ; expression supported by MPSS 3 4 24 3 At5g45370 nodulin-related / integral membrane family protein contains Pfam profile:PF00892 integral membrane protein DUF6 3 4 24 4 At5g45530 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 3 4 24 5 At5g45580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 4 24 6 At5g45730 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 24 7 At5g45770 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 3 4 24 8 At5g45930 "magnesium-chelatase subunit chlI, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative similar to SP|P161127 from Arabidopsis thaliana, SP|P93162 from Glycine max, SP|O22436 from Nicotiana tabacum; non-consensus AA donor splice site at exon 1, TG acceptor splice site at exon 2" 3 4 24 9 At5g45990 "crooked neck protein, putative / cell cycle protein, putative similar to Swiss-Prot:P17886 crooked neck protein [Drosophila melanogaster]" 3 4 24 10 At5g48560 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 4 24 11 At5g48610 expressed protein ; expression supported by MPSS 3 4 24 12 At5g48740 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 3 4 24 13 At5g48800 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 3 4 24 14 At5g48960 5' nucleotidase family protein low similarity to SP|P49902 Cytosolic purine 5'-nucleotidase (EC 3.1.3.5) (5'-nucleotidase cytosolic II) {Homo sapiens}; contains Pfam profile PF05761: 5' nucleotidase family 3 4 24 15 At5g49015 Expressed protein 3 4 24 16 At5g49190 sucrose synthase / sucrose-UDP glucosyltransferase (SUS2) nearly identical to SP|Q00917 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS2); contains Pfam profile: PF00862 sucrose synthase 3 4 24 17 At5g49230 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 3 4 24 18 At5g51950 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 3 4 24 19 At5g52010 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 3 4 24 20 At5g52170 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 3 4 24 21 At5g52220 expressed protein ; expression supported by MPSS 3 4 24 22 At5g52400 cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) (cytochrome P450 lii hydroxylase) (ge10h) [Catharanthus roseus] 3 4 24 23 At5g52460 F-box family protein contains F-box domain Pfam:PF00646 3 4 24 24 At5g52620 F-box family protein contains Pfam profile: PF00646 F-box domain 3 4 24 25 At5g52660 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA-binding domain 3 4 25 1 At5g55340 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein contains similarity to wax synthase similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 3 4 25 2 At5g55400 "fimbrin-like protein, putative similar to fimbrin-like protein (ATFIM1) [Arabidopsis thaliana] GI:2905893; contains Pfam profile PF00307: Calponin homology (CH) domain" 3 4 25 3 At5g55565 expressed protein 3 4 25 4 At5g55610 expressed protein 3 4 25 5 At5g55770 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 25 6 At5g55830 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 3 4 25 7 At5g55990 calcineurin B-like protein 2 (CBL2) identical to calcineurin B-like protein 2 GI:3309084 from [Arabidopsis thaliana] 3 4 25 8 At5g56050 hypothetical protein 3 4 25 9 At5g58630 expressed protein 3 4 25 10 At5g58690 phosphoinositide-specific phospholipase C family protein contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 3 4 25 11 At5g58850 myb family transcription factor (MYB119) contains Pfam profile: PF00249 myb-like DNA binding domain 3 4 25 12 At5g58910 "laccase, putative / diphenol oxidase, putative similar to diphenol oxidase [Nicotiana tabacum][GI:1685087]" 3 4 25 13 At5g59050 expressed protein 3 4 25 14 At5g59105 expressed protein 3 4 25 15 At5g59260 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 3 4 25 16 At5g59310 lipid transfer protein 4 (LTP4) identical to lipid transfer protein 4 from Arabidopsis thaliana [gi:8571923]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 4 25 17 At5g61940 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 4 25 18 At5g62000 "transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393" 3 4 25 19 At5g62165 MADS-box protein (AGL42) 3 4 25 20 At5g62210 embryo-specific protein-related contains weak similarity to embryo-specific protein 3 (GI:3335171) [Arabidopsis thaliana] 3 4 25 21 At5g62390 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 3 4 25 22 At5g62460 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 4 25 23 At5g62580 expressed protein 3 4 25 24 At5g62650 expressed protein 3 4 25 25 At5g65205 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 3 4 26 1 At5g65230 myb family transcription factor (MYB53) contains PFAM profile: myb DNA binding domain PF00249 3 4 26 2 At5g65410 zinc finger homeobox family protein / ZF-HD homeobox family protein similar to hypothetical proteins (GP|4220524)(GP|3184285|)(Arabidopsis); ZP-HD homeobox family protein GP|13374061 (Flaveria bidentis);GP:5091602 {Oryza sativa} 3 4 26 3 At5g65450 "ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to ubiquitin-specific protease 16 (UBP16) [Arabidopsis thaliana] GI:11993477; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF01753: MYND finger" 3 4 26 4 At5g65620 peptidase M3 family protein / thimet oligopeptidase family protein similar to SP|P27237 Oligopeptidase A (EC 3.4.24.70) {Salmonella typhimurium}; contains Pfam profile PF01432: Peptidase family M3 3 4 26 5 At5g65670 auxin-responsive protein / indoleacetic acid-induced protein 9 (IAA9) identical to SP|Q38827 Auxin-responsive protein IAA9 (Indoleacetic acid-induced protein 9) {Arabidopsis thaliana} 3 4 26 6 At5g65830 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to receptor protein kinase-like protein" 3 4 26 7 At5g65890 ACT domain-containing protein (ACR1) contains Pfam profile ACT domain PF01842 3 4 26 8 ath-MIR158a miRNA gene Arabidopsis thaliana miR158a stem-loop 3 4 26 9 ath-MIR172a miRNA gene Arabidopsis thaliana miR172a stem-loop 3 4 26 10 ath-MIR393b miRNA gene Arabidopsis thaliana miR393b stem-loop 3 4 26 11 3xSSC 3xSSC 3 4 26 12 3xSSC 3xSSC 3 4 26 13 3xSSC 3xSSC 3 4 26 14 3xSSC 3xSSC 3 4 26 15 3xSSC 3xSSC 3 4 26 16 At3g44800 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 3 4 26 17 At3g44850 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 4 26 18 At3g45020 50S ribosomal protein-related contains weak similarity to Swiss-Prot:P23407 cyanelle 50S ribosomal protein L18 [Cyanophora paradoxa] 3 4 26 19 At3g45070 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 3 4 26 20 At3g45230 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420" 3 4 26 21 At3g45310 "cysteine proteinase, putative similar to AALP protein GI:7230640 from [Arabidopsis thaliana] and barley aleurain" 3 4 26 22 At3g45490 hypothetical protein 3 4 26 23 At3g45555 "zinc finger (C3HC4-type RING finger) family protein low similarity to UbcM4-interacting protein 4 [Mus musculus] GI:13991706; contains Pfam profiles PF00097: Zinc finger C3HC4 type (RING finger), PF01485: IBR (In Between Ring fingers) domain" 3 4 26 24 Blank Blank 3 4 26 25 Blank Blank 4 1 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 4 1 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 4 1 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 4 1 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 4 1 1 5 atc06 Randomly generated negative control 4 1 1 6 atc12 Randomly generated negative control 4 1 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 4 1 1 8 atc02 Randomly generated negative control 4 1 1 9 At1g01040 DEAD/DEAH box helicase carpel factory / CAF identical to RNA helicase/RNAseIII CAF protein GB:AAF03534 GI:6102610 from [Arabidopsis thaliana] 4 1 1 10 At1g01090 "pyruvate dehydrogenase E1 component alpha subunit, chloroplast identical to pyruvate dehydrogenase E1 alpha subunit GB:AAB86803 GI:2454182 from [Arabidopsis thaliana]; identical to cDNA pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein GI:2454181" 4 1 1 11 At1g01225 NC domain-containing protein-related contains weak hit to Pfam profile PF04970: NC domain 4 1 1 12 At1g01290 molybdopterin biosynthesis CNX3 protein / molybdenum cofactor biosynthesis enzyme CNX3 (CNX3) identical to molybdopterin biosynthesis CNX3 protein SP|Q39056 from [Arabidopsis thaliana] 4 1 1 13 At1g01480 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 [GI:166578] from [Arabidopsis thaliana] 4 1 1 14 At1g01530 MADS-box protein (AGL28) similar to MADS-box transcription factor GI:6580943 from [Picea abies]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 4 1 1 15 At1g01700 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 4 1 1 16 At1g01750 "actin-depolymerizing factor, putative strong similarity to SP|P30175 Actin-depolymerizing factor (ADF) {Lilium longiflorum}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 4 1 1 17 At1g04340 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]" 4 1 1 18 At1g04400 cryptochrome 2 apoprotein (CRY2) / blue light photoreceptor (PHH1) 97% identical to photolysase (PHH1) (SP:Q96524) and cryptochrome 2 apoprotein (CRY2) (SP:U43397). ESTs gb|W43661 and gb|Z25638 come from this gene; contains Pfam profiles PF03441: FAD binding domain of DNA photolyase and PF00875: deoxyribodipyrimidine photolyase; identical to cDNA Cvi cryptochrome 2 (CRY2) GI:18026275 4 1 1 19 At1g04560 "AWPM-19-like membrane family protein contains Pfam PF05512: AWPM-19-like family; similar to late embryogenesis abundant protein, (Lea) with hydrophobic domain, high pI value (11.6); 15kD protein; putative (GI:310570) {Glycine max}" 4 1 1 20 At1g04600 "myosin, putative similar to myosin (GI:499047) [Arabidopsis thaliana]" 4 1 1 21 At1g04780 ankyrin repeat family protein contains Pfam PF00023: Ankyrin repeat 4 1 1 22 At1g04840 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 1 1 23 At1g04980 thioredoxin family protein similar to SP|Q63081 Protein disulfide isomerase A6 precursor (EC 5.3.4.1) {Rattus norvegicus}; contains Pfam profile PF00085: Thioredoxin 4 1 1 24 At1g05030 "hexose transporter, putative similar to hexose transporters from Nicotiana tabacum (GI:8347244), Solanum tuberosum (GI:8347246), Arabidopsis thaliana (GI:8347250); contains Pfam profile PF00083: major facilitator superfamily protein" 4 1 1 25 At1g07640 Dof-type zinc finger domain-containing protein identical to zinc finger protein OBP2 GI:5059394 from [Arabidopsis thaliana] 4 1 2 1 At1g07690 hypothetical protein 4 1 2 2 At1g07790 "histone H2B, putative strong similarity to histone H2B Arabidopsis thaliana GI:2407802, Gossypium hirsutum SP|O22582, Lycopersicon esculentum GI:3021489, Capsicum annuum SP|O49118; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 4 1 2 3 At1g07830 ribosomal protein L29 family protein similar to GB:CAA83057 from [Saccharomyces cerevisiae] 4 1 2 4 At1g07960 thioredoxin family protein low similarity to protein disulfide isomerase 4 [Giardia intestinalis] GI:13489047; contains Pfam profile PF00085: Thioredoxin 4 1 2 5 At1g08000 zinc finger (GATA type) family protein similar to PIR:T05288 from [Arabidopsis thaliana] 4 1 2 6 At1g08125 Expressed protein 4 1 2 7 At1g08170 "histone H2B family protein similar to histone H2B from Chlamydomonas reinhardtii [SP|P54347, SP|P54346, SP|P50565], Volvox carteri [SP|P16867, SP|P16868]; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 4 1 2 8 At1g10750 expressed protein similar to gi 3128199 F4I1.5 putative proteinase from Arabidopsis thaliana BAC gb AC004521 4 1 2 9 At1g10810 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 4 1 2 10 At1g10970 "metal transporter, putative (ZIP4) similar to Zn and Cd transporter ZNT1 [Thlaspi caerulescens] gi|7381054|gb|AAF61374; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 4 1 2 11 At1g11020 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 1 2 12 At1g11200 expressed protein contains Pfam profile PF03619: Domain of unknown function 4 1 2 13 At1g11260 glucose transporter (STP1) nearly identical to glucose transporter GB:P23586 SP|P23586 from [Arabidopsis thaliana] 4 1 2 14 At1g11400 expressed protein 4 1 2 15 At1g11450 nodulin MtN21 family protein similar to GI:2598575 MtN21 (GI:2598575) {Medicago truncatula} 4 1 2 16 At1g14230 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to SP|P49961 Ectonucleoside triphosphate diphosphohydrolase 1 (EC 3.6.1.5) (Ecto-apyrase) {Homo sapiens}; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 4 1 2 17 At1g14270 CAAX amino terminal protease family protein contains Pfam profile PF02517: CAAX amino terminal protease family 4 1 2 18 At1g14420 pectate lyase family protein similar to pectate lyase P59 SP:P15722 from [Lycopersicon esculentum] 4 1 2 19 At1g14480 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 4 1 2 20 At1g14650 "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein similar to SP|Q15459 Splicing factor 3 subunit 1 (Spliceosome associated protein 114) {Homo sapiens}; contains Pfam profiles PF00240: Ubiquitin family, PF01805: Surp module" 4 1 2 21 At1g14686 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis]; contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; 4 1 2 22 At1g14820 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 [Saccharomyces cerevisiae (Baker's yeast)] 4 1 2 23 At1g14860 "MutT/nudix family protein low similarity to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 4 1 2 24 At1g17545 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase 2C GI:3242077 from (Arabidopsis thaliana) 4 1 2 25 At1g17610 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 4 1 3 1 At1g17760 suppressor of forked protein family protein / SUF family protein Contains Pfam PF05843: Suppressor of forked protein (Suf); identical to cleavage stimulation factor 77 (GI:21591637) [Arabidopsis thaliana]; similar to suppressor of forked protein; Su(f) protein [Drosophila virilis] GI:4092534 4 1 3 2 At1g17800 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298; similar to basic blue protein GI:6688810 from [Medicago sativa] 4 1 3 3 At1g17960 "threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative similar to SP|O04630 Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Arabidopsis thaliana}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain, PF02824: TGS domain" 4 1 3 4 At1g18020 "12-oxophytodienoate reductase, putative similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]" 4 1 3 5 At1g18210 "calcium-binding protein, putative similar to SP|Q9M7R0 Calcium-binding allergen Ole e 8 (PCA18/PCA23) {Olea europaea}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 4 1 3 6 At1g18280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein GI:2627141 from (Picea abies); contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family 4 1 3 7 At1g21140 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 4 1 3 8 At1g21210 wall-associated kinase 4 4 1 3 9 At1g21380 "VHS domain-containing protein / GAT domain-containing protein weak similarity to Hrs [Rattus norvegicus] GI:8547026; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 4 1 3 10 At1g21440 mutase family protein similar to carboxyvinyl-carboxyphosphonate phosphorylmutase GB:O49290 from [Arabidopsis thaliana]; similar to carboxyphosphonoenolpyruvate mutase (GI:47149) [Streptomyces hygroscopicus]; contains Prosite PS00161: Isocitrate lyase signature 4 1 3 11 At1g21630 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain; ESTs gb|T44428 and gb|AA395440 come from this gene 4 1 3 12 At1g21690 "replication factor C 37 kDa, putative Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit (Replication factor C 37 kDa subunit, A1 37 kDa subunit, RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains Pfam domain, PF00004: ATPase, AAA family" 4 1 3 13 At1g21850 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 4 1 3 14 At1g21900 emp24/gp25L/p24 family protein similar to SP|O35587 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Mesocricetus auratus}; contains Pfam profile PF01105: emp24/gp25L/p24 family 4 1 3 15 At1g24470 short-chain dehydrogenase/reductase (SDR) family protein similar to b-keto acyl reductase GI:2586127 from [Hordeum vulgare] 4 1 3 16 At1g24520 anther-specific protein agp1 identical to agp1 GI:780177 from [Arabidopsis thaliana] 4 1 3 17 At1g24822 "expressed protein nearly identical to At1g24996, At1g25170, At1g25097; similar to ESTs dbj AV530941.1, dbj|AV530975.1, gb|BE037999.1, gb|BE037993.1, gb|AI995009.1, gb|AI099531.1, gb|N37906.1, gb|T76894.1" 4 1 3 18 At1g25141 UDP-3-0-acyl N-acetylglucosamine deacetylase family protein / F-box protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain and weak hit to Pfam PF00646: F-box domain; 4 1 3 19 At1g25350 "glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative similar to tRNA-glutamine synthetase GI:2995454 from [Lupinus luteus]" 4 1 3 20 At1g25400 expressed protein similar to unknown protein GI:6714347 from [Arabidopsis thaliana] 4 1 3 21 At1g25560 "AP2 domain-containing transcription factor, putative similar to DNA-binding protein RAV2 GI:3868859 from [Arabidopsis thaliana]" 4 1 3 22 At1g26090 hypothetical protein 4 1 3 23 At1g28960 MutT/nudix family protein similar to coenzyme A diphosphatase [Mus musculus] GI:12746410; contains Pfam profile PF00293: NUDIX domain 4 1 3 24 At1g29040 expressed protein 4 1 3 25 At1g29230 CBL-interacting protein kinase 18 (CIPK18) identical to CBL-interacting protein kinase 18 [Arabidopsis thaliana] gi|14334388|gb|AAK59695 4 1 4 1 At1g29290 expressed protein 4 1 4 2 At1g29430 auxin-responsive family protein similar to auxin-induced protein 10a 6B {SP:P33083) [Glycine max] 4 1 4 3 At1g29490 auxin-responsive family protein similar to auxin-induced protein X10A (SP:P33080) [Glycine max] 4 1 4 4 At1g29680 expressed protein 4 1 4 5 At1g29740 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 4 1 4 6 At1g32580 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor [Garden snapdragon] SWISS-PROT:Q38732" 4 1 4 7 At1g32650 hypothetical protein 4 1 4 8 At1g32810 expressed protein 4 1 4 9 At1g32880 "importin alpha-1 subunit, putative similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 4 1 4 10 At1g33050 expressed protein 4 1 4 11 At1g33090 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 4 1 4 12 At1g33290 sporulation protein-related isoform contains non-consensus AT-donor acceptor site at intron 6; similar to Stage III sporulation protein AA. (Swiss-Prot:Q01367) [Bacillus subtilis]; similar to SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to stage III sporulation protein AA (GI:18145497) [Clostridium perfringens str. 13] 4 1 4 13 At1g33390 "helicase domain-containing protein similar to kurz protein [Drosophila melanogaster] GI:5869803; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 4 1 4 14 At1g42540 "glutamate receptor family protein (GLR3.3) plant glutamate receptor family, PMID:11379626" 4 1 4 15 At1g42700 hypothetical protein 4 1 4 16 At1g43205 hypothetical protein 4 1 4 17 At1g43330 myb family protein-related contains similarity to myb protein [Gallus gallus] gi|63628|emb|CAA32767 4 1 4 18 At1g43690 ubiquitin interaction motif-containing protein contains Pfam profile PF02809: Ubiquitin interaction motif 4 1 4 19 At1g43760 hypothetical protein 4 1 4 20 At1g43980 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 1 4 21 At1g44050 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 1 4 22 At1g49140 "NADH-ubiquinone oxidoreductase-related similar to NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-12KD) (CI-12KD). (Swiss-Prot:Q03015) [Neurospora crassa]" 4 1 4 23 At1g49200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 1 4 24 At1g49390 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase GI:311658 from [Petunia hybrida], leucoanthocyanidin dioxygenase [Malus domestica][SP|P51091]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 4 1 4 25 At1g49450 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein GI:2739374 from [Arabidopsis thaliana]; no characterized homologs 4 1 5 1 At1g49630 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 4 1 5 2 At1g49680 hypothetical protein similar to hypothetical protein GB:CAA22965 GI:4218111 from [Arabidopsis thaliana] 4 1 5 3 At1g49870 expressed protein ; expression supported by MPSS 4 1 5 4 At1g49930 hypothetical protein 4 1 5 5 At1g52780 expressed protein 4 1 5 6 At1g52827 expressed protein 4 1 5 7 At1g52980 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 4 1 5 8 At1g53035 expressed protein 4 1 5 9 At1g53190 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHG1a GI:3822225 from [Arabidopsis thaliana]; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 4 1 5 10 At1g53260 "hypothetical protein low similarity to SP|Q38732 DAG protein, chloroplast precursor {Antirrhinum majus}" 4 1 5 11 At1g53400 expressed protein 4 1 5 12 At1g53450 expressed protein 4 1 5 13 At1g56060 expressed protein 4 1 5 14 At1g56110 "nucleolar protein Nop56, putative similar to XNop56 protein [Xenopus laevis] GI:14799394; contains Pfam profile PF01798: Putative snoRNA binding domain" 4 1 5 15 At1g56270 hypothetical protein 4 1 5 16 At1g56310 3'-5' exonuclease domain-containing protein contains Pfam profile PF01612: 3'-5' exonuclease 4 1 5 17 At1g56520 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 4 1 5 18 At1g56570 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 1 5 19 At1g57550 "hydrophobic protein, putative / low temperature and salt responsive protein, putative similar to SP|Q9ARD5 Low-temperature induced protein lt101.2 {Hordeum vulgare}, SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana}; contains Pfam profile PF01679: Uncharacterized protein family" 4 1 5 20 At1g57600 membrane bound O-acyl transferase (MBOAT) family protein low similarity to skinny hedgehog [Drosophila melanogaster] GI:15420842; contains Pfam profile PF03062: MBOAT family 4 1 5 21 At1g61470 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 4 1 5 22 At1g61550 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 4 1 5 23 At1g61700 "DNA-directed RNA polymerase II, putative (RPB10) identical to SP|Q9SYA6 DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) {Arabidopsis thaliana}; very strong similarity to SP|Q39290 DNA-directed RNA polymerase II 8.2 kDa polypeptide {Brassica napus}; contains Pfam profile: PF01194 RNA polymerases N / 8 kDa subunit" 4 1 5 24 At1g61760 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related similar to hin1 [Nicotiana tabacum] GI:1619321 4 1 5 25 At1g61930 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 4 1 6 1 At1g61990 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 4 1 6 2 At1g62190 expressed protein 4 1 6 3 At1g62250 expressed protein 4 1 6 4 At1g64950 "cytochrome P450, putative similar to cytochrome P450 89A2 (CYPLXIX) (SP:Q42602) [Arabidopsis thaliana];similar to cytochrome P450 (GI:438242) [Solanum melongena]" 4 1 6 5 At1g65010 expressed protein similar to endosome-associated protein (GI:1016368) [Homo sapiens]; similar to Centromeric protein E (CENP-E protein) (Swiss-Prot:Q02224) [Homo sapiens] 4 1 6 6 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 4 1 6 7 At1g65190 protein kinase family protein contains similarity to protein kinases 4 1 6 8 At1g65340 "cytochrome P450, putative similar to cytochrome P450 GI:4688670 from [Catharanthus roseus]" 4 1 6 9 At1g65390 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 4 1 6 10 At1g65570 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 5 [Lycopersicon esculentum] GI:2459817; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 4 1 6 11 At1g65640 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 4 1 6 12 At1g68380 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 4 1 6 13 At1g68440 expressed protein 4 1 6 14 At1g68580 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain and PF05641: Agenet domain 4 1 6 15 At1g68630 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 4 1 6 16 At1g68800 "TCP family transcription factor, putative similar to cyc2 protein [Misopates orontium]; residues 80 to 140 nearly identical to cyc1a protein (nuclear flower development gene cycloidea) GB:AAF07239 [Antirrhinum siculum]" 4 1 6 17 At1g68850 "peroxidase, putative identical to peroxidase ATP23a GB:CAA70035 (Arabidopsis thaliana)" 4 1 6 18 At1g69020 "prolyl oligopeptidase family protein similar to SP|Q59536 Protease II (EC 3.4.21.83) (Oligopeptidase B) {Moraxella lacunata}; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF02897: Prolyl oligopeptidase, N-terminal beta-propeller domain; contains non-consensus GA donor splice site at intron 5" 4 1 6 19 At1g69080 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 4 1 6 20 At1g71830 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 4 1 6 21 At1g71865 expressed protein supported by full length cDNA gi:26453011 from [Arabidopsis thaliana] 4 1 6 22 At1g72040 deoxynucleoside kinase family contains Pfam profile: PF01712 deoxynucleoside kinase 4 1 6 23 At1g72080 hypothetical protein 4 1 6 24 At1g72240 expressed protein 4 1 6 25 At1g72300 "leucine-rich repeat transmembrane protein kinase, putative similar to GI:3641252 from [Malus x domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))" 4 1 7 1 At1g72490 hypothetical protein 4 1 7 2 At1g72550 "tRNA synthetase beta subunit family protein contains Pfam profiles: PF03484 phenylalanine-tRNA synthetase, B5 domain, PF03483 B3/4 domain; an isoform contains a non-consensus TG acceptor splice site at a terminal exon." 4 1 7 3 AT5G57480 PC-1 A09 4 1 7 4 3XSSC PC-1 A21 4 1 7 5 AT1G29930 PC-1 E09 4 1 7 6 3XSSC PC-1 E21 4 1 7 7 AT3G44150 PC-1 I09 4 1 7 8 3XSSC PC-1 I21 4 1 7 9 AT4G00810 PC-1 M09 4 1 7 10 3XSSC PC-1 M21 4 1 7 11 At1g75310 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q27974 Auxilin {Bos taurus}; contains Pfam profile PF00226: DnaJ domain 4 1 7 12 At1g75380 wound-responsive protein-related similar to wound inducive gene GI:8096273 from [Nicotiana tabacum] 4 1 7 13 At1g75550 glycine-rich protein 4 1 7 14 At1g75630 vacuolar ATP synthase 16 kDa proteolipid subunit 4 / V-ATPase 16 kDa proteolipid subunit 4 (AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis thaliana}; contains Pfam profile PF00137: ATP synthase subunit C 4 1 7 15 At1g75820 CLAVATA1 receptor kinase (CLV1) identical to receptor kinase (CLV1) GB:AAB58929 GI:2160756 [Arabidopsis thaliana] 4 1 7 16 At1g75880 family II extracellular lipase 1 (EXL1) EXL1 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 4 1 7 17 At1g76050 "pseudouridine synthase family protein contains Pfam profiles: PF00849 RNA pseudouridylate synthase, PF01479: S4 domain" 4 1 7 18 At1g76090 S-adenosyl-methionine-sterol-C-methyltransferase identical to S-adenosyl-methionine-sterol-C-methyltransferase GI:2246456 from [Arabidopsis thaliana] 4 1 7 19 At1g78750 F-box family protein contains F-box domain Pfam:PF00646 4 1 7 20 At1g78790 expressed protein 4 1 7 21 At1g78915 expressed protein 4 1 7 22 At1g78960 "lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putative similar to lupeol synthase GI:1762150 from [Arabidopsis thaliana], 2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis thaliana] GI:2738027" 4 1 7 23 At1g79120 hypothetical protein 4 1 7 24 At1g79180 myb family transcription factor (MYB63) similar to myb-related protein GI:1370139 from [Lycopersicon esculentum] 4 1 7 25 At1g79390 expressed protein 4 1 8 1 At1g79430 myb family transcription factor-related 4 1 8 2 At2g01990 expressed protein 4 1 8 3 At2g02050 "NADH-ubiquinone oxidoreductase B18 subunit, putative contains Pfam PF05676: NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7); similar to NADH-ubiquinone oxidoreductase B18 subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B18) (CI-B18) (Cell adhesion protein SQM1) (Swiss-Prot:P17568) [Homo sapiens]; similar to NADH:ubiquinoe oxidoreductase NDUFB7 subunit (GI:9651635) [Homo sapiens]" 4 1 8 4 At2g02290 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 4 1 8 5 At2g02360 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 4 1 8 6 At2g02540 "zinc finger homeobox family protein / ZF-HD homeobox family protein contains Pfam domain, PF04770: ZF-HD protein dimerisation region" 4 1 8 7 At2g02590 expressed protein 4 1 8 8 At2g02770 "COP1-interacting protein-related similar to COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646, COP1-interacting protein 4.1 (CIP4.1) [Arabidopsis thaliana] GI:13160650" 4 1 8 9 At2g02820 myb family transcription factor (MYB88) 4 1 8 10 At2g06090 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 4 1 8 11 At2g06230 hypothetical protein 4 1 8 12 At2g06775 hypothetical protein 4 1 8 13 At2g06906 hypothetical protein 4 1 8 14 At2g07215 hypothetical protein 4 1 8 15 At2g07310 hypothetical protein 4 1 8 16 At2g07671 "H+-transporting two-sector ATPase, C subunit family protein similar to ATPase subunit 9 [Arabidopsis thaliana] GI:15215920; contains Pfam profile PF00137: ATP synthase subunit C" 4 1 8 17 At2g07675 ribosomal protein S12 mitochondrial family protein 4 1 8 18 At2g15185 zinc knuckle (CCHC-type) protein-related supported by tandem duplication of zinc knuckle (CCHC type) familyprotein (GI:4585917) (TIGR_Ath1:At2g15180) [Arabidopsis thaliana] 4 1 8 19 At2g15280 "reticulon family protein (RTNLB10) low similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311, SP|Q64548 Reticulon 1 (Neuroendocrine-specific protein) {Rattus norvegicus}; contains Pfam profile PF02453: Reticulon" 4 1 8 20 At2g15420 myosin heavy chain-related 4 1 8 21 At2g15480 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 1 8 22 At2g15640 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 4 1 8 23 At2g15710 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 4 1 8 24 At2g15960 expressed protein 4 1 8 25 At2g16020 hypothetical protein and genefinder 4 1 9 1 At2g18876 expressed protein 4 1 9 2 At2g18915 F-box family protein / LOV kelch protein 2 (LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex F-box subunit; identical to Adagio 2 GI:13487070 from [Arabidopsis thaliana]; contains Pfam profiles PF01344: Kelch motif and PF00646: F-box domain; identical to cDNA LOV kelch protein 2 GI:18146957; identical to cDNA Adagio 2 (ADO2) GI:13487069 4 1 9 3 At2g19080 metaxin-related contains 1 transmembrane domain; similar to Metaxin 1 (component of a preprotein import complex) (Swiss-Prot:P47802) [Mus musculus]; 4 1 9 4 At2g19160 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 4 1 9 5 At2g19360 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 4 1 9 6 At2g19420 hypothetical protein 4 1 9 7 At2g19600 "K+ efflux antiporter, putative (KEA4) similar to glutathione-regulated potassium-efflux system protein KEFB, Escherichia coli, SWISSPROT:P45522; Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; Note: non-consensus splice site (GC) in intron 14" 4 1 9 8 At2g19640 SET domain-containing protein contains Pfam profile PF00856: SET domain 4 1 9 9 At2g22300 "ethylene-responsive calmodulin-binding protein, putative (SR1) identical to partial sequence of ethylene-induced calmodulin-binding protein GI:11545505 from [Arabidopsis thaliana]; contains Pfam profiles PF03859: CG-1 domain, PF00612: IQ calmodulin-binding motif, and PF00023: Ankyrin repeat" 4 1 9 10 At2g22360 "DNAJ heat shock family protein similar to SP|Q9S5A3 Chaperone protein dnaJ {Listeria monocytogenes}; contains Pfam profiles PF00226 DnaJ domain, PF01556 DnaJ C terminal region, PF00684 DnaJ central domain (4 repeats)" 4 1 9 11 At2g22540 short vegetative phase protein (SVP) identical to cDNA short vegetative phase protein (SVP) GI:10944319; 4 1 9 12 At2g22620 expressed protein 4 1 9 13 At2g22795 expressed protein 4 1 9 14 At2g22850 bZIP transcription factor family protein contains a bZIP transcription factor basic domain signature (PDOC00036) 4 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 4 1 9 16 At2g23040 expressed protein ; expression supported by MPSS 4 1 9 17 At2g25880 "serine/threonine protein kinase, putative similar to serine/threonine kinase Ayk1 [Mus musculus] gi|1763647|gb|AAB62982" 4 1 9 18 At2g25940 "vacuolar processing enzyme alpha / alpha-VPE identical to SP|P49047 Vacuolar processing enzyme, alpha-isozyme precursor (EC 3.4.22.-) (Alpha-VPE) {Arabidopsis thaliana}" 4 1 9 19 At2g26120 glycine-rich protein 4 1 9 20 At2g26170 "thromboxane-A synthase, putative / cytochrome P450 family protein simiar to Thromboxane-A synthase (TXA synthase) (TXS) (SP:P47787) [Sus scrofa]; contains Pfam profile: PF00067: Cytochrome P450; supported by cDNA: gi_15810029_gb_AY054283.1_" 4 1 9 21 At2g26360 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 4 1 9 22 At2g26420 "1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 4 1 9 23 At2g26580 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein 4 1 9 24 At2g26610 expressed protein ; expression supported by MPSS 4 1 9 25 At2g29300 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 4 1 10 1 At2g29350 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 4 1 10 2 At2g29510 expressed protein 4 1 10 3 At2g29550 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} 4 1 10 4 At2g29690 "anthranilate synthase, alpha subunit, component I-2 (ASA2) identical to SP|P32069" 4 1 10 5 At2g29750 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 1 10 6 At2g29930 F-box family protein contains F-box domain Pfam:PF00646 4 1 10 7 At2g29960 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP5) / rotamase identical to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401 4 1 10 8 At2g32610 "cellulose synthase family protein similar to Zea mays cellulose synthase-3 [gi:9622878], -2 [gi:9622876], -1 [gi:9622874]" 4 1 10 9 At2g32650 expressed protein contains Pfam PF05899: Protein of unknown function (DUF861) 4 1 10 10 At2g32780 "ubiquitin-specific protease 1, putative (UBP1) similar to GI:11993461" 4 1 10 11 At2g32840 proline-rich family protein Common family member: At1g04930 [Arabidopsis thaliana] 4 1 10 12 At2g32990 "glycosyl hydrolase family 9 protein similar to endo-beta-1,4-glucanase GI:4972236 from [Fragaria x ananassa]" 4 1 10 13 At2g33050 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 4 1 10 14 At2g33230 "flavin-containing monooxygenase, putative / FMO, putative similar to flavin-containing monooxygenase YUCCA3 [Arabidopsis thaliana] GI:16555356" 4 1 10 15 At2g33280 integral membrane transporter family protein contains 9 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter 4 1 10 16 At2g35830 expressed protein 4 1 10 17 At2g35890 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase, isoform AK1 (CDPK). [Arabidopsis thaliana] SWISS-PROT:Q06850; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 4 1 10 18 At2g36040 expressed protein ; expression supported by MPSS 4 1 10 19 At2g36080 "DNA-binding protein, putative strong similarity to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 4 1 10 20 At2g36250 "chloroplast division protein FtsZ (FtsZ2-1) identical to chloroplast division protein AtFtsZ2-1 [Arabidopsis thaliana] GI:15636809, plastid division protein FtsZ [Arabidopsis thaliana] GI:14195704" 4 1 10 21 At2g36305 "CAAX amino terminal protease family protein similar to CAAX prenyl protease 2 (EC 3.4.22.-) (Prenyl protein-specific endoprotease 2) (Farnesylated-proteins converting enzyme 2) (FACE-2) from Mus musculus [SP|P57791], Homo sapiens [SP|Q9Y256], Drosophila melanogaster [SP|Q9U1H8]; contains Pfam profile PF02517 CAAX amino terminal protease family protein" 4 1 10 22 At2g36450 AP2 domain-containing protein low similarity to DREB1B GI:3738226 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain 4 1 10 23 At2g36500 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 4 1 10 24 At2g39100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 4 1 10 25 At2g39170 expressed protein 4 1 11 1 At2g39330 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, myrosinase binding protein [Brassica napus] GI:1711296; contains Pfam profile PF01419 jacalin-like lectin domain" 4 1 11 2 At2g39390 60S ribosomal protein L35 (RPL35B) 4 1 11 3 At2g39540 gibberellin-regulated family protein similar to SP|P27057 GAST1 protein precursor {Lycopersicon esculentum}; contains Pfam profile PF02704: Gibberellin regulated protein 4 1 11 4 At2g39620 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 1 11 5 At2g39730 "ribulose bisphosphate carboxylase/oxygenase activase / RuBisCO activase identical to SWISS-PROT:P10896 ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA)[Arabidopsis thaliana]" 4 1 11 6 At2g39780 "ribonuclease 2 (RNS2) identical to ribonuclease 2 precursor SP:P42814, GI:289210; contains a ribonuclease T2 family histidine active site signature (PDOC00459)" 4 1 11 7 At2g42250 cytochrome P450 family protein similar to cytochrome P450 93A1 (SP:Q42798) [Glycine max] 4 1 11 8 At2g42290 "leucine-rich repeat family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 4 1 11 9 At2g42460 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 4 1 11 10 At2g42500 serine/threonine protein phosphatase PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100 Serine/threonine protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 4 1 11 11 At2g42640 expressed protein weak similarity to EDR1 [Hordeum vulgare] GI:11127923 4 1 11 12 At2g42700 expressed protein 4 1 11 13 At2g42870 expressed protein 4 1 11 14 At2g42920 pentatricopeptide (PPR) repeat-containing protein and genefinder 4 1 11 15 At2g45600 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 4 1 11 16 At2g45640 sin3 associated polypeptide p18 family protein similar to Sin3 associated polypeptide p18 (2HOR0202) (Swiss-Prot:O00422) [Homo sapiens] 4 1 11 17 At2g45800 "LIM domain-containing protein similar to PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain protein PLIM1 [Nicotiana tabacum] GI:5932418; contains Pfam profile PF00412: LIM domain" 4 1 11 18 At2g45860 expressed protein 4 1 11 19 At2g46040 "ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein contains Pfam profiles PF01388: ARID/BRIGHT DNA binding domain, PF01448: ELM2 domain" 4 1 11 20 At2g46080 expressed protein 4 1 11 21 At2g46230 "expressed protein contains Pfam profile: PF04900 protein of unknown function, DUF652" 4 1 11 22 At2g46270 G-box binding factor 3 (GBF3) identical to G-box binding factor 3 (GBF3) SP:P42776 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 4 1 11 23 At3g01600 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 4 1 11 24 At3g01660 expressed protein similar to putative protein GB:CAB45319 [Arabidopsis thaliana] 4 1 11 25 At3g01840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 12 1 At3g01860 expressed protein 4 1 12 2 At3g02000 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 4 1 12 3 At3g02060 "DEAD/DEAH box helicase, putative similar to C-terminal half of transcription-repair coupling factor (TRCF) GB:Q55750 [Synechocystis PCC6803]; contains Pfam profile: helicases conserved C-terminal domain" 4 1 12 4 At3g02190 60S ribosomal protein L39 (RPL39B) similar to ribosomal protein L39 GB:P51424 [Arabidopsis thaliana] 4 1 12 5 At3g02230 reversibly glycosylated polypeptide-1 (RGP1) identical to reversibly glycosylated polypeptide-1 (AtRGP) [Arabidopsis thaliana] GI:2317729 4 1 12 6 At3g04850 "tesmin/TSO1-like CXC domain-containing protein similar to CXC domain containing TSO1-like protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC domain protein TSO1 [Arabidopsis thaliana] GI:7767425; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain" 4 1 12 7 At3g04910 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 12 8 At3g05080 expressed protein 4 1 12 9 At3g05130 expressed protein ; expression supported by MPSS 4 1 12 10 At3g05290 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 4 1 12 11 At3g05350 "aminopeptidase P, cytosolic, putative similar to cytosolic aminopeptidase P from [Homo sapiens] GI:8489879, [Rattus norvegicus] GI:2760920; contains Pfam profile PF00557: metallopeptidase family M24" 4 1 12 12 At3g05510 phospholipid/glycerol acyltransferase family protein similar to SP|Q16635 Tafazzin from Homo sapiens; contains Pfam profile: PF01553 Acyltransferase 4 1 12 13 At3g05560 60S ribosomal protein L22-2 (RPL22B) identical to 60S ribosomal protein L22-2 SP:Q9M9W1 from [Arabidopsis thaliana] 4 1 12 14 At3g08000 "RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:15822703, [Nicotiana sylvestris] GI:624925; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 4 1 12 15 At3g08040 "MATE efflux family protein low similarity to enhanced disease susceptibility 5 [Arabidopsis thaliana] GI:16589070; contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554 Uncharacterized membrane protein family" 4 1 12 16 At3g08640 alphavirus core protein family contains Pfam profile: PF00944 alphavirus core protein 4 1 12 17 At3g08700 "ubiquitin-conjugating enzyme, putative strong similar to ubiquitin-conjugating enzymes E2-17 from [Arabidopsis thaliana] SP|P35134, SP|P35132, SP|P35133; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 4 1 12 18 At3g08880 expressed protein 4 1 12 19 At3g08930 LMBR1 integral membrane family protein contains 5 transmembrane domains; contains Pfam PF04791: LMBR1-like conserved region; similar to unknown protein GB:BAA83351 [Oryza sativa] 4 1 12 20 At3g09040 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 1 12 21 At3g09090 defective in exine formation protein (DEX1) identical to defective in exine formation [Arabidopsis thaliana] gi|11138669|gb|AAG31444; contains Pfam domain PF01839: FG-GAP repeat 4 1 12 22 At3g11570 expressed protein similar to At5g06230 4 1 12 23 At3g11620 expressed protein similar to unknown protein GB:AAF00672 (Arabidopsis thaliana) 4 1 12 24 At3g11780 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein weak similarity to phosphatidylglycerol/phosphatidylinositol transfer protein [Aspergillus oryzae] GI:10178615; contains Pfam profile PF02221: ML domain 4 1 12 25 At3g11830 "chaperonin, putative similar to SWISS-PROT:P80313 T-complex protein 1, eta subunit (TCP-1-eta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 4 1 13 1 At3g11940 40S ribosomal protein S5 (RPS5B) similar to 40S ribosomal protein S5 GB:AAC98068 GI:4056502 from [Arabidopsis thaliana] 4 1 13 2 At3g11990 expressed protein 4 1 13 3 At3g12140 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 4 1 13 4 At3g12190 hypothetical protein 4 1 13 5 At3g14600 60S ribosomal protein L18A (RPL18aC) similar to GB:CAA08791 from [Podocoryne carnea] 4 1 13 6 At3g14660 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 4 1 13 7 At3g14840 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; contains 2 predicted transmembrane domains 4 1 13 8 At3g14860 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 4 1 13 9 At3g15000 expressed protein similar to DAG protein (required for chloroplast differentiation and palisade development) GB:Q38732 [Antirrhinum majus] 4 1 13 10 At3g15030 "TCP family transcription factor, putative similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]" 4 1 13 11 At3g15190 "chloroplast 30S ribosomal protein S20, putative contains Pfam profile: PF01649 ribosomal protein S20" 4 1 13 12 At3g15250 expressed protein ; expression supported by MPSS 4 1 13 13 At3g17820 "glutamine synthetase (GS1) identical to glutamine synthetase, cytosolic isozyme (glutamate-- ammonia ligase, GS1) [Arabidopsis thaliana] SWISS-PROT:Q9LVI8" 4 1 13 14 At3g17880 tetratricoredoxin (TDX) identical to tetratricoredoxin [Arabidopsis thaliana] GI:18041544; similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein-1) {Oryza sativa}; contains Pfam profile: PF00085 Thioredoxin 4 1 13 15 At3g18070 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 4 1 13 16 At3g18130 "guanine nucleotide-binding family protein / activated protein kinase C receptor (RACK1) identical to guanine nucleotide-binding protein; activated protein kinase C receptor; RACK1 (GI:9294068) {Arabidopsis thaliana}; contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies)" 4 1 13 17 At3g18270 "mandelate racemase/muconate lactonizing enzyme family protein low similarity to cis,cis-muconate lactonizing enzyme [Burkholderia sp. TH2] GI:23491535; contains Pfam profile: PF01188 Mandelate racemase/muconate lactonizing enzyme, C-terminal domain, PF02746: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain" 4 1 13 18 At3g18320 "F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI0197985){Arabidopsis thaliana]" 4 1 13 19 At3g18480 CCAAT displacement protein-related / CDP-related similar to CCAAT displacement protein (CDP) (Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens]; contains Pfam:PF00904 Involucrin repeat 4 1 13 20 At3g18524 DNA mismatch repair protein MSH2 (MSH2) identical to SP|O24617 DNA mismatch repair protein MSH2 (AtMsh2) {Arabidopsis thaliana} 4 1 13 21 At3g21215 "RNA-binding protein, putative contains RNA recognition motif, Pfam:PF00076; contains AT-AC splice sites at intron 8" 4 1 13 22 At3g21260 glycolipid transfer protein-related contains weak similarity to Glycolipid transfer protein (GLTP) (Swiss-Prot:P17403) [Sus scrofa] 4 1 13 23 At3g21440 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 4 1 13 24 At3g21500 "1-deoxy-D-xylulose 5-phosphate synthase, putative / 1-deoxyxylulose-5-phosphate synthase, putative / DXP-synthase, putative strong similarity to 1-D-deoxyxylulose 5-phosphate synthase [Lycopersicon esculentum] GI:5059160, DEF (deficient in photosynthesis) protein [Arabidopsis thaliana] GI:1399261; ; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain" 4 1 13 25 At3g21640 FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to rof1 [Arabidopsis thaliana] GI:1354207; contains Pfam profile: PF00254 FKBP-type peptidyl-prolyl cis-trans isomerases 4 1 14 1 At3g21700 expressed protein 4 1 14 2 At3g21830 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At8), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1b GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 4 1 14 3 At3g21880 zinc finger (B-box type) family protein contains similarity to zinc finger protein GB:BAA33206 from [Oryza sativa] 4 1 14 4 At3g24590 signal peptidase I family protein contains Pfam profile: PF00461 signal peptidase I 4 1 14 5 At3g24650 "abscisic acid-insensitive protein 3 (ABI3) identical to abscisic acid-insensitive protein 3 GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant Cell 4 (10), 1251-1261 (1992))" 4 1 14 6 At3g24820 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 4 1 14 7 At3g24880 expressed protein 4 1 14 8 At3g25140 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 4 1 14 9 At3g25180 cytochrome P450 family protein similar to cytochrome P450 monooxygenase GB:AAC49188 [Pisum sativum]; contains Pfam profile: PF00067 cytochrome P450 4 1 14 10 At3g25460 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 4 1 14 11 At3g25520 60S ribosomal protein L5 similar to 60S ribosomal protein L5 GB:P49625 from [Oryza sativa] 4 1 14 12 At3g28130 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 4 1 14 13 At3g28170 hypothetical protein 4 1 14 14 At3g28350 hypothetical protein 4 1 14 15 At3g28415 "P-glycoprotein, putative contains ATP-binding cassette; related to multi drug resistance proteins" 4 1 14 16 At3g28590 hypothetical protein 4 1 14 17 At3g28650 "DC1 domain-containing protein similar to hypothetical protein GI:4204272 from [Arabidopsis thaliana] contains weak PHD zinc finger motifs contains weak PHD zinc finger motifs DC1 domain, a divergent protein kinase C domain of unknown function." 4 1 14 18 At3g28830 expressed protein 4 1 14 19 At3g28880 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 4 1 14 20 At3g42660 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); AND-1 protein - Homo sapiens, EMBL:AJ006266" 4 1 14 21 At3g42723 hypothetical protein 4 1 14 22 At3g42910 expressed protein ; expression supported by MPSS 4 1 14 23 At3g42980 hypothetical protein 4 1 14 24 At3g43270 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 1 14 25 At3g43340 expressed protein 4 1 15 1 At3g43530 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 4 1 15 2 At3g43580 expressed protein 4 1 15 3 At3g46540 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Chain A Of The Epsin N-Terminal Homology (Enth) Domain (GI:8569264) [Rattus Norvegicus]; similar to Af10-protein (GI:1724114) [Avena fatua] 4 1 15 4 At3g46600 "scarecrow transcription factor family protein scarecrow-like 11 - Arabidopsis thaliana, EMBL:AF036307" 4 1 15 5 At3g46780 expressed protein 4 1 15 6 At3g46840 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo]; 4 1 15 7 At3g47020 F-box family protein contains F-box domain Pfam:PF00646 4 1 15 8 At3g47080 expressed protein 4 1 15 9 At3g47250 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 4 1 15 10 At3g47300 selenoprotein-related contains weak similarity to selenoprotein W (Swiss-Prot:P49904) [Rattus norvegicus] 4 1 15 11 At3g50090 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 4 1 15 12 At3g50150 expressed protein contains Pfam profile PF03140: Plant protein of unknown function; expression supported by MPSS 4 1 15 13 At3g50320 hypothetical protein 4 1 15 14 At3g50373 hypothetical protein 4 1 15 15 At3g50550 expressed protein isoform contains a non-consensus AT donor site at intron 1 4 1 15 16 At3g50590 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); some similarity to s-tomosyn isoform (GI:4689231)[Rattus norvegicus]; contains non-consensus AT-AC splice sites at intron 18 4 1 15 17 At3g50770 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]" 4 1 15 18 At3g50830 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505; identical to cDNA cold acclimation protein WCOR413-like protein beta form GI:10121842" 4 1 15 19 At3g53440 expressed protein 4 1 15 20 At3g53470 "expressed protein ribosomal protein S25, cytosolic, Arabidopsis thaliana, PIR:T08568" 4 1 15 21 At3g53610 "Ras-related GTP-binding protein, putative similar to Ras-related protein ARA-3 SP:P28186 from [Arabidopsis thaliana]" 4 1 15 22 At3g53650 "histone H2B, putative similar to histone H2B from Lycopersicon esculentum, PIR:T06389 GI:3021483, Gossypium hirsutum SP|O22582, Capsicum annuum SP|O49118; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 4 1 15 23 At3g53800 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 4 1 15 24 At3g53860 expressed protein several hypothetical proteins - Arabidopsis thaliana 4 1 15 25 At3g53990 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 4 1 16 1 At3g54020 phosphatidic acid phosphatase-related / PAP2-related 4 1 16 2 At3g56800 calmodulin-2/3/5 (CAM3) identical to calmodulin GI:474183 from [Arabidopsis thaliana]; almost identical to calmodulin-2/3/5 SP:P25069 [Arabidopsis thaliana] 4 1 16 3 At3g56860 UBP1 interacting protein 2a (UBA2a) identical to UBP1 interacting protein 2a [Arabidopsis thaliana] GI:19682816; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 1 16 4 At3g57030 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324] 4 1 16 5 At3g57090 expressed protein 4 1 16 6 At3g57270 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GI:16903144 from [Prunus persica]" 4 1 16 7 At3g57330 "calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA11) identical to SP|Q9M2L4|ACAB_ARATH Potential calcium-transporting ATPase 11, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis thaliana}; strong similarity to calmodulin-stimulated calcium-ATPase [Brassica oleracea] GI:1805654" 4 1 16 8 At3g57470 "peptidase M16 family protein / insulinase family protein contains weak similarity to Pfam domain, PF05193: Peptidase M16 inactive domain" 4 1 16 9 At3g57520 "alkaline alpha galactosidase, putative similar to alkaline alpha galactosidase II [Cucumis melo] GI:29838631; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1" 4 1 16 10 At3g60290 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase 1 [SP|Q96330], gibberellin 20-oxidase [GI:9791186]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 4 1 16 11 At3g60340 "palmitoyl protein thioesterase family protein palmitoyl-protein thioesterase precursor, Mus musculus, EMBL:AF071025" 4 1 16 12 At3g60510 "enoyl-CoA hydratase/isomerase family protein similar to enoyl-CoA-hydratase, Avicennia marina, EMBL:AF190450 [GI:6014701], CoA-thioester hydrolase CHY1 from Arabidopsis thaliana [GI:8572760]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 4 1 16 13 At3g60550 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 4 1 16 14 At3g60730 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 1 16 15 At3g60790 F-box protein-related contains weak hit to Pfam PF00646: F-box domain 4 1 16 16 At3g60950 C2 domain-containing protein similar to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain 4 1 16 17 At3g61035 cytochrome P450 family protein similar to Cytochrome P450 76C2 (SP:O64637) [Arabidopsis thaliana] 4 1 16 18 At4g00160 F-box family protein contains F-box domain Pfam:PF00646 4 1 16 19 At4g00210 LOB domain protein 31 / lateral organ boundaries domain protein 31 (LBD31) identical to SP|O81322 LOB domain protein 31 {Arabidopsis thaliana} 4 1 16 20 At4g00330 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 16 21 At4g00355 expressed protein 4 1 16 22 At4g00480 myc-related transcription factor (MYC1) identical to ATMYC1 GI:1853965 from [Arabidopsis thaliana] 4 1 16 23 At4g00530 hypothetical protein 4 1 16 24 At4g00650 FRIGIDA protein identical to Swiss-Prot:Q9FDW0 FRIGIDA protein [Arabidopsis thaliana] 4 1 16 25 At4g00690 "Ulp1 protease family protein similar to SUMO-1/Smt3-specific isopeptidase 2 [Mus musculus] GI:16118473, sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 4 1 17 1 At4g03170 hypothetical protein 4 1 17 2 At4g03205 "coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative " 4 1 17 3 At4g03350 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 4 1 17 4 At4g03410 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:P42925 22 kDa peroxisomal membrane protein [Mus musculus] 4 1 17 5 At4g03550 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 4 1 17 6 At4g03600 expressed protein 4 1 17 7 At4g03960 "tyrosine specific protein phosphatase family protein contains tyrosine specific protein phosphatases active site, PROSITE:PS00383" 4 1 17 8 At4g03990 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At3g30450, At5g34895, At3g47270, At2g02200" 4 1 17 9 At4g08760 hypothetical protein 4 1 17 10 At4g08820 hypothetical protein 4 1 17 11 At4g08960 "phosphotyrosyl phosphatase activator (PTPA) family protein similar to Protein phosphatase 2A, regulatory subunit B' (PP2A, subunit B', PR53 isoform) (Phosphotyrosyl phosphatase activator) (PTPA) (Swiss-Prot:Q28717) [Oryctolagus cuniculus]" 4 1 17 12 At4g09030 arabinogalactan-protein (AGP10) identical to gi|10880497|gb|AAG24278; supported by Ceres cDNA 265772 4 1 17 13 At4g09220 hypothetical protein 4 1 17 14 At4g09310 SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 4 1 17 15 At4g09510 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 4 1 17 16 At4g09560 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326" 4 1 17 17 At4g12320 "cytochrome P450, putative Similar to P450 monooxygenase (gi:14334057) [Gossypium arboreum]" 4 1 17 18 At4g12380 hypothetical protein 4 1 17 19 At4g12540 expressed protein 4 1 17 20 At4g12590 expressed protein contains Pfam PF05863: Eukaryotic protein of unknown function (DUF850) 4 1 17 21 At4g12770 auxilin-related low similarity to SP|Q27974 Auxilin {Bos taurus} 4 1 17 22 At4g12820 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 4 1 17 23 At4g13000 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 17 24 At4g13060 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 4 1 17 25 At4g15420 "PRLI-interacting factor K nearly identical to PRLI-interacting factor K [Arabidopsis thaliana] GI:11139266; contains Pfam profiles PF03152: Ubiquitin fusion degradation protein UFD1, PF00096: Zinc finger, C2H2 type" 4 1 18 1 At4g15475 "F-box family protein (FBL4) 99.7% identical to F-box protein family, AtFBL4 (GP:21536497) [Arabidopsis thaliana]; similar to grr1 GI:2407790 from [Glycine max]" 4 1 18 2 At4g15640 expressed protein 4 1 18 3 At4g15700 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 4 1 18 4 At4g15830 expressed protein 4 1 18 5 At4g15890 expressed protein 4 1 18 6 At4g16050 expressed protein 4 1 18 7 At4g16100 expressed protein 4 1 18 8 At4g18570 "proline-rich family protein common family members: At3g25690, At4g04980, At5g61090 [Arabidopsis thaliana]" 4 1 18 9 At4g18596 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 4 1 18 10 At4g18750 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 1 18 11 At4g18810 expressed protein similar to UV-B and ozone similarly regulated protein 1 UOS1 [Pisum sativum] GI:20339364 4 1 18 12 At4g18975 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 1 18 13 At4g19003 expressed protein contains Pfam PF05871: Eukaryotic protein of unknown function (DUF852) 4 1 18 14 At4g19140 expressed protein 4 1 18 15 At4g19185 integral membrane family protein contains Pfam profile:PF00892 integral membrane protein DUF6 4 1 18 16 At4g22030 "F-box family protein PF0064: F-box domain; similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 4 1 18 17 At4g22100 "glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max]; furostanol glycoside 26-O-beta-glucosidase F26G,Costus speciosus, PATCHX:S78099" 4 1 18 18 At4g22220 "iron-sulfur cluster assembly complex protein, putative similar to iron-sulfur cluster assembly complex ISCU1 (GI:11545705) [Homo sapiens]; nifU protein homolog YPL135w (GI:15619823) [Saccharomyces cerevisiae] PIR2:S69049" 4 1 18 19 At4g22250 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 1 18 20 At4g22390 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 4 1 18 21 At4g22450 hypothetical protein 4 1 18 22 At4g22640 "expressed protein various predicted proteins, Arabidopsis thaliana" 4 1 18 23 At4g22700 LOB domain family protein / lateral organ boundaries domain family protein (LBD32) identical to SP|O49651 Putative LOB domain protein 32 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 4 1 18 24 At4g25260 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Phaseolus vulgaris SP|Q43111, Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q42534; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 4 1 18 25 At4g25310 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Petunia x hybrida][GI:311658], [Solanum tuberosum][GI:1039356]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 4 1 19 1 At4g25440 WD-40 repeat family protein / zfwd1 protein (ZFWD1) identical to zfwd1 protein (GI:12057164) [Arabidopsis thaliana] 4 1 19 2 At4g25500 arginine/serine-rich splicing factor RSP40 (RSP40) identical to SP|P92965 Arginine/serine-rich splicing factor RSP40 {Arabidopsis thaliana} 4 1 19 3 At4g25670 expressed protein 4 1 19 4 At4g25710 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 4 1 19 5 At4g25880 pumilio/Puf RNA-binding domain-containing protein contains Pfam profile:PF00806 Pumilio-family RNA binding domains 4 1 19 6 At4g25940 "epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Chain B, Crystal Structure Of N-Terminal Domain Of Drosophila Ap180 (GP:13399617) [Drosophila melanogaster]; supporting cDNA gi|20465326|gb|AY096427.1|" 4 1 19 7 At4g28450 transducin family protein / WD-40 repeat family protein SOF1 (involved in rRNA processing) protein-yeast 4 1 19 8 At4g28500 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 4 1 19 9 At4g28660 "photosystem II reaction centre W (PsbW) family protein contains Pfam profile: PF03912 photosystem II reaction centre W protein, PsbW" 4 1 19 10 At4g28706 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 4 1 19 11 At4g28860 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 4 1 19 12 At4g28930 hypothetical protein 4 1 19 13 At4g29100 ethylene-responsive family protein contains similarity to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413 4 1 19 14 At4g29160 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 4 1 19 15 At4g31720 transcription initiation factor IID (TFIID) 23-30kDa subunit (TAF2H) family protein contains Pfam profile: PF03540 transcription initiation factor TFIID 23-30kDa 4 1 19 16 At4g31770 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 4 1 19 17 At4g31880 expressed protein 4 1 19 18 At4g31940 "cytochrome P450, putative cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153" 4 1 19 19 At4g32080 expressed protein ; expression supported by MPSS 4 1 19 20 At4g32130 expressed protein 4 1 19 21 At4g32300 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 4 1 19 22 At4g32370 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 4 1 19 23 AT5G57480 PC-1 A09 4 1 19 24 3XSSC PC-1 A21 4 1 19 25 AT1G29930 PC-1 E09 4 1 20 1 3XSSC PC-1 E21 4 1 20 2 AT3G44150 PC-1 I09 4 1 20 3 3XSSC PC-1 I21 4 1 20 4 AT4G00810 PC-1 M09 4 1 20 5 3XSSC PC-1 M21 4 1 20 6 At4g34910 "DEAD/DEAH box helicase, putative (RH16) identical to cDNA DEAD box RNA helicase, RH16 GI:3776006" 4 1 20 7 At4g34970 "actin-depolymerizing factor, putative similar to SP|Q9ZNT3 Actin-depolymerizing factor 5 (ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 4 1 20 8 At4g35120 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 4 1 20 9 At4g35170 "hypothetical protein predicted protein, Arabidopsis thaliana" 4 1 20 10 At4g35320 "expressed protein predicted protein, Arabidopsis thaliana" 4 1 20 11 At4g35370 transducin family protein / WD-40 repeat family protein contains 4 (3 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] 4 1 20 12 At4g35510 expressed protein 4 1 20 13 At4g35570 high mobility group protein delta (HMGdelta) / HMG protein delta identical to HMG protein (HMGdelta) [Arabidopsis thaliana] GI:2832363 4 1 20 14 At4g38220 "aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative similar to aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase, ACY-1)[Homo sapiens] SWISS-PROT:Q03154" 4 1 20 15 At4g38240 "alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative similar to N-acetylglucosaminyltransferase I from Arabidopsis thaliana [gi:5139335]; contains AT-AC non-consensus splice sites at intron 13" 4 1 20 16 At4g38420 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 4 1 20 17 At4g38490 expressed protein 4 1 20 18 At4g38650 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 4 1 20 19 At4g38710 "glycine-rich protein cylicin II - bovine, PIR2:I46014" 4 1 20 20 At4g38890 "dihydrouridine synthase family protein contains Pfam domain, PF01207: Dihydrouridine synthase (Dus)" 4 1 20 21 At4g38930 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 4 1 20 22 At5g02340 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 1 20 23 At5g02400 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 4 1 20 24 At5g02550 expressed protein 4 1 20 25 At5g02590 "chloroplast lumen common family protein various predicted proteins, Arabidopsis thaliana" 4 1 21 1 At5g02740 expressed protein 4 1 21 2 At5g02790 "In2-1 protein, putative similar to In2-1, Zea mays, EMBL:X58573" 4 1 21 3 At5g02950 "PWWP domain-containing protein predicted protein, Arabidopsis thaliana" 4 1 21 4 At5g03010 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (1 repeat) 4 1 21 5 At5g05690 cytochrome P450 90A1 (CYP90A1) (CYP90) (CPD) identical to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana] 4 1 21 6 At5g05740 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains Pfam PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 4 1 21 7 At5g05910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 1 21 8 At5g05950 expressed protein 4 1 21 9 At5g06100 myb family transcription factor (MYB33) contains Pfam profile: PF00249 myb DNA-binding domain 4 1 21 10 At5g06140 phox (PX) domain-containing protein similar to SP|O60749 Sorting nexin 2 {Homo sapiens}; contains Pfam profile PF00787: PX domain 4 1 21 11 At5g06280 expressed protein similar to unknown protein (pir||T08447) 4 1 21 12 At5g06330 "hairpin-responsive protein, putative (HIN1) similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum]" 4 1 21 13 At5g09410 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from [Nicotiana tabacum] 4 1 21 14 At5g09470 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 4 1 21 15 At5g09650 inorganic pyrophosphatase family protein similar to SP|Q15181 Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate {Homo sapiens}; contains Pfam profile PF00719: inorganic pyrophosphatase 4 1 21 16 At5g09700 glycosyl hydrolase family 3 protein contains Pfam profile PF01915: Glycosyl hydrolase family 3 C terminal domain 4 1 21 17 At5g09880 RNA recognition motif (RRM)-containing protein 4 1 21 18 At5g09920 RNA polymerase II 15.9 kDa subunit (RPB15.9) identical to 15.9 kDa subunit of RNA polymerase II GI:2760362 from [Arabidopsis thaliana] 4 1 21 19 At5g10070 "RNase L inhibitor protein-related contains Pfam profiles PF04034: Domain of unknown function (DUF367), PF04068: Possible metal-binding domain in RNase L inhibitor, RLI" 4 1 21 20 At5g10110 expressed protein 4 1 21 21 At5g13250 hypothetical protein 4 1 21 22 At5g13290 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 21 23 At5g13470 expressed protein 4 1 21 24 At5g13510 "ribosomal protein L10 family protein ribosomal protein L10- Nicotiana tabacum, EMBL:AB010879" 4 1 21 25 At5g13660 expressed protein 4 1 22 1 At5g13720 expressed protein 4 1 22 2 At5g13880 expressed protein 4 1 22 3 At5g13940 hypothetical protein 4 1 22 4 At5g16700 "glycosyl hydrolase family 5 protein / cellulase family protein cellulase (EC 3.2.1.4) precursor - Xanthomonas campestris pv. campestris, PIR:JH0158" 4 1 22 5 At5g16750 "transducin family protein / WD-40 repeat family protein contains 8 WD-40 repeats (PF00400); similar to transducin homolog sazD - Homo sapiens, EMBL:U02609" 4 1 22 6 At5g16880 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate [Homo sapiens] GI:2731383; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 4 1 22 7 At5g16940 expressed protein contains Pfam profile PF04828: Protein of unknown function (DUF636) 4 1 22 8 At5g17110 hypothetical protein 4 1 22 9 At5g17170 rubredoxin family protein contains Pfam profile PF00301: Rubredoxin 4 1 22 10 At5g17320 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to Roc1 (GI:1907210) [Oryza sativa]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 4 1 22 11 At5g17380 pyruvate decarboxylase family protein similar to 2-hydroxyphytanoyl-CoA lyase [Homo sapiens] GI:6273457; contains InterPro entry IPR000399: Pyruvate decarboxylase 4 1 22 12 At5g19950 expressed protein 4 1 22 13 At5g20000 "26S proteasome AAA-ATPase subunit, putative almost identical to 26S proteasome AAA-ATPase subunit RPT6a GI:6652888 from [Arabidopsis thaliana]; almost identical to a member of conserved Sug1 CAD family AtSUG1 GI:13537115 from [Arabidopsis thaliana]" 4 1 22 14 At5g20160 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 4 1 22 15 At5g20180 ribosomal protein L36 family protein contains Pfam profile: PF00444 ribosomal protein L36 4 1 22 16 At5g20370 serine-rich protein-related contains some similarity to serine-rich proteins 4 1 22 17 At5g20430 mob1/phocein family protein contains Pfam profile: PF03637 mob1/phocein family 4 1 22 18 At5g20600 expressed protein 4 1 22 19 At5g20650 copper transporter family protein similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family 4 1 22 20 At5g23950 C2 domain-containing protein similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 4 1 22 21 At5g24010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 1 22 22 At5g24165 expressed protein 4 1 22 23 At5g24220 lipase class 3-related 4 1 22 24 At5g24330 "PHD finger family protein / SET domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF00856: SET domain" 4 1 22 25 At5g24380 "transporter, putative similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 4 1 23 1 At5g24560 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 4 1 23 2 At5g24600 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 4 1 23 3 At5g27540 GTP-binding protein-related low similarity to Mig-2-like GTPase Mtl [Drosophila melanogaster] GI:7271872; contains Pfam profile PF00036: EF hand 4 1 23 4 At5g27600 "AMP-binding protein, putative similar to AMP-binding protein (MF39P) gi:1617274 from Brassica napus, long-chain-fatty-acid--CoA ligase - Brassica napus, EMBL:Z72152; contains Pfam AMP-binding enzyme domain PF00501" 4 1 23 5 At5g27770 "60S ribosomal protein L22 (RPL22C) ribosomal protein L22 (cytosolic), Rattus norvegicus, PIR:S52084" 4 1 23 6 At5g27830 expressed protein 4 1 23 7 At5g27980 seed maturation family protein similar to SP|P09444 Late embryogenesis abundant protein D-34 (LEA D-34) {Gossypium hirsutum}; contains Pfam profile PF04927: Seed maturation protein 4 1 23 8 At5g28040 "expressed protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 4 1 23 9 At5g28237 "tryptophan synthase, beta subunit, putative similar to SP|P14671 Tryptophan synthase beta chain 1, chloroplast precursor (EC 4.2.1.20) {Arabidopsis thaliana}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 4 1 23 10 At5g28295 hypothetical protein 4 1 23 11 At5g36220 cytochrome P450 81D1 (CYP81D1) (CYP91A1) Identical to Cytochrome P450 (SP:Q9FG65) [Arabidopsis thaliana]; 4 1 23 12 At5g36280 hypothetical protein 4 1 23 13 At5g36840 "hypothetical protein similar to At3g24380, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 4 1 23 14 At5g36900 hypothetical protein 4 1 23 15 At5g37060 "cation/hydrogen exchanger, putative (CHX24) similar to Na+/H+-exchanging protein NapA - Enterococcus hirae, PIR:A42111; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 4 1 23 16 At5g37120 hypothetical protein hypothetical proteins - Arabidopsis thaliana 4 1 23 17 At5g37290 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 4 1 23 18 At5g37360 expressed protein 4 1 23 19 At5g40210 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 4 1 23 20 At5g40270 metal-dependent phosphohydrolase HD domain-containing protein similar to SP|Q60710 Interferon-gamma inducible protein MG11 {Mus musculus}; contains Pfam profile PF01966: HD domain 4 1 23 21 At5g40450 expressed protein 4 1 23 22 At5g40510 expressed protein 4 1 23 23 At5g40640 expressed protein 4 1 23 24 At5g40690 expressed protein 4 1 23 25 At5g40860 hypothetical protein 4 1 24 1 At5g40930 mitochondrial import receptor subunit TOM20-4 / translocase of outer membrane 20 kDa subunit 4 identical to mitochondrial import receptor subunit TOM20-4 SP:P82805 from [Arabidopsis thaliana] 4 1 24 2 At5g43600 "N-carbamyl-L-amino acid hydrolase, putative similar to N-carbamoyl-L-amino acid hydrolase [Bacillus stearothermophilus] SWISS-PROT:Q53389" 4 1 24 3 At5g43660 expressed protein similar to unknown protein (gb|AAB72163.1) 4 1 24 4 At5g43840 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 4 1 24 5 At5g43900 myosin heavy chain (MYA2) nearly identical to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis thaliana] 4 1 24 6 At5g44030 "cellulose synthase, catalytic subunit (IRX5) nearly identical to cellulose synthase [Arabidopsis thaliana] GI:27462651; contains Pfam profile PF03552: Cellulose synthase" 4 1 24 7 At5g44090 "calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative contains Pfam profile: PF00036 EF hand; identical to cDNA protein phosphatase 2A 62 kDa B'' regulatory subunit GI:5533378" 4 1 24 8 At5g44260 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 1 24 9 At5g44310 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to 51 kDa seed maturation protein [Glycine max] GI:414977; contains Pfam profile PF02987: Late embryogenesis abundant protein 4 1 24 10 At5g46820 hypothetical protein contains similarity to carboxyl-terminal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function 4 1 24 11 At5g46875 hypothetical protein 4 1 24 12 At5g47040 "Lon protease homolog 1, mitochondrial (LON) identical to Lon protease homolog 1 mitochondrial precursor SP:O64948 from [Arabidopsis thaliana]" 4 1 24 13 At5g47080 "casein kinase II beta chain, putative similar to casein kinase II beta chain (CK II) [Arabidopsis thaliana] SWISS-PROT:P40228" 4 1 24 14 At5g47240 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 4 1 24 15 At5g47300 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to unknown protein (emb|CAB62106.1) 4 1 24 16 At5g47455 expressed protein 4 1 24 17 At5g47460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 1 24 18 At5g50115 hypothetical protein temporary automated functional assignment 4 1 24 19 At5g50170 "C2 domain-containing protein / GRAM domain-containing protein low similarity to SP|P40748 Synaptotagmin III (SytIII) {Rattus norvegicus}; contains Pfam profiles PF00168: C2 domain, PF02893: GRAM domain" 4 1 24 20 At5g50330 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 4 1 24 21 At5g50375 cyclopropyl isomerase (CPI1) 4 1 24 22 At5g50550 "WD-40 repeat family protein / St12p protein, putative contains 4 WD-40 repeats (PF0400); similar to St12p protein GI:166878 [Arabidopsis thaliana]" 4 1 24 23 At5g50600 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 4 1 24 24 At5g50810 "mitochondrial import inner membrane translocase (TIM8) identical to mitochondrial import inner membrane translocase subunit Tim8 [Arabidopsis thaliana] Swiss-Prot:Q9XGY4; contains Pfam domain, PF02953: Tim10/DDP family zinc finger" 4 1 24 25 At5g50850 "pyruvate dehydrogenase E1 component beta subunit, mitochondrial / PDHE1-B (PDH2) identical to SP|Q38799 Pyruvate dehydrogenase E1 component beta subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) {Arabidopsis thaliana}" 4 1 25 1 At5g53580 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 4 1 25 2 At5g53650 expressed protein 4 1 25 3 At5g53830 VQ motif-containing protein contains PF05678: VQ motif 4 1 25 4 At5g53860 expressed protein 4 1 25 5 At5g54020 expressed protein 4 1 25 6 At5g54067 "expressed protein low similarity to VIVIPAROUS1 protein from [Triticum aestivum] GI:7801372, [Hordeum vulgare subsp. vulgare] GI:1730475" 4 1 25 7 At5g54210 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 4 1 25 8 At5g54270 chlorophyll A-B binding protein / LHCII type III (LHCB3) identical to Lhcb3 protein [Arabidopsis thaliana] GI:4741952; contains Pfam profile PF00504: Chlorophyll A-B binding protein 4 1 25 9 At5g56990 expressed protein ; expression supported by MPSS 4 1 25 10 At5g57035 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 4 1 25 11 At5g57160 "DNA ligase IV identical to DNA ligase IV GI:9651815 from [Arabidopsis thaliana]; identical to cDNA DNA ligase IV, GI:9651814" 4 1 25 12 At5g57200 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related low similarity to clathrin assembly protein AP180 [Xenopus laevis] GI:6492344; contains Pfam profile PF01417: ENTH domain 4 1 25 13 At5g57360 "F-box family protein / LOV kelch protein 1 (LKP1) E3 ubiquitin ligase SCF complex F-box subunit; identical to clock-associated PAS protein ZTL; ZEITLUPE GI:7839456, LOV kelch protein 1 GI:11610573, Adagio 1 GI:13487068 from [Arabidopsis thaliana]; contains Pfam profile PF01344: Kelch motif; identical to cDNA Adagio 1 (ADO1) GI:13487067; identical to cDNA LKP1 mRNA for LOV kelch protein 1, GI:11610572" 4 1 25 14 At5g57420 auxin-responsive factor-related contains weak similarity to Swiss-Prot:P33078 auxin-responsive protein IAA5 (Indoleacetic acid-induced protein 5) (Auxin-induced protein AUX2-27) [Arabidopsis thaliana] 4 1 25 15 At5g57590 "aminotransferase class III family protein low similarity to 7,8-diaminopelargonic acid aminotransferase BioA [Mesorhizobium loti] GI:12044306; contains Pfam profile PF00202: aminotransferase, class III" 4 1 25 16 At5g57640 hypothetical protein 4 1 25 17 At5g60180 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 4 1 25 18 At5g60230 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 4 1 25 19 At5g60400 expressed protein 4 1 25 20 At5g60410 "DNA-binding family protein contains Pfam profiles: PF02037 SAP domain, PF02891 MIZ zinc finger, PF00628 PHD-finger" 4 1 25 21 At5g60590 yrdC protein-related 4 1 25 22 At5g60630 "expressed protein predicted protein, Arabidopsis thaliana" 4 1 25 23 At5g60790 ABC transporter family protein similar to ABC transporter homolog PnATH GI:7573600 from [Populus nigra] 4 1 25 24 At5g60850 Dof-type zinc finger domain-containing protein similar to zinc finger protein OBP4 gi:5059396 from [Arabidopsis thaliana]; EMBL:AF155817 4 1 25 25 At5g63530 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840]; nearly identical to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 4 1 26 1 At5g63590 "flavonol synthase, putative similar to SP|Q96330 Flavonol synthase 1 (EC 1.14.11.-) (FLS 1) {Arabidopsis thaliana}; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 4 1 26 2 At5g63760 IBR domain-containing protein contains similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR domain 4 1 26 3 At5g63820 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 4 1 26 4 At5g63980 "3'(2'),5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase / FIERY1 protein (FRY1) (SAL1) identical to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) {Arabidopsis thaliana}; identical to cDNA inositol polyphosphate 1-phosphatase FIERY1 (FRY1) GI:15281147" 4 1 26 5 At5g64020 expressed protein strong similarity to unknown protein (pir||T02538) 4 1 26 6 At5g64190 expressed protein 4 1 26 7 At5g64230 expressed protein 4 1 26 8 At5g66640 LIM domain-containing protein-related contains low similarity to Pfam profile PF00412: LIM domain 4 1 26 9 At5g66690 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 1 26 10 At5g66840 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 4 1 26 11 At5g66900 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 4 1 26 12 At5g67040 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 4 1 26 13 At5g67100 "DNA-directed DNA polymerase alpha catalytic subunit, putative similar to SP|O48653 DNA polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza sativa}; contains Pfam profiles: PF03175 DNA polymerase type B, organellar and viral, PF00136 DNA polymerase family B, PF03104 DNA polymerase family B, exonuclease domain" 4 1 26 14 At5g67250 SKP1 interacting partner 2 (SKIP2) identical to SKP1 interacting partner 2 GI:10716949 from [Arabidopsis thaliana] 4 1 26 15 At5g67310 cytochrome P450 family protein 4 1 26 16 At3g42660 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); AND-1 protein - Homo sapiens, EMBL:AJ006266" 4 1 26 17 At3g42723 hypothetical protein 4 1 26 18 At3g42910 expressed protein ; expression supported by MPSS 4 1 26 19 At3g42980 hypothetical protein 4 1 26 20 At3g43270 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 1 26 21 At3g43340 expressed protein 4 1 26 22 At3g43530 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 4 1 26 23 At3g43580 expressed protein 4 1 26 24 Blank Blank 4 1 26 25 Blank Blank 4 2 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 4 2 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 4 2 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 4 2 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 4 2 1 5 atc06 Randomly generated negative control 4 2 1 6 atc12 Randomly generated negative control 4 2 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 4 2 1 8 atc02 Randomly generated negative control 4 2 1 9 At1g03457 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 4 2 1 10 At1g03530 expressed protein similar to hypothetical protein GB:O14360 4 2 1 11 At1g03720 cathepsin-related contains weak similarity to Cathepsin L precursor (EC 3.4.22.15) (Major excreted protein) (MEP) (Cyclic protein-2) (CP-2) (Swiss-Prot:P07154) [Rattus norvegicus] 4 2 1 12 At1g03780 targeting protein-related similar to microtubule-associated protein / targeting protein for Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to Restricted expression proliferation associated protein 100 (p100) (Differentially expressed in lung cells 2) (DIL-2) (Targeting protein for Xklp2) (C20orf1 protein) (C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo sapiens} 4 2 1 13 At1g03905 ABC transporter family protein similar to NBD-like protein GB:AAD20643 4 2 1 14 At1g03960 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 4 2 1 15 At1g04120 ABC transporter family protein Strong similarity to MRP-like ABC transporter gb|U92650 from A. thaliana and canalicular multi-drug resistance protein gb|L49379 from Rattus norvegicus 4 2 1 16 At1g04160 "myosin family protein contains Pfam profiles: PF02736 myosin N-terminal SH3-like domain, PF00063 myosin head (motor domain), PF00612 IQ calmodulin-binding motif, PF01843: DIL domain" 4 2 1 17 At1g06800 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 4 2 1 18 At1g06870 "signal peptidase, putative similar to chloroplast thylakoidal processing peptidase GB:CAA71502 GI:2769566 from [Arabidopsis thaliana]; contains Pfam profile PF00461: Signal peptidase I" 4 2 1 19 At1g07030 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 4 2 1 20 At1g07090 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 4 2 1 21 At1g07270 "cell division control protein CDC6b, putative (CDC6b) identical to CDC6b protein (GI:18056482) {Arabidopsis thaliana}; contains Prosite PS00017: ATP/GTP-binding site motif A (P-loop); identical to cDNA CDC6b GI:18056481" 4 2 1 22 At1g07320 "50S ribosomal protein L4, chloroplast (CL4) identical to SP:O50061 from [Arabidopsis thaliana]" 4 2 1 23 At1g07450 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 4 2 1 24 At1g07480 transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) identical to transcription factor IIA large subunit GI:2826884 from [Arabidopsis thaliana] 4 2 1 25 At1g09970 "leucine-rich repeat transmembrane protein kinase, putative Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene isoform contains a TG acceptor site at intron." 4 2 2 1 At1g10010 "amino acid permease, putative similar to amino acid permease I GI:22641 from [Arabidopsis thaliana]; GC splice site at position 1256 is predicted from alignment and not confirmed experimentally" 4 2 2 2 At1g10170 NF-X1 type zinc finger family protein contains Pfam PF01422: NF-X1 type zinc finger; similar to transcriptional repressor NF-X1 (SP:Q12986) [Homo sapiens]; similar to EST gb|T21002 4 2 2 3 At1g10230 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At18), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 [Arabidopsis thaliana]" 4 2 2 4 At1g10390 "nucleoporin family protein contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family" 4 2 2 5 At1g10455 hypothetical protein 4 2 2 6 At1g10590 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 4 2 2 7 At1g10640 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 4 2 2 8 At1g13300 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 4 2 2 9 At1g13360 expressed protein 4 2 2 10 At1g13530 expressed protein ; expression supported by MPSS 4 2 2 11 At1g13580 longevity-assurance (LAG1) family protein similar to Alternaria stem canker resistance protein (ASC1) [Lycopersicon esculentum] GI:7688742; contains Pfam profile PF03798: Longevity-assurance protein (LAG1) 4 2 2 12 At1g13770 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647; contains non-consensus (GC) splice site at intron 2" 4 2 2 13 At1g13830 "beta-1,3-glucanase-related similar to beta-1,3-glucanase-like protein (GI:14279169) [Olea europaea] similar to Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1-3)-beta- glucan endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3- endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]" 4 2 2 14 At1g14010 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 4 2 2 15 At1g14080 "xyloglucan fucosyltransferase, putative (FUT6) nearly identical to SP|Q9XI80 Probable fucosyltransferase 6 (EC 2.4.1.-) (AtFUT6) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from (Arabidopsis thaliana)" 4 2 2 16 At1g16700 "NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative very strong similarity to SP|Q42599 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23KD) (CI-23KD) (Complex I- 28.5KD) (CI-28.5KD) {Arabidopsis thaliana}; contains Pfam profile PF00037: iron-sulfur cluster-binding protein" 4 2 2 17 At1g16750 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 4 2 2 18 At1g16880 uridylyltransferase-related similar to [Protein-PII] uridylyltransferase (PII uridylyl- transferase) (Uridylyl removing enzyme) (UTase)(SP:Q9AC53) [Caulobacter crescentus] 4 2 2 19 At1g16920 "Ras-related GTP-binding protein, putative similar to GTP binding protein GI:218228 from [Vicia faba]; identical to cDNA small GTP-binding protein (Rab11) GI:451859" 4 2 2 20 At1g17110 "ubiquitin-specific protease 15 (UBP15) almost identical to ubiquitin-specific protease 15 GI:11993475 [Arabidopsis thaliana], 7 amino acid difference" 4 2 2 21 At1g17160 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 4 2 2 22 At1g17340 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to cDNA SAC domain protein 5 (SAC5) GI:31415726" 4 2 2 23 At1g17390 hypothetical protein 4 2 2 24 At1g20280 homeobox-leucine zipper protein-related similar to SP|Q02283 Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) {Arabidopsis thaliana} 4 2 2 25 At1g20340 plastocyanin similar to plastocyanin GI:1865683 from [Arabidopsis thaliana] 4 2 3 1 At1g20510 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to SP|P14912 and SP|P14913 from Petroselinum crispum; contains Pfam AMP-binding enzyme domain PF00501 4 2 3 2 At1g20560 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to adenosine monophosphate binding protein 1 AMPBP1 (AMPBP1) GI:20799710 4 2 3 3 At1g20700 homeobox-leucine zipper family protein strong similarity to homeodomain protein PALE-2 (GI:20152544) [Arabidopsis thaliana]; contains Pfam profile: PF00046 homeobox domain 4 2 3 4 At1g20760 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 4 2 3 5 At1g20920 "DEAD box RNA helicase, putative similar to RNA helicase [Rattus norvegicus] GI:897915; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 4 2 3 6 At1g20970 adhesin-related contains TIGRFAM TIGR01612: reticulocyte binding protein; contains TIGRFAM TIGR00864: polycystin cation channel protein; similar to fimbriae-associated protein Fap1 [Streptococcus parasanguinis] (GI:3929312) 4 2 3 7 At1g23660 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 4 2 3 8 At1g23700 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 2 3 9 At1g23860 "splicing factor RSZp21 (RSZP21) / 9G8-like SR protein (SRZ21) nearly identical to 9G8-like splicing factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21 protein [Arabidopsis thaliana] GI:2582643" 4 2 3 10 At1g23890 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 4 2 3 11 At1g24040 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 4 2 3 12 At1g24110 "peroxidase, putative similar to peroxidase ATP26a, GB:CAA72487" 4 2 3 13 At1g24260 "MADS-box protein (AGL9) strongly similar to GB:O22456, MADS-box protein, Location of EST gb|H37053" 4 2 3 14 At1g24290 "AAA-type ATPase family protein similar to Werner helicase interacting protein [Homo sapiens] GI:14349166; contains Pfam profiles PF00004: ATPase family associated with various cellular activities (AAA), PF00627: UBA/TS-N domain; contains ATP/GTP-binding site motif A (P-loop)" 4 2 3 15 At1g28020 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 2 3 16 At1g28080 expressed protein 4 2 3 17 At1g28210 "DNAJ heat shock protein, putative strong similarity to mitochondrial DnaJ protein (AtJ1) GI:564030 from [Arabidopsis thaliana]; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats); identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029" 4 2 3 18 At1g28250 expressed protein 4 2 3 19 At1g28380 expressed protein 4 2 3 20 At1g28400 expressed protein similar to E6 (GI:1000090) [Gossypium barbadense] 4 2 3 21 At1g28570 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 4 2 3 22 At1g28600 "lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 4 2 3 23 At1g31760 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 4 2 3 24 At1g31812 acyl-CoA binding protein / ACBP identical to acyl-CoA-binding protein (ACBP) [Arabidopsis thaliana] SWISS-PROT:P57752 4 2 3 25 At1g31970 "DEAD/DEAH box helicase, putative similar to p68 RNA helicase [Schizosaccharomyces pombe] GI:173419" 4 2 4 1 At1g32040 hypothetical protein 4 2 4 2 At1g32230 "WWE domain-containing protein / ceo protein, putative (CEO) contains Pfam domain, PF02825: WWE domain; identical to cDNA for ceo protein (ceo gene) GI:11044956" 4 2 4 3 At1g32270 "syntaxin, putative similar to syntaxin related protein AtVam3p (GP:8809669) (Arabidopsis thaliana); similar to syntaxin GB:CAB78776 GI:7268526 from (Arabidopsis thaliana); contains Pfam profile PF05739: SNARE domain" 4 2 4 4 At1g32400 senescence-associated family protein contains Pfam profile PF00335: Tetraspanin family 4 2 4 5 At1g32430 F-box family protein contains F-box domain Pfam:PF00646 4 2 4 6 At1g35950 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 4 2 4 7 At1g36070 WD-40 repeat family protein contains 2 WD-40 repeats (PF0400);similar to guanine nucleotide-binding protein beta subunit GPBA (SP:P36408) [Dictyostelium discoideum (Slime mold)]; similar to katanin p80 (WD40-containing) subunit B 1 (GI:12655011) [Homo sapiens] 4 2 4 8 At1g36510 hypothetical protein 4 2 4 9 At1g36730 "eukaryotic translation initiation factor 5, putative / eIF-5, putative similar to SP|P55876 Eukaryotic translation initiation factor 5 (eIF-5) {Zea mays}; contains Pfam profiles PF02020: eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in IF2B/IF5" 4 2 4 10 At1g37050 hypothetical protein 4 2 4 11 At1g37275 hypothetical protein 4 2 4 12 At1g41750 hypothetical protein 4 2 4 13 At1g41860 hypothetical protein 4 2 4 14 At1g48220 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 4 2 4 15 At1g48280 hydroxyproline-rich glycoprotein family protein 4 2 4 16 At1g48450 expressed protein 4 2 4 17 At1g48510 cytochrome c oxidase assembly protein surfeit-related contains similarity to Swiss-Prot:Q9QXU2 surfeit locus protein 1 [Rattus norvegicus] 4 2 4 18 At1g48640 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 4 2 4 19 At1g48720 hypothetical protein 4 2 4 20 At1g48900 signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) identical to SP|P49967 Signal recognition particle 54 kDa protein 3 (SRP54) {Arabidopsis thaliana} 4 2 4 21 At1g48960 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family; similar to hypothetical protein GI:7770340 from [Arabidopsis thaliana] 4 2 4 22 At1g51940 "protein kinase family protein / peptidoglycan-binding LysM domain-containing protein contains protein kinases ATP-binding region signature, PROSITE:PS00107" 4 2 4 23 At1g51990 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase GI:5031492 from [Ocimum basilicum], [SP|Q00763] [Populus tremuloides]" 4 2 4 24 At1g52150 "homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to to HD-zip transcription factor (athb-8) (GI:7270235) [Arabidopsis thaliana]; contains Pfam profiles PF01852: START domain, PF00046: Homeobox domain" 4 2 4 25 At1g52220 expressed protein 4 2 5 1 At1g52380 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein weak similarity to SP|Q09717 Ran-specific GTPase-activating protein 1 (Ran binding protein 1) (RANBP1) (Spi1-binding protein) {Schizosaccharomyces pombe}; contains Pfam profile PF00638: RanBP1 domain 4 2 5 2 At1g52415 hypothetical protein 4 2 5 3 At1g52565 expressed protein 4 2 5 4 At1g52620 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 2 5 5 At1g55300 TATA-binding protein-associated factor TAFII55 family protein contains Pfam profile: PF04658 TAFII55 protein conserved region 4 2 5 6 At1g55350 "calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659" 4 2 5 7 At1g55490 "RuBisCO subunit binding-protein beta subunit, chloroplast / 60 kDa chaperonin beta subunit / CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) [Arabidopsis thaliana]" 4 2 5 8 At1g55530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 2 5 9 At1g55675 expressed protein 4 2 5 10 At1g55720 "calcium exchanger, putative similar to low affinity calcium antiporter CAX2 [Arabidopsis thaliana] gi|1488267|gb|AAB05914; H+/Ca2+ exchanger 2 [Ipomoea nil] gi|4512263|dbj|BAA75232; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 4 2 5 11 At1g55880 "pyridoxal-5'-phosphate-dependent enzyme, beta family protein similar to SP|P50867 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 4 2 5 12 At1g55920 "serine O-acetyltransferase, putative identical to GI:608677 from [Arabidopsis thaliana]" 4 2 5 13 At1g60590 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase PG1 (GI:5669846), PG2 (GI:5669848) from [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 4 2 5 14 At1g60650 "glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 from [Nicotiana sylvestris]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 4 2 5 15 At1g60850 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514322; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 4 2 5 16 At1g60880 MADS-box family protein contains SRF-type transcription factor (DNA-binding and dimerisation domain) 4 2 5 17 At1g61040 plus-3 domain-containing protein contains Pfam profile PF03126: Plus-3 domain 4 2 5 18 At1g61090 hypothetical protein 4 2 5 19 At1g61250 "secretory carrier membrane protein (SCAMP) family protein (SC3) contains Pfam domain, PF04144: SCAMP family" 4 2 5 20 At1g61300 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 4 2 5 21 At1g64060 "respiratory burst oxidase protein F (RbohF) (RbohAp108) / NADPH oxidase identical to cytochrome b245 beta chain homolog RbohAp108 [GI:2654868], respiratory burst oxidase protein F [gi:3242456], from Arabidopsis thaliana" 4 2 5 22 At1g64105 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain 4 2 5 23 At1g64290 F-box protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; 4 2 5 24 At1g64340 hypothetical protein 4 2 5 25 At1g64500 glutaredoxin family protein 4 2 6 1 At1g64560 hypothetical protein 4 2 6 2 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 4 2 6 3 At1g64780 "ammonium transporter 1, member 2 (AMT1.2) nearly identical to SP|Q9ZPJ8 Ammonium transporter 1, member 2 (AtAMT1;2) {Arabidopsis thaliana}" 4 2 6 4 At1g67590 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 4 2 6 5 At1g67640 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GB:AAC49885 GI:2576361 (Arabidopsis thaliana); contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 4 2 6 6 At1g67790 expressed protein 4 2 6 7 At1g67840 "ATP-binding region, ATPase-like domain-containing protein contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; similar to ESTs gb|AI995396.1, dbj|AV557393.1, and dbj|AV557055.1" 4 2 6 8 At1g67960 expressed protein AT-AC non-consensus splice sites at intron 6 4 2 6 9 At1g68000 CDP-diacylglycerol--inositol 3-phosphatidyltransferase / phosphatidylinositol synthase (PIS1) identical to phosphatidylinositol synthase (PIS1) GB:AJ000539 [gi:3367632] 4 2 6 10 At1g68160 expressed protein 4 2 6 11 At1g68210 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 4 2 6 12 At1g70870 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 4 2 6 13 At1g70920 "homeobox-leucine zipper protein, putative / HD-ZIP transcription factor, putative similar to homeodomain leucine zipper protein GI:5006851 from [Oryza sativa]" 4 2 6 14 At1g71090 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 4 2 6 15 At1g71150 expressed protein ; expression supported by MPSS 4 2 6 16 At1g71310 expressed protein 4 2 6 17 At1g71360 expressed protein low similarity to PIR|JC7185 chromosome 1 C1orf9 protein [Homo sapiens] 4 2 6 18 At1g71680 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GB: AAC49885 GI:2576361 from (Arabidopsis thaliana); contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 4 2 6 19 At1g71695 peroxidase 12 (PER12) (P12) (PRXR6) identical to SP|Q96520 Peroxidase 12 precursor (EC 1.11.1.7) (Atperox P12) (PRXR6) (ATP4a) {Arabidopsis thaliana} 4 2 6 20 At1g74420 "xyloglucan fucosyltransferase, putative (FUT3) identical to SP|Q9CA71 Probable fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 4 2 6 21 At1g74460 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 lipase/acylhydrolase with GDSL-like motif" 4 2 6 22 At1g74640 expressed protein contains Pfam profile: PF00561 alpha/beta hydrolase fold 4 2 6 23 At1g74700 RNase Z identical to RNase Z (GI:20975609) [Arabidopsis thaliana] 4 2 6 24 At1g74880 expressed protein 4 2 6 25 At1g74930 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.1 GI:2281627 from [Arabidopsis thaliana]" 4 2 7 1 At1g75100 expressed protein low similarity to SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo sapiens} 4 2 7 2 At1g75160 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 4 2 7 3 AT5G57480 PC-1 B09 4 2 7 4 3XSSC PC-1 B21 4 2 7 5 AT1G29930 PC-1 F09 4 2 7 6 3XSSC PC-1 F21 4 2 7 7 AT3G44150 PC-1 J09 4 2 7 8 3XSSC PC-1 J21 4 2 7 9 AT4G00810 PC-1 N09 4 2 7 10 3XSSC PC-1 N21 4 2 7 11 At1g77880 F-box family protein similar to hypothetical protein GI:5042172 from [Arabidopsis thaliana] ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 4 2 7 12 At1g77930 DNAJ heat shock N-terminal domain-containing protein similar to J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj GI:5542126; contains Pfam profile PF00226 DnaJ domain 4 2 7 13 At1g78100 F-box family protein contains F-box domain Pfam:PF00646 4 2 7 14 At1g78160 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806 Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (8 copies at C-terminal half of protein)" 4 2 7 15 At1g78310 VQ motif-containing protein contains PF05678: VQ motif 4 2 7 16 At1g78380 "glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya]" 4 2 7 17 At1g78560 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 4 2 7 18 At1g78620 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 4 2 7 19 At2g01180 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 4 2 7 20 At2g01210 "leucine-rich repeat transmembrane protein kinase, putative " 4 2 7 21 At2g01350 "quinolinate phosphoribosyl transferase family protein contains Pfam profile: PF01729 quinolinate phosphoribosyl transferase, C-terminal domain" 4 2 7 22 At2g01420 "auxin transport protein, putative similar to auxin transport protein PIN7[Arabidopsis thaliana] gi|5817305|gb|AAD52697" 4 2 7 23 At2g01580 expressed protein and genefinder 4 2 7 24 At2g01640 expressed protein 4 2 7 25 At2g01780 "S-locus glycoprotein, putative similar to S-locus glycoprotein from [Brassica oleracea] GI:2351138, [Brassica napus] GI:17868; contains Pfam profile PF01453: Lectin (probable mannose binding)" 4 2 8 1 At2g01850 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (EXGT-A3) identical to endoxyloglucan transferase [Arabidopsis thaliana] GI:5533313 4 2 8 2 At2g05000 hypothetical protein and genefinder 4 2 8 3 At2g05084 hypothetical protein 4 2 8 4 At2g05310 expressed protein 4 2 8 5 At2g05380 glycine-rich protein (GRP3S) identical to cDNA glycine-rich protein 3 short isoform (GRP3S) GI:4206766 4 2 8 6 At2g05590 expressed protein similar to nucleolar protein C7C (GI:13540302) [Rattus norvegicus] 4 2 8 7 At2g05645 hypothetical protein 4 2 8 8 At2g05890 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 4 2 8 9 At2g05950 hypothetical protein 4 2 8 10 At2g14070 wound-responsive protein-related simialr to wound induced protein [Lycopersicon esculentum] GI:19320 4 2 8 11 At2g14120 dynamin-like protein 2b (ADL2b) identical to dynamin like protein 2b (ADL2b) [Arabidopsis thaliana] GI:19032339 4 2 8 12 At2g14450 "hypothetical protein includes At5g34960, At2g14450, At1g35920" 4 2 8 13 At2g14530 expressed protein 4 2 8 14 At2g14710 F-box family protein contains Pfam profile: PF00646 F-box domain 4 2 8 15 At2g14770 "Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 4 2 8 16 At2g14890 arabinogalactan-protein (AGP9) identical to gi|10880495|gb|AAG24277 4 2 8 17 At2g14960 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 4 2 8 18 At2g18030 peptide methionine sulfoxide reductase family protein similar to SP|P08761 Ecdysone-induced protein 28/29 kDa {Drosophila melanogaster}; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase 4 2 8 19 At2g18060 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 4 2 8 20 At2g18220 expressed protein contains Pfam domain PF03715: Uncharacterised protein family (UPF0120) 4 2 8 21 At2g18250 "cytidylyltransferase domain-containing protein similar to CoA synthase [Mus musculus] GI:21780289, bifunctional phosphopantetheine adenylyl transferase / dephospho CoA kinase [Sus scrofa] GI:20465246; contains Pfam profile PF01467: Cytidylyltransferase" 4 2 8 22 At2g18420 "gibberellin-responsive protein, putative similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein" 4 2 8 23 At2g18465 DNAJ heat shock N-terminal domain-containing protein low similarity to dnaJ [Clostridium acetobutylicum] GI:144832; contains Pfam profile PF00226 DnaJ domain 4 2 8 24 At2g18650 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHX1a [Arabidopsis thaliana] GI:3790591; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 4 2 8 25 At2g18710 "preprotein translocase secY subunit, chloroplast (CpSecY) Identical to SP|Q38885 Preprotein translocase secY subunit, chloroplast precursor (CpSecY) {Arabidopsis thaliana}" 4 2 9 1 At2g21370 "xylulose kinase, putative similar to xylulose kinase (Xylulokinase) [Bacillus subtilis] Swiss-Prot:P39211" 4 2 9 2 At2g21420 zinc finger protein-related contains low similarity to zinc finger proteins and Pfam PF01485: IBR domain 4 2 9 3 At2g21610 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 2 9 4 At2g21650 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA-binding domain 4 2 9 5 At2g21850 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 2 9 6 At2g21890 "mannitol dehydrogenase, putative similar to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase (Populus tremuloides) (gi:14279694); contains Pfam zinc-binding dehydrogenase domain PF00107" 4 2 9 7 At2g22060 expressed protein 4 2 9 8 At2g22120 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 2 9 9 At2g24990 "RIO1 family protein similar to extragenic suppressor of the bimD6 mutation (SUDD) [Emericella nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae] GI:1359602; contains Pfam profile PF01163: RIO1 family" 4 2 9 10 At2g25080 "phospholipid hydroperoxide glutathione peroxidase, chloroplast / PHGPx (GPX1) identical to SP|P52032 Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.9) (PHGPx) {Arabidopsis thaliana}; contains Glutathione peroxidases signatures, Glutathione_Peroxid_1 [GKVMLIVNVASRCGLT], Glutathione_Peroxid_2 [LAFPCNQF]; contains EST GB:T43669, N38679, R30227, H37043, AA042773; identical to cDNA chloroplast mRNA for glutathione peroxidase GI:2274856" 4 2 9 11 At2g25260 expressed protein 4 2 9 12 At2g25310 expressed protein 4 2 9 13 At2g25500 expressed protein 4 2 9 14 At2g25565 hypothetical protein 4 2 9 15 At2g25700 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from [Antirrhinum majus]" 4 2 9 16 At2g25740 ATP-dependent protease La (LON) domain-containing protein low similarity to protease Lon [Pseudomonas fluorescens] GI:7644385; contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 4 2 9 17 At2g28355 expressed protein contains similarity to anther-specific protein GI:1448935 from [Brassica rapa] 4 2 9 18 At2g28410 expressed protein 4 2 9 19 At2g28570 expressed protein 4 2 9 20 At2g28620 kinesin motor protein-related 4 2 9 21 At2g28800 chloroplast membrane protein (ALBINO3) Oxa1p homolog {PMID:11148275}; identical to chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] GI:2209332 4 2 9 22 At2g28840 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 4 2 9 23 At2g29050 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 4 2 9 24 At2g29090 cytochrome P450 family protein similar to Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana]; similar to taxane 13-alpha-hydroxylase (GI:17148242) [Taxus cuspidata]. 4 2 9 25 At2g31780 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam:PF01485 IBR domain" 4 2 10 1 At2g31820 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 4 2 10 2 At2g31980 cysteine proteinase inhibitor-related contains similarity to extracellular insoluble cystatin GI:2204077 from [Daucus carota] 4 2 10 3 At2g32030 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 4 2 10 4 At2g32200 hypothetical protein 4 2 10 5 At2g32250 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 4 2 10 6 At2g32390 "glutamate receptor family protein (GLR3.5) plant glutamate receptor family, PMID:11379626" 4 2 10 7 At2g32450 "calcium-binding EF hand family protein low similarity to O-linked GlcNAc transferase [Homo sapiens] GI:2266994; contains Pfam profiles PF00036: EF hand, PF00515: TPR Domain" 4 2 10 8 At2g35030 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 2 10 9 At2g35075 hypothetical protein 4 2 10 10 At2g35230 VQ motif-containing protein contains PF05678: VQ motif 4 2 10 11 At2g35290 expressed protein 4 2 10 12 At2g35480 expressed protein 4 2 10 13 At2g35520 "defender against cell death 2 (DAD2) identical to defender against cell death 2 (DAD-2, AtDAD2) [Arabidopsis thaliana] SWISS-PROT:O22622" 4 2 10 14 At2g35660 "monooxygenase family protein nearly identical to CTF2A [GI:4164576][Plant Physiol. 119, 364 (1999), PGR99-008]" 4 2 10 15 At2g35700 "AP2 domain-containing transcription factor, putative pFAM domain (PF00847)" 4 2 10 16 At2g38270 "CAX-interacting protein, putative identical to cDNA CAXIP1-like protein GI:27752306; contains Pfam profile PF00462: Glutaredoxin; contains TIGRfam profile TIGR00365: glutaredoxin-related protein" 4 2 10 17 At2g38330 MATE efflux family protein low similarity to enhanced disease susceptibility 5 [Arabidopsis thaliana] GI:16589070; contains Pfam profile PF01554: Uncharacterized membrane protein family 4 2 10 18 At2g38490 "CBL-interacting protein kinase 22, putative (CIPK22) identical to CBL-interacting protein kinase 22 [Arabidopsis thaliana] gi|17902248|gb|AAL47845" 4 2 10 19 At2g38560 transcription factor S-II (TFIIS) domain-containing protein similar to SP|P49373 Transcription elongation factor S-II (TFIIS) {Schizosaccharomyces pombe}; contains Pfam profile PF01096: Transcription factor S-II (TFIIS) 4 2 10 20 At2g38730 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Homo sapiens] gi|3647230|gb|AAC60793" 4 2 10 21 At2g38790 expressed protein 4 2 10 22 At2g38880 histone-like transcription factor (CBF/NF-Y) family protein similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays] and CCAAT-binding transcription factor subunit A (CBF-A) (NF-Y protein chain B) (NF-YB) (CAAT-box DNA binding protein subunit B) (SP:P25210) [Petromyzon marinus]; contains a CBF/NF-Y subunit signature (PDOC00578) presernt in members of histone-like transcription factor family; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone 4 2 10 23 At2g38940 phosphate transporter (PT2) identical to phosphate transporter (AtPT2) [Arabidopsis thaliana] GI:1502430 4 2 10 24 At2g41470 embryo-specific protein-related similar to embryo-specific protein 3 (ATS3) [Arabidopsis thaliana] GI:3335171 4 2 10 25 At2g41520 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 4 2 11 1 At2g41680 "thioredoxin reductase, putative / NADPH-dependent thioredoxin reductase, putative The last 2 exons encode thioredoxin. There is an EST match to exons 5-7, and the distance between exon 7 and exon 8 is only 90bp. It is unlikely this is two separate genes, but more likely a hybrid protein." 4 2 11 2 At2g41710 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana];Pfam domain (PF00847)" 4 2 11 3 At2g41860 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247" 4 2 11 4 At2g41905 expressed protein 4 2 11 5 At2g42070 MutT/nudix family protein similar to SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13) {Methanococcus jannaschii}; contains Pfam profile PF00293: NUDIX domain 4 2 11 6 At2g42120 DNA polymerase delta small subunit-related similar to DNA polymerase delta small subunit SP:Q9LRE5 from [Oryza sativa] 4 2 11 7 At2g44730 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 4 2 11 8 At2g44760 expressed protein 4 2 11 9 At2g44920 "thylakoid lumenal 15 kDa protein, chloroplast identical to SP|O22160 Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) {Arabidopsis thaliana}; contains 8 pentapeptide repeats" 4 2 11 10 At2g44980 "transcription regulatory protein SNF2, putative similar to SNF2P [Oryza sativa (japonica cultivar-group)] GI:23193483; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; CG donor site annotated in one isoform based on protein alignments." 4 2 11 11 At2g45140 "vesicle-associated membrane protein, putative / VAMP, putative similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia]" 4 2 11 12 At2g45190 "axial regulator YABBY1 (YABBY1) / abnormal floral organs protein (AFO) / filamentous flower protein (FIL) identical to YABBY1 [Arabidopsis thaliana] GI:4928749, abnormal floral organs protein (AFO) [Arabidopsis thaliana] GI:4322477; supporting cDNA gi|4322476|gb|AF087015.1|AF087015" 4 2 11 13 At2g45400 "dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family similar to dihydroflavonol 4-reductase (SP:P51102), vestitone reductase (Medicago sativa, GI:973249)" 4 2 11 14 At2g45450 expressed protein 4 2 11 15 At2g48050 expressed protein ; expression supported by MPSS 4 2 11 16 At2g48100 exonuclease family protein contains Pfam domain PF00929: exonuclease 4 2 11 17 At3g01050 expressed protein 4 2 11 18 At3g01085 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain; contains non-consensus splice site (GC) at intron 2" 4 2 11 19 At3g01240 expressed protein 4 2 11 20 At3g01300 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] Swiss-Prot:Q06548" 4 2 11 21 At3g01430 expressed protein 4 2 11 22 At3g01480 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen PPIase, 40 kDa thylakoid lumen rotamase) [Spinacia oleracea] SWISS-PROT:O49939" 4 2 11 23 At3g04040 expressed protein 4 2 11 24 At3g04100 MADS-box family protein contains Pfam profile: PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 4 2 11 25 At3g04280 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 4 2 12 1 At3g04330 "trypsin and protease inhibitor family protein / Kunitz family protein weak similarity to 21 kDa seed protein [Theobroma cacao] GI:21909, Kunitz trypsin inhibitor TI3 [Populus tremuloides] GI:13605354; contains Pfam profile PF00197: Trypsin and protease inhibitor" 4 2 12 2 At3g04490 exportin-related weak similarity to Exportin 4 (Exp4) (Swiss-Prot:Q9ESJ0) [Mus musculus] and (Swiss-Prot:Q9C0E2) [Homo sapiens] 4 2 12 3 At3g04550 expressed protein 4 2 12 4 At3g04680 pre-mRNA cleavage complex family protein similar to Pre-mRNA cleavage complex II protein Clp1 (Swiss-Prot:Q92989) [Homo sapiens] 4 2 12 5 At3g04740 expressed protein (SWP1) 4 2 12 6 At3g07210 expressed protein predicted using genefinder 4 2 12 7 At3g07270 GTP cyclohydrolase I identical to GTP cyclohydrolase I GI:19909132 from [Arabidopsis thaliana]; contains Pfam profile: PF01227 GTP cyclohydrolase I 4 2 12 8 At3g07440 expressed protein 4 2 12 9 At3g07480 expressed protein 4 2 12 10 At3g07610 "transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain, PF02373: jmjC domain" 4 2 12 11 At3g07670 "SET domain-containing protein similar to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 4 2 12 12 At3g07810 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 4 2 12 13 At3g07860 expressed protein 4 2 12 14 At3g10830 hypothetical protein 4 2 12 15 At3g10880 hypothetical protein 4 2 12 16 At3g10985 wound-responsive protein-related similar to SP|P20144 Wound-induced protein 1 {Solanum tuberosum} 4 2 12 17 At3g11040 glycosyl hydrolase family 85 protein contains similarity to endo-b-N-acetylglucosaminidase GI:13774138 from [Mucor hiemalis] 4 2 12 18 At3g11220 Paxneb protein-related contains Pfam profile PF05625: PAXNEB protein; similar to Paxneb protein (GI:10129788) [Mus musculus]; similar to PAX neighbour protein (GI:15887001) [Takifugu rubripes] 4 2 12 19 At3g11280 myb family transcription factor contains Pfam profile: PF00249 Myb-like DNA-binding domain 4 2 12 20 At3g11410 "protein phosphatase 2C, putative / PP2C, putative identical to protein phosphatase 2C (PP2C) GB:P49598 [Arabidopsis thaliana]; contains Pfam profile PF00481: Protein phosphatase 2C; identical to cDNA protein phosphatase 2C GI:633027" 4 2 12 21 At3g11470 4'-phosphopantetheinyl transferase family protein contains Pfam profile PF01648: 4'-phosphopantetheinyl transferase superfamily 4 2 12 22 At3g13840 scarecrow transcription factor family protein 4 2 12 23 At3g13880 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 2 12 24 At3g14050 "RelA/SpoT protein, putative (RSH2) nearly identical to RelA/SpoT homolog RSH2 [Arabidopsis thaliana] GI:7141306; contains Pfam profiles PF01966: HD domain, PF04607: Region found in RelA / SpoT proteins" 4 2 12 25 At3g14080 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116; contains Pfam profile: PF01423 Sm protein" 4 2 13 1 At3g14210 "myrosinase-associated protein, putative similar to GB:CAA71238 from [Brassica napus]; contains Pfam profile:PF00657 Lipase/Acylhydrolase with GDSL-like motif" 4 2 13 2 At3g14230 AP2 domain-containing protein RAP2.2 (RAP2.2) identical to AP2 domain containing protein RAP2.2 GI:2281629 from [Arabidopsis thaliana] 4 2 13 3 At3g14395 expressed protein 4 2 13 4 At3g14440 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase GB:AAF26356 [GI:6715257][Phaseolus vulgaris]" 4 2 13 5 At3g17020 universal stress protein (USP) family protein similar to early nodulin ENOD18 [Vicia faba] GI:11602747; contains Pfam profile PF00582: universal stress protein family 4 2 13 6 At3g17090 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 4 2 13 7 At3g17220 invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 4 2 13 8 At3g17240 "dihydrolipoamide dehydrogenase 2, mitochondrial / lipoamide dehydrogenase 2 (MTLPD2) nearly identical to GB:AAF34796 [gi:6984216] from [Arabidopsis thaliana]; alternative splice form exists" 4 2 13 9 At3g17420 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 4 2 13 10 At3g17470 "RelA/SpoT domain-containing protein / calcium-binding EF-hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain, Pfam profile PF04607: Region found in RelA / SpoT proteins" 4 2 13 11 At3g17609 bZIP transcription factor family protein / HY5-like protein (HYH) nearly identical to HY5-like protein [Arabidopsis thaliana] GI:18042111; similar to TGACG-motif binding factor GI:2934884 from [Glycine max]; contains Pfam profile: PF00170 bZIP transcription factor 4 2 13 12 At3g17650 oligopeptide transporter OPT family protein similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein 4 2 13 13 At3g20320 mce-related family protein contains Pfam PF02470: mce related protein 4 2 13 14 At3g20360 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 4 2 13 15 At3g20530 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 2 13 16 At3g20580 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region; supporting cDNA gi|26452232|dbj|AK118605.1| 4 2 13 17 At3g20760 hypothetical protein 4 2 13 18 At3g20810 transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain PF02373: jmjC domain 4 2 13 19 At3g20970 nitrogen fixation NifU-like family protein simikar ti HIRA-interacting protein 5 (NIFU FAMILY) (SP:Q9QZ23) {Mus musculus}; contains Pfam profile: PF01106 NifU-like domain 4 2 13 20 At3g21080 ABC transporter-related contains 4 transmembrane domains; supported by tandem duplication of ABC transporter family protein (GI:20260310) (TIGR_Ath1:At3g21090) [Arabidopsis thaliana] 4 2 13 21 At3g23770 glycosyl hydrolase family 17 protein similar to A6 anther-specific protein SP:Q06915 [Arabidopsis thaliana] 4 2 13 22 At3g23820 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile: PF01370 NAD dependent epimerase/dehydratase family" 4 2 13 23 At3g23990 "chaperonin (CPN60) (HSP60) identical to SWISS-PROT:P29197- chaperonin CPN60, mitochondrial precursor (HSP60) [Arabidopsis thaliana]" 4 2 13 24 At3g24050 GATA transcription factor 1 (GATA-1) identical to GATA transcription factor 1 (AtGATA-1) GB:Y13648 [Arabidopsis thaliana] 4 2 13 25 At3g24200 monooxygenase family protein low similarity to VisC [Escherichia coli][GI:216629]; contains Pfam profile: PF01360 Monooxygenase 4 2 14 1 At3g24250 glycine-rich protein 4 2 14 2 At3g24430 expressed protein contains Pfam profile PF01883: Domain of unknown function 4 2 14 3 At3g24495 DNA mismatch repair protein MSH6-2 (MSH7) identical to SP|Q9SMV7 DNA mismatch repair protein MSH6-2 (AtMsh6-2) (MutS homolog 7) {Arabidopsis thaliana}; GC donor splice site at exon 11 4 2 14 4 At3g27220 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (4 repeats); contains Prosite PS00334: Myb DNA-binding domain repeat signature 2; similar to Male enhanced Antigen-1 (peas) (GI:20513270) [Mus musculus] 4 2 14 5 At3g27280 "prohibitin, putative strong similarity to prohibitin [Arabidopsis thaliana] GI:1946331; contains Pfam profile PF01145: SPFH domain / Band 7 family" 4 2 14 6 At3g27430 "20S proteasome beta subunit B (PBB1) identical to 20S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type;" 4 2 14 7 At3g27473 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 2 14 8 At3g27650 LOB domain protein 25 / lateral organ boundaries domain protein 25 (LBD25) identical to LOB DOMAIN 25 [Arabidopsis thaliana] GI:17227166 4 2 14 9 At3g27710 "zinc finger protein-related contains similarity to zinc finger proteins and Pfam domain, PF01485: IBR domain" 4 2 14 10 At3g27910 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 4 2 14 11 At3g27960 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515: TPR Domain 4 2 14 12 At3g32090 transcription factor-related contains weak similarity to WIZZ [Nicotiana tabacum] gi|6472585|dbj|BAA87058 4 2 14 13 At3g32160 hypothetical protein 4 2 14 14 At3g32930 expressed protein 4 2 14 15 At3g33080 hypothetical protein similar to protein prospero GI:1346808 [Drosophila melanogaster] 4 2 14 16 At3g42130 glycine-rich protein 4 2 14 17 At3g42180 exostosin family protein contains Pfam profile: PF03016 Exostosin family 4 2 14 18 At3g42436 hypothetical protein 4 2 14 19 At3g42500 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 4 2 14 20 At3g45600 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 4 2 14 21 At3g45660 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 2 14 22 At3g45820 hypothetical protein 4 2 14 23 At3g45880 hypothetical protein 4 2 14 24 At3g46060 "Ras-related protein (ARA-3) / small GTP-binding protein, putative identical to SP|P28186 Ras-related protein ARA-3 {Arabidopsis thaliana}; contains Pfam profile: PF00071 Ras family" 4 2 14 25 At3g46120 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 4 2 15 1 At3g46310 expressed protein ; expression supported by MPSS 4 2 15 2 At3g46370 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thalian] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 4 2 15 3 At3g49160 "pyruvate kinase family protein similar to SP|Q92122 Pyruvate kinase, muscle isozyme (EC 2.7.1.40) (Cytosolic thyroid hormone binding protein) (CTHBP) {Xenopus laevis}; contains Pfam profile PF00224: Pyruvate kinase, barrel domain" 4 2 15 4 At3g49220 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 2 15 5 At3g49380 calmodulin-binding family protein 4 2 15 6 At3g49440 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 4 2 15 7 At3g49620 "2-oxoacid-dependent oxidase, putative (DIN11) identical to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]; identical to cDNA 2-oxoacid-dependent oxidase (din11) GI:10834553; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 4 2 15 8 At3g49680 "branched-chain amino acid aminotransferase 3 / branched-chain amino acid transaminase 3 (BCAT3) identical to SP|Q9M401 Branched-chain amino acid aminotransferase 3, chloroplast precursor (EC 2.6.1.42) (Atbcat-3){Arabidopsis thaliana}" 4 2 15 9 At3g49860 "ADP-ribosylation factor, putative similar to GTP-binding ADP-ribosylation factor homolog 1 protein (SP:P25160) [Drosophila melanogaster] and various ADP-RIBOSYLATION FACTOR (ARF) - like proteins; contains PF00025: ADP-ribosylation factor family domain" 4 2 15 10 At3g49920 "porin, putative similar to SP|P42055 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) {Solanum tuberosum}; contains Pfam profile PF01459: Eukaryotic porin" 4 2 15 11 At3g52630 hypothetical protein 4 2 15 12 At3g52680 F-box family protein contains F-box domain Pfam:PF00646 4 2 15 13 At3g52820 purple acid phosphatase (PAP22) identical to purple acid phosphatase (PAP22)GI:20257494 from [Arabidopsis thaliana] 4 2 15 14 At3g52880 "monodehydroascorbate reductase, putative monodehydroascorbate reductase (NADH), Lycoperison esculentum, PIR:T06407" 4 2 15 15 At3g53020 "60S ribosomal protein L24 (RPL24B) 60S ribosomal protein L24, Arabidopsis thaliana, EMBL:AC006282" 4 2 15 16 At3g53080 galactose-binding lectin family protein contains Pfam domain PF02140: Galactose binding lectin domain 4 2 15 17 At3g53240 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.1 [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779" 4 2 15 18 At3g53290 "cytochrome P450, putative Similar to Cytochrome P450 71B31 (SP:Q9SCN2)[Arabidopsis thaliana]; conatins Pfam profile: PF00067 cytochrome P450" 4 2 15 19 At3g55880 expressed protein 4 2 15 20 At3g55930 RNA splicing factor-related similar to U4/U6-associated RNA splicing factor [Homo sapiens] GI:2853287 4 2 15 21 At3g56110 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 4 2 15 22 At3g56150 eukaryotic translation initiation factor 3 subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly identical to SP|O49160 Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105) {Arabidopsis thaliana} 4 2 15 23 At3g56330 "N2,N2-dimethylguanosine tRNA methyltransferase family protein low similarity to SP|Q9P804 N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) {Schizosaccharomyces pombe}; contains Pfam profile PF02005: N2,N2-dimethylguanosine tRNA methyltransferase" 4 2 15 24 At3g56390 hypothetical protein 4 2 15 25 At3g56570 "SET domain-containing protein low similarity to SP|Q43088 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) {Pisum sativum}; contains Pfam profile PF00856: SET domain" 4 2 16 1 At3g56630 "cytochrome P450, putative cytochrome P450 CYP94A1 - Vicia sativa, PIR:T08014" 4 2 16 2 At3g59440 "calcium-binding protein, putative similar to calcium-binding protein [Lotus japonicus] GI:18413495" 4 2 16 3 At3g59500 integral membrane HRF1 family protein contains Pfam domain PF03878: Hrf1 family 4 2 16 4 At3g59680 expressed protein 4 2 16 5 At3g59740 receptor lectin kinase 3 (lecRK3) identical to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733 4 2 16 6 At3g59890 "dihydrodipicolinate reductase family protein weak similarity to SP|Q52419 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR) {Pseudomonas syringae}; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 4 2 16 7 At3g59940 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 4 2 16 8 At3g60100 "citrate synthase, mitochondrial, putative strong similarity to SP|Q43175 Citrate synthase, mitochondrial precursor {Solanum tuberosum}; contains Pfam profile PF00285: Citrate synthase" 4 2 16 9 At3g60160 ABC transporter family protein similar to ATP-binding cassette transporter MRP8 GI:18031899 from [Arabidopsis thaliana] 4 2 16 10 At3g62870 "60S ribosomal protein L7A (RPL7aB) 60S RIBOSOMAL PROTEIN L7A - Oryza sativa, SWISSPROT:RL7A_ORYSA" 4 2 16 11 At3g62930 "glutaredoxin family protein contains glutaredoxin domain, INTERPRO:IPR002109" 4 2 16 12 At3g63110 adenylate isopentenyltransferase 3 / cytokinin synthase (IPT3) identical to adenylate isopentenyltransferase (IPT3) [Arabidopsis thaliana] GI:14279060 4 2 16 13 At3g63170 expressed protein 4 2 16 14 At3g63290 expressed protein 4 2 16 15 At3g63340 "protein phosphatase 2C-related / PP2C-related protein phosphatase 2C - Rattus norvegicus, EMBL:AF095927" 4 2 16 16 At3g63480 "kinesin heavy chain, putative kinesin heavy chain, Syncephalastrum racemosum, SWISSPROT:KINH_SYNRA" 4 2 16 17 At3g63520 9-cis-epoxycarotenoid dioxygenase / neoxanthin cleavage enzyme / NCED1 / carotenoid cleavage dioxygenase 1 (CCD1) identical to putative 9-cis-epoxy-carotenoid dioxygenase [GI:3096910]; contains Pfam profile PF03055: Retinal pigment epithelial membrane protein 4 2 16 18 At4g02370 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 4 2 16 19 At4g02420 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 4 2 16 20 At4g02560 homeobox protein LUMINIDEPENDENS (LD) identical to Homeobox protein LUMINIDEPENDENS (Swiss-Prot:Q38796) [Arabidopsis thaliana] 4 2 16 21 At4g02620 vacuolar ATPase subunit F family protein contains weak similarity to vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Swiss-Prot:P50408) [Rattus norvegicus]; contains Pfam PF01990: ATP synthase (F/14-kDa) subunit 4 2 16 22 At4g02770 "photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD1) similar to SP|P12353 Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) {Spinacia oleracea}; contains Pfam profile PF02531: PsaD" 4 2 16 23 At4g02830 expressed protein temporary automated functional assignment 4 2 16 24 At4g03000 expressed protein contains similarity to hypothetical proteins 4 2 16 25 At4g03060 "2-oxoglutarate-dependent dioxygenase, putative (AOP2) nearly identical to GI:16118891; contains Pfam profile PF03171: 2OG-Fe(II) oxygenase superfamily domain. The gene sequence is frameshifted, this could be a pseudogene or a sequencing error may exist; identical to cDNA AOP2 GI:16118890" 4 2 17 1 At4g07524 "GTP-binding protein, putative similar to GTP-binding protein [Pisum sativum] gi|303736|dbj|BAA02109" 4 2 17 2 At4g07690 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 4 2 17 3 At4g08097 hypothetical protein 4 2 17 4 At4g08150 homeobox protein knotted-1 like 1 (KNAT1) identical to homeobox protein knotted-1 like 1 (KNAT1) SP:P46639 from [Arabidopsis thaliana] 4 2 17 5 At4g08290 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 4 2 17 6 At4g08336 hypothetical protein 4 2 17 7 At4g08520 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 4 2 17 8 At4g08570 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 4 2 17 9 At4g11390 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 2 17 10 At4g11450 expressed protein 4 2 17 11 At4g11655 "transmembrane protein, putative contains 4 transmembrane spanning domains, PMID:11152613" 4 2 17 12 At4g11710 hypothetical protein 4 2 17 13 At4g11870 hypothetical protein 4 2 17 14 At4g11930 hypothetical protein 4 2 17 15 At4g12070 expressed protein 4 2 17 16 At4g12130 glycine cleavage T family protein / aminomethyl transferase family protein contains Pfam profile: PF01571 glycine cleavage T-protein (aminomethyl transferase) 4 2 17 17 At4g14695 "expressed protein contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041)" 4 2 17 18 At4g14720 expressed protein 4 2 17 19 At4g14870 expressed protein 4 2 17 20 At4g14910 "imidazoleglycerol-phosphate dehydratase, putative similar to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; contains Pfam profile PF00475: imidazoleglycerol-phosphate dehydratase" 4 2 17 21 At4g15053 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 4 2 17 22 At4g15090 far-red impaired response protein (FAR1) / far-red impaired responsive protein (FAR1) identical to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family 4 2 17 23 At4g15236 "ABC transporter family protein similar to pleiotropic drug resistance like protein [Nicotiana tabacum] GI:20522008, ABC1 protein [Nicotiana plumbaginifolia] GI:14331118; contains Pfam profile PF00005: ABC transporter" 4 2 17 24 At4g15290 "cellulose synthase family protein similar to Zea mays cellulose synthase-5 [gi:9622882], -4 [gi:9622880]" 4 2 17 25 At4g17750 heat shock factor protein 1 (HSF1) / heat shock transcription factor 1 (HSTF1) identical to heat shock transcription factor 1 (HSF1) SP:P41151 from [Arabidopsis thaliana] ;contains Pfam profile: PF00447 HSF-type DNA-binding domain 4 2 18 1 At4g17800 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 4 2 18 2 At4g17980 no apical meristem (NAM) family protein NAM (GI:6066595) [Petunia x hybrida] 4 2 18 3 At4g18020 pseudo-response regulator 2 (APRR2) (TOC2) identical to pseudo-response regulator 2 GI:7576356 from [Arabidopsis thaliana] 4 2 18 4 At4g18180 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Salix gilgiana] GI:6714524; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 4 2 18 5 At4g18240 starch synthase-related protein contains similarity to starch synthase GI:4582783 from [Vigna unguiculata] 4 2 18 6 At4g18375 KH domain-containing protein contains similarity to RNA-binding KH-domains PF:00013 4 2 18 7 At4g18400 expressed protein 4 2 18 8 At4g21200 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin 20-oxidase from A. thaliana [gi:1109699], Phaseolis vulgaris [gi:2262201]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 4 2 18 9 At4g21230 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 4 2 18 10 At4g21400 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 4 2 18 11 At4g21450 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 4 2 18 12 At4g21590 "bifunctional nuclease, putative similar to bifunctional nuclease [Zinnia elegans] gi|4099833|gb|AAD00694" 4 2 18 13 At4g21650 "subtilase family protein contains Pfam domain, PF00082: Subtilase family; contains Pfam domain, PF02225: protease associated (PA) domain" 4 2 18 14 At4g21830 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 4 2 18 15 At4g21865 expressed protein 4 2 18 16 At4g24430 expressed protein 4 2 18 17 At4g24470 "zinc finger (GATA type) protein ZIM (ZIM) identical to zinc-finger protein expressed in Inflorescence Meristem, ZIM gi:8918533 from [Arabidopsis thaliana]" 4 2 18 18 At4g24610 expressed protein 4 2 18 19 At4g24670 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 4 2 18 20 At4g24805 expressed protein 4 2 18 21 At4g24880 expressed protein 4 2 18 22 At4g25030 expressed protein 4 2 18 23 At4g25100 "superoxide dismutase [Fe], chloroplast (SODB) / iron superoxide dismutase (FSD1) identical to Fe-superoxide dismutase [Arabidopsis thaliana] gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935" 4 2 18 24 At4g27654 expressed protein 4 2 18 25 At4g27700 rhodanese-like domain-containing protein contains rhodanese-like domain PF00581 4 2 19 1 At4g27860 integral membrane family protein contains Pfam PF01988: Integral membrane protein 4 2 19 2 At4g27910 "PHD finger protein-related / SET domain-containing protein (TX4) nearly identical over 285 amino acids to trithorax 4 [Arabidopsis thaliana] GI:16118405; contains Pfam profiles PF00856: SET domain, PF00855: PWWP domain; identical to cDNA trithorax 4 (TX4) partial cds GI:16118404" 4 2 19 3 At4g28060 "cytochrome c oxidase subunit 6b, putative similar to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] gi|6518353|dbj|BAA87883" 4 2 19 4 At4g28100 expressed protein 4 2 19 5 At4g28270 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 2 19 6 At4g28310 expressed protein 4 2 19 7 At4g30935 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 4 2 19 8 At4g30990 expressed protein ; expression supported by MPSS 4 2 19 9 At4g31110 "wall-associated kinase, putative similar to wall-associated kinase 1, Arabidopsis thaliana, gb:AJ009696" 4 2 19 10 At4g31140 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 4 2 19 11 At4g31320 "auxin-responsive protein, putative / small auxin up RNA (SAUR_C) similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesnerian]; similar to auxin-induced protein 15A (SP:P33081) from [Glycine max]" 4 2 19 12 At4g31380 hypothetical protein 4 2 19 13 At4g31540 "exocyst subunit EXO70 family protein (EXO70-G1) tomato leucine zipper-containing protein - Lycopersicon esculentum, PIR2:S21495; contains Pfam domain PF03081: Exo70 exocyst complex subunit;" 4 2 19 14 At4g31570 expressed protein 4 2 19 15 At4g34090 expressed protein 4 2 19 16 At4g34135 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 2 19 17 At4g34265 expressed protein 4 2 19 18 At4g34300 glycine-rich protein similar to auxin response factor 30 (GI:20145855) {Arabidopsis thaliana} 4 2 19 19 At4g34460 "guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994)" 4 2 19 20 At4g34510 "fatty acid elongase, putative similar to fatty acid elongase 1, Arabidopsis thaliana,gb:U29142 [GI:881615]" 4 2 19 21 At4g34680 "GATA transcription factor 3, putative (GATA-3) identical to GATA-binding transcription factor GATA-3 [Arabidopsis thaliana] gi|2959734|emb|CAA74001; identical to cDNA for GATA transcription factor 3 GI:2959733" 4 2 19 22 At4g34740 "amidophosphoribosyltransferase / glutamine phosphoribosylpyrophosphate amidotransferase / phosphoribosyldiphosphate 5-amidotransferase nearly identical to amidophosphoribosyltransferase [Arabidopsis thaliana] GI:469195; identical to cDNA amidophosphoribosyltransferase, partial cds GI:469194" 4 2 19 23 AT5G57480 PC-1 B09 4 2 19 24 3XSSC PC-1 B21 4 2 19 25 AT1G29930 PC-1 F09 4 2 20 1 3XSSC PC-1 F21 4 2 20 2 AT3G44150 PC-1 J09 4 2 20 3 3XSSC PC-1 J21 4 2 20 4 AT4G00810 PC-1 N09 4 2 20 5 3XSSC PC-1 N21 4 2 20 6 At4g37370 "cytochrome P450, putative similar to Cytochrome P450 91A1 (SP:Q9FG65 )[Arabidopsis thaliana]; cytochrome P450, Glycyrrhiza echinata, AB001379" 4 2 20 7 At4g37430 cytochrome P450 81F1 (CYP81F1) (CYP91A2) identical to cytochrome P450 81F1 (91A2) (SP:O65790) [Arabidopsis thaliana] 4 2 20 8 At4g37610 TAZ zinc finger family protein / BTB/POZ domain-containing protein contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 4 2 20 9 At4g37670 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 from Escherichia coli ; contains Pfam profile PF00696: Amino acid kinase family 4 2 20 10 At4g37820 "expressed protein Kaposi's sarcoma-associated herpes-like virus ORF73gene, Kaposi's sarcoma-associated herpesvirus, U52064" 4 2 20 11 At4g37880 expressed protein 4 2 20 12 At4g38060 expressed protein 4 2 20 13 At4g38090 expressed protein contains Pfam PF01205: Uncharacterized protein family UPF0029 4 2 20 14 At5g01510 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 4 2 20 15 At5g01550 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 4 2 20 16 At5g01700 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase type 2C - Saccharomyces cerevisiae, EMBL:U72346" 4 2 20 17 At5g01750 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 4 2 20 18 At5g01920 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 4 2 20 19 At5g01980 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 2 20 20 At5g02120 thylakoid membrane one helix protein (OHP) identical to one helix protein GI:3283057 from [Arabidopsis thaliana] 4 2 20 21 At5g02180 "amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 4 2 20 22 At5g04940 "SET domain-containing protein (SUVH1) contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH1 (SUVH1) GI:13517742" 4 2 20 23 At5g04980 endonuclease/exonuclease/phosphatase family protein contains similarity to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 4 2 20 24 At5g05130 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to transcription factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 2 20 25 At5g05190 expressed protein similar to unknown protein (emb|CAB88044.1) 4 2 21 1 At5g05340 "peroxidase, putative similar to peroxidase [Nicotiana tabacum] gi|5381253|dbj|BAA82306; similar to Peroxidase P7 [Brassica rapa (Turnip)] SWISS-PROT:P00434" 4 2 21 2 At5g05380 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 4 2 21 3 At5g05550 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 4 2 21 4 At5g05590 phosphoribosylanthranilate isomerase 2 (PAI2) identical to gi:619747 4 2 21 5 At5g08230 "PWWP domain-containing protein putative transcription factor (HUA2) - Arabidopsis thaliana, EMBL:AF116556" 4 2 21 6 At5g08290 "yellow-leaf-specific protein 8 (YLS8) / mitosis protein DIM1, putative contains Pfam domain PF02966: Mitosis protein DIM1; identical to cDNA YLS8 mRNA for Dim1 homolog GI:13122293" 4 2 21 7 At5g08430 "SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein similar to CPRF interacting protein [Petroselinum crispum] GI:9588690; contains Pfam profiles PF02201: BAF60b domain of the SWIB complex, PF03126: Plus-3 domain, PF02213: GYF domain; contains non-conensus AT-AC splice sites at intron 5" 4 2 21 8 At5g08480 VQ motif-containing protein contains PF05678: VQ motif 4 2 21 9 At5g08610 "DEAD box RNA helicase (RH26) strong similarity to RNA helicase RH26 [Arabidopsis thaliana] GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain; identical to cDNA DEAD box RNA helicase, RH26 GI:3776024" 4 2 21 10 At5g08670 "ATP synthase beta chain 1, mitochondrial identical to SP|P83483 ATP synthase beta chain 1, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}; strong similarity to SP|P17614 ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana plumbaginifolia}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain; supporting cDNA gi|26452102|dbj|AK118538.1|" 4 2 21 11 At5g09240 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 4 2 21 12 At5g09270 expressed protein 4 2 21 13 At5g12030 17.7 kDa class II heat shock protein 17.6A (HSP17.7-CII) identical to heat shock protein 17.6A GI:3256075 from [Arabidopsis thaliana] 4 2 21 14 At5g12070 "self-incompatibility protein-related similar to self-incompatibility [Papaver nudicaule] GI:3097262, S3 self-incompatibility protein [Papaver rhoeas] GI:1107841" 4 2 21 15 At5g12240 expressed protein 4 2 21 16 At5g12300 C2 domain-containing protein contains Pfam profile PF00168: C2 domain 4 2 21 17 At5g12450 "hypothetical protein similarity to predicted proteins, Arabidopsis thaliana" 4 2 21 18 At5g12850 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat" 4 2 21 19 At5g13030 "expressed protein contains Pfam profile PF02696: Uncharacterized ACR, YdiU/UPF0061 family" 4 2 21 20 At5g13100 expressed protein 4 2 21 21 At5g15840 zinc finger protein CONSTANS (CO) identical to Zinc finger protein CONSTANS SP:Q39057 from [Arabidopsis thaliana] 4 2 21 22 At5g15880 expressed protein 4 2 21 23 At5g16060 expressed protein 4 2 21 24 At5g16120 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 2 21 25 At5g16290 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 4 2 22 1 At5g16320 expressed protein 4 2 22 2 At5g16480 "tyrosine specific protein phosphatase family protein contains tyrosine specific protein phosphatases active site, PROSITE:PS00383" 4 2 22 3 At5g16540 "zinc finger (CCCH-type) family protein identical to zinc finger protein 3 [Arabidopsis thaliana] gi|4689376|gb|AAD27875; contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 2 22 4 At5g19100 "extracellular dermal glycoprotein-related / EDGP-related low similarity to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741, SP|P13917 Basic 7S globulin precursor {Glycine max}" 4 2 22 5 At5g19160 "expressed protein predicted proteins, Arabidopsis thaliana and Oryza sativa; expression supported by MPSS" 4 2 22 6 At5g19320 RAN GTPase activating protein 2 (RanGAP2) identical to RAN GTPase activating protein 2 GI:6708468 from [Arabidopsis thaliana] 4 2 22 7 At5g19360 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Marchantia polymorpha] gi|5162877|dbj|BAA81748" 4 2 22 8 At5g19520 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 4 2 22 9 At5g19580 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 4 2 22 10 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) identical to dicarboxylate/tricarboxylate carrier [Arabidopsis thaliana] GI:19913113 4 2 22 11 At5g19820 PBS lyase HEAT-like repeat-containing protein contains Pfam profile: PF03130 PBS lyase HEAT-like repeat 4 2 22 12 At5g23140 "ATP-dependent Clp protease proteolytic subunit, putative nClpP2/nClpP7; similar to SP:Q9X6W8 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) from [Azospirillum brasilense]" 4 2 22 13 At5g23200 expressed protein 4 2 22 14 At5g23340 expressed protein 4 2 22 15 At5g23395 expressed protein 4 2 22 16 At5g23530 expressed protein contains similarity to PrMC3 [Pinus radiata] GI:5487873 4 2 22 17 At5g23580 "calcium-dependent protein kinase 9 (CDPK9) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836938|gb|AAA67653; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 4 2 22 18 At5g23750 "remorin family protein contains Pfam domain, PF03766: Remorin, N-terminal region; contains Pfam domain, PF03763: Remorin, C-terminal region" 4 2 22 19 At5g23810 amino acid transporter family protein similar to amino acid carrier [Ricinus communis] GI:3293031; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 4 2 22 20 At5g26680 "endonuclease, putative similar to Swiss-Prot:P39748 FLAP endonuclease-1 (Maturation factor 1) (MF1) [Homo sapiens]" 4 2 22 21 At5g26640 hypothetical protein 4 2 22 22 At5g26800 "expressed protein predicted protein, Arabidopsis thaliana" 4 2 22 23 At5g26850 expressed protein 4 2 22 24 At5g27030 WD-40 repeat family protein contains 8 WD-40 repeats (PF00400) (2 weak) 4 2 22 25 At5g27100 "glutamate receptor family protein (GLR2.1) (GLR3) plant glutamate receptor family, PMID:11379626" 4 2 23 1 At5g27300 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 4 2 23 2 At5g27360 sugar-porter family protein 2 (SFP2) identical to sugar-porter family protein 2 [Arabidopsis thaliana] GI:14585701 4 2 23 3 At5g35400 tRNA pseudouridine synthase family protein weak similarity to SP|P07649 tRNA pseudouridine synthase A (EC 4.2.1.70) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF01416: tRNA pseudouridine synthase 4 2 23 4 At5g35475 hypothetical protein very low similarity to transposase [Ipomoea purpurea] GI:4063770 4 2 23 5 At5g35620 eukaryotic translation initiation factor 4E 2 / eIF-4E2 / mRNA cap-binding protein 2 (EIF4E2) identical to SP|O04663 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(ISO)4F P28 subunit) (eIF4Eiso protein) {Arabidopsis thaliana} 4 2 23 6 At5g35655 "hypothetical protein similar to At3g43370, At2g14780, At1g27810, At3g42760, At1g25784, At4g08890" 4 2 23 7 At5g35792 hypothetical protein 4 2 23 8 At5g35860 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 4 2 23 9 At5g36020 "hypothetical protein similar to At5g28170, At1g35110, At1g44880, At3g42530, At4g19320, At4g03970, At3g43010, At2g10350" 4 2 23 10 At5g36070 hypothetical protein 4 2 23 11 At5g39280 "expansin, putative (EXP23) similar to expansin2 GI:4884433 from [Lycopersicon esculentum]; alpha-expansin gene family, PMID:11641069" 4 2 23 12 At5g39340 two-component phosphorelay mediator 2 (HP2) nearly identical to ATHP2 [Arabidopsis thaliana] GI:4156243 4 2 23 13 At5g39520 "expressed protein predicted protein, Synechocystis sp., PIR:S77152" 4 2 23 14 At5g39580 "peroxidase, putative identical to peroxidase ATP24a [Arabidopsis thaliana] gi|1890313|emb|CAA72484" 4 2 23 15 At5g39760 "zinc finger homeobox protein-related / ZF-HD homeobox protein-related predicted proteins, Arabidopsis thaliana" 4 2 23 16 At5g39820 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; NAC domain protein NAM, Arabidopsis thaliana, gb:AAD17313" 4 2 23 17 At5g39980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 2 23 18 At5g40040 "60S acidic ribosomal protein P2 (RPP2E) acidic ribosomal protein P2, Parthenium argentatum,SWISSPROT:RLA2_PARAR" 4 2 23 19 At5g42820 "U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary factor, small subunit [Oryza sativa] GI:3850816" 4 2 23 20 At5g42850 expressed protein 4 2 23 21 At5g42960 expressed protein 4 2 23 22 At5g43010 26S proteasome AAA-ATPase subunit (RPT4a) gb|AAF22524.1 4 2 23 23 At5g43180 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 4 2 23 24 At5g43230 hypothetical protein 4 2 23 25 At5g43400 expressed protein strong similarity to unknown protein (emb|CAB86628.1) 4 2 24 1 At5g43450 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 4 2 24 2 At5g46030 expressed protein contains Pfam profile PF05129: Putative zinc binding domain (DUF701) 4 2 24 3 At5g46090 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679); expression supported by MPSS 4 2 24 4 At5g46200 expressed protein contains similarity to carboxyl-terminal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function; expression supported by MPSS 4 2 24 5 At5g46250 RNA recognition motif (RRM)-containing protein contains similarity to RNA-binding protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 2 24 6 At5g46400 expressed protein 4 2 24 7 At5g46440 expressed protein 4 2 24 8 At5g46620 expressed protein similar to unknown protein (pir||T05082) 4 2 24 9 At5g46660 "CHP-rich zinc finger protein, putative contains similarity to CHP-rich zinc finger protein" 4 2 24 10 At5g49280 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 4 2 24 11 At5g49340 expressed protein similar to unknown protein (emb|CAB82953.1) 4 2 24 12 At5g49510 "VHL binding protein, putative / prefoldin, putative similar to Swiss-Prot:Q15765 prefoldin subunit 3 (Von Hippel-Lindau binding protein 1; VHL binding protein-1; VBP-1; HIBBJ46) [Mus musculus]" 4 2 24 13 At5g49555 "amine oxidase-related contains Pfam profile PF01593: amine oxidase, flavin-containing" 4 2 24 14 At5g49700 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 4 2 24 15 At5g49740 ferric reductase-like transmembrane component family protein similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane componenent 4 2 24 16 At5g49920 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 4 2 24 17 At5g49970 pyridoxamine 5'-phosphate oxidase-related contains weak similarity to Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx). (Swiss-Prot:P28225) [Shigella flexneri] 4 2 24 18 At5g52710 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 4 2 24 19 At5g52770 heavy-metal-associated protein-related contains low similarity to Pfam profile PF00403: Heavy-metal-associated domain 4 2 24 20 At5g52950 expressed protein ; expression supported by MPSS 4 2 24 21 At5g52990 vesicle-associated membrane protein-related contains weak similarity to vesicle-associated membrane protein 722 (AtVAMP722) (Synaptobrevin- related protein 1) (Swiss-Prot:P47192) [Arabidopsis thaliana] 4 2 24 22 At5g53140 "protein phosphatase 2C, putative / PP2C, putative " 4 2 24 23 At5g53190 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 4 2 24 24 At5g53370 pectinesterase family protein 4 2 24 25 At5g53430 "PHD finger family protein / SET domain-containing protein (TX5) contains Pfam domain, PF00628: PHD-finger and PF00856: SET domain; identical to cDNA trithorax 5 (TX5) partial cds GI:16118406" 4 2 25 1 At5g56090 cytochrome oxidase assembly family protein contains PF02628: Cytochrome oxidase assembly protein 4 2 25 2 At5g56150 "ubiquitin-conjugating enzyme, putative strong similarity to ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum sativum] GI:456568; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 4 2 25 3 At5g56310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 2 25 4 At5g56360 calmodulin-binding protein similar to alpha glucosidase II beta subunit from GI:2104691 [Mus musculus] 4 2 25 5 At5g56530 expressed protein contains similarity to carboxyl-terminal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function 4 2 25 6 At5g56590 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 4 2 25 7 At5g56770 hypothetical protein 4 2 25 8 At5g56840 "DNA-binding family protein contains Pfam domains, PF00249: Myb-like DNA-binding domain and PF00098: Zinc knuckle" 4 2 25 9 At5g59360 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 4 2 25 10 At5g59400 "expressed protein predicted protein, Arabidopsis thaliana" 4 2 25 11 At5g59550 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 2 25 12 At5g59610 "DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9UXR9 Chaperone protein dnaJ (Heat shock protein 40 Methanosarcina thermophila, SP|Q9QYI6 DnaJ homolog subfamily B member 9 Mus musculus; contains Pfam profile PF00226 DnaJ domain" 4 2 25 13 At5g59790 expressed protein 4 2 25 14 At5g59840 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 4 2 25 15 At5g59950 "RNA and export factor-binding protein, putative " 4 2 25 16 At5g60010 "ferric reductase-like transmembrane component family protein similar to respiratory burst oxidase protein D RbohD from Arabidopsis thaliana, EMBL:AF055357 [gi:3242789], respiratory burst oxidase homolog from Solanum tuberosum [GI:16549089]; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 4 2 25 17 At5g62700 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 4 2 25 18 At5g62740 band 7 family protein strong similarity to hypersensitive-induced response protein [Zea mays] GI:7716470; contains Pfam profile PF01145: SPFH domain / Band 7 family; supporting cDNA gi|17065547|gb|AY062850.1| 4 2 25 19 At5g62900 expressed protein 4 2 25 20 At5g62960 expressed protein 4 2 25 21 At5g63100 expressed protein 4 2 25 22 At5g63135 expressed protein 4 2 25 23 At5g63320 expressed protein 4 2 25 24 At5g63390 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter-related protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.; expression supported by MPSS" 4 2 25 25 At5g65930 kinesin-like calmodulin-binding protein (ZWICHEL) identical to kinesin-like protein GI:2224925 from [Arabidopsis thaliana] 4 2 26 1 At5g65990 amino acid transporter family protein similar to proton/amino acid transporter 1 [Mus musculus] GI:21908024; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 4 2 26 2 At5g66055 ankyrin repeat protein / AKRP (AKR) identical to ankyrin repeat protein (AKRP) [Arabidopsis thaliana] SWISS-PROT:Q05753 4 2 26 3 At5g66100 La domain-containing protein similar to SP|P40796 La protein homolog (La ribonucleoprotein) (La autoantigen homolog) {Drosophila melanogaster}; contains Pfam profile PF05383: La domain 4 2 26 4 At5g66240 "transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak); similar to Will die slowly protein. {Drosophila melanogaster} (SP:Q9V3J8) {Drosophila melanogaster}" 4 2 26 5 At5g66270 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 2 26 6 At5g66410 expressed protein 4 2 26 7 At5g66470 expressed protein 4 2 26 8 3xSSC 3xSSC 4 2 26 9 3xSSC 3xSSC 4 2 26 10 3xSSC 3xSSC 4 2 26 11 3xSSC 3xSSC 4 2 26 12 3xSSC 3xSSC 4 2 26 13 3xSSC 3xSSC 4 2 26 14 3xSSC 3xSSC 4 2 26 15 3xSSC 3xSSC 4 2 26 16 At3g45600 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 4 2 26 17 At3g45660 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 2 26 18 At3g45820 hypothetical protein 4 2 26 19 At3g45880 hypothetical protein 4 2 26 20 At3g46060 "Ras-related protein (ARA-3) / small GTP-binding protein, putative identical to SP|P28186 Ras-related protein ARA-3 {Arabidopsis thaliana}; contains Pfam profile: PF00071 Ras family" 4 2 26 21 At3g46120 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 4 2 26 22 At3g46310 expressed protein ; expression supported by MPSS 4 2 26 23 At3g46370 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thalian] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 4 2 26 24 Blank Blank 4 2 26 25 Blank Blank 4 3 1 1 atc04 Randomly generated negative control 4 3 1 2 atc10 Randomly generated negative control 4 3 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 4 3 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 4 3 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 4 3 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 4 3 1 7 atc08 Randomly generated negative control 4 3 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 4 3 1 9 At1g01130 expressed protein ; expression supported by MPSS 4 3 1 10 At1g01170 "ozone-responsive stress-related protein, putative similar to stress-related ozone-induced protein AtOZI1 (GI:790583) [Arabidopsis thaliana]; contains 1 predicted transmembrane domain;" 4 3 1 11 At1g01360 expressed protein similar to hypothetical protein GB:CAB45785 GI:5262156 from [Arabidopsis thaliana] 4 3 1 12 At1g01420 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 3 1 13 At1g01590 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile: PF01794 ferric reductase like transmembrane component" 4 3 1 14 At1g01640 speckle-type POZ protein-related contains Pfam profile:PF00651 BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 4 3 1 15 At1g01810 hypothetical protein 4 3 1 16 At1g01900 subtilase family protein contains similarity to cucumisin-like serine protease GB:AAC18851 GI:3176874 from [Arabidopsis thaliana] 4 3 1 17 At1g04450 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 4 3 1 18 At1g04520 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 4 3 1 19 At1g04645 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 4 3 1 20 At1g04700 protein kinase family protein low similarity to EDR1 [Arabidopsis thaliana] GI:11127925; contains Pfam profile: PF00069 Eukaryotic protein kinase domain 4 3 1 21 At1g04880 "high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein low similarity to SP|O15347|HMG4_HUMAN High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) {Homo sapiens}; contains Pfam profiles PF00505: HMG (high mobility group) box, PF01388: ARID/BRIGHT DNA binding domain" 4 3 1 22 At1g04940 "tic20 family protein similar to Tic20 (GI:3769673) [Pisum sativum]; contains TIGRFAM IGR00994: chloroplast protein import component, Tic20 family" 4 3 1 23 At1g05080 F-box family protein contains F-box domain Pfam:PF00646 4 3 1 24 At1g05150 "calcium-binding EF hand family protein low similarity to O-linked GlcNAc transferase [Homo sapiens] GI:2266994; contains Pfam profiles PF00036: EF hand, PF00515: TPR Domain" 4 3 1 25 At1g07720 beta-ketoacyl-CoA synthase family protein similar to GB:AAC99312 from [Arabidopsis thaliana] (Plant J. (1999) In press) 4 3 2 1 At1g07770 "40S ribosomal protein S15A (RPS15aA) identical to GB:AAA61608 from [Arabidopsis thaliana] (Plant Physiol. 106 (1), 401-402 (1994))" 4 3 2 2 At1g07870 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 2 3 At1g07920 "elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990))" 4 3 2 4 At1g08040 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 4 3 2 5 At1g08090 "high-affinity nitrate transporter (ACH1) identical to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 4 3 2 6 At1g08230 amino acid transporter family protein low similarity to amino acid permease [Oryza sativa] GI:7415521; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 4 3 2 7 At1g08280 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 4 3 2 8 At1g10840 eukaryotic translation initiation factor 3 subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to SP|Q9C5Z2 Eukaryotic translation initiation factor 3 subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) {Arabidopsis thaliana}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 4 3 2 9 At1g10910 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 2 10 At1g11090 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 3 2 11 At1g11160 "WD-40 repeat family protein / katanin p80 subunit, putative similar to contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus]" 4 3 2 12 At1g11310 seven transmembrane MLO family protein / MLO-like protein 2 (MLO2) idenctical to membrane protein Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795; similar to Mlo [Hordeum vulgare subsp. vulgare] gi|1877221|emb|CAB06083 SWISS-PROT:P93766 4 3 2 13 At1g11360 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family domain; similar to ethylene-responsive ER6 protein (GI:5669654) [Lycopersicon esculentum] 4 3 2 14 At1g11500 expressed protein 4 3 2 15 At1g11560 OST3/OST6 family protein contains Pfam profile PF04756: OST3 / OST6 family 4 3 2 16 At1g14330 kelch repeat-containing F-box family protein contains Pfam profile PF01344: Kelch motif; contains weak Pfam PF00646: F-box domain; weak similarity to Kelch-like protein 1 (Swiss-Prot:Q9NR64) [Homo sapiens] 4 3 2 17 At1g14380 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 4 3 2 18 At1g14530 "tobamovirus multiplication protein 3, putative / TOM3, putative (THH1) identical to THH1 (GI:15706301) [Arabidopsis thaliana]; supporting cDNA gi|15706300|dbj|AB057678.1|" 4 3 2 19 At1g14590 "expressed protein similar to GI:4406788, GI:6063544, GI:2827651, GI:10764853 from [Arabidopsis thaliana]" 4 3 2 20 At1g14730 "cytochrome B561 family similar to cytochrome GB:AAD11424 GI:4206110 [Mesembryanthemum crystallinum]; contains Pfam domain, PF03188: Cytochrome b561" 4 3 2 21 At1g14770 expressed protein 4 3 2 22 At1g14920 gibberellin response modulator (GAI) (RGA2) / gibberellin-responsive modulator identical to GAI GB:CAA75492 GI:2569938 [Arabidopsis thaliana] (Genes Dev. In press) 4 3 2 23 At1g14980 10 kDa chaperonin (CPN10) identical to SP:P34893 from [Arabidopsis thaliana] 4 3 2 24 At1g17665 expressed protein 4 3 2 25 At1g17720 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 4 3 3 1 At1g17840 ABC transporter family protein similar to ABC transporter GI:10280532 from [Homo sapiens] 4 3 3 2 At1g17900 hypothetical protein 4 3 3 3 At1g18080 "WD-40 repeat family protein / auxin-dependent protein (ARCA) / guanine nucleotide-binding protein beta subunit, putative identical to SP|O24456 Guanine nucleotide-binding protein beta subunit-like protein (WD-40 repeat auxin-dependent protein ARCA) {Arabidopsis thaliana}; contains 7 WD-40 repeats (PF00400)" 4 3 3 4 At1g18160 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 4 3 3 5 At1g18335 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 4 3 3 6 At1g18390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 3 7 At1g21280 expressed protein 4 3 3 8 At1g21330 hypothetical protein 4 3 3 9 At1g21510 hypothetical protein 4 3 3 10 At1g21570 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 3 3 11 At1g21730 "kinesin-related protein (MKRP1) Similar to gb|U06698 neuronal kinesin heavy chain from Homo sapiens and contains a PF|00225 Kinesin motor domain. EST gb|AA042507 comes from this gene; identical to cDNA MKRP1 mRNA for kinesin-related protein, GI:16902291, kinesin-related protein [Arabidopsis thaliana] GI:16902292" 4 3 3 12 At1g21770 expressed protein 4 3 3 13 At1g21960 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 4 3 3 14 At1g22015 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 4 3 3 15 At1g24575 expressed protein 4 3 3 16 At1g24650 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 4 3 3 17 At1g25260 acidic ribosomal protein P0-related contains similarity to 60S acidic ribosomal protein GI:5815233 from [Homo sapiens] 4 3 3 18 At1g25290 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 4 3 3 19 At1g25450 "very-long-chain fatty acid condensing enzyme, putative nearly identical to fatty acid condensing enzyme CUT1 GI:5001734 from [Arabidopsis thaliana]" 4 3 3 20 At1g25500 choline transporter-related contains weak similarity to CD92 protein [Homo sapiens] gi|16945323|emb|CAC82175 4 3 3 21 At1g26150 protein kinase family protein similar to Pto kinase interactor 1 GI:3668069 from [Lycopersicon esculentum] 4 3 3 22 At1g26220 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to SP|P09453 Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) {Escherichia coli}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 4 3 3 23 At1g29090 peptidase C1A papain family protein contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]; contains Pfam profile PF00112: Papain family cysteine protease 4 3 3 24 At1g29160 Dof-type zinc finger domain-containing protein similar to ascorbate oxidase promoter-binding protein GB:D45066 GI:853689 from [Cucurbita maxima] 4 3 3 25 At1g29350 expressed protein 4 3 4 1 At1g29390 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 4 3 4 2 At1g29550 "eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative similar to SP|O23252 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F P26 subunit) {Arabidopsis thaliana}; contains Pfam profile PF01652: Eukaryotic initiation factor 4E" 4 3 4 3 At1g29610 hypothetical protein 4 3 4 4 At1g29800 zinc finger (FYVE type) family protein contains Pfam domain PF01363: FYVE zinc finger 4 3 4 5 At1g29850 double-stranded DNA-binding family protein contains Pfam profile: PF01984 double-stranded DNA-binding domain 4 3 4 6 At1g32700 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 4 3 4 7 At1g32750 "HAC13 protein (HAC13) identical to HAC13 [Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin family" 4 3 4 8 At1g32950 subtilase family protein contains similarity to SBT1 GI:1771160 from [Lycopersicon esculentum] 4 3 4 9 At1g33000 hypothetical protein 4 3 4 10 At1g33170 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 4 3 4 11 At1g33265 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136); supporting cDNA gi|23198247|gb|BT000332.1| 4 3 4 12 At1g33450 hypothetical protein low similarity to MtN20 [Medicago truncatula] GI:2598591 4 3 4 13 At1g33520 "KOW domain-containing protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF00467: KOW motif" 4 3 4 14 At1g42990 bZIP transcription factor family protein contains Pfam profile: PF00170: bZIP transcription factor 4 3 4 15 At1g43090 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 4 3 4 16 At1g43600 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 4 3 4 17 At1g43660 hypothetical protein 4 3 4 18 At1g43810 hypothetical protein 4 3 4 19 At1g43900 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GI:4336436 from [Lotus japonicus]" 4 3 4 20 At1g44120 "C2 domain-containing protein / armadillo/beta-catenin repeat family protein similar to CCLS 65 [Silene latifolia] GI:2570102; contains Pfam profiles PF00514: Armadillo/beta-catenin-like repeat, PF00168: C2 domain" 4 3 4 21 At1g44222 hypothetical protein 4 3 4 22 At1g49250 ATP dependent DNA ligase family protein contains Pfam profile: PF01068 ATP dependent DNA ligase domain 4 3 4 23 At1g49320 BURP domain-containing protein similarity to SP|Q08298 Dehydration-responsive protein RD22 precursor {Arabidopsis thaliana}; contains Pfam profile PF03181: BURP domain 4 3 4 24 At1g49510 expressed protein 4 3 4 25 At1g49580 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 4 3 5 1 At1g49750 "leucine-rich repeat family protein contains leucine-rich repeats, Pfam:PF00560" 4 3 5 2 At1g49810 "sodium hydrogen antiporter, putative similar to NhaD [Vibrio parahaemolyticus] gi|3123728|dbj|BAA25994; Na+/H+ aniporter (NhaD) family member, PMID:11500563" 4 3 5 3 At1g49960 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 4 3 5 4 At1g50010 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] 4 3 5 5 At1g52870 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:Q07066 22 kDa peroxisomal membrane protein [Rattus norvegicus] 4 3 5 6 At1g52920 "lanthionine synthetase C-like family protein contains Pfam domain, PF05147: Lanthionine synthetase C-like protein" 4 3 5 7 At1g53090 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400) (1 below cutoff); similar to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana] 4 3 5 8 At1g53160 squamosa promoter-binding protein-like 4 (SPL4) nearly identical to squamosa promoter binding protein-like 4 [Arabidopsis thaliana] GI:5931657; contains Pfam profile PF03110: SBP domain 4 3 5 9 At1g53300 "thioredoxin family protein contains Pfam profiles PF00085: Thioredoxin, PF00515: TPR Domain; similar to tetratricopeptide repeat protein 2 (GI:7248701) [Drosophila melanogaster]; similar to DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615) [Homo sapiens]" 4 3 5 10 At1g53345 expressed protein 4 3 5 11 At1g53510 "mitogen-activated protein kinase, putative / MAPK, putative (MPK18) mitogen-activated protein kinase (MAPK)(AtMPK18), PMID:12119167" 4 3 5 12 At1g53570 "mitogen-activated protein kinase kinase kinase (MAPKKK), putative (MAP3Ka) identical to MEK kinase (MAP3Ka)[Arabidopsis thaliana] gi|4204912|gb|AAD10848" 4 3 5 13 At1g56160 "myb family transcription factor (MYB72) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB72) mRNA, partial cds GI:3941501" 4 3 5 14 At1g56220 dormancy/auxin associated family protein similar to Auxin-repressed 12.5 kDa protein (Swiss-Prot:Q05349) [Fragaria ananassa]; similar to auxin-repressed protein (GI:927034) [Fragaria x ananassa]; similar to dormancy-associated protein (GI:2605887) [Pisum sativum] 4 3 5 15 At1g56360 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 4 3 5 16 At1g56430 "nicotianamine synthase, putative similar to nicotianamine synthase [Lycopersicon esculentum][GI:4753801], nicotianamine synthase 2 [Hordeum vulgare][GI:4894912]" 4 3 5 17 At1g56630 lipase class 3 family protein contains Pfam profile PF01764: Lipase 4 3 5 18 At1g56700 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (5-oxoprolyl- peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase). (Swiss-Prot:O73944) [Pyrococcus furiosus]; similar to Pyrrolidone-carboxylate peptidase (5-oxoprolyl- peptidase) (Pyroglutamyl-peptidase I) (PGP-I). (Swiss-Prot:O07883) [Thermococcus litoralis]; contains Pfam PF01470: pyrrolidone-carboxylate peptidase 4 3 5 19 At1g57650 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 4 3 5 20 At1g57720 "elongation factor 1B-gamma, putative / eEF-1B gamma, putative similar to elongation factor 1B gamma GI:3868758 from [Oryza sativa]" 4 3 5 21 At1g61590 "protein kinase, putative contains protein kinase domain, Pfam:PF00069; similar to serine/threonine protein kinase gi|1066501|gb|AAA81538" 4 3 5 22 At1g61660 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 4 3 5 23 At1g61820 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 4 3 5 24 At1g61870 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 5 25 At1g62045 expressed protein 4 3 6 1 At1g62110 mitochondrial transcription termination factor family protein / mTERF family protein contains Pfam profile PF02536: mTERF 4 3 6 2 At1g62290 "aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 4 3 6 3 At1g62340 subtilisin-like serine protease / abnormal leaf shape1 (ALE1) identical to subtilisin-like serine protease [Arabidopsis thaliana] GI:16444944 4 3 6 4 At1g65060 4-coumarate--CoA ligase 3 / 4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777 4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3) (4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana} 4 3 6 5 At1g65110 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 4 3 6 6 At1g65250 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 6 7 At1g65290 "acyl carrier family protein / ACP family protein similar to SP|P53665 Acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (MtACP-1) {Arabidopsis thaliana}; contains InterPro accession IPR003881: Isochorismatase" 4 3 6 8 At1g65440 glycine-rich protein 4 3 6 9 At1g65500 expressed protein 4 3 6 10 At1g65700 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens] SWISS-PROT:O95777" 4 3 6 11 At1g65770 F-box family protein contains F-box domain Pfam:PF00646 4 3 6 12 At1g68500 expressed protein 4 3 6 13 At1g68540 "oxidoreductase family protein similar to cinnamoyl CoA reductase [Eucalyptus gunnii, gi:2058311], cinnamyl-alcohol dehydrogenase, E. gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 4 3 6 14 At1g68700 hypothetical protein 4 3 6 15 At1g68750 phosphoenolpyruvate carboxylase family protein / PEP carboxylase family protein similar to SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase 4 3 6 16 At1g68910 "expressed protein similar to Myosin heavy chain, nonmuscle type B (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) (Swiss-Prot:Q27991) [Bos taurus]; contains 1 transmembrane domain" 4 3 6 17 At1g68940 armadillo/beta-catenin repeat protein-related / U-box domain-containing protein ; contains Pfam profile PF04564: U-box domain 4 3 6 18 At1g69150 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 3 6 19 At1g69210 expressed protein 4 3 6 20 At1g71920 "histidinol-phosphate aminotransferase, putative similar to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562] from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]" 4 3 6 21 At1g71980 "protease-associated zinc finger (C3HC4-type RING finger) family protein identical to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326; contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); identical to cDNA ReMembR-H2 protein JR702 mRNA, partial cds GI:6942148" 4 3 6 22 At1g72130 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 3 6 23 At1g72180 "leucine-rich repeat transmembrane protein kinase, putative similar to GI:3641252 from [Malus x domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))" 4 3 6 24 At1g72360 "ethylene-responsive element-binding protein, putative contains Pfam profile: PF00847 AP2 domain; similar to ethylene responsive element binding protein (GI:18496063)[Fagus sylvatica]" 4 3 6 25 At1g72430 auxin-responsive protein-related similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 4 3 7 1 At1g72590 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to Arabidopsis thaliana DET2 [gi:1280611]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544 4 3 7 2 At1g72645 expressed protein 4 3 7 3 AT5G57480 PC-1 C09 4 3 7 4 3XSSC PC-1 C21 4 3 7 5 AT1G29930 PC-1 G09 4 3 7 6 3XSSC PC-1 G21 4 3 7 7 AT3G44150 PC-1 K09 4 3 7 8 3XSSC PC-1 K21 4 3 7 9 AT4G00810 PC-1 O09 4 3 7 10 3XSSC PC-1 O21 4 3 7 11 At1g75420 "glycosyl transferase family 1 protein contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 4 3 7 12 At1g75490 "DRE-binding transcription factor, putative similar to DREB2A GB:BAA33794 GI:3738230 from [Arabidopsis thaliana] (Plant Cell 10 (8), 1391-1406 (1998))" 4 3 7 13 At1g75690 chaperone protein dnaJ-related contains Pfam PF00684 : DnaJ central domain (4 repeats); similar to bundle sheath defective protein 2 (GI:4732091) [Zea mays] 4 3 7 14 At1g75760 ER lumen protein retaining receptor family protein similar to SP|P33946 ER lumen protein retaining receptor 1 (KDEL receptor 1) {Bos taurus}; contains Pfam profile PF00810: ER lumen protein retaining receptor 4 3 7 15 At1g75920 family II extracellular lipase 5 (EXL5) EXL5 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana (Mouse-ear cress)] 4 3 7 16 At1g75990 "26S proteasome regulatory subunit S3, putative (RPN3) similar to 26S proteasome regulatory subunit S3 SP:P93768 [Nicotiana tabacum (Common tobacco)]" 4 3 7 17 At1g76150 maoC-like dehydratase domain-containing protein contains similarity to Swiss-Prot:P51659 estradiol 17 beta-dehydrogenase 4 (17-beta-HSD 4) (17-beta-hydroxysteroid dehydrogenase 4) [Homo sapiens]; contains Pfam profile PF01575: MaoC like domain 4 3 7 18 At1g76200 expressed protein 4 3 7 19 At1g78820 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein similar to S locus glycoprotein [Brassica rapa] GI:12246840; contains Pfam profile PF01453: Lectin (probable mannose binding) 4 3 7 20 At1g78870 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 4 3 7 21 At1g79010 "NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) identical to SP|Q42599 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23KD) (CI-23KD) (Complex I- 28.5KD) (CI-28.5KD) {Arabidopsis thaliana}" 4 3 7 22 At1g79070 SNARE-associated protein-related contains weak similarity to SNARE-associated protein snapin [Mus musculus] gi|4206090|gb|AAD11418 4 3 7 23 At1g79250 "protein kinase, putative similar to viroid symptom modulation protein/dual-specificity protein kinase [Lycopersicon esculentum] gi|7672777|gb|AAF66637" 4 3 7 24 At1g79330 "latex-abundant protein, putative (AMC6) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain" 4 3 7 25 At1g79470 inosine-5'-monophosphate dehydrogenase identical to inosine-5'-monophosphate dehydrogenase SP|P47996 {Arabidopsis thaliana} 4 3 8 1 At1g79510 expressed protein 4 3 8 2 At2g02120 "plant defensin-fusion protein, putative (PDF2.1) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); contains a gamma-thionin family signature (PDOC00725)" 4 3 8 3 At2g02180 tobamovirus multiplication protein 3 (TOM3) identical to tobamovirus multiplication protein (TOM3) GI:15425641 from [Arabidopsis thaliana] 4 3 8 4 At2g02410 expressed protein 4 3 8 5 At2g02480 DNA polymerase-related weak similarity to DNA polymerase III holoenzyme tau subunit [Thermus thermophilus] GI:2583049 4 3 8 6 At2g02660 hypothetical protein 4 3 8 7 At2g02730 expressed protein 4 3 8 8 At2g02880 mucin-related similar to putative mucin GI:18071389 [Oryza sativa] 4 3 8 9 At2g02960 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 4 3 8 10 At2g06510 "replication protein, putative similar to replication protein A 70kDa [Oryza sativa (japonica cultivar-group)] GI:13536993; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain" 4 3 8 11 At2g06620 hypothetical protein 4 3 8 12 At2g07000 expressed protein 4 3 8 13 At2g07110 hypothetical protein 4 3 8 14 At2g07390 hypothetical protein 4 3 8 15 At2g07640 "D2,D4-dienoyl-CoA reductase-related contains similarity to peroxisomal D2,D4-dienoyl-CoA reductase [Mus musculus] GI:5031508" 4 3 8 16 At2g07774 expressed protein 4 3 8 17 At2g07785 "NADH-ubiquinone oxidoreductase, putative similar to NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (Swiss-Prot:Q01300) [Petunia hybrida]" 4 3 8 18 At2g15320 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 4 3 8 19 At2g15360 hypothetical protein 4 3 8 20 At2g15535 SLR1 binding pollen coat protein-related contains weak similarity to SLR1 binding pollen coat protein [Brassica juncea] gi|7649936|dbj|BAA94096 4 3 8 21 At2g15590 expressed protein 4 3 8 22 At2g15780 glycine-rich protein similar to Blue copper protein precursor (SP:Q41001) {Pisum sativum}; contains a Pfam PF02298: Plastocyanin-like domain related to blue copper-binding protein; contains a domain related to blue copper-binding protein 4 3 8 23 At2g15860 expressed protein and genefinder 4 3 8 24 At2g16070 expressed protein 4 3 8 25 At2g16160 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 4 3 9 1 At2g18960 "ATPase 1, plasma membrane-type, putative / proton pump 1, putative / proton-exporting ATPase, putative strong similarity to SP|P20649 ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1) {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profile PF00690: Cation transporter/ATPase, N-terminus" 4 3 9 2 At2g19020 rapid alkalinization factor (RALF) family protein 4 3 9 3 At2g19220 hypothetical protein 4 3 9 4 At2g19290 expressed protein 4 3 9 5 At2g19480 "nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP)" 4 3 9 6 At2g19540 transducin family protein / WD-40 repeat family protein contains WD-40 repeats (PF00400); similar to Glutamate-rich WD repeat protein (GRWD) (SP:Q9BQ67)[Homo sapiens] 4 3 9 7 At2g19680 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 4 3 9 8 At2g19740 60S ribosomal protein L31 (RPL31A) 4 3 9 9 At2g22430 homeobox-leucine zipper protein 6 (HB-6) / HD-ZIP transcription factor 6 identical to homeobox-leucine zipper protein ATHB-6 (HD-ZIP protein ATHB-6) (SP:P46668) [Arabidopsis thaliana] 4 3 9 10 At2g22480 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 4 3 9 11 At2g22670 auxin-responsive protein / indoleacetic acid-induced protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 4 3 9 12 At2g22740 "SET domain-containing protein (SUVH6) identical to SUVH6 [Arabidopsis thaliana] GI:13517753; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain" 4 3 9 13 At2g22905 Expressed protein 4 3 9 14 At2g22960 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase ;similar to sinapoylglucose:malate sinapoyltransferase GI:8699619 from [Arabidopsis thaliana] 4 3 9 15 At2g23080 "casein kinase II alpha chain, putative identical to probable casein kinase II, alpha chain [Arabidopsis thaliana] SWISS-PROT:O64817; similar to casein kinase II, alpha chain 1 [Arabidopsis thaliana] SWISS-PROT:Q08467" 4 3 9 16 At2g23120 expressed protein 4 3 9 17 At2g26010 "plant defensin-fusion protein, putative (PDF1.3) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 4 3 9 18 At2g26050 hypothetical protein 4 3 9 19 At2g26240 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 4 3 9 20 At2g26300 guanine nucleotide binding protein (G-protein) alpha-1 subunit / GP-alpha-1 (GPA1) identical to SP|P18064 Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) {Arabidopsis thaliana} 4 3 9 21 At2g26480 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 3 9 22 At2g26520 expressed protein 4 3 9 23 At2g26680 expressed protein similar to NLPE1 (GI:13022100) [Rhizobium etli]; 4 3 9 24 At2g26730 "leucine-rich repeat transmembrane protein kinase, putative " 4 3 9 25 At2g29390 "sterol 4-alpha-methyl-oxidase 1 (SMO1) nearly identical to sterol 4-alpha-methyl-oxidase GI:16973469 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase (SMO) partial cds, GI:16973431" 4 3 10 1 At2g29450 glutathione S-transferase (103-1A) identical to Swiss-Prot:P46421 glutathione S-transferase 103-1A [Arabidopsis thaliana] 4 3 10 2 At2g29605 hypothetical protein 4 3 10 3 At2g29650 "inorganic phosphate transporter, putative similar to brain specific Na+-dependent inorganic phosphate cotransporter [Rattus norvegicus] GI:507415; contains Pfam profile PF00083: major facilitator superfamily protein" 4 3 10 4 At2g29810 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; similar to SKP1 interacting partner 6 (GI:10716957) [Arabidopsis thaliana] 4 3 10 5 At2g29870 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 4 3 10 6 At2g30010 expressed protein 4 3 10 7 At2g30080 "metal transporter, putative (ZIP6) identical to putative metal transporter ZIP6 [Arabidopsis thaliana] gi|17385786|gb|AAL38433; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 4 3 10 8 At2g32700 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] 4 3 10 9 At2g32740 exostosin family protein contains Pfam profile: PF03016 Exostosin family 4 3 10 10 At2g32880 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 4 3 10 11 At2g32930 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 3 10 12 At2g33110 synaptobrevin family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana} 4 3 10 13 At2g33180 expressed protein 4 3 10 14 At2g33320 C2 domain-containing protein low similarity to splicing coactivator subunit SRm300 [Homo sapiens] GI:6649242; contains Pfam profile PF00168: C2 domain 4 3 10 15 At2g33360 expressed protein 4 3 10 16 At2g35950 expressed protein 4 3 10 17 At2g36000 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 4 3 10 18 At2g36130 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 4 3 10 19 At2g36200 kinesin motor protein-related 4 3 10 20 At2g36360 "kelch repeat-containing protein low similarity to rngB protein, Dictyostelium discoideum, PIR:S68824; contains Pfam profile PF01344: Kelch motif" 4 3 10 21 At2g36410 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 4 3 10 22 At2g36580 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Glycine max] SWISS-PROT:Q42806" 4 3 10 23 At2g36650 expressed protein 4 3 10 24 At2g39210 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 4 3 10 25 At2g39270 adenylate kinase family protein contains Pfam profile: PF00406: adenylate kinase 4 3 11 1 At2g39420 "esterase/lipase/thioesterase family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 4 3 11 2 At2g39480 ABC transporter family protein related to multi drug resistance proteins and P-glycoproteins 4 3 11 3 At2g39670 radical SAM domain-containing protein similar to hypothetical protein PIR|S76698|S76698 contains Pfam profile PF04055: radical SAM domain protein 4 3 11 4 At2g39720 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 3 11 5 At2g39820 "eukaryotic translation initiation factor 6, putative / eIF-6, putative similar to SP|O55135 Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) {Mus musculus}; contains Pfam profile PF01912: eIF-6 family" 4 3 11 6 At2g39855 expressed protein 4 3 11 7 At2g42350 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 3 11 8 At2g42395 expressed protein 4 3 11 9 At2g42540 cold-responsive protein / cold-regulated protein (cor15a) identical to cold-regulated protein cor15a [Arabidopsis thaliana] GI:507149; contains Pfam profile PF02987: Late embryogenesis abundant protein 4 3 11 10 At2g42600 "phosphoenolpyruvate carboxylase, putative / PEP carboxylase, putative (PPC2) strong similarity to phosphoenolpyruvate carboxylase [Brassica napus] GI:507808; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase" 4 3 11 11 At2g42760 expressed protein 4 3 11 12 At2g42820 "abscisic acid-responsive HVA22 family protein contains Pfam profile PF03134: TB2/DP1, HVA22 family" 4 3 11 13 At2g42975 expressed protein 4 3 11 14 At2g43020 "amine oxidase family protein similar to polyamine oxidase SP:O64411 [Zea mays]; contains Pfam profile PF01593 amine oxidase, flavin-containing" 4 3 11 15 At2g45700 sterile alpha motif (SAM) domain-containing protein similar to SNM1 protein [Mus musculus] GI:7595835; contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 4 3 11 16 At2g45740 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam profile PF05648: Peroxisomal biogenesis factor 11 (PEX11) 4 3 11 17 At2g45920 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 4 3 11 18 At2g45980 expressed protein 4 3 11 19 At2g46130 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 4 3 11 20 At2g46190 hypothetical protein 4 3 11 21 At2g46320 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 4 3 11 22 At2g46370 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 4 3 11 23 At3g01720 expressed protein 4 3 11 24 At3g01780 "expressed protein est hit," 4 3 11 25 At3g01910 "sulfite oxidase, putative similar to sulfite oxidase GB:3212610 SP|P07850 [Gallus gallus], Moco containing protein [Oryza sativa (japonica cultivar-group)] GI:22759584; contains Pfam profiles: PF00174: Oxidoreductase molybdopterin binding domain and PF03404: Mo-co oxidoreductase dimerisation domain" 4 3 12 1 At3g01960 expressed protein 4 3 12 2 At3g02110 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase II (CP-MII) GB:CAA70815 (SP:P08818) [Hordeum vulgare] 4 3 12 3 At3g02150 "TCP family transcription factor, putative similar to transcription factor PCF6 [Oryza sativa (japonica cultivar-group)] GI:20975255; contains Pfam profile PF03634: TCP family transcription factor" 4 3 12 4 At3g02290 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger motif, C3HC4 type (RING finger)" 4 3 12 5 At3g02330 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 3 12 6 At3g04970 zinc finger (DHHC type) family protein similar to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 4 3 12 7 At3g05020 "acyl carrier protein 1, chloroplast (ACP-1) identical to SP|P11829 Acyl carrier protein 1, chloroplast precursor (ACP) {Arabidopsis thaliana}" 4 3 12 8 At3g05170 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 4 3 12 9 At3g05230 signal peptidase subunit family protein contains Pfam profile: PF04573 signal peptidase subunit 4 3 12 10 At3g05410 expressed protein 4 3 12 11 At3g05470 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 4 3 12 12 At3g05600 "epoxide hydrolase, putative similar to epoxide hydrolase from [Glycine max] GI:2764806, [Arabidopsis thaliana] GI:1109600; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 3 12 13 At3g05640 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase-2C GB:AAC36699 from [Mesembryanthemum crystallinum]" 4 3 12 14 At3g08530 "clathrin heavy chain, putative similar to Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo sapiens]" 4 3 12 15 At3g08590 "2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative strong similarity to SP|Q42908 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) {Mesembryanthemum crystallinum}; contains Pfam profile PF01676: Metalloenzyme superfamily" 4 3 12 16 At3g08760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 12 17 At3g08820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 12 18 At3g08950 "electron transport SCO1/SenC family protein similar to SP|P23833 SCO1 protein, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF02630: SCO1/SenC" 4 3 12 19 At3g09000 proline-rich family protein 4 3 12 20 At3g09130 hypothetical protein 4 3 12 21 At3g09162 expressed protein 4 3 12 22 At3g11670 digalactosyldiacylglycerol synthase 1 (DGD1) / MGDG:MGDG galactosyltransferase / galactolipid galactosyltransferase identical to digalactosyldiacylglycerol synthase (DGD1) GI:5354158 [Arabidopsis thaliana] 4 3 12 23 At3g11730 "Ras-related GTP-binding protein, putative similar to Rab1-like small GTP-binding protein GI:4096662 from [Petunia x hybrida]" 4 3 12 24 At3g11880 expressed protein 4 3 12 25 At3g11920 "glutaredoxin-related contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 4 3 13 1 At3g12050 Aha1 domain-containing protein contains Pfam PF05146: Aha1 domain; similar to Protein C14orf3 (HSPC322) (Swiss-Prot:O95433) [Homo sapiens] 4 3 13 2 At3g12080 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 4 3 13 3 At3g12220 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase; similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 4 3 13 4 At3g12260 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 4 3 13 5 At3g14720 "mitogen-activated protein kinase, putative / MAPK, putative (MPK19) identical to mitogen-activated protein kinase (MAPK)(AtMPK19), PMID:12119167;" 4 3 13 6 At3g14770 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 4 3 13 7 At3g14890 phosphoesterase identical to phosphoesterase [Arabidopsis thaliana] GI:21630064; contains Pfam profile PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 4 3 13 8 At3g14940 "phosphoenolpyruvate carboxylase, putative / PEP carboxylase, putative strong similarity to SP|P29196 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCASE) {Solanum tuberosum}; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase" 4 3 13 9 At3g15080 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 4 3 13 10 At3g15130 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 3 13 11 At3g15300 VQ motif-containing protein contains PF05678: VQ motif 4 3 13 12 At3g15354 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400); phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana] 4 3 13 13 At3g17940 aldose 1-epimerase family protein similar to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149] from [Acinetobacter calcoaceticus]; contains Pfam profile PF01263 Aldose 1-epimerase 4 3 13 14 At3g18020 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 13 15 At3g18165 expressed protein similar to DAM1 (GI:3985930) [Homo sapiens]; contains Pfam profile PF05700: Breast carcinoma amplified sequence 2 (BCAS2) 4 3 13 16 At3g18215 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 4 3 13 17 At3g18380 expressed protein 4 3 13 18 At3g18420 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile: PF00515 tetratricopeptide repeat domain (TPR domain) 4 3 13 19 At3g18580 single-strand-binding family protein contains Pfam domain PF00436: Single-strand binding protein family 4 3 13 20 At3g18640 zinc finger protein-related contains similarity to zinc finger proteins (CCCH type) 4 3 13 21 At3g21320 hypothetical protein 4 3 13 22 At3g21380 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile: PF01419 jacalin-like lectin domain 4 3 13 23 At3g21560 "UDP-glucosyltransferase, putative similar to UDP-glucose:sinapate glucosyltransferase GI:9794913 from [Brassica napus]" 4 3 13 24 At3g21600 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 4 3 13 25 At3g21720 "isocitrate lyase, putative similar to isocitrate lyase GI:167144 from [Brassica napus]" 4 3 14 1 At3g21770 peroxidase 30 (PER30) (P30) (PRXR9) identical to SP|Q9LSY7 Peroxidase 30 precursor (EC 1.11.1.7) (Atperox P30) (PRXR9) (ATP7a) {Arabidopsis thaliana} 4 3 14 2 At3g21940 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function 4 3 14 3 At3g22000 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 4 3 14 4 At3g24710 hypothetical protein 4 3 14 5 At3g24760 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 4 3 14 6 At3g25020 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 4 3 14 7 At3g25080 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 4 3 14 8 At3g25230 "peptidyl-prolyl cis-trans isomerase / FK506-binding protein (ROF1) identical to rotamase FKBP (ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen. Genet. 252 (5), 510-517 (1996))" 4 3 14 9 At3g25290 auxin-responsive family protein similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana] 4 3 14 10 At3g25570 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase 4 3 14 11 At3g25600 "calmodulin, putative similar to calmodulin GI:239841 from [Paramecium tetraurelia]" 4 3 14 12 At3g28230 hypothetical protein 4 3 14 13 At3g28290 "integrin-related protein 14a identical to At14a protein GI:11994573 [Arabidopsis thaliana] [Gene 230 (1), 33-40 (1999)], At14a protein [Arabidopsis thaliana] GI:4589123" 4 3 14 14 At3g28470 myb family transcription factor (MYB35) similar to Atmyb103 GB:AAD40692 from [Arabidopsis thaliana]; contains PFAM profile: myb DNA binding domain PF00249 4 3 14 15 At3g28530 expressed protein 4 3 14 16 At3g28710 "H+-transporting two-sector ATPase, putative similar to SP|P54641 Vacuolar ATP synthase subunit d (EC 3.6.3.14) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) {Dictyostelium discoideum}; contains Pfam profile PF01992: ATP synthase (C/AC39) subunit" 4 3 14 17 At3g28760 expressed protein contains Pfam PF01959: predicted 3-dehydroquinate synthase 4 3 14 18 At3g28925 hypothetical protein 4 3 14 19 At3g28960 "amino acid transporter family protein low similarity to vesicular inhibitory amino acid transporter [Mus musculus] GI:2826776; contains INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 4 3 14 20 At3g42770 F-box family protein contains F-box domain Pfam:PF00646 4 3 14 21 At3g42820 hypothetical protein hypothetical proteins - Arabidopsis thaliana 4 3 14 22 At3g43150 hypothetical protein 4 3 14 23 At3g43210 kinesin motor family protein (NACK2) contains Pfam profile: PF00225 kinesin motor domain 4 3 14 24 At3g43410 hypothetical protein 4 3 14 25 At3g43470 hypothetical protein 4 3 15 1 At3g43660 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 4 3 15 2 At3g43710 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 4 3 15 3 At3g46660 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 3 15 4 At3g46720 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 4 3 15 5 At3g46900 "copper transporter, putative similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family" 4 3 15 6 At3g46960 "DEAD/DEAH box helicase, putative similar to SP|P35207 Antiviral protein SKI2 {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 4 3 15 7 At3g47140 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 4 3 15 8 At3g47200 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 4 3 15 9 At3g47350 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 4 3 15 10 At3g47390 cytidine/deoxycytidylate deaminase family protein similar to riboflavin-specific deaminase [Actinobacillus pleuropneumoniae] GI:1173516; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 4 3 15 11 At3g50210 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 4 3 15 12 At3g50250 "hypothetical protein predicted protein, Arabidopsis thaliana" 4 3 15 13 At3g50420 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 3 15 14 At3g50480 broad-spectrum mildew resistance RPW8 family protein contains Pfam PF05659: Arabidopsis broad-spectrum mildew resistance protein RPW8 4 3 15 15 At3g50660 steroid 22-alpha-hydroxylase (CYP90B1) (DWF4) identical to gi:2935342 4 3 15 16 At3g50710 F-box family protein contains F-box domain Pfam:PF00646 4 3 15 17 At3g50890 "zinc finger homeobox family protein / ZF-HD homeobox family protein hypothetical protein T8K22.16 - Arabidopsis thaliana, chromosome II BAC T8K22, PIR2:T00609" 4 3 15 18 At3g50950 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 4 3 15 19 At3g53500 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 4 3 15 20 At3g53550 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 4 3 15 21 At3g53720 "cation/hydrogen exchanger, putative (CHX20) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 4 3 15 22 At3g53760 "tubulin family protein similar to SP|Q9SC88 Gamma-tubulin complex component 4 homolog {Medicago truncatula}, SP|Q9UGJ1|GCP4_HUMAN Gamma-tubulin complex component 4 {Homo sapiens}; contains Pfam profile PF04130: Spc97 / Spc98 family" 4 3 15 23 At3g53900 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|P50926 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Lactococcus lactis}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 4 3 15 24 At3g53960 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 3 15 25 At3g54080 expressed protein 4 3 16 1 At3g54140 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 3 16 2 At3g56910 expressed protein 4 3 16 3 At3g56970 basic helix-loop-helix (bHLH) family protein 4 3 16 4 At3g57150 "dyskerin, putative / nucleolar protein NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar protein NAP57) {Rattus norvegicus}; contains Pfam profiles PF01509: TruB family pseudouridylate synthase (N terminal domain), PF01472: PUA domain; supporting cDNA gi|8901185|gb|AF234984.2|AF234984" 4 3 16 5 At3g57210 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 4 3 16 6 At3g57370 transcription factor IIB (TFIIB) family protein contains Pfam profile: PF00382 transcription factor TFIIB repeat 4 3 16 7 At3g57410 villin 3 (VLN3) nearly identical to villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117 4 3 16 8 At3g57580 "F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 4 3 16 9 At3g57640 protein kinase family protein contains similarity to protein kinases 4 3 16 10 At3g60400 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 4 3 16 11 At3g60450 expressed protein 4 3 16 12 At3g60600 "vesicle-associated membrane protein, putative / VAMP, putative similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia]" 4 3 16 13 At3g60670 "zinc-binding protein, putative similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 4 3 16 14 At3g60830 actin-related protein 7 (ARP7) identical to actin-related protein 7 (ARP7) [Arabidopsis thaliana] GI:21427469; contains Pfam profile PF00022: Actin 4 3 16 15 At3g60890 hypothetical protein 4 3 16 16 At3g61070 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) 4 3 16 17 At3g61130 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 4 3 16 18 At4g00238 "DNA-binding storekeeper protein-related contains Pfam PF04504: Protein of unknown function, DUF573; similar to storekeeper protein GI:14268476 [Solanum tuberosum]" 4 3 16 19 At4g00290 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein weak similarity to SP|P77338 Potassium efflux system kefA {Escherichia coli}; contains Pfam profile PF00924: Mechanosensitive ion channel 4 3 16 20 At4g00390 "expressed protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 4 3 16 21 At4g00430 "plasma membrane intrinsic protein, putative identical to transmembrane protein GI:535780 from [Arabidopsis thaliana]; very strong similarity to SP|Q08733 Plasma membrane intrinsic protein 1C (Transmembrane protein B) (TMP-B) {Arabidopsis thaliana}; contains Pfam profile PF00230: Major intrinsic protein;" 4 3 16 22 At4g00560 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] 4 3 16 23 At4g00590 asparaginase 2 family protein very low similarity to glycosylasparaginase [SP|P20933] from Homo sapiens; contains Pfam profile PF01112: Asparaginase 2 4 3 16 24 At4g00740 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 4 3 16 25 At4g00760 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 4 3 17 1 At4g03260 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 4 3 17 2 At4g03292 expressed protein ; expression supported by MPSS 4 3 17 3 At4g03440 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 4 3 17 4 At4g03500 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 4 3 17 5 At4g03670 hypothetical protein 4 3 17 6 At4g03830 myosin heavy chain-related 4 3 17 7 At4g04080 "iron-sulfur cluster assembly complex protein, putative similar to ISCU2 (GI:11545707) [Homo sapiens]" 4 3 17 8 At4g04190 expressed protein 4 3 17 9 At4g08870 "arginase, putative similar to Swiss-Prot:P46637 arginase (EC 3.5.3.1) [Arabidopsis thaliana]" 4 3 17 10 At4g08900 arginase identical to Swiss-Prot:P46637 arginase (EC 3.5.3.1) [Arabidopsis thaliana] 4 3 17 11 At4g09100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 3 17 12 At4g09160 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to polyphosphoinositide binding protein Ssh2, Glycine max, gb:T05953; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 4 3 17 13 At4g09390 hypothetical protein various predicted proteins -Arabidopsis thaliana 4 3 17 14 At4g09460 myb family transcription factor 4 3 17 15 At4g09620 "expressed protein hypothetical protein F6E13.15 - Arabidopsis thaliana,PIR2:T00682" 4 3 17 16 At4g09680 expressed protein 4 3 17 17 At4g12440 "adenine phosphoribosyltransferase, putative strong similarity to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 4 3 17 18 At4g12480 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein identical to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 4 3 17 19 At4g12670 expressed protein ; expression supported by MPSS 4 3 17 20 At4g12720 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 4 3 17 21 At4g12880 plastocyanin-like domain-containing protein 4 3 17 22 At4g12940 "expressed protein hypothetical protein - Arabidopsis thaliana,PIR2:T08948; expression supported by MPSS" 4 3 17 23 At4g13100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 4 3 17 24 At4g13170 "60S ribosomal protein L13A (RPL13aC) ribosomal protein L13a -Lupinus luteus,PID:e1237871" 4 3 17 25 At4g15510 photosystem II reaction center PsbP family protein contains PsbP domain PF01789; identical to SP:O23403 (Arabidopsis thaliana) 4 3 18 1 At4g15560 "1-deoxy-D-xylulose 5-phosphate synthase, putative / 1-deoxyxylulose-5-phosphate synthase, putative / DXP-synthase, putative (DEF) (CLA1) identical to SP|Q38854 Probable 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor (EC 4.1.3.37) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS). [Mouse-ear cress] {Arabidopsis thaliana}, DEF (deficient in photosynthesis) protein [Arabidopsis thaliana] GI:1399261" 4 3 18 2 At4g15740 C2 domain-containing protein similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 4 3 18 3 At4g15780 synaptobrevin-related family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana} 4 3 18 4 At4g15950 expressed protein 4 3 18 5 At4g15990 hypothetical protein 4 3 18 6 At4g16143 "importin alpha-2, putative (IMPA-2) similar to importin alpha 2 [Capsicum annuum] GI:13752562; contains Pfam profiles PF01749: Importin beta binding domain, PF00514: Armadillo/beta-catenin-like repeat; non-consensus GG donor splice site at exon 1 and 6; CT acceptor splice site at exon 2" 4 3 18 7 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 4 3 18 8 At4g18650 transcription factor-related contains weak similarity to TGACG-sequence specific DNA-binding protein TGA-2.1 (TGA2.1) (Swiss-Prot:O24160) [Nicotiana tabacum] 4 3 18 9 At4g18710 shaggy-related protein kinase eta / ASK-eta (ASK7) identical to shaggy-related protein kinase eta (ASK-eta) [Arabidopsis thaliana] SWISS-PROT:Q39011 4 3 18 10 At4g18870 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 4 3 18 11 At4g18920 expressed protein 4 3 18 12 At4g19050 "mob1/phocein family protein contains Pfam PF03637: Mob1/phocein family; contains Pfam F00560: Leucine Rich Repeats; contains TIGRFAMS profile TIGR01612: reticulocyte binding protein; hypothetical protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466" 4 3 18 13 At4g19100 expressed protein 4 3 18 14 At4g19230 "cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_" 4 3 18 15 At4g19280 hypothetical protein 4 3 18 16 At4g22160 expressed protein 4 3 18 17 At4g22190 expressed protein 4 3 18 18 At4g22290 ubiquitin carboxyl-terminal hydrolase family protein similar to pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens] GI:18698435; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 4 3 18 19 At4g22340 "phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative similar to CDP-diacylglycerol synthetase (CDS) GI:2181182 from [Arabidopsis thaliana]" 4 3 18 20 At4g22530 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 4 3 18 21 At4g22580 exostosin family protein contains Pfam profile: PF03016 Exostosin family 4 3 18 22 At4g22745 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 4 3 18 23 At4g22780 ACT domain-containing protein (ACR7) low similarity to uridylyltransferase SP|P56884 from Rhizobium meliloti; contains Pfam ACT domain PF01842 4 3 18 24 At4g25360 expressed protein 4 3 18 25 At4g25400 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 4 3 19 1 At4g25550 expressed protein 4 3 19 2 At4g25610 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 4 3 19 3 At4g25770 expressed protein 4 3 19 4 At4g25830 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 4 3 19 5 At4g25990 expressed protein 4 3 19 6 At4g26040 hypothetical protein 4 3 19 7 At4g28540 "casein kinase, putative similar to casein kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395; contains protein kinase domain, Pfam:PF00069" 4 3 19 8 At4g28600 calmodulin-binding protein similar to pollen-specific calmodulin-binding protein MPCBP GI:10086260 from [Zea mays] 4 3 19 9 At4g28740 expressed protein 4 3 19 10 At4g28800 bHLH family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 4 3 19 11 At4g28980 cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1) identical to Cdk-activating kinase 1At [Arabidopsis thaliana] gi|3218550|dbj|BAA28775 4 3 19 12 At4g29040 "26S proteasome AAA-ATPase subunit (RPT2a) almost identical to 26S proteasome AAA-ATPase subunit RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila melanogaster 26S proteasome subunit 4 ATPase, PID:g1066065" 4 3 19 13 At4g29200 hypothetical protein 4 3 19 14 At4g29240 leucine-rich repeat family protein / extensin family protein contains Pfam PF00560: Leucine Rich Repeat domains; similar to leucine-rich repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana] 4 3 19 15 At4g31790 "diphthine synthase, putative (DPH5) similar to Diphthine synthase (Diphtamide biosynthesis methyltransferase) (DPH5) (SP:P32469) [Saccharomyces cerevisiae]; similar to CGI-30 protein (GI:4680699) [Homo sapiens]; similar to methyltransferase DPH5, Saccharomyces cerevisiae, PIR2:S30890; contains Pfam PF00590 : Tetrapyrrole (Corrin/Porphyrin) Methylases domain; contains TIGRFAMS TIGR00522 : diphthine synthase" 4 3 19 16 At4g31840 plastocyanin-like domain-containing protein 4 3 19 17 At4g31990 "aspartate aminotransferase, chloroplast / transaminase A (ASP5) (AAT1) nearly identical to SP|P46248 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}" 4 3 19 18 At4g32030 expressed protein 4 3 19 19 At4g32180 "eukaryotic pantothenate kinase family protein similar to pantothenate kinase [Emericella nidulans] GI:4191500; contains Pfam profiles PF03630: Fumble, PF01937: Protein of unknown function" 4 3 19 20 At4g32260 ATP synthase family contains Pfam profile: PF00430 ATP synthase B/B' CF(0); identical to cDNA chloroplast ATP synthase beta chain precursor (atpG) GI:5730140 4 3 19 21 At4g32420 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein weak similarity to CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 4 3 19 22 At4g32460 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 4 3 19 23 AT5G57480 PC-1 C09 4 3 19 24 3XSSC PC-1 C21 4 3 19 25 AT1G29930 PC-1 G09 4 3 20 1 3XSSC PC-1 G21 4 3 20 2 AT3G44150 PC-1 K09 4 3 20 3 3XSSC PC-1 K21 4 3 20 4 AT4G00810 PC-1 O09 4 3 20 5 3XSSC PC-1 O21 4 3 20 6 At4g35030 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 4 3 20 7 At4g35080 "high-affinity nickel-transport family protein contains Pfam domain, PF03824: High-affinity nickel-transport protein" 4 3 20 8 At4g35230 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 20 9 At4g35290 "glutamate receptor family protein (GLR3.2) (GLUR2) identical to putative glutamate receptor like-protein GLUR2 [Arabidopsis thaliana] gi|13160471|gb|AAK13248; plant glutamate receptor family, PMID:11379626" 4 3 20 10 At4g35410 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 4 3 20 11 At4g35470 "leucine-rich repeat family protein similar to Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13 ){Homo sapiens},PIR:T12704; contains Pfam PF00560: Leucine Rich Repeat domains" 4 3 20 12 At4g35630 "phosphoserine aminotransferase, chloroplast (PSAT) identical to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V" 4 3 20 13 At4g35690 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 4 3 20 14 At4g38300 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 4 3 20 15 At4g38360 expressed protein contains Pfam profile PF03619: Domain of unknown function 4 3 20 16 At4g38540 "monooxygenase, putative (MO2) identical to GI:3426064" 4 3 20 17 At4g38600 HECT-domain-containing protein / ubiquitin-transferase family protein similar to SP|Q14669Thyroid receptor interacting protein 12 (TRIP12) {Homo sapiens}; contains Pfam profile PF00632: HECT-domain (ubiquitin-transferase) 4 3 20 18 At4g38780 "splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 4 3 20 19 At4g38830 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 4 3 20 20 At4g38970 "fructose-bisphosphate aldolase, putative strong similarity to plastidic fructose-bisphosphate aldolase (EC 4.1.2.13) from Nicotiana paniculata (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057 [SP|Q40677]" 4 3 20 21 At4g39010 "glycosyl hydrolase family 9 protein endo-1,4-beta-glucanase precursor - Fragariax ananassa, PID:g3549291" 4 3 20 22 At5g02460 "Dof-type zinc finger domain-containing protein zinc finger protein OBP3, Arabidopsis thaliana, EMBL:AF155818" 4 3 20 23 At5g02500 heat shock cognate 70 kDa protein 1 (HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis thaliana} 4 3 20 24 At5g02630 expressed protein 4 3 20 25 At5g02690 expressed protein 4 3 21 1 At5g02840 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 4 3 21 2 At5g02890 transferase family protein contains Pfam profile PF02458: Transferase family 4 3 21 3 At5g03070 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 4 3 21 4 At5g03130 hypothetical protein 4 3 21 5 At5g05790 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 4 3 21 6 At5g05850 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeat domains; similar to (SP:Q9UQ13) Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13) {Homo sapiens} 4 3 21 7 At5g05990 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 4 3 21 8 At5g06050 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 4 3 21 9 At5g06180 expressed protein similar to unknown protein (sp|Q9ZE28) 4 3 21 10 At5g06230 expressed protein contains Pfam profile PF03005: Arabidopsis proteins of unknown function 4 3 21 11 At5g06390 beta-Ig-H3 domain-containing protein / fasciclin domain-containing protein contains Pfam profile PF02469: Fasciclin domain 4 3 21 12 At5g06440 expressed protein similar to unknown protein (gb|AAF23188.1) 4 3 21 13 At5g09530 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 4 3 21 14 At5g09590 heat shock protein 70 / HSP70 (HSC70-5) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746590 4 3 21 15 At5g09760 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 4 3 21 16 At5g09820 plastid-lipid associated protein PAP / fibrillin family protein low similarity to plastid-lipid associated protein PAP3 [Brassica rapa] GI:14248552; contains Pfam profile PF04755: PAP_fibrillin 4 3 21 17 At5g09980 expressed protein 4 3 21 18 At5g10010 expressed protein 4 3 21 19 At5g10170 "inositol-3-phosphate synthase, putative / myo-inositol-1-phosphate synthase, putative / MI-1-P synthase, putative very strong similarity to SP|Q38862 Myo-inositol-1-phosphate synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS 2) {Arabidopsis thaliana}; identical to SP|Q9LX12| Probable inositol-3-phosphate synthase isozyme 3 (EC 5.5.1.4) (Myo- inositol-1-phosphate synthase 3) (MI-1-P synthase 3) (IPS 3) {Arabidopsis thaliana}; contains Pfam profile PF01658: Myo-inositol-1-phosphate synthase" 4 3 21 20 At5g10230 annexin 7 (ANN7) nearly identical to calcium-binding protein annexin 7 [Arabidopsis thaliana] GI:12667522 4 3 21 21 At5g13350 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 4 3 21 22 At5g13410 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein SP:Q9LYR5; similar to FK506-binding protein (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:P25138) [{Neisseria meningitidis]; peptidyl-prolyl cis-trans isomerase, Spodoptera frugiperda, EMBL:SF15038; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 4 3 21 23 At5g13550 "sulfate transporter family protein similar to sulfate transporter [Arabidopsis thaliana] GI:3777483; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain" 4 3 21 24 At5g13610 expressed protein 4 3 21 25 At5g13770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 22 1 At5g13825 hypothetical protein 4 3 22 2 At5g13990 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 4 3 22 3 At5g14050 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to unknown protein (ref|NP_057085.1) 4 3 22 4 At5g16790 expressed protein 4 3 22 5 At5g16830 syntaxin 21 (SYP21) / PEP12 homolog identical to Syntaxin homolog (PEP12 homolog) (SP:Q39233) and syntaxin of plants 21 (GP:899122) {Arabidopsis thaliana}; contains Pfam profiles PF05739:SNARE domain and PF00804: Syntaxin 4 3 22 6 At5g17000 "NADP-dependent oxidoreductase, putative strong similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 4 3 22 7 At5g17050 "UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP glucose:flavonoid 3-o-glucosyltransferase, Vitis vinifera, EMBL:AF000372" 4 3 22 8 At5g17210 expressed protein 4 3 22 9 At5g17270 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 4 3 22 10 At5g17440 "LUC7 N_terminus domain-containing protein contains Pfam domain PF03194: Protein of unknown function, DUF259" 4 3 22 11 At5g17480 "polcalcin, putative / calcium-binding pollen allergen, putative similar to polcalcin Bra r 2/Bra n 2 (Calcium-binding pollen allergen Bra r 2/Bra n 2) SP:Q39406 from [Brassica napus]" 4 3 22 12 At5g20045 expressed protein 4 3 22 13 At5g20100 "expressed protein predicted proteins, Arabidopsis thaliana" 4 3 22 14 At5g20250 "raffinose synthase family protein / seed imbibition protein, putative (din10) similar to seed imbibition protein GB:AAA32975 GI:167100 from [Hordeum vulgare]; contains nonconsensus AT donor splice site at intron 1; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1; identical to cDNA seed imbibition protein (din10) partial cds GI:10834551" 4 3 22 15 At5g20310 hypothetical protein 4 3 22 16 At5g20490 "myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin-like protein my5, common sunflower, PIR:T14279" 4 3 22 17 At5g20560 "beta-1,3-glucanase, putative similar to plant beta-1,3-glucanase genes bg4 GI:2808438 from [Arabidopsis thaliana]" 4 3 22 18 At5g20710 "beta-galactosidase, putative / lactase, putative strong similarity to beta-galactosidase precursor (EC 3.2.1.23) (Lactase) SP:P49676 from [Brassica oleracea]" 4 3 22 19 At5g20730 auxin-responsive factor (ARF7) identical to auxin response factor 7 GI:4104929 from [Arabidopsis thaliana] 4 3 22 20 At5g24070 "peroxidase family protein similar to cationic peroxidase, Peanut [Arachis hypogaea] GP|166475|gb|AAA32676; contains Pfam profile PF00141: Peroxidase" 4 3 22 21 At5g24120 "RNA polymerase sigma subunit SigE (sigE) / sigma-like factor (SIG5) identical to RNA polymerase sigma subunit SigE [Arabidopsis thaliana] GI:4972299, sigma-like factor [Arabidopsis thaliana] GI:4033838; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 4 3 22 22 At5g24280 expressed protein ; expression supported by MPSS 4 3 22 23 At5g24313 expressed protein 4 3 22 24 At5g24440 "RNA-binding protein, putative " 4 3 22 25 At5g24500 expressed protein 4 3 23 1 At5g24655 expressed protein 4 3 23 2 At5g24740 expressed protein 4 3 23 3 At5g27650 "PWWP domain-containing protein hypothetical protein F22F7.12 - Arabidopsis thaliana, EMBL:AC009606" 4 3 23 4 At5g27710 expressed protein 4 3 23 5 At5g27870 "pectinesterase family protein similar to pectinesterase (EC 3.1.1.11) from Salix gilgiana GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus vulgaris SP|Q43111; contains Pfam profile PF01095 pectinesterase" 4 3 23 6 At5g27930 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase-2C, Mesembryanthemum crystallinum, EMBL:AF075581" 4 3 23 7 At5g28110 hypothetical protein 4 3 23 8 At5g28170 "hypothetical protein similar to At1g35110, At1g44880, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350" 4 3 23 9 At5g28360 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to 1-aminocyclopropane-1-carboxylate synthase 1 [Lupinus albus] GI:6650976; contains Pfam profile PF00155: Aminotransferase class I and II" 4 3 23 10 At5g28420 hypothetical protein predicted proteins - Arabidopsis thaliana 4 3 23 11 At5g36690 hypothetical protein 4 3 23 12 At5g36735 hypothetical protein 4 3 23 13 At5g36940 amino acid permease family protein similar to SP|Q09143 High-affinity cationic amino acid transporter-1 (CAT-1) {Mus musculus}; contains Pfam profile PF00324: Amino acid permease 4 3 23 14 At5g37010 expressed protein 4 3 23 15 At5g37175 hypothetical protein 4 3 23 16 At5g37230 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575]; contains Pfam domain zinc finger, C3HC4 type (RING finger) PF00097" 4 3 23 17 At5g37390 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 4 3 23 18 At5g37440 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 4 3 23 19 At5g40330 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 4 3 23 20 At5g40390 "raffinose synthase family protein similar to galactinol-raffinose galactosyltransferase [Vigna angularis] GI:6634701, seed imbibition protein GB:AAA32975 GI:167100 from [Hordeum vulgare]; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1" 4 3 23 21 At5g40550 expressed protein 4 3 23 22 At5g40590 "DC1 domain-containing protein predicted protein, Arabidopsis thaliana" 4 3 23 23 At5g40750 hypothetical protein 4 3 23 24 At5g40810 "cytochrome c1, putative cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) [Solanum tuberosum] SWISS-PROT:P25076" 4 3 23 25 At5g40980 expressed protein 4 3 24 1 At5g41040 "transferase family protein similar to hypersensitivity-related gene product HSR201 - Nicotiana tabacum, EMBL:X95343; contains Pfam transferase family domain PF00248" 4 3 24 2 At5g43720 expressed protein 4 3 24 3 At5g43770 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 4 3 24 4 At5g43940 alcohol dehydrogenase class III / glutathione-dependent formaldehyde dehydrogenase / GSH-FDH (ADHIII) identical to gi:1143388 4 3 24 5 At5g43980 receptor-like protein kinase-related similar to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]; contains Pfam PF01657: Domain of unknown function 4 3 24 6 At5g44140 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family; non-consensus TT acceptor splice site at exon 2" 4 3 24 7 At5g44200 "nuclear cap-binding protein, putative similar to SP|P52298 20 kDa nuclear cap binding protein (CBP20) (NCBP interacting protein 1) {Homo sapiens}; non-consensus AT donor splice site at exon 4, AC acceptor splice site at exon 5; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 4 3 24 8 At5g44340 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} 4 3 24 9 At5g44390 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 4 3 24 10 At5g46920 "intron maturase, type II family protein similar to SP|Q57005 Group II intron-encoded protein ltrA {Lactococcus lactis subsp}; contains Pfam profiles PF00078: Reverse transcriptase (RNA-dependent DNA polymerase), PF01348: Type II intron maturase" 4 3 24 11 At5g46980 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 4 3 24 12 At5g47140 zinc finger (GATA type) family protein contains Pfam:PF00320 GATA zinc finger domain 4 3 24 13 At5g47190 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 4 3 24 14 At5g47360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 3 24 15 At5g47420 "expressed protein contains Pfam domain, PF01987: Protein of unknown function" 4 3 24 16 At5g47520 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB11J GI:1370160 from [Lotus japonicus]" 4 3 24 17 At5g47580 expressed protein strong similarity to unknown protein (pir||E71441) 4 3 24 18 At5g50210 quinolinate synthetase A-related contains weak similarity to Swiss-Prot:P11458 quinolinate synthetase A [Escherichia coli] 4 3 24 19 At5g50270 F-box family protein contains F-box domain Pfam:PF00646 4 3 24 20 At5g50430 "ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme 6 from [Homo sapiens] GI:14029267, [Mus musculus] GI:14029263; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 4 3 24 21 At5g50490 "CCAAT-box binding transcription factor Hap5a, putative " 4 3 24 22 At5g50670 "squamosa promoter-binding protein, putative similar to squamosa promoter binding protein-like 9 [Arabidopsis thaliana] GI:5931673; contains Pfam profile PF03110: SBP domain" 4 3 24 23 At5g50750 "reversibly glycosylated polypeptide, putative strong similarity to reversibly glycosylated polypeptide-1 (AtRGP) [Arabidopsis thaliana] GI:2317729; contains Pfam profile PF03214: Reversibly glycosylated polypeptide" 4 3 24 24 At5g50910 hypothetical protein 4 3 24 25 At5g50960 nucleotide-binding family protein similar to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus musculus]; contains Pfam PF00991 : ParA family ATPase 4 3 25 1 At5g53710 expressed protein 4 3 25 2 At5g53770 "nucleotidyltransferase family protein contains Pfam domains PF03828: PAP/25A associated domain, PF01909: Nucleotidyltransferase domain" 4 3 25 3 At5g53905 expressed protein 4 3 25 4 At5g53960 hypothetical protein 4 3 25 5 At5g54100 band 7 family protein similar to stomatin-like protein [Zea mays] GI:7716464; contains Pfam profile PF01145: SPFH domain / Band 7 family 4 3 25 6 At5g54150 expressed protein similar to unknown protein (pir||T05871) 4 3 25 7 At5g54330 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 4 3 25 8 At5g54390 "inositol monophosphatase family protein similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family; supporting cDNA gi|1354509|gb|U55205.1|ATU55205" 4 3 25 9 At5g57080 hypothetical protein 4 3 25 10 At5g57130 expressed protein 4 3 25 11 At5g57270 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 4 3 25 12 At5g57330 aldose 1-epimerase family protein contains Pfam profile PF01263 Aldose 1-epimerase 4 3 25 13 At5g57480 AAA-type ATPase family protein contains Pfam profile: PF00004 ATPase family 4 3 25 14 At5g57540 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase (XTR9) GI:4218963 from [Arabidopsis thaliana]" 4 3 25 15 At5g57670 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 25 16 At5g57720 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 4 3 25 17 At5g60280 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain, and PF00069: Protein kinase domain" 4 3 25 18 At5g60340 maoC-like dehydratase domain-containing protein contains similarity to (R)-specific enoyl-CoA hydratase PhaJ1 [Pseudomonas oleovorans] gi|22506675|gb|AAM97601; contains Pfam domain PF01575: MaoC like domain 4 3 25 19 At5g60480 "zinc finger homeobox family protein / ZF-HD homeobox family protein predicted proteins, Arabidopsis thaliana" 4 3 25 20 At5g60540 SNO glutamine amidotransferase family protein similar to pyridoxine synthesis protein PDX2 [Cercospora nicotianae] GI:9954418; contains Pfam profile PF01174: SNO glutamine amidotransferase family 4 3 25 21 At5g60670 "60S ribosomal protein L12 (RPL12C) 60S RIBOSOMAL PROTEIN L12 (like), Arabidopsis thaliana, PIR:T45883" 4 3 25 22 At5g60730 anion-transporting ATPase family protein low similarity to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase 4 3 25 23 At5g60890 "receptor-like protein kinase (ATR1) (MYB34) identical to receptor-like protein kinase(ATR1) GI:3150037 from [Arabidopsis thaliana]; contains PFAM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB34) mRNA, partial cds GI:3941443" 4 3 25 24 At5g60950 phytochelatin synthetase-related contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region 4 3 25 25 At5g63640 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate HRS isoform 2 [Homo sapiens] GI:9022389; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 4 3 26 1 At5g63700 "zinc finger (C3HC4 type RING finger) family protein contains Pfam PF03126: Plus-3 domain; contains Pfam PF02201: BAF60b domain of the SWIB complex; contains Pfam PF00628: PHD-finger domain; contains Prosite Zinc finger, C3HC4 type (RING finger), signature; similar to CPRF interacting protein (GI:9588690) [Petroselinum crispum]" 4 3 26 2 At5g63880 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 4 3 26 3 At5g63920 "DNA topoisomerase III alpha, putative similar to Swiss-Prot:Q9NG98 DNA topoisomerase III alpha [Drosophila melanogaster]" 4 3 26 4 At5g64080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 4 3 26 5 At5g64130 expressed protein 4 3 26 6 At5g64270 "splicing factor, putative similar to splicing factor 3B subunit 1 (Spliceosome associated protein 155) (SAP 155) (SF3b155) (Pre-mRNA splicing factor SF3b 155 kDa subunit) (146 kDa nuclear protein) SP:O57683 from [Xenopus laevis]" 4 3 26 7 At5g64330 "non-phototropic hypocotyl 3 (NPH3) identical to non-phototropic hypocotyl 3 [Arabidopsis thaliana] gi|6224712|gb|AAF05914, PMID:10542152" 4 3 26 8 At5g66730 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 4 3 26 9 At5g66790 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 3 26 10 At5g66940 Dof-type zinc finger domain-containing protein 4 3 26 11 At5g66990 RWP-RK domain-containing protein contains Pfam profile: PF02042 RWP-RK domain 4 3 26 12 At5g67160 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 4 3 26 13 At5g67200 "leucine-rich repeat transmembrane protein kinase, putative " 4 3 26 14 At5g67370 expressed protein similar to unknown protein (gb|AAC18972.1) 4 3 26 15 At5g67420 LOB domain protein 37 / lateral organ boundaries domain protein 37 (LBD37) identical to LOB DOMAIN 37 [Arabidopsis thaliana] GI:17227170 4 3 26 16 At3g42770 F-box family protein contains F-box domain Pfam:PF00646 4 3 26 17 At3g42820 hypothetical protein hypothetical proteins - Arabidopsis thaliana 4 3 26 18 At3g43150 hypothetical protein 4 3 26 19 At3g43210 kinesin motor family protein (NACK2) contains Pfam profile: PF00225 kinesin motor domain 4 3 26 20 At3g43410 hypothetical protein 4 3 26 21 At3g43470 hypothetical protein 4 3 26 22 At3g43660 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 4 3 26 23 At3g43710 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 4 3 26 24 Blank Blank 4 3 26 25 Blank Blank 4 4 1 1 atc04 Randomly generated negative control 4 4 1 2 atc10 Randomly generated negative control 4 4 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 4 4 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 4 4 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 4 4 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 4 4 1 7 atc08 Randomly generated negative control 4 4 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 4 4 1 9 At1g03610 expressed protein 4 4 1 10 At1g03680 "thioredoxin M-type 1, chloroplast (TRX-M1) nearly identical to SP|O48737 Thioredoxin M-type 1, chloroplast precursor (TRX-M1) {Arabidopsis thaliana}; similar to ESTs gb|T13714, gb|H76398, gb|N37762, gb|AA042639, gb|T21104, emb|Z30901" 4 4 1 11 At1g03820 expressed protein similar to arabinogalactan-protein; AGP (GI:1087015) {Pyrus communis}; similar to Protein E6. (SP:Q01197) {Gossypium hirsutum} 4 4 1 12 At1g03860 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 4 4 1 13 At1g04000 "expressed protein Location of ESTs 203I24T7, gb|H76794 and 203I24XP, gb|AA605510" 4 4 1 14 At1g04050 "SET domain-containing protein / suppressor of variegation related 1 (SUVR1) identical to suppressor of variegation related 1 [Arabidopsis thaliana] GI:15004614; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA trithorax 3 (ATX3) partial cds GI:15217142" 4 4 1 15 At1g04220 "beta-ketoacyl-CoA synthase, putative Strong similarity to beta-keto-Coa synthase gb|U37088 from Simmondsia chinensis, GI:4091810" 4 4 1 16 At1g04280 expressed protein 4 4 1 17 At1g06930 expressed protein ; expression supported by MPSS 4 4 1 18 At1g06980 expressed protein similar to hypothetical protein GI:2347189 from [Arabidopsis thaliana] 4 4 1 19 At1g07150 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 4 4 1 20 At1g07210 30S ribosomal protein S18 family contains Pfam profile: PF01084 ribosomal protein S18; similar to 30S ribosomal protein S18 (SP:P80382) {Thermus thermophilus} 4 4 1 21 At1g07350 "transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269 (1997))" 4 4 1 22 At1g07410 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB11C GI:1370146 from [Lotus japonicus]" 4 4 1 23 At1g07530 "scarecrow-like transcription factor 14 (SCL14) identical to GB:AAD24412 from [Arabidopsis thaliana] (Plant J. 18 (1), 111-119 (1999))" 4 4 1 24 At1g07590 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 4 4 1 25 At1g10060 "branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1) nearly identical to SP|Q93Y32 Branched-chain amino acid aminotransferase 1, mitochondrial precursor (EC 2.6.1.42) (Atbcat-1) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 4 4 2 1 At1g10110 "F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 4 4 2 2 At1g10300 GTP-binding protein-related contains similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4 from [Homo sapiens]; 4 4 2 3 At1g10340 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 4 4 2 4 At1g10510 leucine-rich repeat family protein similar to ribonuclease inhibitor (GI:164639) [Sus scrofa (pig)]; contains Pfam PF00560: Leucine Rich Repeat domains 4 4 2 5 At1g10560 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 4 4 2 6 At1g10660 expressed protein 4 4 2 7 At1g10710 hypothetical protein 4 4 2 8 At1g13410 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 4 2 9 At1g13470 expressed protein 4 4 2 10 At1g13635 methyladenine glycosylase family protein Contains Pfam profile PF03352: Methyladenine glycosylase 4 4 2 11 At1g13700 glucosamine/galactosamine-6-phosphate isomerase family protein similar to SP|O95336 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) {Homo sapiens}; contains Pfam profile PF01182: Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase 4 4 2 12 At1g13910 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0A [Lycopersicon esculentum] gi|3894385|gb|AAC78592" 4 4 2 13 At1g13960 WRKY family transcription factor similar to WKRY DNA-binding protein GB:AAD17441 4 4 2 14 At1g14150 oxygen evolving enhancer 3 (PsbQ) family protein extrinsic pII protein; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ) 4 4 2 15 At1g14190 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 4 4 2 16 At1g16810 expressed protein 4 4 2 17 At1g16840 expressed protein 4 4 2 18 At1g16980 "alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 4 4 2 19 At1g17050 "geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative similar to GI:11322965; Except for first 55 amino acids, 52% identical to Prenyl transferase (Cyanophora paradoxa) (gi 99282). Location of est 120E9T7 (gb|T43950)" 4 4 2 20 At1g17220 "translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris}" 4 4 2 21 At1g17280 "ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme 6 from [Homo sapiens] GI:14029267, [Mus musculus] GI:14029263; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 4 4 2 22 At1g17450 ATP phosphoribosyltransferase -related contains weak similarity to Swiss-Prot:P10366 ATP phosphoribosyltransferase [Escherichia coli] 4 4 2 23 At1g17500 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|O43520], Mus musculus [SP|P70704]; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 4 4 2 24 At1g20410 expressed protein 4 4 2 25 At1g20460 expressed protein 4 4 3 1 At1g20610 "cyclin, putative similar to G2/mitotic-specific cyclins (B-like cyclin) from {Medicago varia} SP|P46278, SP|P46277; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 4 4 3 2 At1g20650 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 4 4 3 3 At1g20810 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplast precursor (Ppiase) (Rotamase) (SP:Q9LM71)[Arabidopsis thaliana]; similar to SP|P25138 FK506-binding protein (Peptidyl-prolyl cis-trans isomerase) (PPiase) (EC 5.2.1.8) (Rotamase) {Neisseria meningitidis}; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 4 4 3 4 At1g20860 "phosphate transporter family protein similar to phosphate transporter [Catharanthus roseus] GI:2208908, inorganic phosphate transporter 1 [Solanum tuberosum] GI:1420871; contains Pfam profile PF00083: major facilitator superfamily protein" 4 4 3 5 At1g21030 "Ulp1 protease family protein similar to At5g44890, At2g29240, At1g08740, At1g08760; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 4 4 3 6 At1g21090 hydroxyproline-rich glycoprotein family protein 4 4 3 7 At1g23760 "BURP domain-containing protein / polygalacturonase, putative similar to polygalacturonase isoenzyme 1 beta subunit [Lycopersicon esculentum] GI:170480; contains Pfam profile PF03181: BURP domain" 4 4 3 8 At1g23820 spermidine synthase 1 (SPDSYN1) / putrescine aminopropyltransferase 1 identical to SP|Q9ZUB3 Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) {Arabidopsis thaliana} 4 4 3 9 At1g23950 expressed protein 4 4 3 10 At1g24000 Bet v I allergen family protein contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 4 4 3 11 At1g24160 expressed protein Location of EST gb|H36355 4 4 3 12 At1g24220 paired amphipathic helix repeat-containing protein weak similarity to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 4 4 3 13 At1g24350 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 4 4 3 14 At1g24420 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna][GI:6166330][PMID:10588064]" 4 4 3 15 At1g28110 "serine carboxypeptidase S10 family protein similar to H.vulgare gene encoding serine carboxypeptidase II, CP-MII GI:1731989" 4 4 3 16 At1g28140 expressed protein contains similarity to cytochrome oxidase I GI:1289267 from (Xantholinus sp.) 4 4 3 17 At1g28310 Dof-type zinc finger domain-containing protein 4 4 3 18 At1g28330 "dormancy-associated protein, putative (DRM1) identical to dormancy-associated protein [Arabidopsis thaliana] GI:2995990; similar to dormancy-associated protein GI:2605887 from [Pisum sativum]; contains Pfam profile PF05564: Dormancy/auxin associated protein" 4 4 3 19 At1g28460 MADS-box family protein contains similarity to MADS-box transcription factor GI:6580947 from [Picea abies] 4 4 3 20 At1g28520 expressed protein 4 4 3 21 At1g28650 "lipase, putative strong similarity to lipase [Arabidopsis thaliana] GI:1145627" 4 4 3 22 At1g28695 expressed protein ; expression supported by MPSS 4 4 3 23 At1g31840 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR domains: Pfam profile: PF01535: PPR repeat 4 4 3 24 At1g31910 GHMP kinase family protein contains TIGRFAM profile TIGR01219: phosphomevalonate kinase; contains Pfam PF00288: GHMP kinases putative ATP-binding protein domain; similar to Phosphomevalonate kinase (EC 2.7.4.2) (Swiss-Prot:P24521) [Saccharomyces cerevisiae] 4 4 3 25 At1g32100 "pinoresinol-lariciresinol reductase, putative similar to pinoresinol-lariciresinol reductase TH1 [Tsuga heterophylla][GI:7578915]; contains isoflavone reductase domain PF02716" 4 4 4 1 At1g32170 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (XTR4) identical to N-terminal partial sequence of xyloglucan endotransglycosylase-related protein XTR4 GI:1244754 from [Arabidopsis thaliana]; similar to endoxyloglucan transferase [Arabidopsis thaliana] GI:5533311" 4 4 4 2 At1g32330 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 4 4 4 3 At1g32370 tobamovirus multiplication protein 2B (TOM2B) identical to tobamovirus multiplication 2B [Arabidopsis thaliana] gi|32698522|dbj|BAC24020; PMID: 12514139 4 4 4 4 At1g32490 "RNA helicase, putative similar to ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 4 4 4 5 At1g32540 "zinc finger protein, putative similar to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660" 4 4 4 6 At1g36230 hypothetical protein 4 4 4 7 At1g36370 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 4 4 4 8 At1g36940 hypothetical protein 4 4 4 9 At1g37000 hypothetical protein 4 4 4 10 At1g38950 hypothetical protein 4 4 4 11 At1g40125 hypothetical protein member of hypothetical protein common family 4 4 4 12 At1g42190 hypothetical protein 4 4 4 13 At1g42440 "expressed protein contains Pfam domain, PF04950: Protein of unknown function (DUF663)" 4 4 4 14 At1g48330 expressed protein similar to hypothetical protein GI:9294146 from [Arabidopsis thaliana] 4 4 4 15 At1g48400 F-box family protein contains F-box domain Pfam:PF00646 4 4 4 16 At1g48570 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 4 4 4 17 At1g48610 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 4 4 4 18 At1g48770 hypothetical protein 4 4 4 19 At1g48830 40S ribosomal protein S7 (RPS7A) similar to 40S ribosomal protein S7 homolog GI:5532505 from [Brassica oleracea] 4 4 4 20 At1g49010 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 4 4 4 21 At1g49050 aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease; contains similarity to nucellin GI:2290203 from [Hordeum vulgare] 4 4 4 22 At1g52050 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 4 4 4 23 At1g52100 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain; contains non-consensus AG donor splice site at exon3 4 4 4 24 At1g52280 "Ras-related GTP-binding protein, putative similar to RAB7D GI:1370187 from [Lotus japonicus] (Plant J. 11 (2), 237-250 (1997)); contains Pfam PF00071: Ras family" 4 4 4 25 At1g52320 expressed protein contains Pfam profile: PF04782 protein of unknown function (DUF632) 4 4 5 1 At1g52470 hypothetical protein 4 4 5 2 At1g52510 "hydrolase, alpha/beta fold family protein low similarity to SP|P22643 Haloalkane dehalogenase (EC 3.8.1.5) {Xanthobacter autotrophicus}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 4 5 3 At1g52680 "late embryogenesis abundant protein-related / LEA protein-related low similarity to late embryogenesis abundant proteins from [Brassica napus] SP|P13934, [Cicer arietinum] GI:2909420" 4 4 5 4 At1g52730 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to UNR-interacting protein (WD-40 repeat protein PT-WD) (SP:Q9Y3F4) [Homo sapiens] 4 4 5 5 At1g55370 expressed protein 4 4 5 6 At1g55430 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 4 4 5 7 At1g55560 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 4 4 5 8 At1g55620 "voltage-gated chloride channel family protein contains Pfam profiles PF00654: Voltage gated chloride channel, PF00571: CBS domain" 4 4 5 9 At1g55780 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 4 4 5 10 At1g55830 expressed protein similar to M-type 9 protein (GI:507127) [Streptococcus pyogenes] 4 4 5 11 At1g55980 expressed protein 4 4 5 12 At1g56020 expressed protein 4 4 5 13 At1g60710 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 4 4 5 14 At1g60770 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 4 4 5 15 At1g60940 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK1 from [Arabidopsis thaliana], SWISS-PROT:P43291" 4 4 5 16 At1g60987 expressed protein 4 4 5 17 At1g61120 terpene synthase/cyclase family protein similar to S-linalool synthase GI:1491939 from [Clarkia breweri][PMID: 8768373] 4 4 5 18 At1g61180 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 4 4 5 19 At1g61360 "S-locus lectin protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954" 4 4 5 20 At1g61420 "S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding)" 4 4 5 21 At1g64170 "cation/hydrogen exchanger, putative (CHX16) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 4 4 5 22 At1g64220 preprotein translocase-related similar to TOM7 protein [Solanum tuberosum] GI:3319774 4 4 5 23 At1g64385 expressed protein 4 4 5 24 At1g64440 "UDP-glucose 4-epimerase, putative / UDP-galactose 4-epimerase, putative / Galactowaldenase, putative similar to UDP-galactose 4-epimerase from Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba GI:3021357 [AJ005082] (Plant Sci. 142, 147-154 (1999))" 4 4 5 25 At1g64620 Dof-type zinc finger domain-containing protein similar to Dof zinc finger protein GB:CAA08755 GI:3341468 from [Nicotiana tabacum] 4 4 6 1 At1g64670 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas putida] GI:2822275; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 4 6 2 At1g64840 F-box family protein contains Pfam:PF00646 F-box domain 4 4 6 3 At1g64900 "cytochrome P450, putative similar to cytochrome p450 GI:438240 from [Solanum melongena]" 4 4 6 4 At1g67700 expressed protein 4 4 6 5 At1g67740 "photosystem II core complex proteins psbY, chloroplast (PSBY) / L-arginine metabolising enzyme identical to SP:O49347 Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine metabolising enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] [Arabidopsis thaliana]" 4 4 6 6 At1g67860 expressed protein 4 4 6 7 At1g67910 expressed protein 4 4 6 8 At1g68040 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292], S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase [Clarkia breweri][GI:6002712]" 4 4 6 9 At1g68100 "IAA-alanine resistance protein 1, putative similar to IAA-alanine resistance protein 1 [Arabidopsis thaliana] SWISS-PROT:Q9M647; contains ZIP Zinc transporter domain, Pfam:PF02535; identical to cDNA IAA-alanine resistance protein 1 mRNA GI:6942042" 4 4 6 10 At1g68270 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501 4 4 6 11 At1g68330 expressed protein 4 4 6 12 At1g70985 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 4 4 6 13 At1g71030 myb family transcription factor similar to MybHv5 GI:19055 from [Hordeum vulgare] 4 4 6 14 At1g71210 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 6 15 At1g71260 expressed protein 4 4 6 16 At1g71420 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 6 17 At1g71480 "nuclear transport factor 2 (NTF2) family protein contains Pfam domain, PF02136: Nuclear transport factor 2 (NTF2) domain" 4 4 6 18 At1g71720 "S1 RNA-binding domain-containing protein contains Pfam domain, PF00575: S1 RNA binding domain" 4 4 6 19 At1g71780 expressed protein 4 4 6 20 At1g74520 ABA-responsive protein (HVA22a) identical to AtHVA22a [Arabidopsis thaliana] GI:4884932 4 4 6 21 At1g74560 nucleosome assembly protein (NAP) family protein similar to SP|Q01105 SET protein (HLA-DR associated protein II) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) {Homo sapiens}; contains Pfam profile: PF00956 nucleosome assembly protein (NAP) 4 4 6 22 At1g74760 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 4 4 6 23 At1g74820 cupin family protein similar to germin-like protein SP|P92995; contains Pfam profile PF00190: Cupin 4 4 6 24 At1g74990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 4 4 6 25 At1g75050 "thaumatin-like protein, putative / pathogenesis-related protein, putative similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406, SP|P28493 Pathogenesis-related protein 5 precursor (PR-5) {Arabidopsis thaliana}; contains Pfam profile: PF00314 Thaumatin family" 4 4 7 1 At1g75210 5' nucleotidase family protein contains Pfam profile: PF05761 5' nucleotidase family 4 4 7 2 At1g75260 isoflavone reductase family protein similar to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: Isoflavone reductase 4 4 7 3 AT5G57480 PC-1 D09 4 4 7 4 3XSSC PC-1 D21 4 4 7 5 AT1G29930 PC-1 H09 4 4 7 6 3XSSC PC-1 H21 4 4 7 7 AT3G44150 PC-1 L09 4 4 7 8 3XSSC PC-1 L21 4 4 7 9 AT4G00810 PC-1 P09 4 4 7 10 3XSSC PC-1 P21 4 4 7 11 At1g77990 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:1498120 4 4 7 12 At1g78050 phosphoglycerate/bisphosphoglycerate mutase family protein similar to SP|P31217 Phosphoglycerate mutase 1 (EC 5.4.2.1) {Escherichia coli O157:H7}; contains Pfam profile PF00300: phosphoglycerate mutase family 4 4 7 13 At1g78200 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GB:CAA72341 [Medicago sativa]; contains Pfam profile: PF00481 Protein phosphatase 2C" 4 4 7 14 At1g78260 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif-containing protein SEB-4 GI:8895698 from [Xenopus laevis]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 4 7 15 At1g78440 gibberellin 2-oxidase / GA2-oxidase (GA2OX1) identical to gibberellin 2- oxidase ga2ox1 [GI:4678366] from [Arabidopsis thaliana] 4 4 7 16 At1g78500 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase (04C11) [gi:6650208] [PMID:11247608]; similar to beta-Amyrin Synthase GI:3688600 from [Panax ginseng]" 4 4 7 17 At1g78660 "gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana}" 4 4 7 18 At1g78700 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 4 4 7 19 At2g01260 expressed protein 4 4 7 20 At2g01310 expressed protein 4 4 7 21 At2g01460 phosphoribulokinase/uridine kinase family protein contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family 4 4 7 22 At2g01510 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 7 23 At2g01680 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 4 4 7 24 At2g01735 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger) domain" 4 4 7 25 At2g01900 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 4 4 8 1 At2g01940 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 4 4 8 2 At2g05160 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 4 8 3 At2g05230 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 4 4 8 4 At2g05440 glycine-rich protein 4 4 8 5 At2g05530 glycine-rich protein 4 4 8 6 At2g05755 integral membrane family protein contains Pfam PF00892: Integral membrane protein domain 4 4 8 7 At2g05830 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to CIG2 [Nicotiana tabacum] GI:15216226, IDI2 [Hordeum vulgare subsp. vulgare] GI:12407304; weak similarity to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family" 4 4 8 8 At2g06005 expressed protein 4 4 8 9 At2g06030 expressed protein 4 4 8 10 At2g14210 "MADS-box protein (ANR1) identical to ANR1, MADS-box protein [Arabidopsis thaliana] GI:2959320" 4 4 8 11 At2g14260 proline iminopeptidase identical to GP:1710151:U72711 4 4 8 12 At2g14580 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 4 4 8 13 At2g14635 expressed protein 4 4 8 14 At2g14810 hypothetical protein 4 4 8 15 At2g14850 expressed protein 4 4 8 16 At2g15045 hypothetical protein 4 4 8 17 At2g15080 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 4 4 8 18 At2g18120 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 4 4 8 19 At2g18180 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminussimilar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus];" 4 4 8 20 At2g18300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain ;supported by cDNA gi|20127067|gb|AF488597.1| 4 4 8 21 At2g18360 "hydrolase, alpha/beta fold family protein low similarity to SP|P24640|LIP3_MORSP Lipase 3 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Moraxella sp}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 4 4 8 22 At2g18520 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 4 4 8 23 At2g18590 "transporter-related low similarity to spinster membrane proteins from [Drosophila melanogaster] GI:12003976, GI:12003972, GI:12003974, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein" 4 4 8 24 At2g18770 expressed protein 4 4 8 25 At2g18840 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 4 4 9 1 At2g21480 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 4 9 2 At2g21540 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 4 4 9 3 At2g21720 hypothetical protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 4 4 9 4 At2g21790 "ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative similar to ribonucleotide reductase GI:4151068 from [Nicotiana tabacum]" 4 4 9 5 At2g21940 "shikimate kinase, putative similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202" 4 4 9 6 At2g21990 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 4 4 9 7 At2g22180 hydroxyproline-rich glycoprotein family protein 4 4 9 8 At2g22250 "aminotransferase class I and II family protein similar to aspartate aminotransferase from Bacillus stearothermophilus SP|Q59228, Thermus aquaticus SP|O33822; contains Pfam profile PF00155 aminotransferase, classes I and II" 4 4 9 9 At2g25140 "heat shock protein 100, putative / HSP100, putative / heat shock protein clpB, putative / HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530 [Phaseolus lunatus]" 4 4 9 10 At2g25200 expressed protein 4 4 9 11 At2g25360 zinc finger protein-related contains weak similarity to zinc finger proteins and Pfam PF01485: IBR domain 4 4 9 12 At2g25440 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to NL0E [Lycopersicon esculentum] gi|4235643|gb|AAD13303" 4 4 9 13 At2g25610 "H+-transporting two-sector ATPase, C subunit family protein similar to SP|P23968 Vacuolar ATP synthase 22 kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces cerevisiae}; contains Pfam profile PF00137: ATP synthase subunit C" 4 4 9 14 At2g25640 transcription elongation factor-related contains weak similarity to transcription elongation factors 4 4 9 15 At2g25790 "leucine-rich repeat transmembrane protein kinase, putative " 4 4 9 16 At2g25840 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 4 4 9 17 At2g28470 "beta-galactosidase, putative / lactase, putative similar to Beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 4 4 9 18 At2g28530 RNA recognition motif (RRM)-containing protein similar to SP|P34909 General negative regulator of transcription subunit 4 {Saccharomyces cerevisiae}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 4 9 19 At2g28670 disease resistance-responsive family protein / fibroin-related contains similarity to silk fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861; contains disease resistance response protien domain Pfam:FP03018 4 4 9 20 At2g28725 hypothetical protein 4 4 9 21 At2g28900 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 4 4 9 22 At2g28960 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 4 4 9 23 At2g29140 pumilio/Puf RNA-binding domain-containing protein 4 4 9 24 At2g29210 splicing factor PWI domain-containing protein contains Pfam profile PF01480: PWI domain 4 4 9 25 At2g31870 "poly (ADP-ribose) glycohydrolase (PARG) family protein similar to poly(ADP-ribose) glycohydrolase [Bos taurus] GI:2062407; contains Pfam domain, PF05028: poly (ADP-ribose) glycohydrolase (PARG)" 4 4 10 1 At2g31930 expressed protein 4 4 10 2 At2g32090 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 4 4 10 3 At2g32140 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 4 4 10 4 At2g32280 expressed protein 4 4 10 5 At2g32330 expressed protein contains Pfam profile: PF04446 family of unknown function (DUF549) 4 4 10 6 At2g32490 3'-5' exonuclease domain-containing protein contains Pfam profile PF01612: 3'-5' exonuclease 4 4 10 7 At2g32550 "rcd1-like cell differentiation family protein weak similarity to protein involved in sexual development [Schizosaccharomyces pombe] GI:1620896; contains Pfam profile PF04078: Cell differentiation family, Rcd1-like" 4 4 10 8 At2g35130 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 10 9 At2g35190 novel plant SNARE 11 (NPSN11) contains 1 transmembrane domain; identical to Novel plant SNARE 11 (AtNPSN11) (Swiss-Prot:Q944A9) [Arabidopsis thaliana] 4 4 10 10 At2g35350 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 4 4 10 11 At2g35410 "33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to SP|P19684 33 kDa ribonucleoprotein, chloroplast precursor {Nicotiana sylvestris}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 4 4 10 12 At2g35580 "serpin family protein / serine protease inhibitor family protein similar to protein zx [Hordeum vulgare subsp. vulgare] GI:19071, serpin [Triticum aestivum] GI:1885350; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 4 4 10 13 At2g35615 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 4 4 10 14 At2g35736 expressed protein ; expression supported by MPSS 4 4 10 15 At2g35790 expressed protein 4 4 10 16 At2g38380 "peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E identical to SP|P24102 Peroxidase 22 precursor (EC 1.11.1.7) (Atperox P22) (ATPEa) (Basic peroxidase E) {Arabidopsis thaliana}; identical to cDNA class III peroxidase ATPEa, GI:17530569" 4 4 10 17 At2g38440 expressed protein 4 4 10 18 At2g38620 "cell divsion control protein, putative similar to SWISS-PROT:P25859 cell division control protein 2 homolog B [Arabidopsis thaliana]; contains protein kinase domain, Pfam:PF00069" 4 4 10 19 At2g38680 pyrimidine 5'-nucleotidase family protein / uridine monophosphate hydrolase-1 (UMPH-1) family protein similar to pyrimidine 5'-nucleotidase [Homo sapiens] GI:11245474; contains Pfam profile PF05822: Pyrimidine 5'-nucleotidase (UMPH-1) 4 4 10 20 At2g38820 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 4 4 10 21 At2g38860 "proteaseI (pfpI)-like protein (YLS5) contains Pfam profile PF01965: DJ-1/PfpI family; supporting cDNA gi|13122287|dbj|AB047808.1|; identical to proteaseI (pfpI)-like protein [Arabidopsis thaliana] GI:13122288, cDNA proteaseI (pfpI)-like protein GI:13122287" 4 4 10 22 At2g39000 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 4 4 10 23 At2g39040 "peroxidase, putative similar to cationic peroxidase isozyme 38K precursor [Nicotiana tabacum] gi|575603|dbj|BAA07663" 4 4 10 24 At2g41570 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 4 4 10 25 At2g41620 nucleoporin interacting component family protein contains Pfam profile PF04097: Nucleoporin interacting component 4 4 11 1 At2g41750 "DTW domain-containing protein contains Pfam domain, PF03942: DTW domain" 4 4 11 2 At2g41810 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 4 4 11 3 At2g41950 expressed protein 4 4 11 4 At2g42005 amino acid transporter family protein low similarity to proton/amino acid transporter 1 [Mus musculus] GI:21908024; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 4 4 11 5 At2g42160 zinc finger (ubiquitin-hydrolase) domain-containing protein similar to BRCA1-associated protein 2 [Homo sapiens] GI:3252872; contains Pfam profile PF02148: Zn-finger in ubiquitin-hydrolases and other protein 4 4 11 6 At2g42210 "mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to SP|P25710 NADH-ubiquinone oxidoreductase 21.3 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) {Neurospora crassa}, SP|Q12328 Mitochondrial import inner membrane translocase subunit TIM22 {Saccharomyces cerevisiae}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17" 4 4 11 7 At2g44820 expressed protein 4 4 11 8 At2g44880 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 11 9 At2g45010 "expressed protein weak similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 4 4 11 10 At2g45080 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 4 4 11 11 At2g45260 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 4 4 11 12 At2g45320 expressed protein 4 4 11 13 At2g45510 "cytochrome P450, putative " 4 4 11 14 At2g45560 cytochrome P450 family protein 4 4 11 15 At2g48160 PWWP domain-containing protein 4 4 11 16 At2g19340 "membrane protein, putative contains 3 transmembrane domains;" 4 4 11 17 At3g01140 myb family transcription factor (MYB106) similar to transforming protein (myb) homolog GB:S26605 from [Petunia x hybrida] 4 4 11 18 At3g01185 hypothetical protein 4 4 11 19 At3g01340 protein transport protein SEC13 family protein / WD-40 repeat family protein similar to Protein transport protein SEC13 SP|Q04491 {Saccharomyces cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris] 4 4 11 20 At3g01390 "vacuolar ATP synthase subunit G 1 (VATG1) / V-ATPase G subunit 1 (VAG1) / vacuolar proton pump G subunit 1 (VMA10) identical to SWISS-PROT:O82628 vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1, Vacuolar proton pump G subunit 1) [Arabidopsis thaliana]" 4 4 11 21 At3g01516 expressed protein 4 4 11 22 At3g01570 glycine-rich protein / oleosin similar to oleosin GB:AAB58402 [Sesamum indicum] 4 4 11 23 At3g04160 expressed protein ; expression supported by MPSS 4 4 11 24 At3g04220 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 4 4 11 25 At3g04380 "SET domain-containing protein (SUVR4) nearly identical to Su(VAR)3-9-related protein 4 [Arabidopsis thaliana] GI:17066863; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4) GI:17066862, which is an SET domain protein similar to Drosophila SU(VAR)3-9" 4 4 12 1 At3g04430 no apical meristem (NAM) family protein similar to CUC1 (GP:12060422) {Arabidopsis thaliana} 4 4 12 2 At3g04590 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 4 4 12 3 At3g04630 expressed protein 4 4 12 4 At3g04780 expressed protein 4 4 12 5 At3g04820 expressed protein contains PFam profile PF01142: Uncharacterized protein family UPF0024; expression supported by MPSS 4 4 12 6 At3g07340 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 4 4 12 7 At3g07390 auxin-responsive protein / auxin-induced protein (AIR12) identical (with 7 residue gap) to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana] 4 4 12 8 At3g07525 "autophagocytosis-associated family protein contains autophagocytosis associated protein C-terminal domain, Pfam:PF03987" 4 4 12 9 At3g07565 expressed protein 4 4 12 10 At3g07730 expressed protein 4 4 12 11 At3g07760 expressed protein 4 4 12 12 At3g07920 "eukaryotic translation initiation factor 2 subunit 2, putative / eIF-2-beta, putative similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5" 4 4 12 13 At3g07950 rhomboid protein-related contains 6 transmembrane domains; similar to phosphatidyl inositol glycan class T (GI:14456615) [Homo sapiens] 4 4 12 14 At3g10915 "reticulon family protein low similarity to rS-Rex-s [Rattus norvegicus] GI:1143717, neuroendocrine-specific protein C [Homo sapiens] GI:307311; contains Pfam profile PF02453: Reticulon" 4 4 12 15 At3g10970 haloacid dehalogenase-like hydrolase family protein low similarity to genetic modifier [Zea mays] GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 4 4 12 16 At3g11100 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 4 4 12 17 At3g11170 "omega-3 fatty acid desaturase, chloroplast (FAD7) (FADD) identical to omega-3 fatty acid desaturase, chloroplast precursor SP:P46310 [Arabidopsis thaliana (Mouse-ear cress)]; identical to Pfam profile PF00487: Fatty acid desaturase; identical to cDNA plastid fatty acid desaturase GI:809491" 4 4 12 18 At3g11325 hypothetical protein 4 4 12 19 At3g11385 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 4 4 12 20 At3g11510 40S ribosomal protein S14 (RPS14B) similar to 40S ribosomal protein S14 GB:P19950 [Zea mays] 4 4 12 21 At3g11550 integral membrane family protein similar to unknown protein GB:AAD26967 [Arabidopsis thaliana]; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 4 4 12 22 At3g13940 expressed protein weak similarity to DNA-directed RNA polymerase I 49 kDa polypeptide (EC 2.7.7.6) (A49) (Swiss-Prot:O14086) [Schizosaccharomyces pombe]; similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus norvegicus] 4 4 12 23 At3g14000 expressed protein 4 4 12 24 At3g14120 expressed protein similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus norvegicus] 4 4 12 25 At3g14160 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to alkB protein [Caulobacter crescentus][GI:2055386]; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 4 4 13 1 At3g14290 20S proteasome alpha subunit E2 (PAE2) identical to 20S proteasome subunit PAE2 GB:AAC32061 from [Arabidopsis thaliana] 4 4 13 2 At3g14350 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase 1 GB:AAC27894 from [Zea mays]" 4 4 13 3 At3g14500 hypothetical protein 4 4 13 4 At3g14560 expressed protein 4 4 13 5 At3g17120 expressed protein 4 4 13 6 At3g17180 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase II SP:P08819 [Triticum aestivum] (Carlsberg Res. Commun. 52:297-311(1987)) 4 4 13 7 At3g17310 methyltransferase family protein similar to cytosine methyltransferase (GI:7658293) [Arabidopsis thaliana] 4 4 13 8 At3g17365 expressed protein low similarity to PIR|I46078 endothelin converting enzyme from Bos primigenius taurus 4 4 13 9 At3g17510 CBL-interacting protein kinase 1 (CIPK1) identical to CBL-interacting protein kinase 1 [Arabidopsis thaliana] gi|11066952|gb|AAG28776; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 1 (CIPK1) GI:11066951 4 4 13 10 At3g17570 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 4 4 13 11 At3g17710 F-box family protein contains F-box domain Pfam:PF00646 4 4 13 12 At3g17770 "dihydroxyacetone kinase family protein contains Pfam domains, PF02733: DAK1 domain and PF02734: DAK2 domain" 4 4 13 13 At3g20410 calmodulin-domain protein kinase isoform 9 (CPK9) identical to calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|1399265|gb|AAB03242 4 4 13 14 At3g20475 DNA mismatch repair MutS family protein similar to SP|O43196 MutS protein homolog 5 {Homo sapiens}; contains Pfam profile PF00488: MutS domain V 4 4 13 15 At3g20640 ethylene-responsive protein -related contains similarity to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413 4 4 13 16 At3g20700 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 4 4 13 17 At3g20860 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 4 4 13 18 At3g20910 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 4 4 13 19 At3g21140 expressed protein 4 4 13 20 At3g21175 zinc finger (GATA type) family protein similar to zinc finger protein ZIM gi:8918533 from [Arabidopsis thaliana]; contains Pfam PF00320: GATA zinc finger 4 4 13 21 At3g23870 "permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains 9 predicted transmembrane domains; contains Pfam PF05653: Protein of unknown function (DUF803); identified as COG0697, Permeases of the drug/metabolite transporter (DMT) superfamily" 4 4 13 22 At3g23930 expressed protein 4 4 13 23 At3g24100 four F5 family protein / 4F5 family protein contains Pfam PF04419: 4F5 protein family 4 4 13 24 At3g24140 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 Helix-loop-helix DNA-binding domain 4 4 13 25 At3g24300 "ammonium transporter 1, member 3 (AMT1.3) nearly identical to SP|Q9SQH9|AT13_ARATH Ammonium transporter 1, member 3 (AtAMT1;3) {Arabidopsis thaliana}" 4 4 14 1 At3g24350 "syntaxin, putative (SYP32) similar to SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis thaliana}, syntaxin 5A GB:NP_003155 from [Homo sapiens] (J. Mol. Neurosci. (1997) 8 (2), 159-161)" 4 4 14 2 At3g24517 hypothetical protein 4 4 14 3 At3g24560 expressed protein contains Pfam profile PF01171: PP-loop family 4 4 14 4 At3g27320 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 4 4 14 5 At3g27370 hypothetical protein 4 4 14 6 At3g27530 "vesicle tethering family protein contains Pfam PF04869: Uso1 / p115 like vesicle tethering protein, head region and PF04871: Uso1 / p115 like vesicle tethering protein, C terminal region" 4 4 14 7 At3g27590 hypothetical protein 4 4 14 8 At3g27785 myb family transcription factor (MYB118) contains PFAM profile: PF00249 myb-like DNA binding domain 4 4 14 9 At3g27850 "50S ribosomal protein L12-3, chloroplast (CL12-C) identical to ribosomal protein L12 GB:X68046 [Arabidopsis thaliana] (J. Biol. Chem. 269 (10), 7330-7336 (1994))" 4 4 14 10 At3g28020 hypothetical protein 4 4 14 11 At3g28080 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 4 4 14 12 At3g32280 hypothetical protein 4 4 14 13 At3g32902 hypothetical protein 4 4 14 14 At3g33530 "transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 11 (SP:Q9BZH6) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 3 weak)|2763187|gb|T46504.1|T46504" 4 4 14 15 At3g42070 hypothetical protein 4 4 14 16 At3g42254 hypothetical protein 4 4 14 17 At3g42350 hypothetical protein 4 4 14 18 At3g42556 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 4 4 14 19 At3g42610 hypothetical protein 4 4 14 20 At3g45720 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 4 14 21 At3g45770 "oxidoreductase, zinc-binding dehydrogenase family protein similar to nuclear receptor binding factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724; contains Pfam zinc-binding dehydrogenase domain PF00107" 4 4 14 22 At3g45940 "alpha-xylosidase, putative strong similarity to alpha-xylosidase precursor GI:4163997 from [Arabidopsis thaliana]" 4 4 14 23 At3g46000 "actin-depolymerizing factor, putative (ADF2) strong similarity to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 4 4 14 24 At3g46180 UDP-galactose/UDP-glucose transporter-related contains weak similarity to UDP-galactose/UDP-glucose transporter (GI:22651763) [Arabidopsis thaliana] 4 4 14 25 At3g46240 protein kinase-related similar to light repressible receptor protein kinase (GI:1321686) [Arabidopsis thaliana] 4 4 15 1 At3g46430 expressed protein 4 4 15 2 At3g46490 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to hyoscyamine 6 beta-hydroxylase from Atropa belladonna [GI:4996123] and Hyoscyamus niger [SP|P24397], gibberellin 20-oxidase [GI:9791186]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 4 4 15 3 At3g49280 hypothetical protein 4 4 15 4 At3g49320 expressed protein contains Pfam profile PF03690: Uncharacterised protein family (UPF0160) 4 4 15 5 At3g49500 RNA-dependent RNA polymerase (SDE1) identical to RNA-dependent RNA polymerase [Arabidopsis thaliana] gi|8248473|gb|AAF74208 4 4 15 6 At3g49560 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 4 4 15 7 At3g49740 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 4 15 8 At3g49800 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 4 4 15 9 At3g49980 "F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 4 4 15 10 At3g50040 "expressed protein putative protein - Arabidopsis thaliana, EMBL:AL035601" 4 4 15 11 At3g52720 carbonic anhydrase family protein low similarity to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 4 4 15 12 At3g52780 purple acid phosphatase (PAP20) identical to purple acid phosphatase GI:20257491 from [Arabidopsis thaliana] 4 4 15 13 At3g52920 expressed protein weak similarity to enterophilin-2L [Cavia porcellus] GI:12718845; contains Pfam profile PF04949: Family of unknown function (DUF662) 4 4 15 14 At3g52960 "peroxiredoxin type 2, putative similar to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] GI:4928472; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 4 4 15 15 At3g53140 "O-diphenol-O-methyl transferase, putative similar to GI:6688808 [Medicago sativa subsp. x varia], caffeic acid O-methyltransferase (homt1), Populus kitakamiensis, EMBL:PKHOMT1A" 4 4 15 16 At3g53200 myb family transcription factor (MYB27) similar to myb-related DNA-binding protein GI:6467223 from [Arabidopsis thaliana]; contains PFAM profile: myb DNA binding domain PF00249 4 4 15 17 At3g53340 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 4 4 15 18 At3g53390 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to Dystrophia myotonica-containing WD repeat motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274) [Mus musculus]; simlar to DMR protein GI:18028289 [Homo sapiens]; 4 4 15 19 At3g55990 expressed protein contains Pfam profile PF03005: Arabidopsis proteins of unknown function 4 4 15 20 At3g56050 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 4 4 15 21 At3g56210 expressed protein 4 4 15 22 At3g56270 expressed protein contains Pfam PF05701: Plant protein of unknown function (DUF827) 4 4 15 23 At3g56450 "alpha-soluble NSF attachment protein 1 / alpha-SNAP1 (ASNAP1) identical to alpha-soluble NSF attachment protein 1 (Alpha-SNAP1) (N- ethylmaleimide-sensitive factor attachment protein, alpha 1) (Swiss-Prot:Q9LXZ5) [Arabidopsis thaliana]" 4 4 15 24 At3g56510 "TBP-binding protein, putative similar to TBP-binding protein ABT1 GI:6518527 from [Mus musculus]" 4 4 15 25 At3g56690 calmodulin-binding protein identical to calmodulin-binding protein GI:6760428 from [Arabidopsis thaliana] 4 4 16 1 At3g56750 expressed protein 4 4 16 2 At3g59570 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 4 4 16 3 At3g59630 diphthamide synthesis DPH2 family protein contains InterPro accession IPR002728: Diphthamide synthesis DPH2 protein 4 4 16 4 At3g59780 expressed protein 4 4 16 5 At3g59840 expressed protein 4 4 16 6 At3g59980 tRNA-binding region domain-containing protein similar to SP|O54873 Multisynthetase complex auxiliary component p43 [Contains: Endothelial-monocyte activating polypeptide II (EMAP-II) (Small inducible cytokine subfamily E member 1)] {Cricetulus griseus}; contains Pfam profile PF01588: Putative tRNA binding domain 4 4 16 7 At3g60040 F-box family protein contains a novel domain with similarity to F-box domain; 4 4 16 8 At3g60210 "chloroplast chaperonin 10, putative similar to chloroplast chaperonin 10 GI:14041813 from [Arabidopsis thaliana]" 4 4 16 9 At3g60260 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 4 4 16 10 At3g62990 "expressed protein predicted protein, Arabidopsis thaliana" 4 4 16 11 At3g63050 expressed protein 4 4 16 12 At3g63220 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 4 4 16 13 At3g63260 "protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 4 4 16 14 At3g63400 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9" 4 4 16 15 At3g63420 heterotrimeric G protein gamma-subunit (AGG1) 4 4 16 16 At4g00050 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 4 4 16 17 At4g00110 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 4 4 16 18 At4g02465 hypothetical protein 4 4 16 19 At4g02520 "glutathione S-transferase, putative " 4 4 16 20 At4g02670 "zinc finger (C2H2 type) family protein similar to potato PCP1 zinc finger protein, GenBank accession number X82328 contains Pfam domain, PF00096: Zinc finger, C2H2 type" 4 4 16 21 At4g02720 expressed protein temporary automated functional assignment 4 4 16 22 At4g02890 "polyubiquitin (UBQ14) identical to GI:166795; similar to N. sylvestris hexameric polyubiquitin, GenBank accession number M74101" 4 4 16 23 At4g02930 "elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511" 4 4 16 24 At4g03110 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327, CUG-BP and ETR-3 like factor 3 [Homo sapiens] GI:12746392; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 4 4 16 25 At4g03150 expressed protein 4 4 17 1 At4g07932 hypothetical protein 4 4 17 2 At4g07965 hypothetical protein 4 4 17 3 At4g08180 "oxysterol-binding family protein similar to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 4 4 17 4 At4g08240 expressed protein 4 4 17 5 At4g08390 "L-ascorbate peroxidase, stromal (sAPX) identical to stromal ascorbate peroxidase [Arabidopsis thaliana] gi|1419388|emb|CAA67425" 4 4 17 6 At4g08455 BTB/POZ domain-containing protein Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56 protein (GI:17483747) [Mus musculus] 4 4 17 7 At4g08640 "hypothetical protein low similarity to chaperonin-containing-TCP1 theta subunit from Tetrahymena pyriformis [GI:4959731], Homo sapiens [SP|P50990]" 4 4 17 8 At4g08700 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 4 4 17 9 At4g11530 protein kinase family protein contains Pfam PF00069: Protein kinase domain 4 4 17 10 At4g11590 F-box family protein contains weak hit to Pfam PF00646: F-box domain 4 4 17 11 At4g11760 expressed protein 4 4 17 12 At4g11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase identical to Hydroxymethylglutaryl-CoA synthase (EC 4.1.3.5) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl coenzyme A synthase) (Swiss-Prot:P54873) [Arabidopsis thaliana] 4 4 17 13 At4g11970 YT521-B-like family protein contains Pfam profile PF04146: YT521-B-like family 4 4 17 14 At4g12020 "protein kinase family protein similar to mitogen-activated protein kinase [Arabidopsis thaliana] GI:1255448; contains Pfam profiles PF02671: Paired amphipathic helix repeat, PF03106: WRKY DNA-binding domain, PF00560: Leucine Rich Repeat, PF00069: Protein kinase domain, PF00931: NB-ARC domain" 4 4 17 15 At4g12210 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 4 4 17 16 At4g12275 reverse transcriptase-related low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278 4 4 17 17 At4g14770 "tesmin/TSO1-like CXC domain-containing protein similar to CXC domain containing TSO1-like protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC domain protein TSO1 [Arabidopsis thaliana] GI:7767425; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain" 4 4 17 18 At4g14815 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 4 4 17 19 At4g14960 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} 4 4 17 20 At4g15000 60S ribosomal protein L27 (RPL27C) 4 4 17 21 At4g15130 "cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative strong similarity to CTP:phosphorylcholine cytidylyltransferase [Arabidopsis thaliana] GI:21668498; contains Pfam profile PF01467: Cytidylyltransferase; identical to cDNA AtCCT2 for CTP:phosphorylcholine cytidylyltransferase GI:21668499" 4 4 17 22 At4g15210 "beta-amylase (BMY1) / 1,4-alpha-D-glucan maltohydrolase identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) SP:P25853 [Arabidopsis thaliana]" 4 4 17 23 At4g15350 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 4 4 17 24 At4g15396 cytochrome P450-related similar to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 {Arabidopsis thaliana} 4 4 17 25 At4g17870 expressed protein 4 4 18 1 At4g17920 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 4 4 18 2 At4g18070 expressed protein 4 4 18 3 At4g18120 "RNA recognition motif (RRM)-containing protein Mei2-like protein, Arabidopsis thaliana, gb:D86122" 4 4 18 4 At4g18300 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein similar to SP|Q64350 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Rattus norvegicus}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 4 4 18 5 At4g18335 hypothetical protein 4 4 18 6 At4g18470 negative regulator of systemic acquired resistance (SNI1) identical to negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana] gi|5758933|gb|AAD50900 4 4 18 7 At4g18510 Clavata3 / ESR-Related-2 (CLE2) CLAVATA3/ESR-Related-2 (CLE2) 4 4 18 8 At4g21300 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 4 4 18 9 At4g21340 ethylene-responsive protein-related contains similarity to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413 4 4 18 10 At4g21500 expressed protein ; expression supported by MPSS 4 4 18 11 At4g21560 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 4 4 18 12 At4g21705 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 4 4 18 13 At4g21770 pseudouridine synthase family protein contains Pfam profile PF00849: RNA pseudouridylate synthase 4 4 18 14 At4g21910 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 4 4 18 15 At4g21970 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584; expression supported by MPSS" 4 4 18 16 At4g24510 eceriferum protein (CER2) identical to (CER2) [Arabidopsis thaliana] GI:1213594; contains Pfam profile PF02458: Transferase family 4 4 18 17 At4g24550 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 4 4 18 18 At4g24720 hypothetical protein 4 4 18 19 At4g24750 expressed protein 4 4 18 20 At4g24940 SUMO activating enzyme 1a (SAE1a) identical to SUMO activating enzyme 1a [Arabidopsis thaliana] GI:22652850; contains Pfam profile PF00899: ThiF family 4 4 18 21 At4g24980 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575 4 4 18 22 At4g25150 "acid phosphatase, putative similar to acid phosphatase-1(1); Apase-1(1) [Lycopersicon esculentum] GI:7705154, acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase" 4 4 18 23 At4g25210 "expressed protein weak similarity to storekeeper protein [Solanum tuberosum] GI:14268476; contains Pfam profile PF04504: Protein of unknown function, DUF573" 4 4 18 24 At4g27760 "oxidoreductase, forever young (FEY3) identical to forever young (FEY3) oxidoreductase from GI:12004621 [Arabidopsis thaliana]" 4 4 18 25 At4g27800 protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1) identical to SP|P49599|P2C3_ARATH Protein phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis thaliana}; similar to protein phosphatase-2C; PP2C (GI:3643090) [Mesembryanthemum crystallinum] 4 4 19 1 At4g27960 "ubiquitin-conjugating enzyme E2-17 kDa 9 (UBC9) E2; identical to gi:297883, SP:P35132; identical to cDNA UBC9 for ubiquitin conjugating enzyme homolog GI:297883" 4 4 19 2 At4g28010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 19 3 At4g28150 expressed protein 4 4 19 4 At4g28210 expressed protein 4 4 19 5 At4g28365 plastocyanin-like domain-containing protein 4 4 19 6 At4g28405 Expressed protein 4 4 19 7 At4g31010 expressed protein 4 4 19 8 At4g31050 lipoyltransferase (LIP2p) identical to lipoyltransferase (LIP2p) [Arabidopsis thaliana] GI:15887052; supporting cDNA gi|15887051|dbj|AB072390.1| 4 4 19 9 At4g31180 "aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Homo sapiens] GI:20178330" 4 4 19 10 At4g31260 hypothetical protein 4 4 19 11 At4g31430 expressed protein 4 4 19 12 At4g31480 "coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative similar to Coatomer beta subunit (Beta-coat protein) (Beta-COP) from {Rattus norvegicus} SP|P23514, {Mus musculus} SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam profile: PF01602 Adaptin N terminal region" 4 4 19 13 At4g31620 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 4 4 19 14 At4g31680 transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 [Brassica oleracea var. botrytis] GI:3170424; contains Pfam profile PF02362: B3 DNA binding domain 4 4 19 15 At4g34180 cyclase family protein contains Pfam profile: PF04199 putative cyclase 4 4 19 16 At4g34220 "leucine-rich repeat transmembrane protein kinase, putative protein kinase TMKL1, Arabidopsis thaliana, PID:E353150" 4 4 19 17 At4g34350 LytB family protein contains Pfam profile: PF02401 LytB protein 4 4 19 18 At4g34410 "AP2 domain-containing transcription factor, putative ethylene-responsive element binding protein homolog, Stylosanthes hamata, U91857" 4 4 19 19 At4g34560 expressed protein 4 4 19 20 At4g34620 "ribosomal protein S16 family protein ribosomal protein S16, Neurospora crassa, PIR2:A29927" 4 4 19 21 At4g34800 auxin-responsive family protein similar to small auxin-up regulated protein SAUR (GI:3043536) [Raphanus sativus]; small auxin up RNA (SAUR-AC1) (SP:S70188) [Arabidopsis thaliana] 4 4 19 22 At4g34860 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 4 4 19 23 AT5G57480 PC-1 D09 4 4 19 24 3XSSC PC-1 D21 4 4 19 25 AT1G29930 PC-1 H09 4 4 20 1 3XSSC PC-1 H21 4 4 20 2 AT3G44150 PC-1 L09 4 4 20 3 3XSSC PC-1 L21 4 4 20 4 AT4G00810 PC-1 P09 4 4 20 5 3XSSC PC-1 P21 4 4 20 6 At4g37480 DNAJ heat shock N-terminal domain-containing protein low similarity to J-Domain (Residues 2-76) In The Escherichia coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj GI:1942570; contains Pfam profile PF00226 DnaJ domain 4 4 20 7 At4g37540 LOB domain protein 39 / lateral organ boundaries domain protein 39 (LBD39) identical to SP|Q9SZE8 LOB domain protein 39 {Arabidopsis thaliana} 4 4 20 8 At4g37700 expressed protein 4 4 20 9 At4g37760 "squalene monooxygenase, putative / squalene epoxidase, putative similar to SP|O65404 (SE 1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)" 4 4 20 10 At4g37940 "MADS-box family protein MADS-box protein AGL17 - Arabidopsis thaliana, PID:g862648; identical to cDNA MADS-box protein AGL21 GI:18478602" 4 4 20 11 At4g38010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 20 12 At4g38150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 20 13 At4g38190 "cellulose synthase family protein similar to cellulose synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-5 (gi:9622882) from Zea mays" 4 4 20 14 At5g01610 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 4 4 20 15 At5g01660 kelch repeat-containing protein similar to SP|P57790 Kelch-like ECH-associated protein 1 (Cytosolic inhibitor of Nrf2) {Rattus norvegicus}; contains Pfam profile PF01344: Kelch motif 4 4 20 16 At5g01800 "saposin B domain-containing protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 4 4 20 17 At5g01860 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 4 4 20 18 At5g02020 expressed protein 4 4 20 19 At5g02060 "integral membrane protein, putative contains 4 transmembrane domains; similar to hypothetical proteins - Arabidopsis thaliana; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 4 4 20 20 At5g02230 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 4 4 20 21 At5g02290 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] SWISS-PROT:Q06548" 4 4 20 22 At5g05010 clathrin adaptor complexes medium subunit-related contains pfam profile: PF00928 adaptor complexes medium subunit family 4 4 20 23 At5g05070 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 4 4 20 24 At5g05250 expressed protein 4 4 20 25 At5g05310 expressed protein 4 4 21 1 At5g05440 expressed protein low similarity to cytokinin-specific binding protein [Vigna radiata] GI:4190976 4 4 21 2 At5g05490 "cohesion family protein SYN1, splice variant 1 (SYN1) identical to SYN1 splice variant 1 [Arabidopsis thaliana] GI:6453715" 4 4 21 3 At5g05630 amino acid permease family protein weak similarity to y+LAT1a (amino acid transporter) [Mus musculus] GI:3970791; contains Pfam profile PF00324: Amino acid permease 4 4 21 4 At5g05660 zinc finger (NF-X1 type) family protein contains PF01422: NF-X1 type zinc finger 4 4 21 5 At5g08340 riboflavin biosynthesis protein-related contains weak similarity to Riboflavin biosynthesis protein ribF. (Swiss-Prot:P08391) [Escherichia coli O157:H7] 4 4 21 6 At5g08380 "alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative similar to alpha-galactosidase SP:Q42656 from [Coffea arabica]; contains Pfam profile PF02065: Melibiase" 4 4 21 7 At5g08530 "NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) from {Homo sapiens} SP|P49821, {Bos taurus} SP|P25708, {Aspergillus niger} SP|Q92406; contains Pfam profile PF01512: Respiratory-chain NADH dehydrogenase 51 Kd subunit" 4 4 21 8 At5g08560 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to will die slowly protein (WDS) (SP:Q9V3J8) [Drosophila melanogaster] 4 4 21 9 At5g08740 pyridine nucleotide-disulphide oxidoreductase family protein similar to DhnA [Synechococcus sp. PCC 7942] GI:15620546; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase 4 4 21 10 At5g09220 amino acid permease 2 (AAP2) identical to amine acid permease AAP2 [Arabidopsis thaliana] GI:510236 4 4 21 11 At5g09320 "vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein contains similarity to Rab5 GDP/GTP exchange factor, Rabex5 [Bos taurus] gi|2558516|emb|CAA04545; contains Pfam profile PF02204: Vacuolar sorting protein 9 (VPS9) domain" 4 4 21 12 At5g09370 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein - Hordeum vulgare, EMBL:AF109195; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 4 4 21 13 At5g12130 integral membrane TerC family protein contains Pfam profile PF03741: Integral membrane protein TerC family 4 4 21 14 At5g12190 RNA recognition motif (RRM)-containing protein similar to SP|P52298 20 kDa nuclear cap binding protein (NCBP 20 kDa subunit) (CBP20) (NCBP interacting protein 1) (NIP1) {Homo sapiens}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 4 4 21 15 At5g12330 lateral root primordium 1 (LRP1) identical to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 4 4 21 16 At5g12390 expressed protein 4 4 21 17 At5g12910 "histone H3, putative similar to histone H3 from Mus musculus GI:51301, Gallus gallus GI:211859, Medicago sativa GI:166384, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 4 4 21 18 At5g12970 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 4 4 21 19 At5g13160 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 4 21 20 At5g13220 expressed protein 4 4 21 21 At5g15940 short-chain dehydrogenase/reductase (SDR) family protein similar to forever young oxidoreductase GI:18138083 from [Lycopersicon esculentum] 4 4 21 22 At5g16000 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 4 4 21 23 At5g16180 "hypothetical protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 4 4 21 24 At5g16240 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Sesamum indicum GI:575942, Cucumis sativus SP|P32061, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 4 4 21 25 At5g16380 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 4 4 22 1 At5g16420 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 22 2 At5g16590 "leucine-rich repeat transmembrane protein kinase, putative " 4 4 22 3 At5g16640 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 4 4 22 4 At5g19210 "DEAD/DEAH box helicase, putative EUKARYOTIC INITIATION FACTOR 4A-II (EIF-4A-II), Homo sapiens, SWISSPROT:IF42_HUMAN" 4 4 22 5 At5g19260 expressed protein various predicted proteins 4 4 22 6 At5g19410 "ABC transporter family protein white membrane transporter, Bactrocera tryoni, EMBL:U97104" 4 4 22 7 At5g19460 MutT/nudix family protein similar to SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain 4 4 22 8 At5g19640 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 4 22 9 At5g19700 MATE efflux protein-related contains Pfam profile PF01554: Uncharacterized membrane protein family 4 4 22 10 At5g19870 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 4 4 22 11 At5g19920 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); related to TipD protein (SP:O15736, PIR:T08602) [Dictyostelium discoideum]; related to WD-repeat protein RBAP1 (GI:9716495) [Zea mays]" 4 4 22 12 At5g23240 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|O34136 Chaperone protein dnaJ (40 kDa heat shock chaperone protein) (HSP40) {Deinococcus proteolyticus}; contains Pfam profile PF00226: DnaJ domain 4 4 22 13 At5g23280 "TCP family transcription factor, putative similar to PCF2 [(GI:2580440) Oryza sativa]" 4 4 22 14 At5g23420 high mobility group (HMG1/2) family protein similar to high mobility group protein 2 HMG2 [Ipomoea nil] GI:1052956; contains Pfam profile PF00505: HMG (high mobility group) box 4 4 22 15 At5g23460 expressed protein 4 4 22 16 At5g23650 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 4 4 22 17 At5g23710 expressed protein 4 4 22 18 At5g23850 expressed protein 4 4 22 19 At5g23900 60S ribosomal protein L13 (RPL13D) 4 4 22 20 At5g26610 D111/G-patch domain-containing protein contains Pfam PF01585: G-patch domain 4 4 22 21 At5g26760 expressed protein 4 4 22 22 At5g26910 expressed protein 4 4 22 23 At5g26970 hypothetical protein 4 4 22 24 At5g27160 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 4 4 22 25 At5g27230 expressed protein ; expression supported by MPSS 4 4 23 1 At5g27420 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] gi|4928403|gb|AAD33584.1|AF132016_1[4928403]; contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 4 4 23 2 At5g27490 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 4 4 23 3 At5g35530 40S ribosomal protein S3 (RPS3C) 4 4 23 4 At5g35590 20S proteasome alpha subunit A1 (PAA1) (PRC1) identical to proteasome subunit alpha type 6-1 SP:O81146 GI:12643647 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc1 GI:2511587 4 4 23 5 At5g35700 "fimbrin-like protein, putative similar to fimbrin-like protein (ATFIM1) [Arabidopsis thaliana] GI:2905893, fimbrin [Schizosaccharomyces pombe] GI:3057144; contains Pfam profile PF00307: Calponin homology (CH) domain" 4 4 23 6 At5g35740 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum]; C-terminal homology only 4 4 23 7 At5g35917 "cytochrome P450, putative similar to Cytochrome P450 79A2 (SP:Q9FLC8) {Arabidopsis thaliana}" 4 4 23 8 At5g35960 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 4 4 23 9 At5g36130 cytochrome P450 family simialr to taxane 13-alpha-hydroxylase [Taxus cuspidata] GI:17148242; contains Pfam profile PF00067: Cytochrome P450 4 4 23 10 At5g36170 "peptide chain release factor, putative similar to SP|P28367 Peptide chain release factor 2 (RF-2) {Bacillus subtilis}; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 4 4 23 11 At5g39400 "pollen specific phosphatase, putative / phosphatase and tensin, putative (PTEN1) identical to phosphatase and tensin homolog [Arabidopsis thaliana] GI:21535746" 4 4 23 12 At5g39460 F-box family protein contains Pfam:PF00646 F-box domain ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 4 4 23 13 At5g39640 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 4 4 23 14 At5g39700 myb family transcription factor (MYB89) identical to transcription factor (MYB89) GI:5823322 from [Arabidopsis thaliana] 4 4 23 15 At5g39865 glutaredoxin family protein 4 4 23 16 At5g39920 hypothetical protein 4 4 23 17 At5g40100 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 4 4 23 18 At5g40160 "ankyrin repeat family protein (EMB506) identical to ankyrin repeat protein EMB506 [Arabidopsis thaliana] GI:5911312; contains ankyrin repeats, Pfam:PF00023" 4 4 23 19 At5g42900 expressed protein similar to unknown protein (pir||T05226) 4 4 23 20 At5g42920 expressed protein 4 4 23 21 At5g43070 "MFP1 attachment factor, putative contains similarity to MFP1 attachment factor 1 similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659" 4 4 23 22 At5g43130 transcription initiation factor IID (TFIID) component TAF4 family protein weak similarity to SP|O00268 Transcription initiation factor TFIID 135 kDa subunit {Homo sapiens}; contains Pfam profile PF05236: Transcription initiation factor TFIID component TAF4 family 4 4 23 23 At5g43290 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 4 4 23 24 At5g43350 inorganic phosphate transporter (PHT1) (PT1) identical to inorganic phosphate transporter [Arabidopsis thaliana] GI:2258116 4 4 23 25 At5g43490 hypothetical protein similar to unknown protein (gb|AAF20218.1) 4 4 24 1 At5g43550 hypothetical protein 4 4 24 2 At5g46120 hypothetical protein 4 4 24 3 At5g46160 ribosomal protein L14 family protein / huellenlos paralog (HLP) contains Pfam profile PF00238: Ribosomal protein L14p/L23e; identical to cDNA HUELLENLOS PARALOG (HLP) nuclear gene for mitochondrial product GU:18140859 4 4 24 4 At5g46295 expressed protein 4 4 24 5 At5g46350 WRKY family transcription factor contains similarity to WRKY-type DNA-binding protein 4 4 24 6 At5g46500 expressed protein 4 4 24 7 At5g46560 expressed protein 4 4 24 8 At5g46720 expressed protein contains Pfam domain PF03674: Uncharacterised protein family (UPF0131) 4 4 24 9 At5g46780 VQ motif-containing protein contains PF05678: VQ motif 4 4 24 10 At5g49410 expressed protein similar to unknown protein (gb|AAF36742.1) 4 4 24 11 At5g49470 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 4 4 24 12 At5g49610 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to unknown protein (gb|AAF30317.1) 4 4 24 13 At5g49650 "xylulose kinase, putative similar to D-xylulokinase [Pichia stipitis] gi|8100400|gb|AAF72328" 4 4 24 14 At5g49800 expressed protein 4 4 24 15 At5g49860 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 4 4 24 16 At5g50020 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 4 4 24 17 At5g50080 "AP2 domain-containing transcription factor, putative contains similarity to AP2 domain transcription factor" 4 4 24 18 At5g52830 WRKY family transcription factor 4 4 24 19 At5g52890 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 4 4 24 20 At5g53040 RWP-RK domain-containing protein contains Pfam profile: PF02042 RWP-RK domain 4 4 24 21 At5g53080 "kinesin light chain-related low similarity to kinesin light chain from [Plectonema boryanum] GI:2645229, [Loligo pealei] GI:403179; contains Pfam profile PF00515: TPR Domain" 4 4 24 22 At5g53250 "arabinogalactan-protein, putative (AGP22) similar to arabinogalactan protein [Arabidopsis thaliana] gi|10880509|gb|AAG24284" 4 4 24 23 At5g53310 myosin heavy chain-related contains weak similarity to Myosin IB heavy chain (Swiss-Prot:P34092) [Dictyostelium discoideum] 4 4 24 24 At5g53480 "importin beta-2, putative similar to importin-beta2 [Oryza sativa (japonica cultivar-group)] GI:3983665; contains Pfam profile PF03810: Importin-beta N-terminal domain" 4 4 24 25 At5g53530 "vacuolar protein sorting-associated protein 26, putative / VPS26, putative similar to vacuolar sorting protein 26 [Homo sapiens] GI:9622852; contains Pfam profile PF03643: Vacuolar protein sorting-associated protein 26" 4 4 25 1 At5g56190 WD-40 repeat family protein contains 3 (2 significant) WD-40 repeats (PF0400); similar to beta transducin-like protein HET-E2C*40 (GI:17225208) [Podospora anserina] 4 4 25 2 At5g56250 expressed protein 4 4 25 3 At5g56410 F-box family protein contains F-box domain Pfam:PF00646 4 4 25 4 At5g56470 FAD-dependent oxidoreductase family protein contains TIGRfam TIGR01677: plant-specific FAD-dependent oxidoreductase 4 4 25 5 At5g56650 IAA-amino acid hydrolase 3 (IAR3) (ILL1) identical to IAA-amino acid hydrolase 3 [Arabidopsis thaliana] SWISS-PROT:P54969 4 4 25 6 At5g56710 60S ribosomal protein L31 (RPL31C) 4 4 25 7 At5g56890 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 4 4 25 8 At5g56940 ribosomal protein S16 family protein contains Pfam profile PF00886: ribosomal protein S16 4 4 25 9 At5g59450 "scarecrow-like transcription factor 11 (SCL11) scarecrow-like 11, Arabidopsis thaliana, EMBL:AF036307" 4 4 25 10 At5g59490 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 4 4 25 11 At5g59680 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 4 4 25 12 At5g59740 UDP-galactose/UDP-glucose transporter-related weak similarity to UDP-galactose/UDP-glucose transporter [Arabidopsis thaliana] GI:22651763 4 4 25 13 At5g59880 actin-depolymerizing factor 3 (ADF3) identical to SP|Q9ZSK4 Actin-depolymerizing factor 3 (ADF 3) (AtADF3) {Arabidopsis thaliana} 4 4 25 14 At5g59910 histone H2B nearly identical to histone H2B Arabidopsis thaliana GI:2407802; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4 4 4 25 15 At5g60070 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 4 4 25 16 At5g60130 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 4 4 25 17 At5g62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) nearly identical to 1-deoxy-d-xylulose-5-phosphate reductoisomerase [Arabidopsis thaliana] GI:4886307; contains Pfam profile PF02670: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 4 25 18 At5g62850 nodulin MtN3 family protein contains Pfam PF03083 MtN3/saliva family; similar to LIM7 (cDNAs induced in meiotic prophase in lily microsporocytes) GI:431154 from [Lilium longiflorum] 4 4 25 19 At5g63020 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 4 4 25 20 At5g63060 "SEC14 cytosolic factor, putative " 4 4 25 21 At5g63190 MA3 domain-containing protein low similarity to programmed cell death 4 protein [Gallus gallus] GI:12958564; contains Pfam profile PF02847: MA3 domain 4 4 25 22 At5g63260 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 4 4 25 23 At5g63440 "expressed protein contains Pfam PF02594: Uncharacterized ACR, YggU family COG1872" 4 4 25 24 At5g63480 expressed protein 4 4 25 25 At5g66020 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13" 4 4 26 1 At5g66040 senescence-associated family protein almost identical to ketoconazole resistant protein GI:928938 from [Arabidopsis thaliana] full-length cDNA: Ceres:101608. 4 4 26 2 At5g66150 glycosyl hydrolase family 38 protein similar to lysosomal alpha-mannosidase SP:O09159 from [Mus musculus] 4 4 26 3 At5g66200 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 4 4 26 4 At5g66320 zinc finger (GATA type) family protein 4 4 26 5 At5g66360 "ribosomal RNA adenine dimethylase family protein similar to SP|P41819 Dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF00398: ribosomal RNA adenine dimethylase family protein" 4 4 26 6 At5g66530 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044; contains Pfam profile PF01263: Aldose 1-epimerase 4 4 26 7 At5g66590 allergen V5/Tpx-1-related family protein contains similarity to SP|Q41495 STS14 protein precursor {Solanum tuberosum}; contains Pfam profile PF00188: SCP-like extracellular protein 4 4 26 8 3xSSC 3xSSC 4 4 26 9 3xSSC 3xSSC 4 4 26 10 3xSSC 3xSSC 4 4 26 11 3xSSC 3xSSC 4 4 26 12 3xSSC 3xSSC 4 4 26 13 3xSSC 3xSSC 4 4 26 14 3xSSC 3xSSC 4 4 26 15 3xSSC 3xSSC 4 4 26 16 At3g45720 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 4 4 26 17 At3g45770 "oxidoreductase, zinc-binding dehydrogenase family protein similar to nuclear receptor binding factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724; contains Pfam zinc-binding dehydrogenase domain PF00107" 4 4 26 18 At3g45940 "alpha-xylosidase, putative strong similarity to alpha-xylosidase precursor GI:4163997 from [Arabidopsis thaliana]" 4 4 26 19 At3g46000 "actin-depolymerizing factor, putative (ADF2) strong similarity to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 4 4 26 20 At3g46180 UDP-galactose/UDP-glucose transporter-related contains weak similarity to UDP-galactose/UDP-glucose transporter (GI:22651763) [Arabidopsis thaliana] 4 4 26 21 At3g46240 protein kinase-related similar to light repressible receptor protein kinase (GI:1321686) [Arabidopsis thaliana] 4 4 26 22 At3g46430 expressed protein 4 4 26 23 At3g46490 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to hyoscyamine 6 beta-hydroxylase from Atropa belladonna [GI:4996123] and Hyoscyamus niger [SP|P24397], gibberellin 20-oxidase [GI:9791186]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 4 4 26 24 Blank Blank 4 4 26 25 Blank Blank 5 1 1 1 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 5 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 5 1 1 3 Alien3 Control: Stratagene Spotreport Alien Oligo 5 1 1 4 Alien9 Control: Stratagene Spotreport Alien Oligo 5 1 1 5 atc05 Randomly generated negative control 5 1 1 6 atc11 Randomly generated negative control 5 1 1 7 At5g46430 60S ribosomal protein L32 (RPL32B) 5 1 1 8 atc01 Randomly generated negative control 5 1 1 9 At1g01930 "zinc finger protein-related contains Pfam PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc finger, C2H2 type domain and Prosite PS00028: Zinc finger, C2H2 type, domain" 5 1 1 10 At1g01990 expressed protein 5 1 1 11 At1g02090 "COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii [Arabidopsis thaliana] GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced" 5 1 1 12 At1g02130 "Ras-related protein (ARA-5) / small GTP-binding protein, putative identical to Ras-related protein ARA-5 SP:P28188 from [Arabidopsis thaliana]" 5 1 1 13 At1g02290 expressed protein 5 1 1 14 At1g02340 long hypocotyl in far-red 1 (HFR1) / reduced phytochrome signaling (REP1) / basic helix-loop-helix FBI1 protein (FBI1) / reduced sensitivity to far-red light (RSF1) / bHLH protein 26 (BHLH026) (BHLH26) identical to SP|Q9FE22 Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Reduced sensitivity to far-red light) [Arabidopsis thaliana] 5 1 1 15 At1g02510 "outward rectifying potassium channel, putative (KCO4) similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 5 1 1 16 At1g02570 expressed protein 5 1 1 17 At1g05180 auxin-resistance protein AXR1 (AXR1) identical to SP|P42744 Auxin-resistance protein AXR1 {Arabidopsis thaliana}; contains Pfam profile PF00899: ThiF family; identical to cDNA ubiquitin activating enzyme E1-related protein (AXR1) GI:304103 5 1 1 18 At1g05230 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox 1 (GP:12002853) {Picea abies}; Strong similarity to Phalaenopsis homeobox protein (gb|U34743) 5 1 1 19 At1g05400 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 5 1 1 20 At1g05450 protease inhibitor/seed storage/lipid transfer protein (LTP)-related similar to geranyl diphosphate synthase large subunit [Mentha x piperita] GI:6449052 5 1 1 21 At1g05600 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 5 1 1 22 At1g05650 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 5 [Lycopersicon esculentum] GI:2459817; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 5 1 1 23 At1g05785 Got1-like family protein contains Pfam PF04178: Got1-like family profile; contains 4 transmembrane domains; 5 1 1 24 At1g05830 "trithorax protein, putative / PHD finger family protein / SET domain-containing protein similar to trithorax-like protein 1 [Arabidopsis thaliana] GI:12659210; contains Pfam domain, PF00628: PHD-finger and PF00856: SET domain" 5 1 1 25 At1g08315 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 5 1 2 1 At1g08380 expressed protein 5 1 2 2 At1g08550 "violaxanthin de-epoxidase precursor, putative (AVDE1) similar to EST gb|N37612" 5 1 2 3 At1g08610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 5 1 2 5 At1g08790 hypothetical protein 5 1 2 6 At1g08940 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 5 1 2 7 At1g09000 "NPK1-related protein kinase, putative (ANP1) similar to protein kinase [Nicotiana tabacum] gi|456309|dbj|BAA05648; identical to cDNA NPK1-related protein kinase 1S GI:2342422" 5 1 2 8 At1g11600 "cytochrome P450, putative similar to cytochrome P450 77A2 (CYPLVIIA2) (P-450EG5) [Solanum melongena] and cytochrome P450 77A3 (SP:O48928) [Glycine max]; is a member of the PF|00067 Cytochrome P450 family. ESTs gb|Z30775 and gb|Z30776 come from this gene" 5 1 2 9 At1g11650 "RNA-binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains. ESTs gb|T44278, gb|R65195, gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1" 5 1 2 10 At1g11810 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; EST gb|AA605362 comes from this gene 5 1 2 11 At1g11860 "aminomethyltransferase, putative similar to aminomethyltransferase, mitochondrial precursor SP:O49849 from [Flaveria anomala]" 5 1 2 12 At1g11970 hypothetical protein 5 1 2 13 At1g12030 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 5 1 2 14 At1g12190 F-box family protein contains F-box domain Pfam:PF00646 5 1 2 15 At1g12250 "thylakoid lumenal protein-related weak similarity to SP|O22160 Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) {Arabidopsis thaliana}; contains Pfam profile PF00805: Pentapeptide repeats (8 copies)" 5 1 2 16 At1g15020 "thioredoxin family protein low similarity to FAD-dependent sulfhydryl oxidase-2 [Rattus norvegicus] GI:12483919; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 5 1 2 17 At1g15050 auxin-responsive AUX/IAA family protein similar to auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12)[Arabidopsis thaliana]; contains Pfam profile: PF02309: AUX/IAA family 5 1 2 18 At1g15210 ABC transporter family protein Similar to gb|Z70524 GI:1514643 PDR5-like ABC transporter from Spirodela polyrrhiza and is a member of the PF|00005 ABC transporter family. ESTs gb|N97039 and gb|T43169 come from this gene 5 1 2 19 At1g15220 cytochrome c biogenesis protein family contains Pfam PF03918: Cytochrome C biogenesis protein; similar to Cytochrome c-type biogenesis protein cycL precursor.(SP:P45405) {Bradyrhizobium japonicum} 5 1 2 20 At1g15385 expressed protein 5 1 2 21 At1g15415 "expressed protein very low similarity to LEA protein [Cicer arietinum] GI:2909420, seed maturation protein PM30 [Glycine max] GI:4838147" 5 1 2 22 At1g15590 hypothetical protein 5 1 2 23 At1g15660 expressed protein similar to CENPCA protein (GI:11863170) {Zea mays} 5 1 2 24 At1g18440 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 5 1 2 25 At1g18485 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 5 1 3 1 At1g18660 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 5 1 3 2 At1g18710 myb family transcription factor (MYB47) contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 3 3 At1g18900 "pentatricopeptide (PPR) repeat-containing protein low similarity to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842; contains Pfam profile PF01535: PPR repeat" 5 1 3 4 At1g18970 germin-like protein (GLP1) (GLP4) identical to germin-like protein subfamily T member 1 [SP|P92995] 5 1 3 5 At1g19100 "ATP-binding region, ATPase-like domain-containing protein-related low similarity to microrchidia [Homo sapiens] GI:5410257; contains non-consensus splice site (GC) at intron 8" 5 1 3 6 At1g19140 expressed protein 5 1 3 7 At1g22050 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 5 1 3 8 At1g22110 expressed protein 5 1 3 9 At1g22270 expressed protein contains Pfam domain PF03966: Protein of unknown function (DUF343) 5 1 3 10 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 5 1 3 11 At1g22440 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon esculentum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 5 1 3 12 At1g22500 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 5 1 3 13 At1g22670 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326" 5 1 3 14 At1g22730 MA3 domain-containing protein contains Pfam profile PF02847: MA3 domain; low similarity to programmed cell death 4 protein [Gallus gallus] GI:12958564 5 1 3 15 At1g26260 basic helix-loop-helix (bHLH) family protein similar to bHLH transcription factor GBOF-1 GI:5923912 from [Tulipa gesneriana] 5 1 3 16 At1g26320 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar to allyl alcohol dehydrogenase GI:9758497 from [Arabidopsis thaliana]" 5 1 3 17 At1g26510 F-box family protein contains F-box domain Pfam:PF00646 5 1 3 18 At1g26570 "UDP-glucose 6-dehydrogenase, putative strong similarity to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain" 5 1 3 19 At1g26720 expressed protein ; expression supported by MPSS 5 1 3 20 At1g26780 myb family transcription factor (MYB117) contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 3 21 At1g26920 "expressed protein Location of EST 228A16T7A, gb|N65686" 5 1 3 22 At1g26970 "protein kinase, putative similar to protein kinase [Arabidopsis thaliana] gi|2852449|dbj|BAA24695; contains protein kinase domain, Pfam:PF00069" 5 1 3 23 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase identical to SP|O23627 Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis thaliana} 5 1 3 24 At1g29940 "DNA-directed RNA polymerase family protein similar to SP|P22138 DNA-directed RNA polymerase I 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit 2) {Saccharomyces cerevisiae}; contains Pfam profiles PF04563; RNA polymerase beta subunit, PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF00562: RNA polymerase Rpb2 domain 6" 5 1 3 25 At1g30090 "kelch repeat-containing F-box family protein similar to SP|O95198 Kelch-like protein 2 (Actin-binding protein Mayven) {Homo sapiens}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 5 1 4 1 At1g30130 expressed protein similar to hypothetical protein GI:1469227 from [Brassica oleracea] 5 1 4 2 At1g30330 "auxin-responsive factor (ARF6) identical to ARF6 [Arabidopsis thaliana] GI:4102600 (Science 276 (5320), 1865-1868 (1997))" 5 1 4 3 At1g30410 "ATP-binding cassette transport protein, putative similar to MgATP-energized glutathione S-conjugate pump [Arabidopsis thaliana] GI:2909781; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 5 1 4 4 At1g30550 expressed protein similar to PIMT (GI:15127914) [Mus musculus]; similar to hypothetical protein GB:AAF19758 GI:6634778 from [Arabidopsis thaliana] 5 1 4 5 At1g30610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 4 6 At1g33590 "disease resistance protein-related / LRR protein-related contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 5 1 4 7 At1g33680 KH domain-containing protein similar to FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo sapiens] 5 1 4 8 At1g33870 "avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family" 5 1 4 9 At1g33930 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family 5 1 4 10 At1g34095 expressed protein ; expression supported by MPSS 5 1 4 11 At1g34150 tRNA pseudouridine synthase family protein similar to pseudouridine synthase 3 [Mus musculus] GI:9652099; contains Pfam profile PF01416: tRNA pseudouridine synthase 5 1 4 12 At1g34350 expressed protein 5 1 4 13 At1g34390 "transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02309 AUX/IAA family, PF02362: B3 DNA binding domain" 5 1 4 14 At1g44446 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chlorophyll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain 5 1 4 15 At1g44608 hypothetical protein 5 1 4 16 At1g44875 hypothetical protein 5 1 4 17 At1g44930 hypothetical protein 5 1 4 18 At1g45170 expressed protein contains similarity to vacuolating cytotoxin (vacA) GI:6634155 from [Helicobacter pylori] 5 1 4 19 At1g45243 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 1 4 20 At1g46480 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana] 5 1 4 21 At1g47056 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 5 1 4 22 At1g50050 "pathogenesis-related protein, putative similar to pathogenesis-related protein 1b precursor (pr-1b) GB:X03465 GI:19977 from [Nicotiana tabacum]; contains Pfam profile PF00188: SCP-like extracellular protein" 5 1 4 23 At1g50140 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 5 1 4 24 At1g50350 hypothetical protein 5 1 4 25 At1g50410 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to transcription factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 5 1 5 1 At1g50600 scarecrow-like transcription factor 5 (SCL5) similar to SCARECROW GB:AAB06318 GI:1497987 from [Arabidopsis thaliana] 5 1 5 2 At1g50660 "expressed protein similar to liver stage antigen-1 (GI:510184) [Plasmodium falciparum]; similar to Myosin II heavy chain, non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum]; similar to liver stage antigen (GI:9916) [Plasmodium falciparum]; similar to Kinesin-like protein KLPA (Swiss-Prot:P28739) [Emericella nidulans]" 5 1 5 3 At1g50870 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to Probable disease resistance RPP8-like protein 2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana] 5 1 5 4 At1g50930 hypothetical protein 5 1 5 5 At1g53590 C2 domain-containing protein 5 1 5 6 At1g53645 hydroxyproline-rich glycoprotein family protein 5 1 5 7 At1g53815 F-box family protein contains Pfam profile PF00646: F-box domain 5 1 5 8 At1g53870 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 5 1 5 9 At1g54020 "myrosinase-associated protein, putative strong similarity to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216389,GI:1216391 from [Brassica napus]; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 5 1 5 10 At1g54070 dormancy/auxin associated protein-related 5 1 5 11 At1g54210 autophagy 12a (APG12a) identical to autophagy 12a [Arabidopsis thaliana] GI:19912169 5 1 5 12 At1g54250 "DNA-directed RNA polymerase I, II, and III, putative similar to SP|P52434 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide (EC 2.7.7.6) (RPB17) (RPB8) {Homo sapiens}; contains Pfam profile PF03870: RNA polymerase Rpb8" 5 1 5 13 At1g57770 "amine oxidase family contains similarity to carotenoid isomerase [Lycopersicon esculentum] GI:19550437, phytoene dehydrogenase (PDH1) GI:433144 from (Cercospora nicotianae); contains Pfam profile PF01593 amine oxidase, flavin-containing" 5 1 5 14 At1g57850 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 5 1 5 15 At1g58160 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 5 1 5 16 At1g58220 myb family transcription factor contains Pfam profile: PF00249: Myb-like DNA-binding domain 5 1 5 17 At1g58340 MATE efflux protein-related contains Pfam profile: PF01554 uncharacterized membrane protein family UPF0013 5 1 5 18 At1g58400 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 5 1 5 19 At1g59030 "GDSL-motif lipase, putative similar to family II lipase EXL3 GI:15054386 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 5 1 5 20 At1g59510 expressed protein 5 1 5 21 At1g62380 "1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative nearly identical to ACC oxidase (ACC ox1) GI:587086 from [Brassica oleracea]" 5 1 5 22 At1g62440 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 5 1 5 23 At1g62630 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 5 1 5 24 At1g62700 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 5 1 5 25 At1g62840 expressed protein 5 1 6 1 At1g62890 hypothetical protein 5 1 6 2 At1g63055 expressed protein 5 1 6 3 At1g63105 hypothetical protein 5 1 6 4 At1g65810 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 5 1 6 5 At1g65870 disease resistance-responsive family protein similar to dirigent protein [Forsythia x intermedia] gi|6694693|gb|AAF25357; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 5 1 6 6 At1g66050 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 5 1 6 7 At1g66110 hypothetical protein contains Pfam profile PF04510: Family of unknown function (DUF577) 5 1 6 8 At1g66245 hypothetical protein 5 1 6 9 At1g66310 F-box family protein contains F-box domain Pfam:PF00646 5 1 6 10 At1g66480 expressed protein 5 1 6 11 At1g66530 "arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative similar to SP|P37880 Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS) {Cricetulus longicaudatus}; contains Pfam profiles PF00750: arginyl-tRNA synthetase, PF03485: arginyl-tRNA synthetase N-terminal domain" 5 1 6 12 At1g69230 expressed protein 5 1 6 13 At1g69270 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 5 1 6 14 At1g69400 transducin family protein / WD-40 repeat family protein similar to mitotic checkpoint protein (GI:9294423) {Arabidopsis thaliana}; similar to mitotic checkpoint protein (BUB3) (SP:O43684) (Homo sapiens) 5 1 6 15 At1g69460 emp24/gp25L/p24 family protein similar to SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Oryctolagus cuniculus}; contains Pfam profile: PF01105: emp24/gp25L/p24 family 5 1 6 16 At1g69570 Dof-type zinc finger domain-containing protein nearly identical to H-protein promoter binding factor-2b (Arabidopsis thaliana) GI:3386548 5 1 6 17 At1g69640 "acid phosphatase, putative similar to GI:5360721 from [Lupinus albus]" 5 1 6 18 At1g69820 gamma-glutamyltranspeptidase family protein similar to SP|P19440 Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (CD224 antigen) {Homo sapiens}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 5 1 6 19 At1g69880 "thioredoxin, putative similar to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana}; contains Pfam profile: PF00085 Thioredoxin" 5 1 6 20 At1g72680 "cinnamyl-alcohol dehydrogenase, putative similar to cinnamyl-alcohol dehydrogenase GB:AAC35846 [Medicago sativa], SP|Q08350 [Picea abies]" 5 1 6 21 At1g72740 "DNA-binding family protein / histone H1/H5 family protein similar to DNA-binding protein PcMYB1 [Petroselinum crispum] GI:2224897; contains Pfam profiles PF00538: linker histone H1 and H5 family, PF00249: Myb-like DNA-binding domain" 5 1 6 22 At1g72910 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 5 1 6 23 At1g72970 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 5 1 6 24 At1g73160 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 5 1 6 25 At1g73200 expressed protein 5 1 7 1 At1g73350 expressed protein 5 1 7 2 At1g73400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 7 3 AT5G57480 PC-1 A08 5 1 7 4 3XSSC PC-1 A20 5 1 7 5 AT1G29930 PC-1 E08 5 1 7 6 3XSSC PC-1 E20 5 1 7 7 AT3G44150 PC-1 I08 5 1 7 8 3XSSC PC-1 I20 5 1 7 9 AT4G00810 PC-1 M08 5 1 7 10 3XSSC PC-1 M20 5 1 7 11 At1g76240 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 5 1 7 12 At1g76300 "small nuclear ribonucleoprotein D3, putative / snRNP core protein D3, putative / Sm protein D3, putative similar to SWISS-PROT:P43331 small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3, Sm-D3) [Mouse]" 5 1 7 13 At1g76440 expressed protein 5 1 7 14 At1g76490 3-hydroxy-3-methylglutaryl-CoA reductase 1 / HMG-CoA reductase 1 (HMG1) identical to HMG-CoA reductase 1 [SP|P14891] 5 1 7 15 At1g76650 calcium-binding EF hand family protein similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 5 1 7 16 At1g76710 SET domain-containing protein (ASHH1) low similarity to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain; identical to cDNA ASH1-like protein 1 (ASHH1) partial cds GI:15488417 5 1 7 17 At1g76870 hypothetical protein 5 1 7 18 At1g76910 hypothetical protein 5 1 7 19 At1g79540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 7 20 At1g79590 syntaxin 52 (SYP52) identical to Swiss-Prot:Q94KK7 syntaxin 52 (AtSYP52) [Arabidopsis thaliana] 5 1 7 21 At1g79730 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 5 1 7 22 At1g79790 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 5 1 7 23 At1g79910 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 5 1 7 24 At1g79950 helicase-related similar to BRCA1-binding helicase-like protein BACH1 (GI:13661819) Homo sapiens].; contains similarity to helicase-like protein NHL GI:6969265 from (Homo sapiens) 5 1 7 25 At1g80090 "CBS domain-containing protein low similarity to SP|Q9MYP4 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Sus scrofa}; contains Pfam profile PF00571: CBS domain" 5 1 8 1 At1g80150 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 5 1 8 2 At2g02990 "ribonuclease 1 (RNS1) identical to ribonuclease SP:P42813 Ribonuclease 1 precursor (EC 3.1.27.1) {Arabidopsis thaliana}, GI:561998 from [Arabidopsis thaliana]" 5 1 8 3 At2g03040 transmembrane protein-related low similarity to SP|Q28735|TM21_RABIT Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) (Integral membrane protein p23) {Oryctolagus cuniculus} 5 1 8 4 At2g03240 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 5 1 8 5 At2g03300 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 5 1 8 6 At2g03480 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase; non-consensus GA donor site at exon 4 5 1 8 7 At2g03540 expressed protein ; expression supported by MPSS 5 1 8 8 At2g03730 ACT domain-containing protein (ACR5) contains Pfam ACT domain PF01842 5 1 8 9 At2g03800 expressed protein 5 1 8 10 At2g07702 expressed protein 5 1 8 11 At2g07714 "transcription factor-related similar to male sterility 1 proteins (GI:15554513,GI:15554515)) [Arabidopsis thaliana]" 5 1 8 12 At2g07710 hypothetical protein 5 1 8 13 At2g07981 hypothetical protein 5 1 8 14 At2g10285 expressed protein 5 1 8 15 At2g10390 hypothetical protein 5 1 8 16 At2g10940 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family 5 1 8 17 At2g11000 "natC N(alpha)-terminal acetyltransferase, Mak10 subunit family protein contains Pfam PF04112: Mak10 subunit, NatC N(alpha)-terminal acetyltransferase; similar to corneal wound healing related protein (GI:8926320) [Rattus norvegicus]; weak similarity to Glucose repressible protein MAK10 (Swiss-Prot:Q02197) [Saccharomyces cerevisiae]" 5 1 8 18 At2g16210 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 5 1 8 19 At2g16270 expressed protein and genefinder; expression supported by MPSS 5 1 8 20 At2g16460 expressed protein 5 1 8 21 At2g16500 arginine decarboxylase 1 (SPE1) (ARGDC) identical to SP|Q9SI64 Arginine decarboxylase 1 (EC 4.1.1.19) (ARGDC 1) (ADC 1) (ADC-O) {Arabidopsis thaliana} 5 1 8 22 At2g16710 hesB-like domain-containing protein similar to IscA (putative iron-sulfur cluster assembly protein) [Azotobacter vinelandii] GI:2271523; contains Pfam profile PF01521: HesB-like domain 5 1 8 23 At2g16770 expressed protein 5 1 8 24 At2g16930 ribosomal protein L27 family protein contains Pfam profile PF01016: ribosomal protein L27 5 1 8 25 At2g16980 expressed protein 5 1 9 1 At2g19780 "leucine-rich repeat family protein / extensin family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to leucine-rich repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 5 1 9 2 At2g19850 hypothetical protein 5 1 9 3 At2g20010 expressed protein 5 1 9 4 At2g20070 hypothetical protein weak similarity to SP|O61705 Neurotoxin BmK-X precursor (BmK10) (Alpha-neurotoxin TX9) {Mesobuthus martensii} 5 1 9 5 At2g20240 expressed protein 5 1 9 6 At2g20300 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 9 7 At2g20480 expressed protein 5 1 9 8 At2g20520 fasciclin-like arabinogalactan-protein (FLA6) identical to gi|13377780_gb_AAK20859 5 1 9 9 At2g23140 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 5 1 9 10 At2g23200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 9 11 At2g23370 expressed protein 5 1 9 12 At2g23430 "kip-related protein 1 (KRP1) / cyclin-dependent kinase inhibitor 1 (ICK1) identical to cyclin-dependent kinase inhibitor (ICK1) [Arabidopsis thaliana] GI:3550262, GI:2052502" 5 1 9 13 At2g23600 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 1 9 14 At2g23670 expressed protein 5 1 9 15 At2g23830 "vesicle-associated membrane protein, putative / VAMP, putative similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia]" 5 1 9 16 At2g23930 "small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative similar to small nuclear ribonucleoprotein G (snRNP-G, Sm protein G, Sm-G, SmG) [Homo sapiens] SWISS-PROT:Q15357" 5 1 9 17 At2g26770 "plectin-related contains weak similarity to Swiss-Prot:Q9JI55 plectin 1 (PLTN, PCN, 300-kDa intermediate filament-associated protein, IFAP300)[Cricetulus griseus]" 5 1 9 18 At2g26810 expressed protein and genefinder 5 1 9 19 At2g26970 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 5 1 9 20 At2g27010 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; 5 1 9 21 At2g27140 heat shock family protein contains similarity to Swiss-Prot:P27397 18.0 kDa class I heat shock protein [Daucus carota] 5 1 9 22 At2g27200 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 5 1 9 23 At2g27340 hypothetical protein 5 1 9 24 At2g27385 expressed protein 5 1 9 25 At2g30115 expressed protein weak similarity to 65kD microtubule associated protein [Daucus carota] GI:28200790 5 1 10 1 At2g30170 expressed protein 5 1 10 2 At2g30350 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 5 1 10 3 At2g30390 "ferrochelatase II identical to Swiss-Prot:O04921 ferrochelatase II, chloroplast precursor (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase) [Arabidopsis thaliana]" 5 1 10 4 At2g30550 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 5 1 10 5 At2g30590 WRKY family transcription factor 5 1 10 6 At2g30720 "thioesterase family protein similar to SP|Q9R0X4 48 kDa acyl-CoA thioester hydrolase, mitochondrial precursor (EC 3.1.2.-) {Mus musculus}; contains Pfam profile PF03061: thioesterase family protein" 5 1 10 7 At2g30780 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 10 8 At2g33390 expressed protein 5 1 10 9 At2g33440 "splicing factor family protein similar to Splicing factor U2AF 65 kDa subunit (U2 snRNP auxiliary factor large subunit) {Homo sapiens} SP|P26368, {Mus musculus} SP|P26369; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 1 10 10 At2g33585 expressed protein 5 1 10 11 At2g33640 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 5 1 10 12 At2g33770 "ubiquitin-conjugating enzyme family protein low similarity to ubiquitin-conjugating BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating enzyme [Mus musculus] GI:3319990; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 5 1 10 13 At2g33800 "ribosomal protein S5 family protein contains Pfam profiles PF03719: Ribosomal protein S5, C-terminal domain, PF00333: Ribosomal protein S5, N-terminal domain" 5 1 10 14 At2g34020 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 5 1 10 15 At2g34060 "peroxidase, putative similar to peroxidase ATP20a {Arabidopsis thaliana} GP|9757794|dbj|BAB08292" 5 1 10 16 At2g36670 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 5 1 10 17 At2g36700 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 5 1 10 18 At2g36880 "S-adenosylmethionine synthetase, putative similar to S-adenosylmethionine synthetase 3 (Methionine adenosyltransferase 3, AdoMet synthetase 3) [Lycopersicon esculentum] SWISS-PROT:P43282" 5 1 10 19 At2g36900 Golgi SNARE protein membrin 11 (MEMB11) / Golgi SNAP receptor complex member 2-1 identical to SP:Q9SJL6; identical to Probable 27 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 2) (SP:Q9SJL6) [Arabidopsis thaliana] 5 1 10 20 At2g37050 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 5 1 10 21 At2g37090 "glycosyl transferase family 43 protein low similarity to galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2, Rattus norvegicus [SP|Q9Z137]; contains Pfam domain Glycosyltransferase family 43 [PF03360]" 5 1 10 22 At2g37240 expressed protein weak similarity to fmHP (GI:22902096) [Takifugu rubripes] 5 1 10 23 At2g37300 expressed protein and genefinder 5 1 10 24 At2g39900 "LIM domain-containing protein similar to pollen specific LIM domain protein 1b [Nicotiana tabacum] GI:6467905, PGPS/D1 [Petunia x hybrida] GI:4105772; contains Pfam profile PF00412: LIM domain" 5 1 10 25 At2g39960 "microsomal signal peptidase 25 kDa subunit, putative (SPC25) identical to Probable microsomal signal peptidase 25 kDa subunit (EC 3.4.-.-) (SPase 25 kDa subunit) (SPC25) (Swiss-Prot:P58684) [Arabidopsis thaliana]; contains non-consensus AT-AC splice sites; contains 1 transmembrane domain;" 5 1 11 1 At2g40095 expressed protein 5 1 11 2 At2g40116 phosphoinositide-specific phospholipase C family protein contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 5 1 11 3 At2g40260 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 11 4 At2g40316 expressed protein 5 1 11 5 At2g40450 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain 5 1 11 6 At2g40500 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 11 7 At2g43060 expressed protein similar to cDNA bHLH transcription factor (bHLH zeta gene) GI:32563005 5 1 11 8 At2g43120 "pirin, putative similar to SP|O00625 Pirin {Homo sapiens}; contains Pfam profile PF02678: Pirin" 5 1 11 9 At2g43255 expressed protein 5 1 11 10 At2g43320 expressed protein 5 1 11 11 At2g43500 RWP-RK domain-containing protein low similarity to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 5 1 11 12 At2g43550 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 5 1 11 13 At2g43710 "acyl-[acyl-carrier-protein] desaturase / stearoyl-ACP desaturase (SSI2) identical to gi:15149310; contains Pfam profile PF03405: Fatty acid desaturase; identical to cDNA stearoyl ACP desaturase (SSI2), SSI2-FAB2 allele, GI:15149309" 5 1 11 14 At2g43760 "molybdopterin biosynthesis MoaE family protein contains Pfam profile: PF02391 molybdopterin converting factor, subunit 2" 5 1 11 15 At2g46400 WRKY family transcription factor 5 1 11 16 At2g46455 "cytochrome oxidase biogenesis protein-related contains weak similarity to Swiss-Prot:P39952 cytochrome oxidase biogenesis protein OXA1, mitochondrial precursor [Saccharomyces cerevisiae]" 5 1 11 17 At2g46600 "calcium-binding protein, putative similar to EF-hand Ca2+-binding protein CCD1 [Triticum aestivum] GI:9255753" 5 1 11 18 At2g46650 "cytochrome b5, putative similar to cytochome b5 GI:2695711 from [Olea europaea]" 5 1 11 19 At2g46800 "zinc transporter (ZAT) identical to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 5 1 11 20 At2g46860 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase" 5 1 11 21 At2g47000 "multidrug resistant (MDR) ABC transporter, putative similar to multidrug-resistant protein CjMDR1 [Coptis japonica] GI:14715462, MDR-like p-glycoprotein [Arabidopsis thaliana] GI:24324262; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 5 1 11 22 At2g47060 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 5 1 11 23 At3g02370 expressed protein ; expression supported by MPSS 5 1 11 24 At3g02430 hypothetical protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 5 1 11 25 At3g02560 40S ribosomal protein S7 (RPS7B) similar to ribosomal protein S7 GB:AAD26256 from [Secale cereale] 5 1 12 1 At3g02610 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Spinacia oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 5 1 12 2 At3g02790 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 5 1 12 3 At3g02850 "stelar K+ outward rectifier (SKOR) / potassium channel protein identical to SKOR [Arabidopsis thaliana] gi|3810676|emb|CAA11280; member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+ channel family, PMID:11500563" 5 1 12 4 At3g03000 "calmodulin, putative similar to calmodulin SP:P04352 from [Chlamydomonas reinhardtii]; contains Pfam profile: PF00036 EF hand (4 copies)" 5 1 12 5 At3g03060 "AAA-type ATPase family protein contains a ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017" 5 1 12 6 At3g05675 expressed protein 5 1 12 7 At3g05700 "drought-responsive family protein contains similarity to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 5 1 12 8 At3g05860 MADS-box protein (AGL45) similar to MADS-box protein; PMID: 12837945; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 5 1 12 9 At3g05910 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 5 1 12 10 At3g06040 "ribosomal protein L12 family protein contains similarity to 50S ribosomal protein L12-C, chloroplast precursor GB:P36212 from [Arabidopsis thaliana]" 5 1 12 11 At3g06080 expressed protein identical to unknown protein GB:AAF30301 from [Arabidopsis thaliana] 5 1 12 12 At3g06220 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 5 1 12 13 At3g06280 hypothetical protein 5 1 12 14 At3g09210 KOW domain-containing transcription factor family protein ; est match 5 1 12 15 At3g09270 "glutathione S-transferase, putative similar to glutathione transferase GB:CAA71784 [Glycine max]" 5 1 12 16 At3g09440 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis thaliana} 5 1 12 17 At3g09500 60S ribosomal protein L35 (RPL35A) similar to 60S ribosomal protein L35 GB:AAC27830 5 1 12 18 At3g09690 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 1 12 19 At3g09740 "syntaxin 71 (SYP71) identified as syntaxin of plants 71 (SYP71) in Sanderfoot, A.A., et al, Plant Physiology 124:1558-69(2000); identical to SP|Q9SF29 Syntaxin 71 (AtSYP71) {Arabidopsis thaliana}" 5 1 12 20 At3g09880 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B' (B'beta) identical to B' regulatory subunit of PP2A [Arabidopsis thaliana] GI:2160692; similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 5 1 12 21 At3g09925 pollen Ole e 1 allergen and extensin family protein contains similarity to pistil-specific extensin-like protein precursor (PELP) [Nicotiana tabacum] SWISS-PROT:Q03211 5 1 12 22 At3g12300 expressed protein 5 1 12 23 At3g12360 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 5 1 12 24 At3g12540 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 5 1 12 25 At3g12590 expressed protein 5 1 13 1 At3g12750 "zinc transporter (ZIP1) identical to putative zinc transporter GB:AAC24197 from [Arabidopsis thaliana], ( Proc. Natl. Acad. Sci. U.S.A. 95 (12), 7220-7224 (1998)); member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 5 1 13 2 At3g12810 "SNF2 domain-containing protein / helicase domain-containing protein similar to transcriptional activator SRCAP [Homo sapiens] GI:5106572; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 5 1 13 3 At3g12980 histone acetyltransferase 5 (HAC5) identical to HAC5 (GI:21105780) [Arabidopsis thaliana]; similar to CREB-binding protein GB:S39162 from [Homo sapiens] 5 1 13 4 At3g13040 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 13 5 At3g15352 cytochrome c oxidase copper chaperone-related contains similarity to cytochrome c oxidase copper chaperone [Mus musculus] SWISS-PROT:P56394 5 1 13 6 At3g15380 choline transporter-related contains weak similarity to CD92 protein [Homo sapiens] gi|16945323|emb|CAC82175 5 1 13 7 At3g15530 expressed protein 5 1 13 8 At3g15590 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat" 5 1 13 9 At3g15740 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 1 13 10 At3g15800 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 5 1 13 11 At3g15960 DNA mismatch repair MutS family protein contains Pfam profile PF05188: MutS domain II 5 1 13 12 At3g16000 matrix-localized MAR DNA-binding protein-related similar to matrix-localized MAR DNA binding protein MFP1 GI:1771158 from [Lycopersicon esculentum] 5 1 13 13 At3g18680 aspartate/glutamate/uridylate kinase family protein similar to UMP-kinase GB:CAB38122 gi:4468612 from [Lactococcus lactis] ; contains Pfam profile PF00696: Amino acid kinase family 5 1 13 14 At3g18720 F-box family protein contains Pfam PF00646: F-box domain 5 1 13 15 At3g18860 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] 5 1 13 16 At3g18910 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 5 1 13 17 At3g19070 cell wall protein-related similar to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; 5 1 13 18 At3g19130 "RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] GI:9663769, DNA binding protein ACBF GB:AAC49850 from [Nicotiana tabacum]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 1 13 19 At3g19290 "ABA-responsive element-binding protein 2 (AREB2) almost identical (one amino acid) to GB:AAF27182 from (Arabidopsis thaliana); contains Pfam profile PF00170:bZIP transcription factor; identical to cDNA abscisic acid responsive elements-binding factor (ABRE) mRNA, partial cds GI:6739282" 5 1 13 20 At3g19340 expressed protein 5 1 13 21 At3g22040 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 5 1 13 22 At3g22100 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 1 13 23 At3g22260 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 5 1 13 24 At3g22320 "DNA-directed RNA polymerase, putative similar to SP|P19388 DNA-directed RNA polymerase II 23 kDa polypeptide (EC 2.7.7.6) {Homo sapiens}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 5 1 13 25 At3g22440 hydroxyproline-rich glycoprotein family protein identical to hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|9293881|dbj|BAB01784 5 1 14 1 At3g22480 "prefoldin-related KE2 family protein similar to Swiss-Prot:Q9UHV9 prefoldin subunit 2 (Protein HSPC231) [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 5 1 14 2 At3g22670 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 14 3 At3g22730 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to hypothetical protein GB:AAD25583 from [Arabidopsis thaliana] 5 1 14 4 At3g25650 "Skp1 family protein similar toSkp1 [Medicago sativa] GI:4959710, fimbriata-associated protein [Antirrhinum majus] GI:2673870, UIP2 [Arabidopsis thaliana] GI:3719211; contains Pfam profile PF01466: Skp1 family, dimerisation domain" 5 1 14 5 At3g25700 "chloroplast nucleoid DNA-binding protein-related contains weak similarity to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 5 1 14 6 At3g25850 DC1 domain-containing protein similar to unknown protein GB:AAC79144 from [Arabidopsis thaliana] 5 1 14 7 At3g25890 "AP2 domain-containing transcription factor, putative " 5 1 14 8 At3g26040 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], alcohol acyltransferase [Fragaria x ananassa][GI:10121328][PMID:10810141]" 5 1 14 9 At3g26090 expressed protein 5 1 14 10 At3g26220 "cytochrome P450 family protein identical to cytochrome P450 monooxygenase (CYP71B3) GB:D78602 [Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52 (1998))" 5 1 14 11 At3g26270 "cytochrome P450 71B25, putative (CYP71B25) identical to Cytochrome P450 71B25 (SP:Q9LTL2) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 5 1 14 12 At3g29000 calcium-binding EF hand family protein similar to calmodulin-like MSS3 GI:9965747 from [Arabidopsis thaliana]; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 5 1 14 13 At3g29035 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 5 1 14 14 At3g29185 expressed protein 5 1 14 15 At3g29220 hypothetical protein 5 1 14 16 At3g29350 two-component phosphorelay mediator 1 (HP1) identical to ATHP1 [Arabidopsis thaliana] GI:4156241 5 1 14 17 At3g29385 hypothetical protein 5 1 14 18 At3g29638 expressed protein ; expression supported by MPSS 5 1 14 19 At3g29700 expressed protein 5 1 14 20 At3g43750 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 5 1 14 21 At3g43800 "glutathione S-transferase, putative glutathione transferase, papaya, PIR:T09781" 5 1 14 22 At3g44010 "40S ribosomal protein S29 (RPS29B) ribosomal protein S29, rat, PIR:S30298" 5 1 14 23 At3g44080 F-box family protein contains F-box domain Pfam:PF00646 5 1 14 24 At3g44230 hypothetical protein 5 1 14 25 At3g44290 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; NAC2 - Arabidopsis thaliana, EMBL:AF201456" 5 1 15 1 At3g44500 "Ulp1 protease family protein similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 5 1 15 2 At3g44560 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 5 1 15 3 At3g47430 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) 5 1 15 4 At3g47470 "chlorophyll A-B binding protein 4, chloroplast / LHCI type III CAB-4 (CAB4) identical to SP|P27521 Chlorophyll A-B binding protein 4, chloroplast precursor (LHCI type III CAB-4) (LHCP) {Arabidopsis thaliana}" 5 1 15 5 At3g47610 expressed protein 5 1 15 6 At3g47670 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase from Arabidopsis thaliana SP|Q43867, Phaseolus vulgaris SP|Q43111; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 5 1 15 7 At3g47830 HhH-GPD base excision DNA repair protein-related 5 1 15 8 At3g47870 LOB domain family protein / lateral organ boundaries domain family protein (LBD27) identical to SP|Q9STS6 Putative LOB domain protein 27 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 5 1 15 9 At3g48050 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 5 1 15 10 At3g48100 "two-component responsive regulator / response regulator 5 (ARR5) / response reactor 2 (RR2) identical to responce reactor2 (AtRR2) [Arabidopsis thaliana] GI:3273198, response regulator 5 (ARR5) [Arabidopsis thaliana] GI:3953599; contains Pfam profile: PF00072 response regulator receiver domain" 5 1 15 11 At3g50990 "peroxidase, putative similar to peroxidase ATP6a [Arabidopsis thaliana] gi|1429215|emb|CAA67310" 5 1 15 12 At3g51040 expressed protein contains Pfam PF05608: Protein of unknown function (DUF778) 5 1 15 13 At3g51210 flavonol 3-sulfotransferase-related contains weak similarity to Swiss-Prot:P52836 flavonol 3-sulfotransferase (F3-ST) [Flaveria chloraefolia] 5 1 15 14 At3g51270 RIO1 family protein contains Pfam profile PF01163: RIO1 family 5 1 15 15 At3g51430 "strictosidine synthase, putative (YLS2) similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088; identical to cDNA YLS2 mRNA for strictosidine synthase-like protein GI:13122281" 5 1 15 16 At3g51490 sugar transporter family protein similar to D-xylose proton-symporter [Lactobacillus brevis] GI:2895856; contains Pfam profile PF00083: major facilitator superfamily protein 5 1 15 17 At3g51650 expressed protein 5 1 15 18 At3g51710 "curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein contains Pfam profiles: PF01453 lectin (probable mannose binding), PF00024 PAN domain" 5 1 15 19 At3g54180 cell division control protein 2 homolog B (CDC2B) identical to cell division control protein 2 homolog B [Arabidopsis thaliana] SWISS-PROT:P25859 5 1 15 20 At3g54240 "hydrolase, alpha/beta fold family protein low similarity to SP|P22862|ESTE_PSEFL Arylesterase (EC 3.1.1.2) (Aryl-ester hydrolase) {Pseudomonas fluorescens}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 1 15 21 At3g54410 expressed protein ; expression supported by MPSS 5 1 15 22 At3g54470 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) identical to SP|Q42586 Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRtase); Orotidine 5'- phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] {Arabidopsis thaliana} 5 1 15 23 At3g54620 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 5 1 15 24 At3g54680 proteophosphoglycan-related contains similarity to proteophosphoglycan [Leishmania major] gi|5420389|emb|CAB46680 5 1 15 25 At3g54850 "armadillo/beta-catenin repeat family protein / U-box domain-containing family protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 5 1 16 1 At3g54890 chlorophyll A-B binding protein / LHCI type I (CAB) identical to chlorophyll A/B-binding protein [Arabidopsis thaliana] GI:16207; contains Pfam profile: PF00504 chlorophyll A-B binding protein 5 1 16 2 At3g57680 peptidase S41 family protein similar to PSII D1 protein processing enzyme (GI::7268527) [Arabidopsis thaliana]; similar to SP|Q55669 Carboxyl-terminal processing protease precursor (Photosystem II D1 protein processing peptidase) (EC 3.4.21.102) [strain PCC 6803] {Synechocystis sp.}; contains Pfam profile PF03572: Peptidase family S41B 5 1 16 3 At3g57740 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 16 4 At3g57890 tubulin-specific chaperone C-related contains weak similarity to Tubulin-specific chaperone C (Tubulin-folding cofactor C) (CFC) (Swiss-Prot:Q15814) [Homo sapiens] 5 1 16 5 At3g57950 "expressed protein hypothetical protein T24P15.9 - Arabidopsis thaliana, PIR:T00927; expression supported by MPSS" 5 1 16 6 At3g58140 phenylalanyl-tRNA synthetase class IIc family protein similar to phenylalanine-tRNA synthetase [Homo sapiens] GI:3983103; contains Pfam profile PF01409: tRNA synthetases class II core domain (F) 5 1 16 7 At3g58200 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 1 16 8 At3g58380 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains weak hit to Pfam PF00917: MATH domain 5 1 16 9 At3g58440 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 1 16 10 At3g61160 shaggy-related protein kinase beta / ASK-beta (ASK2) identical to shaggy-related protein kinase beta SP:O23145 GI:2569931 from [Arabidopsis thaliana] 5 1 16 11 At3g61220 short-chain dehydrogenase/reductase (SDR) family protein similar to carbonyl reductase GI:1049108 from [Mus musculus] 5 1 16 12 At3g61390 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana 5 1 16 13 At3g61420 transcription factor-related low similarity to SP|Q9DBA9 TFIIH basal transcription factor complex p62 subunit {Mus musculus}; contains Pfam profile PF03909: BSD domain 5 1 16 14 At3g61590 "F-box family protein contains weak hit to Pfam PF00646: F-box domain; stamina pistilloidia (Stp) - Pisum sativum, EMBL:AF004843" 5 1 16 15 At3g61640 arabinogalactan-protein (AGP20) 5 1 16 16 At3g61800 expressed protein 5 1 16 17 At3g61850 Dof zinc finger protein DAG1 / Dof affecting germination 1 (DAG1) / transcription factor BBFa (BBFA) identical to SP|Q43385 DOF zinc finger protein DAG1 (Dof affecting germination 1) (Transcription factor BBFa) (AtBBFa) (rolB domain B factor a) {Arabidopsis thaliana} 5 1 16 18 At4g00800 expressed protein contains 1 WD-40 repeat (PF00400); 42% similarity to fimbriae-associated protein Fap1 (gi:3929312) [Streptococcus parasanguinis] 5 1 16 19 At4g00840 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 5 1 16 20 At4g00990 "transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain, PF02373: jmjC domain" 5 1 16 21 At4g01030 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 5 1 16 22 At4g01200 C2 domain-containing protein contains Pfam profile PF00168: C2 domain 5 1 16 23 At4g01240 hypothetical protein 5 1 16 24 At4g01410 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 5 1 16 25 At4g01450 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 5 1 17 1 At4g04210 UBX domain-containing protein similar to XY40 protein [Rattus norvegicus] GI:2547025; contains Pfam profile PF00789: UBX domain 5 1 17 2 At4g04340 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 5 1 17 3 At4g04510 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 5 1 17 4 At4g04580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 17 5 At4g04750 "sugar transporter family protein similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 5 1 17 6 At4g04810 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 5 1 17 7 At4g04960 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 5 1 17 8 At4g05000 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 5 1 17 9 At4g09720 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB7A from [Lotus japonicus]" 5 1 17 10 At4g09770 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 1 17 11 At4g09950 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains Pfam PF04548: AIG1 family; 5 1 17 12 At4g09970 expressed protein 5 1 17 13 At4g10120 "sucrose-phosphate synthase, putative similar to sucrose-phosphate synthase, Zea mays, PIR2:JQ1329; contains non-consensus (GC) donor splice site at intron 4" 5 1 17 14 At4g10170 "synaptobrevin-related family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; vesicle-associated membrane protein 7B, Arabidopsis thaliana, AF025333" 5 1 17 15 At4g10330 glycine-rich protein 5 1 17 16 At4g10390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 17 17 At4g13200 "expressed protein hypothetical protein sll1769 - Synechocystis sp,PID:d1018406" 5 1 17 18 At4g13250 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 5 1 17 19 At4g13360 enoyl-CoA hydratase/isomerase family protein similar to CoA-thioester hydrolase CHY1 (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis thaliana] GI:8572760; contains Pfam profile PF00378: enoyl-CoA hydratase/isomerase family protein 5 1 17 20 At4g13420 "potassium transporter (HAK5) identical to K+ transporter HAK5 [Arabidopsis thaliana] gi|7108597|gb|AAF36490; similar to high-affinity potassium transporter AtKUP1p [Arabidopsis thaliana] gi|2688979|gb|AAB88901; KUP/HAK/KT Transporter family member, PMID:11500563" 5 1 17 21 At4g13580 disease resistance-responsive family protein contains similarity to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 5 1 17 22 At4g13630 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 5 1 17 23 At4g13790 "auxin-responsive protein, putative similar to small auxin up RNA (SAUR-AC1) (SP:S70188) [Arabidopsis thaliana]" 5 1 17 24 At4g13830 "DNAJ heat shock N-terminal domain-containing protein (J20) identical to DnaJ-like protein [Arabidopsis thaliana] GI:6691127; similar to SP|Q05646 Chaperone protein dnaJ Erysipelothrix rhusiopathiae, J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain" 5 1 17 25 At4g16180 expressed protein ; expression supported by MPSS 5 1 18 1 At4g16220 GDSL-motif lipase/hydrolase protein-related similar to family II lipase EXL5 [Arabidopsis thaliana] GI:15054392 5 1 18 2 At4g16390 "chloroplastic RNA-binding protein P67, putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842" 5 1 18 3 At4g16442 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 5 1 18 4 At4g16563 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 5 1 18 5 At4g16610 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 1 18 6 At4g16740 "terpene synthase/cyclase family protein similar to myrcene/ocimene synthase [GI:9957293]; contains Pfam profile PF01397: Terpene synthase, N-terminal domain; contains Pfam profile PF03936: Terpene synthase family, metal binding domain; identical to cDNA (partial mRNA) E-beta-ocimene synthase GI:30349137" 5 1 18 7 At4g16765 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|P40902 isp7 from Schizosaccharomyces pombe, GI:475959 flavanone-3-hydroxylase (naringenin 3-dioxygenase) from Medicago sativa, GI:1944197 flavanone 3-hydroxylase from Perilla frutescens; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 5 1 18 8 At4g19310 "Ulp1 protease family protein similar to At5g36030, At1g35110; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 5 1 18 9 At4g19370 hypothetical protein 5 1 18 10 At4g19530 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 1 18 11 At4g19590 "DNAJ heat shock N-terminal domain-containing protein protein YJL162c, Saccharomyces cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ domain;" 5 1 18 12 At4g19730 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:505267 from [Nicotiana tabacum]" 5 1 18 13 At4g19810 glycosyl hydrolase family 18 protein similar to chitinase/lysozyme GI:467689 from [Nicotiana tabacum] 5 1 18 14 At4g19970 "expressed protein similar to GI:2827651, GI:7527728, GI:4406788, GI:6063544, GI:10764853, GI:10764852 from [Arabidopsis thaliana]; predicted protein PATCHX:E326963" 5 1 18 15 At4g20020 expressed protein 5 1 18 16 At4g22820 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 5 1 18 17 At4g22870 "leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative similar to SP|P51091 [Malus domestica]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 5 1 18 18 At4g23020 expressed protein ; expression supported by MPSS 5 1 18 19 At4g23080 "expressed protein predicted protein, Arabidopsis thaliana" 5 1 18 20 At4g23230 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 5 1 18 21 At4g23290 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 5 1 18 22 At4g23450 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 5 1 18 23 At4g23493 expressed protein 5 1 18 24 At4g26070 "mitogen-activated protein kinase kinase (MAPKK) (MKK1) (MEK1) identical to MEK1 [Arabidopsis thaliana] gi|2196704|gb|AAB97145; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 5 1 18 25 At4g26100 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 5 1 19 1 At4g26250 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 [Ajuga reptans] GI:5608497; contains Pfam profile: PF01501 glycosyl transferase family 8" 5 1 19 2 At4g26310 elongation factor P (EF-P) family protein similar to SP|Q45288 Elongation factor P (EF-P) {Corynebacterium glutamicum}; contains Pfam profile PF01132: Elongation factor P (EF-P) 5 1 19 3 At4g26460 hypothetical protein 5 1 19 4 At4g26510 uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) nearly identical to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana} 5 1 19 5 At4g26640 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 5 1 19 6 At4g26700 fimbrin-like protein (FIM1) identical to fimbrin-like protein (ATFIM1) [Arabidopsis thaliana] GI:2905893 5 1 19 7 At4g29280 expressed protein ; expression supported by MPSS 5 1 19 8 At4g29340 profilin 3 (PRO3) (PFN3) identical to profilin 3 SP:Q38904 GI:1353765 from [Arabidopsis thaliana] 5 1 19 9 At4g29500 prolidase-related contains similarity to prolidase GI:3114966 from [Suberites domuncula] 5 1 19 10 At4g29560 expressed protein 5 1 19 11 At4g29720 "amine oxidase family protein similar to polyamine oxidase isoform-2 [Homo sapiens] GI:16554963; contains Pfam profile PF01593: amine oxidase, flavin-containing" 5 1 19 12 At4g29760 hypothetical protein 5 1 19 13 At4g29910 origin recognition complex subunit 5-related (ORC5) contains weak similarity to Origin recognition complex subunit 5 (Swiss-Prot:Q9WUV0) [Mus musculus] 5 1 19 14 At4g29970 F-box family protein contains F-box domain Pfam:PF00646 5 1 19 15 At4g32470 "ubiquinol-cytochrome C reductase complex 14 kDa protein, putative similar to SP|P48502 Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam profile PF02271: Ubiquinol-cytochrome C reductase complex 14kD subunit" 5 1 19 16 At4g32530 "vacuolar ATP synthase, putative / V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22 kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces cerevisiae}; contains Pfam profile PF00137: ATP synthase subunit C" 5 1 19 17 At4g32660 protein kinase (AFC3) (AME3) identical to protein kinase AFC3 [Arabidopsis thaliana] SWISS-PROT:P51568 5 1 19 18 At4g32720 "RNA recognition motif (RRM)-containing protein RNA-binding protein LAH1, Saccharomyces cerevisiae, PIR2:B48600; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 1 19 19 At4g32870 "expressed protein hypothetical protein F17H15.20 Arabidopsis thaliana chromosome II BAC F17H15, PID:g3643606" 5 1 19 20 At4g32910 expressed protein 5 1 19 21 At4g33060 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 5 1 19 22 At4g33120 "coclaurine N-methyltransferase, putative similar to coclaurine N-methyltransferase [Coptis japonica] GI:16754879" 5 1 19 23 AT5G57480 PC-1 A08 5 1 19 24 3XSSC PC-1 A20 5 1 19 25 AT1G29930 PC-1 E08 5 1 20 1 3XSSC PC-1 E20 5 1 20 2 AT3G44150 PC-1 I08 5 1 20 3 3XSSC PC-1 I20 5 1 20 4 AT4G00810 PC-1 M08 5 1 20 5 3XSSC PC-1 M20 5 1 20 6 At4g35725 expressed protein 5 1 20 7 At4g35780 "protein kinase family protein similar to protein kinase [gi:170047] from Glycine max, [gi:13124865] from Arachis hypogaea; contains Pfam protein kinase domain PF00069" 5 1 20 8 At4g35910 expressed protein 5 1 20 9 At4g35970 "L-ascorbate peroxidase, putative similar to ascorbate peroxidase [Gossypium hirsutum] gi|1019946|gb|AAB52954; identical to putative ascorbate peroxidase APX5 (AT4g35970) mRNA, partial cds GI:31980501; contains Pfam domain PF00141: Peroxidase" 5 1 20 10 At4g36090 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to At2g17970, At2g17960; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 5 1 20 11 At4g36140 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 1 20 12 At4g36360 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 5 1 20 13 At4g36400 "FAD linked oxidase family protein low similarity to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 5 1 20 14 At4g39040 expressed protein contains PF01985: Uncharacterised protein family 5 1 20 15 At4g39090 "cysteine proteinase RD19a (RD19A) / thiol protease identical to cysteine proteinase RD19a, thiol protease SP:P43296, GI:435618 from [Arabidopsis thaliana]" 5 1 20 16 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 5 1 20 17 At4g39270 "leucine-rich repeat transmembrane protein kinase, putative receptor protein kinase erecta, Arabidopsis thaliana" 5 1 20 18 At4g39390 transporter-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593 5 1 20 19 At4g39450 expressed protein 5 1 20 20 At4g39610 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 5 1 20 21 At4g39670 expressed protein 5 1 20 22 At5g03170 fasciclin-like arabinogalactan-protein (FLA11) 5 1 20 23 At5g03230 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 5 1 20 24 At5g03400 hypothetical protein 5 1 20 25 At5g03440 expressed protein 5 1 21 1 At5g03580 "polyadenylate-binding protein, putative / PABP, putative similar to poly(A)-binding protein [Triticum aestivum] GI:1737492; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 1 21 2 At5g03640 "protein kinase family protein contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 5 1 21 3 At5g03820 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386) and EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 5 1 21 4 At5g03880 expressed protein 5 1 21 5 At5g06470 glutaredoxin family protein similar to Glutaredoxin 3 (Grx3) (SP:P37687) {Escherichia coli O157:H7}; contains Pfam profile PF00462: Glutaredoxin 5 1 21 6 At5g06530 ABC transporter family protein 5 1 21 7 At5g06690 thioredoxin family protein low similiarity to SP|P34723 Thioredoxin {Penicillium chrysogenum}; contains Pfam profile: PF00085 Thioredoxin 5 1 21 8 At5g06740 "lectin protein kinase family protein contains Legume lectins beta-chain signature, PROSITE:PS00307 and Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 5 1 21 9 At5g06910 "DNAJ heat shock protein, putative (J6) identical to DnaJ homologue [Arabidopsis thaliana] GI:2689720; contains Pfam profile PF00226 DnaJ domain" 5 1 21 10 At5g06970 expressed protein 5 1 21 11 At5g07110 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 5 1 21 12 At5g07170 hypothetical protein 5 1 21 13 At5g10270 "cyclin-dependent kinase, putative / CDK, putative similar to cyclin dependent kinase C [Lycopersicon esculentum] gi|15215944|emb|CAC51391" 5 1 21 14 At5g10330 "histidinol-phosphate aminotransferase, putative similar to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562] from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]" 5 1 21 15 At5g10490 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 5 1 21 16 At5g10550 DNA-binding bromodomain-containing protein low similarity to kinase [Gallus gallus] GI:1370092; contains Pfam profile PF00439: Bromodomain 5 1 21 17 At5g10700 expressed protein 5 1 21 18 At5g10740 "protein phosphatase 2C-related / PP2C-related protein phosphatase 2C, alfalfa, PIR:T09640" 5 1 21 19 At5g10910 mraW methylase family protein contains Pfam profile PF01795: MraW methylase family 5 1 21 20 At5g10970 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type domain, Prosite:PS00028" 5 1 21 21 At5g14090 hypothetical protein 5 1 21 22 At5g14140 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 5 1 21 23 At5g14320 "30S ribosomal protein S13, chloroplast (CS13) ribosomal protein S13 precursor, chloroplast Arabidopsis thaliana, PIR:S59594; identical to cDNA ribosomal protein S13 GI:1515106" 5 1 21 24 At5g14380 hydroxyproline-rich glycoprotein family protein identical to gi|4775268|emb|CAB42531 5 1 21 25 At5g14550 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 5 1 22 1 At5g14580 "polyribonucleotide nucleotidyltransferase, putative similar to Swiss-Prot:P05055 polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) [Escherichia coli]" 5 1 22 2 At5g14760 "L-aspartate oxidase family protein similar to L-aspartate oxidase, Escherichia coli [SP|P10902]; contains Pfam profiles PF00890 FAD binding domain, PF02910 Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain" 5 1 22 3 At5g14850 "mannosyltransferase, putative similar to PIGB from Homo sapiens [gi:1552169], Mus musculus [gi:7634741]" 5 1 22 4 At5g17520 root cap 1 (RCP1) identical to GI:6137138 5 1 22 5 At5g17560 BolA-like family protein contains Pfam profile: PF01722 BolA-like protein 5 1 22 6 At5g17720 "hydrolase, alpha/beta fold family protein low similarity to SP|P27747 Dihydrolipoamide acetyltransferase component of acetoin cleaving system (EC 2.3.1.12) [Ralstonia eutropha] {Alcaligenes eutrophus}, SP|P24640 Lipase 3 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Moraxella sp}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 1 22 7 At5g17760 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 5 1 22 8 At5g17950 hypothetical protein 5 1 22 9 At5g18010 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 5 1 22 10 At5g18160 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to Probable disease resistance RPP8-like protein 2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana] 5 1 22 11 At5g18220 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 5 1 22 12 At5g20770 hypothetical protein 5 1 22 13 At5g20850 "DNA repair protein RAD51, putative identical to Rad51-like protein [Arabidopsis thaliana] GI:2388778; strong similarity to SP|Q06609 DNA repair protein RAD51 homolog 1 {Homo sapiens}; contains Pfam profile PF00633: Helix-hairpin-helix motif" 5 1 22 14 At5g20990 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) identical to SP|Q39054 Molybdopterin biosynthesis CNX1 protein (Molybdenum cofactor biosynthesis enzyme CNX1) {Arabidopsis thaliana} 5 1 22 15 At5g21060 "homoserine dehydrogenase family protein similar to aspartokinase-homoserine dehydrogenase [Glycine max] GI:2970447, GI:2970556; contains Pfam profile PF00742: Homoserine dehydrogenase" 5 1 22 16 At5g21482 "cytokinin oxidase, putative (CKX5) contains Pfam profile: PF01565 FAD binding domain; identical to cytokinin oxidase (CKX5) [Arabidopsis thaliana] gi|11120514|gb|AAG30908; similar to Swiss-Prot:Q9LTS3 cytokinin oxidase 3 precursor (CKO 3)[Arabidopsis thaliana]" 5 1 22 17 At5g21950 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas fluorescens] GI:1871461, hydrolase EtbD2 [Rhodococcus sp.] GI:3273241; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 1 22 18 At5g22090 expressed protein 5 1 22 19 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 5 1 22 20 At5g24770 vegetative storage protein 2 (VSP2) identical to SP|O82122 Vegetative storage protein 2 precursor {Arabidopsis thaliana}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 5 1 22 21 At5g24830 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 22 22 At5g25000 hypothetical protein 5 1 22 23 At5g25060 "RNA recognition motif (RRM)-containing protein KIAA0332 - Homo sapiens, EMBL:AB002330" 5 1 22 24 At5g25240 expressed protein 5 1 22 25 At5g25280 serine-rich protein-related contains some similarity to serine-rich proteins 5 1 23 1 At5g25425 glycine-rich protein 5 1 23 2 At5g25470 expressed protein 5 1 23 3 At5g28460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 1 23 4 At5g28490 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 5 1 23 5 At5g28650 "WRKY family transcription factor DNA-binding protein WRKY3, parsley, PIR:S72445" 5 1 23 6 At5g28740 transcription-coupled DNA repair protein-related similar to XAB2 (XPA-binding protein 2) [Homo sapiens] GI:10566459 5 1 23 7 At5g28890 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 5 1 23 8 At5g28950 hypothetical protein 5 1 23 9 At5g30495 expressed protein 5 1 23 10 At5g31412 "hypothetical protein contains Pfam domain, PF04937: Protein of unknown function (DUF 659)" 5 1 23 11 At5g37475 translation initiation factor-related similar to Eukaryotic translation initiation factor 3 subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j) (Swiss-Prot:O75822) [Homo sapiens] 5 1 23 12 At5g37510 "NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644]" 5 1 23 13 At5g37680 "ADP-ribosylation factor, putative ADP-ribosylation factor, Leishmania major, EMBL:LMFP1421 and ADP-ribosylation factor-like protein 1 (ARL1) (SP:P40616) Homo sapiens; contains PF00025: ADP-ribosylation factor family" 5 1 23 14 At5g37750 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 5 1 23 15 At5g37930 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 5 1 23 16 At5g37990 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292], caffeine synthase [Camellia sinensis][GI:9967143], SAM:jasmonic acid carboxyl methyltransferase [GI:13676829]" 5 1 23 17 At5g38160 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 5 1 23 18 At5g38210 "serine/threonine protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 5 1 23 19 At5g41080 glycerophosphoryl diester phosphodiesterase family protein weak similarity to SP|P37965 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) {Bacillus subtilis}; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 5 1 23 20 At5g41100 expressed protein 5 1 23 21 At5g41290 receptor-like protein kinase-related contains weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]; contains Pfam PF01657: Domain of unknown function 5 1 23 22 At5g41340 "ubiquitin-conjugating enzyme 4 (UBC4) E2; identical to gi:431265, SP:P42748" 5 1 23 23 At5g41520 40S ribosomal protein S10 (RPS10B) contains similarity to 40S ribosomal protein S10 5 1 23 24 At5g41580 zinc finger (MIZ type) family protein contains Pfam domain PF02891: MIZ zinc finger 5 1 23 25 At5g41720 F-box family protein contains Pfam PF00646: F-box domain; similar to unknown protein (gb|AAD32901.1); 5 1 24 1 At5g41770 "crooked neck protein, putative / cell cycle protein, putative similar to Swiss-Prot:P17886 crooked neck protein [Drosophila melanogaster]" 5 1 24 2 At5g44420 "plant defensin protein, putative (PDF1.2a) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 5 1 24 3 At5g44480 "NAD-dependent epimerase/dehydratase family protein similar to SP|P55180 UDP-glucose 4-epimerase (EC 5.1.3.2) from Bacillus subtilis, GI:3021357 UDP-galactose 4-epimerase from Cyamopsis tetragonoloba; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 5 1 24 4 At5g44635 minichromosome maintenance family protein / MCM family protein similar to SP|P97311 DNA replication licensing factor MCM6 {Mus musculus}; contains Pfam profile PF00493: MCM2/3/5 family 5 1 24 5 At5g44690 hypothetical protein 5 1 24 6 At5g44820 expressed protein similar to unknown protein (pir||T04881) 5 1 24 7 At5g44880 hypothetical protein similar to unknown protein (pir||T00729) 5 1 24 8 At5g45040 cytochrome c6 (ATC6) identical to c6 type cytochrome [Arabidopsis thaliana] gi|19571824|emb|CAD27418 5 1 24 9 At5g45095 expressed protein 5 1 24 10 At5g47620 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative " 5 1 24 11 At5g47670 CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) supporting cDNA gi|27372446|gb|AY138461.1|; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; contains similarity to CCAAT-binding transcription factor subunit A (CBF-A) (NF-Y protein chain B) (NF-YB) (CAAT-box DNA binding protein subunit B) (Swiss-Prot:P25209) [Zea mays] 5 1 24 12 At5g47830 expressed protein 5 1 24 13 At5g47870 expressed protein 5 1 24 14 At5g48050 hypothetical protein low similarity to copia-like polyprotein [Arabidopsis thaliana] GI:13872712 5 1 24 15 At5g48110 terpene synthase/cyclase family protein 5 1 24 16 At5g48280 hypothetical protein 5 1 24 17 At5g48335 expressed protein 5 1 24 18 At5g51010 rubredoxin family protein similar to SP|P04170 Rubredoxin (Rd) {Desulfovibrio desulfuricans}; contains Pfam profile PF00301: Rubredoxin 5 1 24 19 At5g51070 "ATP-dependent Clp protease ATP-binding subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1 protein GI:497629, SP:P42762 from [Arabidopsis thaliana]; contains Pfam profile PF02861: Clp amino terminal domain" 5 1 24 20 At5g51210 glycine-rich protein / oleosin 5 1 24 21 At5g51260 "acid phosphatase, putative similar to acid phosphatase-1(1); Apase-1(1) [Lycopersicon esculentum] GI:7705154, acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase" 5 1 24 22 At5g51420 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein contains similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 5 1 24 23 At5g51480 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase; similar to pollen-specific protein 5 1 24 24 At5g51630 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 1 24 25 At5g51680 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; similar to hydroxyproline-rich Glycoprotein (HRGP) [Zea mays] gi|4007865|emb|CAA10387" 5 1 25 1 At5g54430 "universal stress protein (USP) family protein low similarity to early nodulin ENOD18 [Vicia faba] GI:11602747, ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family" 5 1 25 2 At5g54490 "calcium-binding EF-hand protein, putative similar to EF-hand Ca2+-binding protein CCD1 [Triticum aestivum] GI:9255753; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 5 1 25 3 At5g54620 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 5 1 25 4 At5g54680 basic helix-loop-helix (bHLH) family protein similar to unknown protein (pir |B71406) 5 1 25 5 At5g54840 GTP-binding family protein similar to SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase spg1)(Sid3 protein) {Schizosaccharomyces pombe} 5 1 25 6 At5g54880 "DTW domain-containing protein contains Pfam domain, PF03942: DTW domain" 5 1 25 7 At5g55020 myb family transcription factor (MYB120) contains Pfam profile: PF00249 myb-like DNA-binding domain 5 1 25 8 At5g55080 "Ras-related GTP-binding protein, putative similar to GTP-binding protein atran3 GI:2058280 from [Arabidopsis thaliana]" 5 1 25 9 At5g57760 expressed protein 5 1 25 10 At5g57810 senescence-associated protein-related similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 5 1 25 11 At5g57940 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC5) identical to cyclic nucleotide and calmodulin-regulated ion channel (cngc5) GI:4581205 from [Arabidopsis thaliana] 5 1 25 12 At5g58000 "phosphatase-related weak similarity to CTD phosphatase-like 3 [Arabidopsis thaliana] GI:22212705; contains Pfam profiles PF02453: Reticulon, PF00533: BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting factor" 5 1 25 13 At5g58160 formin homology 2 domain-containing protein / FH2 domain-containing protein low similarity to SP|Q05858 Formin (Limb deformity protein) {Gallus gallus}; contains Pfam profile PF02181: Formin Homology 2(FH2) Domain 5 1 25 14 At5g58210 hydroxyproline-rich glycoprotein family protein 5 1 25 15 At5g58350 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 1 25 16 At5g58380 CBL-interacting protein kinase 10 (CIPK10) identical to CBL-interacting protein kinase 10 [Arabidopsis thaliana] gi|13249119|gb|AAK16685; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 10 (CIPK10) GI:13249118 5 1 25 17 At5g60980 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein G3BP ras-GTPase-activating protein SH3-domain binding protein, Mus musculus, EMBL:MMU65313" 5 1 25 18 At5g61030 "RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana sylvestris] GI:624925; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 1 25 19 At5g61190 "zinc finger protein-related contains Pfam profile PF04396: Protein of unknown function DUF537, weak hit to PF00096: Zinc finger C2H2 type" 5 1 25 20 At5g61250 glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase GI:8918740 from [Scutellaria baicalensis] 5 1 25 21 At5g61410 "ribulose-phosphate 3-epimerase, chloroplast, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to SP|Q43157 Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) {Spinacia oleracea}; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family" 5 1 25 22 At5g61450 2-phosphoglycerate kinase-related contains weak similarity to 2-phosphoglycerate kinase (GI:467751) [Methanothermus fervidus] 5 1 25 23 At5g61590 AP2 domain-containing transcription factor family protein contains Pfam PF00847: AP2 domain 5 1 25 24 At5g61640 "peptide methionine sulfoxide reductase, putative similar to peptide methionine sulfoxide reductase (msr) [Arabidopsis thaliana] GI:4884033; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase" 5 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 5 1 26 1 At5g64390 KH domain-containing RNA-binding protein (HEN4) contains similarity to RNA-binding protein; identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404; contains Pfam domain PF00013: KH domain; identical to cDNA HEN4 (HEN4) GI:28261402 5 1 26 2 At5g64520 DNA repair protein-related contains weak similarity to DNA-repair protein XRCC2 (X-ray repair cross-complementing protein 2) (Swiss-Prot:O43543) [Homo sapiens] 5 1 26 3 At5g64570 glycosyl hydrolase family 3 protein 5 1 26 4 At5g64710 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 5 1 26 5 At5g64760 "26S proteasome regulatory subunit, putative (RPN5) " 5 1 26 6 At5g64900 expressed protein 5 1 26 7 At5g64950 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 5 1 26 8 At5g67460 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:6714534 from [Salix gilgiana]" 5 1 26 9 At5g67510 60S ribosomal protein L26 (RPL26B) 5 1 26 10 At1g25097 "expressed protein nearly identical to At1g24996, At1g25170, At1g24822; similar to ESTs dbj AV530941.1, dbj|AV530975.1, gb|BE037999.1, gb|BE037993.1, gb|AI995009.1, gb|AI099531.1, gb|N37906.1, gb|T76894.1" 5 1 26 11 At1g59359 40S ribosomal protein S2 (RPS2B) similar to ribosomal protein S2 GI:430711 from [Drosophila melanogaster] 5 1 26 12 ath-MIR170 miRNA gene Arabidopsis thaliana miR170 stem-loop 5 1 26 13 ath-MIR167c miRNA gene Arabidopsis thaliana miR167c stem-loop 5 1 26 14 ath-MIR167a miRNA gene Arabidopsis thaliana miR167a stem-loop 5 1 26 15 ath-MIR319b miRNA gene Arabidopsis thaliana miR319b stem-loop 5 1 26 16 At3g43750 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 5 1 26 17 At3g43800 "glutathione S-transferase, putative glutathione transferase, papaya, PIR:T09781" 5 1 26 18 At3g44010 "40S ribosomal protein S29 (RPS29B) ribosomal protein S29, rat, PIR:S30298" 5 1 26 19 At3g44080 F-box family protein contains F-box domain Pfam:PF00646 5 1 26 20 At3g44230 hypothetical protein 5 1 26 21 At3g44290 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; NAC2 - Arabidopsis thaliana, EMBL:AF201456" 5 1 26 22 At3g44500 "Ulp1 protease family protein similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 5 1 26 23 At3g44560 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 5 1 26 24 Blank Blank 5 1 26 25 Blank Blank 5 2 1 1 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 5 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 5 2 1 3 Alien3 Control: Stratagene Spotreport Alien Oligo 5 2 1 4 Alien9 Control: Stratagene Spotreport Alien Oligo 5 2 1 5 atc05 Randomly generated negative control 5 2 1 6 atc11 Randomly generated negative control 5 2 1 7 At5g46430 60S ribosomal protein L32 (RPL32B) 5 2 1 8 atc01 Randomly generated negative control 5 2 1 9 At1g02720 glycosyl transferase family 8 protein low similarity to putative glycosyl transferase from Neisseria gonorrhoeae [GI:595812]; contains Pfam glycosyl transferase family 8 domain PF01501 5 2 1 10 At1g02790 "exopolygalacturonase / galacturan 1,4-alpha-galacturonidase (PGA3) / pectinase identical to SP|P49062 Exopolygalacturonase clone GBGE184 precursor (EC 3.2.1.67) (ExoPG) (Galacturan 1,4-alpha-galacturonidase) {Arabidopsis thaliana}" 5 2 1 11 At1g02880 "thiamin pyrophosphokinase, putative similar to thiamin pyrophosphokinase [Mus musculus] gi|6468206|dbj|BAA87040" 5 2 1 12 At1g02940 "glutathione S-transferase, putative similar to glutathione S-transferase GI:860955 from [Hyoscyamus muticus]" 5 2 1 13 At1g03050 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to CLATHRIN COAT ASSEMBLY PROTEIN AP180 - Mus musculus, SWISSPROT:Q61548" 5 2 1 14 At1g03090 "methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) nearly identical to SP|Q42523 Methylcrotonyl-CoA carboxylase alpha chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase alpha subunit) {Arabidopsis thaliana}" 5 2 1 15 At1g03240 hypothetical protein 5 2 1 16 At1g03300 agenet domain-containing protein contains Pfam PF05641: Agenet domain 5 2 1 17 At1g05970 expressed protein 5 2 1 18 At1g06040 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger 5 2 1 19 At1g06170 basic helix-loop-helix (bHLH) family protein contains Pfam profile:PF00010 helix-loop-helix DNA-binding domain 5 2 1 20 At1g06210 "VHS domain-containing protein / GAT domain-containing protein weak similarity to SP|Q9UJY5 ADP-ribosylation factor binding protein GGA1 {Homo sapiens}; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 5 2 1 21 At1g06390 shaggy-related protein kinase iota / ASK-iota (ASK9) (GSK1) identical to shaggy-related protein kinase iota (ASK-iota) [Arabidopsis thaliana] SWISS-PROT:Q39012 5 2 1 22 At1g06450 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Homo sapiens]" 5 2 1 23 At1g06640 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 5 2 1 24 At1g06670 DEIH-box RNA/DNA helicase identical to DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579 [Arabidopsis thaliana] 5 2 1 25 At1g09170 kinesin motor protein-related similar to GB:AAB61066 5 2 2 1 At1g09230 RNA recognition motif (RRM)-containing protein contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 5 2 2 2 At1g09390 "GDSL-motif lipase/hydrolase family protein Similar to early nodulin ENOD8 [Medicago sativa] GI:304037, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 5 2 2 3 At1g09440 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 2 2 4 At1g09580 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 5 2 2 5 At1g09640 "elongation factor 1B-gamma, putative / eEF-1B gamma, putative Similar to elongation factor 1-gamma (gb|EF1G_XENLA). ESTs gb|T20564,gb|T45940,gb|T04527 come from this gene" 5 2 2 6 At1g09790 phytochelatin synthetase-related contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region 5 2 2 7 At1g09820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 2 8 At1g12400 expressed protein 5 2 2 9 At1g12440 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 5 2 2 10 At1g12640 "membrane bound O-acyl transferase (MBOAT) family protein low similarity to porcupine from [Xenopus laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516; contains Pfam profile PF03062: MBOAT family" 5 2 2 11 At1g12710 F-box family protein / SKP1 interacting partner 3-related contains Pfam profile PF00646: F-box domain 5 2 2 12 At1g12860 "basic helix-loop-helix (bHLH) family protein / F-box family protein contains Pfam profiles: PF00646 F-box domain, PF00010 helix-loop-helix DNA-binding domain" 5 2 2 13 At1g12920 "eukaryotic release factor 1 family protein / eRF1 family protein contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 5 2 2 14 At1g13100 "cytochrome P450 71B29, putative (CYP71B29) strong similarity to gb|X97864 cytochrome P450 and identical to Cytochrome P450 71B29 (SP:Q9SAE4)[Arabidopsis thaliana];PF|00067 Cytochrome P450 family" 5 2 2 15 At1g13160 SDA1 family protein contains Pfam PF05285: SDA1 domain; similar to mystery 45A (GI:16797816){Drosophila melanogaster} 5 2 2 16 At1g15810 ribosomal protein S15 family protein contains similarity to ribosomal protein S15 5 2 2 17 At1g15860 expressed protein 5 2 2 18 At1g16010 "magnesium transporter CorA-like family protein (MRS2-1) low similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 5 2 2 19 At1g16060 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 5 2 2 20 At1g16240 syntaxin 51 (SYP51) identical to SP|Q9SA23 Syntaxin 51 (AtSYP51) {Arabidopsis thaliana}; supporting cDNA gi|13811643|gb|AF355755.1|AF355755 5 2 2 21 At1g16300 "glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative / NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, putative similar to glyceraldehyde-3-phosphate dehydrogenase [Pinus sylvestris] GI:1100223; contains Pfam profiles PF02800: Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain, PF00044: Glyceraldehyde 3-phosphate dehydrogenase NAD binding domain" 5 2 2 22 At1g16460 mercaptopyruvate sulfurtransferase (MST2) (RDH2) identical to mercaptopyruvate sulfurtransferase GI:6009983 and thiosulfate sulfurtransferase GI:5817004 from [Arabidopsis thaliana]; contains PF|00581 Rhodanese-like domain 5 2 2 23 At1g16515 expressed protein 5 2 2 24 At1g19310 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 2 2 25 At1g19370 expressed protein 5 2 3 1 At1g19525 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 3 2 At1g19600 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 5 2 3 3 At1g19780 "cyclic nucleotide-regulated ion channel, putative (CNGC8) similar to cyclic nucleotide and calmodulin-regulated ion channel GI:4581207 from (Arabidopsis thaliana)" 5 2 3 4 At1g19850 transcription factor MONOPTEROS (MP) / auxin-responsive protein (IAA24) / auxin response factor 5 (ARF5) identical to transcription factor MONOPTEROS (MP/IAA24/ARF5) SP:P93024 from [Arabidopsis thaliana] 5 2 3 5 At1g20030 pathogenesis-related thaumatin family protein similar to receptor serine/threonine kinase PR5K [Arabidopsis thaliana] GI:1235680; contains Pfam profile PF00314: Thaumatin family 5 2 3 6 At1g20100 expressed protein 5 2 3 7 At1g22882 expressed protein 5 2 3 8 At1g22910 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); similar to GB:AAC33496 5 2 3 9 At1g23060 expressed protein Location of EST gb|T22158 and gb|AA395675 5 2 3 10 At1g23080 "auxin efflux carrier protein, putative similar to efflux carrier of polar auxin transport [Brassica juncea] gi|12331173|emb|CAC24691" 5 2 3 11 At1g23240 caleosin-related family protein similar to caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]; similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 5 2 3 12 At1g23290 60S ribosomal protein L27A (RPL27aB) similar to 60S RIBOSOMAL PROTEIN L27A GB:P49637 GI:1710530 from [Arabidopsis thaliana] 5 2 3 13 At1g23440 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site 5 2 3 14 At1g23480 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535 isoform contains GG acceptor splice site at intron 1" 5 2 3 15 At1g27170 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 2 3 16 At1g27240 paired amphipathic helix repeat-containing protein low similarity to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 5 2 3 17 At1g27380 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 5 2 3 18 At1g27430 GYF domain-containing protein contains Pfam profile: PF02213 GYF domain 5 2 3 19 At1g27580 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; confirmed by FLcDNA GI:16604421; contains uncharacterized Arabidoppsis domain shared by 33 Arabidopsis proteins;simlar to unknown protein GB:AAC63676" 5 2 3 20 At1g27620 "transferase family protein similar to hypersensitivity-related gene product HSR201 - Nicotiana tabacum, EMBL:X95343; contains Pfam transferase family domain PF00248" 5 2 3 21 At1g27770 "calcium-transporting ATPase 1, plasma membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid envelope ATPase 1 (PEA1) identical to SP|Q37145 Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) {Arabidopsis thaliana}; identical to cDNA envelope Ca2+-ATPase (PEA1) chloroplast gene encoding chloroplast protein GI:509809" 5 2 3 22 At1g27840 transducin family protein / WD-40 repeat family protein contains similarity to cockayne syndrome complementation group A protein GB:U28413 GI:975301 from [Homo sapiens]; confirmed by cDNA gi:1598289 5 2 3 23 At1g30760 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 2 3 24 At1g30820 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I; similar to ESTs gb|AA660762, gb|AA220982, dbj|AU008137, gb|AI054783, and gb|AA100804" 5 2 3 25 At1g31000 F-box family protein contains F-box domain Pfam:PF00646 5 2 4 1 At1g31070 UDP-N-acetylglucosamine pyrophosphorylase-related low similarity to SP|P43123 UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) {Saccharomyces cerevisiae} 5 2 4 2 At1g31250 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; similar to prolin rich protein GB:S44189 GI:433706 from [Zea mays]" 5 2 4 3 At1g31310 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965;" 5 2 4 4 At1g31480 shoot gravitropism 2 (SGR2) Plant Cell 2002 Jan;14:33-46 PMID:11826297; similar to phospholipase [Homo sapiens] GI:4760647; identical to cDNA PF02862: DDHD domain 5 2 4 5 At1g31530 endonuclease/exonuclease/phosphatase family protein contains similarity to nocturnin [Homo sapiens] GI:9885288; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 5 2 4 6 At1g34575 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 2 4 7 At1g34650 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox 1 (GP:12002853) {Picea abies}; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 5 2 4 8 At1g35100 hypothetical protein 5 2 4 9 At1g35180 expressed protein similar to hypothetical protein GB:AAF69173 GI:7767676 from [Arabidopsis thaliana] 5 2 4 10 At1g35400 hypothetical protein 5 2 4 11 At1g35470 SPla/RYanodine receptor (SPRY) domain-containing protein similar to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 5 2 4 12 At1g35630 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326" 5 2 4 13 At1g35680 "50S ribosomal protein L21, chloroplast / CL21 (RPL21) identical to 50S ribosomal protein L21, chloroplast precursor (CL21) [Arabidopsis thaliana] SWISS-PROT:P51412" 5 2 4 14 At1g47320 expressed protein similar to putative non-LTR retroelement reverse transcriptase GB:AAD21515 GI:4510429 from [Arabidopsis thaliana]; expression supported by MPSS 5 2 4 15 At1g47390 F-box family protein contains F-box domain Pfam:PF00646 5 2 4 16 At1g47550 expressed protein 5 2 4 17 At1g47620 "cytochrome P450, putative similar to cytochrome P450 GI:4688670 from [Catharanthus roseus]" 5 2 4 18 At1g47786 acyl-protein thioesterase-related similar to hypothetical protein GB:AAD55623 GI:5903064 from [Arabidopsis thaliana] contains similarity to acyl-protein thioesterase-1 [Homo sapiens] gi|9965372|gb|AAG10063 5 2 4 19 At1g47820 expressed protein identical to hypothetical protein GB:AAF19740 GI:6634732 from [Arabidopsis thaliana] 5 2 4 20 At1g48030 "dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) identical to GB:AAF34795 [gi:12704696] from [Arabidopsis thaliana]" 5 2 4 21 At1g48090 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain 5 2 4 22 At1g51110 plastid-lipid associated protein PAP / fibrillin family protein similar to plastid-lipid associated protein PAP2 [Brassica rapa] GI:14248550; contains Pfam profile PF04755: PAP_fibrillin 5 2 4 23 At1g51170 protein kinase family protein 5 2 4 24 At1g51355 expressed protein 5 2 4 25 At1g51390 nitrogen fixation NifU-like family protein simikar to HIRA-interacting protein 5 (NIFU FAMILY) (SP:Q9QZ23) {Mus musculus}; contains Pfam profile: PF01106 NifU-like domain 5 2 5 1 At1g51540 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 5 2 5 2 At1g51600 zinc finger (GATA type) family protein contains similarity to zinc-finger protein ZIM [Arabidopsis thaliana] gi|8918533|dbj|BAA97679; contains Pfam PF00320: GATA zinc finger 5 2 5 3 At1g51720 "glutamate dehydrogenase, putative similar to NADP-specific glutatamate dehydrogenase (NADP-GDH) SP:P28724 [Giardia lamblia (Giardia intestinalis)]" 5 2 5 4 At1g51780 IAA-amino acid hydrolase 5 / auxin conjugate hydrolase (ILL5) identical to auxin conjugate hydrolase ILL5 [Arabidopsis thaliana] gi|5725649|gb|AAD48152; contains nonconsensus AT acceptor splice site at exon3 5 2 5 5 At1g54390 PHD finger protein-related contains low similarity to PHD-finger domain proteins 5 2 5 6 At1g54450 calcium-binding EF-hand family protein contains Pfam profile: PF00036 EF hand 5 2 5 7 At1g54630 "acyl carrier protein 3, chloroplast (ACP-3) nearly identical to SP|P25702 Acyl carrier protein 3, chloroplast precursor (ACP) {Arabidopsis thaliana}" 5 2 5 8 At1g54710 expressed protein contains 3 WD-40 repeats (PF00400) (1 weak) submitForm(); 5 2 5 9 At1g54850 expressed protein contains similarity to LMW heat shock protein GI:2326354 from (Arabidopsis thaliana) 5 2 5 10 At1g54920 expressed protein 5 2 5 11 At1g55070 F-box family protein contains Pfam profile: PF00646 F-box domain 5 2 5 12 At1g55140 URF 4-related weak similarity to URF 4 (GI:49224) [Synechococcus sp.] 5 2 5 13 At1g59640 basic helix-loop-helix (bHLH) family protein 5 2 5 14 At1g59675 F-box family protein similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 5 2 5 15 At1g59830 serine/threonine protein phosphatase PP2A-2 catalytic subunit (PP2A2) identical to SP|Q07099 Serine/threonine protein phosphatase PP2A-2 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 5 2 5 16 At1g59860 17.6 kDa class I heat shock protein (HSP17.6A-CI) similar to 17.5 kDa class I heat shock protein SP:P04793 from [Glycine max] 5 2 5 17 At1g60000 "29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative similar to 29 kDa ribonucleoprotein chloroplast precursor {Nicotiana sylvestris} SP|Q08935, SP|Q08937; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) contains an AG-donor site at intron." 5 2 5 18 At1g60060 expressed protein 5 2 5 19 At1g60300 apical meristem formation protein-related contains similarity to CUC1 [Arabidopsis thaliana] gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida] gi|1279640|emb|CAA63101 5 2 5 20 At1g60380 apical meristem formation protein-related contains similarity to CUC1 [Arabidopsis thaliana] gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida] gi|1279640|emb|CAA63101 5 2 5 21 At1g63240 expressed protein 5 2 5 22 At1g63270 ABC transporter family protein 5 2 5 23 At1g63450 exostosin family protein contains Pfam profile: PF03016 exostosin family 5 2 5 24 At1g63520 expressed protein 5 2 5 25 At1g63660 "GMP synthase [glutamine-hydrolyzing], putative / glutamine amidotransferase, putative similar to SP|P38625 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase) {Saccharomyces cerevisiae}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 5 2 6 1 At1g63700 "protein kinase, putative contains protein kinase domain, Pfam:PF00069; similar to MEK kinase (MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848" 5 2 6 2 At1g63855 expressed protein 5 2 6 3 At1g63910 myb family transcription factor (MYB103) contains Pfam profile: PF00249 myb-like DNA-binding domain 5 2 6 4 At1g66690 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 5 2 6 5 At1g66760 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 5 2 6 6 At1g66920 "serine/threonine protein kinase, putative similar to receptor serine/threonine kinase PR55K gi|1235680|gb|AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 5 2 6 7 At1g66960 "lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putative similar to lupeol synthase GI:1762150 from [Arabidopsis thaliana], 2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis thaliana] GI:2738027" 5 2 6 8 At1g67120 midasin-related similar to Midasin (MIDAS-containing protein) (Swiss-Prot:Q12019) [Saccharomyces cerevisiae]; similar to Midasin (MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo sapiens]; contains Prosite PS00017: ATP/GTP-binding site motif A (P-loop) 5 2 6 9 At1g67180 "zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein contains Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and PF00097: Zinc finger, C3HC4 type (RING finger)" 5 2 6 10 At1g67350 expressed protein contains similarity to MHC class II antigen GI:9502037 from [Aotus nancymaae] 5 2 6 11 At1g67420 "24 kDa vacuolar protein, putative similar to 24 kDa vacuolar protein VP24 [Ipomoea batatas] gi|5821406|dbj|BAA83809" 5 2 6 12 At1g70070 "DEAD/DEAH box helicase, putative similar to SP|P35207 Antiviral protein SKI2 {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 5 2 6 13 At1g70110 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 5 2 6 14 At1g70280 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 5 2 6 15 At1g70340 expressed protein 5 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 5 2 6 17 At1g70520 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 5 2 6 18 At1g70670 caleosin-related family protein similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 5 2 6 19 At1g70730 "phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative strong similarity to SP|P93804 Phosphoglucomutase, cytoplasmic 1 (EC 5.4.2.2) (Glucose phosphomutase 1) (PGM 1) {Zea mays}; contains InterPro accession IPR006352: Phosphoglucosamine mutase" 5 2 6 20 At1g73580 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 5 2 6 21 At1g73620 "thaumatin-like protein, putative / pathogenesis-related protein, putative strong similarity to SP|P50699 Thaumatin-like protein precursor {Arabidopsis thaliana}, pathogenesis-related group 5 protein [Brassica rapa] GI:2749943; contains Pfam profile: PF00314 thaumatin family" 5 2 6 22 At1g73760 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 5 2 6 23 At1g73810 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 5 2 6 24 At1g73970 expressed protein 5 2 6 25 At1g74030 "enolase, putative similar to Swiss-Prot:P15007 enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate hydro-lyase) [Drosophila melanogaster]" 5 2 7 1 At1g74190 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.1 [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779" 5 2 7 2 At1g74250 "DNAJ heat shock N-terminal domain-containing protein contains Pfam domains PF00226: DnaJ domain and PF00096: Zinc finger, C2H2 type" 5 2 7 3 AT5G57480 PC-1 B08 5 2 7 4 3XSSC PC-1 B20 5 2 7 5 AT1G29930 PC-1 F08 5 2 7 6 3XSSC PC-1 F20 5 2 7 7 AT3G44150 PC-1 J08 5 2 7 8 3XSSC PC-1 J20 5 2 7 9 AT4G00810 PC-1 N08 5 2 7 10 3XSSC PC-1 N20 5 2 7 11 At1g77030 glycine-rich protein 5 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 5 2 7 13 At1g77240 "AMP-binding protein, putative strong similarity to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501" 5 2 7 14 At1g77300 SET domain-containing protein similar to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain 5 2 7 15 At1g77480 "nucellin protein, putative similar to nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare] (nucellin: similar to aspartic protease and its specific expression in nucellar cells during degeneration)" 5 2 7 16 At1g77520 "O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase GB:O23760 [Clarkia breweri], [SP|Q00763] [Populus tremuloides]" 5 2 7 17 At1g77700 pathogenesis-related thaumatin family protein similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family 5 2 7 18 At1g77760 nitrate reductase 1 (NR1) identical to SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1) (NR1){Arabidopsis thaliana} 5 2 7 19 At1g80300 "chloroplast ADP, ATP carrier protein 1 / ADP, ATP translocase 1 / adenine nucleotide translocase 1 (AATP1) identical to SP|Q39002 Chloroplast ADP,ATP carrier protein 1, chloroplast precursor (ADP/ATP translocase 1) (Adenine nucleotide translocase 1) {Arabidopsis thaliana}" 5 2 7 20 At1g80360 aminotransferase class I and II family protein low similarity to GI:14278621 Aromatic Aminotransferase from Pyrococcus horikoshii 5 2 7 21 At1g80510 amino acid transporter family protein similar to amino acid transporter system N2 [Rattus norvegicus] GI:14578932; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 5 2 7 22 At1g80570 F-box family protein (FBL14) contains similarity to F-box protein FBL2 GI:6063090 from [Homo sapiens] 5 2 7 23 At1g80750 60S ribosomal protein L7 (RPL7A) similar to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo sapiens] 5 2 7 24 At1g80810 expressed protein similar to androgen-induced prostate proliferative shutoff associated protein (GI:4559410) [Homo sapiens]; similar to bimD (GI:168025) [Emericella nidulans] 5 2 7 25 At1g80940 expressed protein 5 2 8 1 At2g01031 hypothetical protein 5 2 8 2 At2g04000 expressed protein 5 2 8 3 At2g04041 hypothetical protein 5 2 8 4 At2g04220 hypothetical protein 5 2 8 5 At2g04280 expressed protein 5 2 8 6 At2g04460 expressed protein 5 2 8 7 At2g04530 RNase Z 97% identical to RNase Z (GI:20975607) [Arabidopsis thaliana]; similar to RNase Z (GI:20975609) [Arabidopsis thaliana]; identical to cDNA RNase Z (At2g04530) GI:20975606 5 2 8 8 At2g04740 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 5 2 8 9 At2g04800 expressed protein 5 2 8 10 At2g11623 hypothetical protein 5 2 8 11 At2g11910 expressed protein 5 2 8 12 At2g12505 hypothetical protein 5 2 8 13 At2g12700 hypothetical protein 5 2 8 14 At2g13360 "serine-glyoxylate aminotransferase-related similar to serine-glyoxylate aminotransferase (GI:21535798)[Methylobacterium dichloromethanicum; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V]" 5 2 8 15 At2g13500 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 5 2 8 16 At2g13730 hypothetical protein 5 2 8 17 At2g13820 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 5 2 8 18 At2g17120 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain; supporting cDNA gi|16226688|gb|AF428464.1|AF428464 5 2 8 19 At2g17180 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 2 8 20 At2g17350 expressed protein 5 2 8 21 At2g17420 thioredoxin reductase 2 / NADPH-dependent thioredoxin reductase 2 (NTR2) identical to SP|Q39242 5 2 8 22 At2g17620 "cyclin, putative (CYC2a) similar to cyclin 2b protein [Arabidopsis thaliana] GI:509423; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain; identical to cDNA cyc2a mRNA for cyclin 2a protein GI:728518" 5 2 8 23 At2g17670 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 8 24 At2g17820 histidine kinase 1 99% identical to GP:4586626 5 2 8 25 At2g17870 "cold-shock DNA-binding family protein contains Pfam domains, PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle" 5 2 9 1 At2g20620 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 5 2 9 2 At2g20650 zinc finger (C3HC4-type RING finger) family protein 5 2 9 3 At2g20790 expressed protein weak similarity to clathrin-adaptor medium chain apm 3 (GI:12000359) [Dictyostelium discoideum]; weak similarity to Adapter-related protein complex 3 mu 2 subunit (Clathrin coat assembly protein AP47 homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2) (HA1 47 kDa subunit homolog 2) (P47B) (Swiss-Prot:P53678) [Rattus norvegicus] 5 2 9 4 At2g20820 expressed protein . 5 2 9 5 At2g20950 expressed protein 5 2 9 6 At2g20990 C2 domain-containing protein (sytA) similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 5 2 9 7 At2g21180 expressed protein 5 2 9 8 At2g21220 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana]" 5 2 9 9 At2g24040 "hydrophobic protein, putative / low temperature and salt responsive protein, putative similar to SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana}; contains Pfam profile PF01679: Uncharacterized protein family" 5 2 9 10 At2g24100 expressed protein 5 2 9 11 At2g24285 hypothetical protein 5 2 9 12 At2g24340 hypothetical protein 5 2 9 13 At2g24520 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H(+)-transporting ATPase from [Phaseolus vulgaris] GI:758250, [Lycopersicon esculentum] GI:1621440, SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum tuberosum] GI:435001; contains InterPro accession IPR001757: ATPase, E1-E2 type" 5 2 9 14 At2g24580 "sarcosine oxidase family protein similar to peroxisomal sarcosine oxidase from Homo sapiens [SP|Q9P0Z9], Oryctolagus cuniculus [SP|P79371], Mus musculus [SP|Q9D826]" 5 2 9 15 At2g24762 expressed protein 5 2 9 16 At2g24810 pathogenesis-related thaumatin family protein similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family 5 2 9 17 At2g27505 expressed protein ; expression supported by MPSS 5 2 9 18 At2g27550 "centroradialis protein, putative (CEN) strong similarity to SP|Q41261 CENTRORADIALIS protein {Antirrhinum majus}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein" 5 2 9 19 At2g27730 expressed protein contains 1 transmembrane domain; similar to Unknown mitochondrial protein At2g27730 (Swiss-Prot:Q9ZUX4) [Arabidopsis thaliana] similar to F1F0-ATPase inhibitor protein (GI:5821432) [Oryza sativa] 5 2 9 20 At2g27775 expressed protein 5 2 9 21 At2g27940 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 2 9 22 At2g28000 "RuBisCO subunit binding-protein alpha subunit, chloroplast / 60 kDa chaperonin alpha subunit / CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit, CPN-60 alpha) [Arabidopsis thaliana]" 5 2 9 23 At2g28150 expressed protein 5 2 9 24 At2g28210 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 5 2 9 25 At2g30940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 2 10 1 At2g30985 expressed protein 5 2 10 2 At2g31130 expressed protein 5 2 10 3 At2g31190 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 5 2 10 4 At2g31350 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme [Arabidopsis thaliana] gi|2570338|gb|AAC49865" 5 2 10 5 At2g31380 "zinc finger (B-box type) family protein / salt tolerance-like protein (STH) contains Pfam profile PF00643: B-box zinc finger; identical to cDNA B-box zinc finger protein STH GI:12698721, SP|Q9SID1 Salt tolerance-like protein (Arabidopsis thaliana)" 5 2 10 6 At2g31560 expressed protein 5 2 10 7 At2g31600 expressed protein 5 2 10 8 At2g34220 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 5 2 10 9 At2g34260 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina} 5 2 10 10 At2g34380 expressed protein 5 2 10 11 At2g34420 chlorophyll A-B binding protein / LHCII type I (LHB1B2) identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16364 5 2 10 12 At2g34560 "katanin, putative similar to katanin p60 subunit [Strongylocentrotus purpuratus] GI:3098603; contains Pfam profile PF00004: ATPase AAA family" 5 2 10 13 At2g34610 expressed protein 5 2 10 14 At2g34790 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 2 10 15 At2g34850 "NAD-dependent epimerase/dehydratase family protein similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba GI:3021357, Lactococcus lactis GI:3703056; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 5 2 10 16 At2g37440 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 5 2 10 17 At2g37480 expressed protein 5 2 10 18 At2g37640 "expansin, putative (EXP3) identical to Alpha-expansin 3 precursor (At-EXP3)[Arabidopsis thaliana] SWISS-PROT:O80932; alpha-expansin gene family, PMID:11641069" 5 2 10 19 At2g37700 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]; may be involved in wax biosynthesis; contains a SUR2-type hydroxylase/desaturase catalytic domain (PS50242)" 5 2 10 20 At2g37840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 2 10 21 At2g37910 "cation/hydrogen exchanger, putative (CHX21) and similar to hypothetical proteins; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 5 2 10 22 At2g38060 "transporter-related low similarity to vesicular glutamate transporter 3 [Homo sapiens] GI:21213895, brain specific Na+-dependent inorganic phosphate cotransporter [Rattus norvegicus] GI:507415; contains Pfam profile PF00083: major facilitator superfamily protein" 5 2 10 23 At2g38120 "amino acid permease, putative (AUX1) identical to AUX1 GI:1531758 from [Arabidopsis thaliana]" 5 2 10 24 At2g40660 tRNA-binding region domain-containing protein similar to SP|Q12904 Multisynthetase complex auxiliary component p43 [Contains: Endothelial-monocyte activating polypeptide II (EMAP-II) (Small inducible cytokine subfamily E member 1)] {Homo sapiens}; contains Pfam profile PF01588: Putative tRNA binding domain 5 2 10 25 At2g40720 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 5 2 11 1 At2g40860 protein kinase family protein / protein phosphatase 2C ( PP2C) family protein contains Pfam PF00481: Protein phosphatase 2C domain; contains Pfam PF00069: Protein kinase domain; similar to partner of PIX 1 (GI:21702695) [Homo sapiens] 5 2 11 2 At2g40910 "F-box protein-related similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 5 2 11 3 At2g41040 methyltransferase-related eak similarity to C5-O-methyltransferase (GI:5921167) [Streptomyces avermitilis]; weak similarity to Probable menaquinone biosynthesis methyltransferase (EC 2.1.1.-) (gerC2 protein homolog) (Swiss-Prot:P49016) [Lactococcus lactis] 5 2 11 4 At2g41100 "touch-responsive protein / calmodulin-related protein 3, touch-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana]" 5 2 11 5 At2g41240 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 2 11 6 At2g41310 two-component responsive regulator / response reactor 3 (RR3) identical to response reactor 3 GI:3273200 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 5 2 11 7 At2g43920 "thiol methyltransferase, putative similar to thiol methyltransferase 1 GI:14583119 from [Brassica oleracea]" 5 2 11 8 At2g43950 expressed protein 5 2 11 9 At2g44065 "ribosomal protein L2 family protein similar to ribosomal protein L2 [Gossypium arboreum] GI:17644114; contains Pfam profile PF03947: Ribosomal Proteins L2, C-terminal domain" 5 2 11 10 At2g44120 60S ribosomal protein L7 (RPL7C) 5 2 11 11 At2g44270 expressed protein contains Pfam profile PF01171: PP-loop family 5 2 11 12 At2g44340 VQ motif-containing protein contains PF05678: VQ motif 5 2 11 13 At2g44500 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'axi 1 protein from Nicotiana tabacum -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 5 2 11 14 At2g44550 glycosyl hydrolase family 9 protein 5 2 11 15 At2g47220 "3' exoribonuclease family domain 1 protein-related similar to polynucleotide phosphorylase [Pisum sativum] GI:2286200, polyribonucleotide phophorylase [Spinacia oleracea] GI:1924972; contains Pfam profiles PF05266: Protein of unknown function (DUF724), weak hit to PF01138: 3' exoribonuclease family, domain 1" 5 2 11 16 At2g47280 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 5 2 11 17 At2g47450 chloroplast signal recognition particle component (CAO) nearly identical to CAO [Arabidopsis thaliana] GI:4102582 5 2 11 18 At2g47485 expressed protein 5 2 11 19 At2g47640 "small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative similar to small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2) [Mus musculus] SWISS-PROT:P43330" 5 2 11 20 At2g47700 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type(RING finger)" 5 2 11 21 At2g47870 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 5 2 11 22 At2g47910 expressed protein 5 2 11 23 At3g03230 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 5 2 11 24 At3g03270 universal stress protein (USP) family protein / early nodulin ENOD18 family protein contains Pfam profile PF00582: universal stress protein family; similar to early nodulin ENOD18 (GI:11602747) [Vicia faba] 5 2 11 25 At3g03440 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 5 2 12 1 At3g03500 tatD-related deoxyribonuclease family protein weak similarity to SP|P27859 Deoxyribonuclease tatD (EC 3.1.21.-) (DNAse tatD) {Escherichia coli}; contains Pfam profile PF01026: TatD related DNase 5 2 12 2 At3g03680 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 5 2 12 3 At3g03740 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 5 2 12 4 At3g03880 expressed protein 5 2 12 5 At3g03920 Gar1 RNA-binding region family protein contains Pfam profile PF04410: Gar1 protein RNA binding region 5 2 12 6 At3g06440 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 5 2 12 7 At3g06483 pyruvate dehydrogenase (lipoamide) kinase (PDHK) nearly identical to pyruvate dehydrogenase kinase [Arabidopsis thaliana] GI:3641834 5 2 12 8 At3g06620 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 5 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 5 2 12 10 At3g06770 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase [Persea americana] GI:166951; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 5 2 12 11 At3g06840 expressed protein 5 2 12 12 At3g07000 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 2 12 13 At3g07050 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 5 2 12 14 At3g10090 40S ribosomal protein S28 (RPS28A) similar to ribosomal protein S28 GB:P34789 [Arabidopsis thaliana] 5 2 12 15 At3g10130 SOUL heme-binding family protein weak similarity to heme-binding protein [Homo sapiens] GI:4886908; contains Pfam profile PF04832: SOUL heme-binding protein 5 2 12 16 At3g10290 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 5 2 12 17 At3g10330 transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2) identical to SP|Q9SS44 Transcription initiation factor IIB-2 (General transcription factor TFIIB-2) (AtTFIIB2) {Arabidopsis thaliana} 5 2 12 18 At3g10480 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein; N-terminus similar to unknown protein GB:AAD25613 [Arabidopsis thaliana] 5 2 12 19 At3g10520 non-symbiotic hemoglobin 2 (HB2) (GLB2) identical to SP|O24521 Non-symbiotic hemoglobin 2 (Hb2) (ARAth GLB2) {Arabidopsis thaliana} 5 2 12 20 At3g10640 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 5 2 12 21 At3g10700 GHMP kinase family protein contains Pfam profile: PF00288 GHMP kinases putative ATP-binding proteins 5 2 12 22 At3g13130 hypothetical protein 5 2 12 23 At3g13180 "NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein low similarity to SP|P36929 SUN protein (FMU protein) {Escherichia coli}; contains Pfam profiles PF01189: NOL1/NOP2/sun family, PF01029: NusB family" 5 2 12 24 At3g13270 hypothetical protein contains similarity to replication protein A1 5 2 12 25 At3g13320 calcium exchanger (CAX2) almost identical to low affinity calcium antiporter CAX2 (GI:1488267) [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563 5 2 13 1 At3g13480 expressed protein ; expression supported by MPSS 5 2 13 2 At3g13540 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 2 13 3 At3g13672 seven in absentia (SINA) family protein low similarity to SP|P21461 Developmental protein seven in absentia {Drosophila melanogaster}; contains Pfam profile PF03145: Seven in absentia protein family 5 2 13 4 At3g13690 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 2 13 5 At3g16170 "acyl-activating enzyme 13 (AAE13) similar to malonyl CoA synthetase GB:AAF28840 from [Bradyrhizobium japonicum]; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA acyl-activating enzyme 13 (At3g16170) GI:29893232, acyl-activating enzyme 13 [Arabidopsis thaliana] GI:29893233" 5 2 13 6 At3g16220 expressed protein similar to CGI-18 protein GB:AAD27727 [Homo sapiens] 5 2 13 7 At3g16400 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, epithiospecifier [Arabidopsis thaliana] GI:16118845; contains Pfam profiles PF01419 jacalin-like lectin family, PF01344 Kelch motif" 5 2 13 8 At3g16460 "jacalin lectin family protein contains Pfam profile: PF01419 jacalin-like lectin domain; similar to myrosinase binding protein [Brassica napus] GI:1711296, GI:1655824, myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin family" 5 2 13 9 At3g16590 F-box family protein contains F-box domain Pfam:PF00646 5 2 13 10 At3g16650 "PP1/PP2A phosphatases pleiotropic regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A phosphatases pleiotropic regulator PRL2 {Arabidopsis thaliana}, GB:Q39190 from [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (7 copies, 1 weak)" 5 2 13 11 At3g16810 pumilio/Puf RNA-binding domain-containing protein contains Pfam profile:PF00806 Pumilio-family RNA binding domains 5 2 13 12 At3g16857 "two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain; similar to ARR1 protein GB:BAA74528 from [Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39 (11), 1232-1239)" 5 2 13 13 At3g19500 ethylene-responsive protein -related contains similarity to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413 5 2 13 14 At3g19540 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 5 2 13 15 At3g19690 "pathogenesis-related protein, putative similar to PR-1a protein GI:19944 GB:X06930 from [Nicotiana tabacum]; contains Pfam profile PF00188: SCP-like extracellular protein" 5 2 13 16 At3g19750 hypothetical protein 5 2 13 17 At3g19920 expressed protein 5 2 13 18 At3g19980 serine/threonine protein phosphatase (STPP) identical to serine/threonine protein phosphatase [Arabidopsis thaliana] GI:14582206; very similar to serine/threonine protein phosphatase GB:Z47076 GI:1143510 [Malus domestica]; contains Pfam profile PF00149: Ser/Thr protein phosphatase 5 2 13 19 At3g20120 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 5 2 13 20 At3g20170 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 5 2 13 21 At3g22890 sulfate adenylyltransferase 1 / ATP-sulfurylase 1 (APS1) nearly identical to ATP sulfurylase (APS1) [Arabidopsis thaliana] GI:6606509 5 2 13 22 At3g22942 heterotrimeric G protein protein gamma subunit (AGG2) described in Biochim Biophys Acta. 2001 Aug 30;1520(2):147-53. 5 2 13 23 At3g23100 "double strand break repair protein, putative (XRCC4) identical to cDNA putative double strand break repair protein (XRCC4) GI:9800642" 5 2 13 24 At3g23160 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668); expression supported by MPSS 5 2 13 25 At3g23295 expressed protein 5 2 14 1 At3g23340 "casein kinase, putative similar to casein kinase I [Arabidopsis thaliana] gi|1197461|emb|CAA55396" 5 2 14 2 At3g23550 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 5 2 14 3 At3g23605 UBX domain-containing protein contains Pfam profile PF00789: UBX domain 5 2 14 4 At3g26440 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 5 2 14 5 At3g26490 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 5 2 14 6 At3g26630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 5 2 14 7 At3g26670 expressed protein 5 2 14 8 At3g26800 expressed protein 5 2 14 9 At3g26850 expressed protein 5 2 14 10 At3g26990 "expressed protein contains Pfam domain, PF04818: Protein of unknown function, DUF618" 5 2 14 11 At3g27040 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 2 14 12 At3g29830 F-box family protein contains Pfam:PF00646 F-box domain 5 2 14 13 At3g30200 "fructose-6-phosphate 2-kinase-related / fructose-2,6-bisphosphatase-related similar to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase [Arabidopsis thaliana] GI:13096098" 5 2 14 14 At3g30420 "hypothetical protein low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 5 2 14 15 At3g30480 hypothetical protein 5 2 14 16 At3g30690 hypothetical protein 5 2 14 17 At3g30751 hypothetical protein 5 2 14 18 At3g31330 hypothetical protein 5 2 14 19 At3g31415 terpene synthase/cyclase family protein similar to vetispiradiene synthase [Solanum tuberosum][GI:5360653] 5 2 14 20 At3g44713 hypothetical protein 5 2 14 21 At3g44750 "histone deacetylase, putative (HD2A) contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA putative histone deacetylase (HD2A) GI:11066134" 5 2 14 22 At3g44900 "cation/hydrogen exchanger, putative (CHX4) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 5 2 14 23 At3g44950 glycine-rich protein 5 2 14 24 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 5 2 14 25 At3g45160 expressed protein 5 2 15 1 At3g45370 hypothetical protein 5 2 15 2 At3g45430 lectin protein kinase family protein contains Pfam domains PF00138: Legume lectins alpha domain and PF00069: Protein kinase domain 5 2 15 3 At3g48240 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 5 2 15 4 At3g48300 cytochrome P450 family protein strong similarity to (SP:Q9STL0) [Arabidopsis thaliana]; 5 2 15 5 At3g48470 expressed protein 5 2 15 6 At3g48530 "CBS domain-containing protein low similarity to SP|Q9UGI9 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Homo sapiens}; contains Pfam profile PF00571: CBS domain" 5 2 15 7 At3g48710 "expressed protein putative protein - Arabidopsis thaliana, EMBL:AL078465.1" 5 2 15 8 At3g48770 hypothetical protein 5 2 15 9 At3g48930 40S ribosomal protein S11 (RPS11A) 5 2 15 10 At3g48990 AMP-dependent synthetase and ligase family protein similar to peroxisomal-coenzyme A synthetase (FAT2) [gi:586339] from Saccharomyces cerevisiae; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA; identical to cDNA adenosine monophosphate binding protein 3 AMPBP3 (AMPBP3)GI:20799714 5 2 15 11 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 5 2 15 12 At3g51880 high mobility group protein alpha (HMGalpha) / HMG protein alpha nearly identical to HMG protein (HMGalpha) [Arabidopsis thaliana] GI:2832357; contains Pfam profile PF00505: HMG (high mobility group) box 5 2 15 13 At3g52040 expressed protein 5 2 15 14 At3g52070 expressed protein 5 2 15 15 At3g52210 "mRNA capping enzyme family protein contains Pfam profile PF03291: mRNA capping enzyme, large subunit" 5 2 15 16 At3g52260 pseudouridine synthase family protein similar to SP|P39219 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 5 2 15 17 At3g52420 "outer envelope membrane protein, putative similar to outer envelope membrane protein gi|703236|gb|AAA63414" 5 2 15 18 At3g52480 expressed protein 5 2 15 19 At3g55000 tonneau family protein similar to tonneau 1b (GI:11494367) [Arabidopsis thaliana] 5 2 15 20 At3g55040 "In2-1 protein, putative similar to In2-1 protein, Zea mays, P49248" 5 2 15 21 At3g55200 "splicing factor, putative contains CPSF A subunit region (PF03178); contains weak WD-40 repeat (PF00400); similar to Splicing factor 3B subunit 3 (SF3b130)/spliceosomal protein/Splicing factor 3B subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens, EMBL:HSAJ1443_1" 5 2 15 22 At3g55260 glycosyl hydrolase family 20 protein similar to beta-hexosaminidase A SP:P13723 from [Dictyostelium discoideum] 5 2 15 23 At3g55440 "triosephosphate isomerase, cytosolic, putative strong similarity to triosephosphate isomerase, cytosolic from Petunia hybrida [SP|P48495], from Coptis japonica [SP|P21820]" 5 2 15 24 At3g55510 expressed protein 5 2 15 25 At3g55680 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 5 2 16 1 At3g55740 proline transporter 2 (ProT2) identical to proline transporter 2 GI:1769903 from [Arabidopsis thaliana] 5 2 16 2 At3g58590 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 16 3 At3g58650 expressed protein 5 2 16 4 At3g58820 F-box family protein contains F-box domain Pfam:PF00646 5 2 16 5 At3g58880 F-box family protein contains F-box domain Pfam:PF00646 5 2 16 6 At3g59050 "amine oxidase family protein similar to polyamine oxidase (EC 1.5.3.11) precursor - Zea mays [SP|O64411]; contains Pfam profile PF01593 amine oxidase, flavin-containing" 5 2 16 7 At3g59090 expressed protein 5 2 16 8 At3g59270 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At1g56610, At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g44180, At1g48390, At3g59270 [Arabidopsis thaliana]" 5 2 16 9 At3g59320 "integral membrane protein, putative contains Pfam profile PF00892: Integral membrane protein; identical to anthocyanin-related membrane protein 2 (GI:16416385) [Arabidopsis thaliana]" 5 2 16 10 At3g61980 "serine protease inhibitor, Kazal-type family protein contains Pfam domain PF00050: Kazal-type serine protease inhibitor domain" 5 2 16 11 At3g62020 germin-like protein (GLP10) identical to germin-like protein subfamily 2 member 4 [SP|Q9M263] 5 2 16 12 At3g62200 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 5 2 16 13 At3g62260 "protein phosphatase 2C, putative / PP2C, putative phosphoprotein phosphatase (EC 3.1.3.16) 1A-alpha - Homo sapiens, PIR:S22423" 5 2 16 14 At3g62420 bZIP transcription factor family protein similar to common plant regulatory factor 6 GI:9650826 from [Petroselinum crispum] 5 2 16 15 At3g62480 hypothetical protein 5 2 16 16 At3g62650 "expressed protein putative mitochondrial carrier protein At2g47490 - Arabidopsis thaliana, EMBL:AC002535" 5 2 16 17 At3g62710 "glycosyl hydrolase family 3 protein exhydrolase II - Zea mays, EMBL:AF064707" 5 2 16 18 At4g01590 expressed protein 5 2 16 19 At4g01630 "expansin, putative (EXP17) similar to alpha-expansin precursor GI:4027891 from [Nicotiana tabacum]; alpha-expansin gene family, PMID:11641069" 5 2 16 20 At4g01780 "XH/XS domain-containing protein contains Pfam profiles PF03469: XH domain, PF03468: XS domain" 5 2 16 21 At4g01840 "outward rectifying potassium channel, putative (KCO5) identical to KCO5 protein [Arabidopsis thaliana] gi|6522947|emb|CAB62162; similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 5 2 16 22 At4g01960 expressed protein 5 2 16 23 At4g02000 expressed protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 5 2 16 24 At4g02160 hypothetical protein 5 2 16 25 At4g02200 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 5 2 17 1 At4g05140 equilibrative nucleoside transporter family protein contains similarity to SWISS-PROT:P31381 nucleoside transporter FUN26 [Saccharomyces cerevisiae] 5 2 17 2 At4g05190 "kinesin-like protein A, putative kinesin like protein A, Arabidopsis thaliana, gb:Q07970" 5 2 17 3 At4g05360 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 5 2 17 4 At4g05420 "UV-damaged DNA-binding protein, putative similar to UV-damaged DNA binding protein (GI:12082087) [Oryza sativa]; contains Pfam PF03178 : CPSF A subunit region" 5 2 17 5 At4g05616 hypothetical protein 5 2 17 6 At4g05636 hypothetical protein 5 2 17 7 At4g07031 cytochrome P-450 aromatase-related similar to minor outer capsid protein VP4 (GI:13446784) [Human rotavirus C]; similar to cytochrome P-450 aromatase (GI:21170) [Gallus gallus]; 5 2 17 8 At4g07400 F-box family protein (FBL8) (FBL24) contains similarity to SKP1 interacting partner 2 GI:10716949 from [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain 5 2 17 9 At4g10550 subtilase family protein contains similarity to subtilisin-like protease AIR3 GI:4218991 from [Arabidopsis thaliana] 5 2 17 10 At4g10600 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 5 2 17 11 At4g10780 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 5 2 17 12 At4g10840 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515 TPR Domain 5 2 17 13 At4g10955 lipase class 3 family protein contains Pfam profile PF01764: Lipase 5 2 17 14 At4g11020 expressed protein 5 2 17 15 At4g11175 "translation initiation factor IF-1, chloroplast, putative similar to Swiss-Prot:P08698 translation initiation factor IF-1, chloroplast [Spinacia oleracea]; contains Pfam profile PF00575: S1 RNA binding domain" 5 2 17 16 At4g11220 reticulon family protein (RTNLB2) similar to SP|Q64548 Reticulon 1 (Neuroendocrine-specific protein) {Rattus norvegicus}; contains Pfam profile PF02453: Reticulon 5 2 17 17 At4g13965 F-box family protein contains F-box domain Pfam:PF00646 5 2 17 18 At4g14010 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 5 2 17 19 At4g14160 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 5 2 17 20 At4g14190 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 17 21 At4g14320 60S ribosomal protein L36a/L44 (RPL36aB) 5 2 17 22 At4g14365 "zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) and Pfam profile: PF00023 ankyrin repeat" 5 2 17 23 At4g14490 "forkhead-associated domain-containing protein / FHA domain-containing protein contains Pfam domain, PF00498: forkhead-associated (FHA) domain" 5 2 17 24 At4g14530 hypothetical protein 5 2 17 25 At4g16900 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 2 18 1 At4g16950 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein.; closest homolog in Col-0 to RPP5 of clutivar Landsberg erecta." 5 2 18 2 At4g17110 expressed protein ; expression supported by MPSS 5 2 18 3 At4g17170 Rab2-like GTP-binding protein (RAB2) identical to Rab2-like protein (At-RAB2) GI:1765896 from [Arabidopsis thaliana] 5 2 18 4 At4g17330 agenet domain-containing protein contains Pfam PF05641: Agenet domain 5 2 18 5 At4g17390 60S ribosomal protein L15 (RPL15B) 5 2 18 6 At4g17560 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 5 2 18 7 At4g17600 lil3 protein identical to Lil3 protein [Arabidopsis thaliana] gi|4741966|gb|AAD28780 5 2 18 8 At4g20170 expressed protein 5 2 18 9 At4g20240 "cytochrome P450, putative similar to |C71R_ARATH Cytochrome P450 71A27 (SP:O65438) [Arabidopsis thaliana]" 5 2 18 10 At4g20400 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 5 2 18 11 At4g20440 "small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|Q05856 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Drosophila melanogaster}" 5 2 18 12 At4g20740 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 18 13 At4g20810 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein contains Pfam profile: PF02002 TFIIE alpha subunit 5 2 18 14 At4g20990 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 5 2 18 15 At4g21050 "Dof-type zinc finger domain-containing protein PBF protein, Triticum aestivum, EMBL:AJ012284" 5 2 18 16 At4g23620 50S ribosomal protein-related contains weak similarity to 50S ribosomal protein L25 (TL5). (Swiss-Prot:P56930) [Thermus thermophilus] 5 2 18 17 At4g23670 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 5 2 18 18 At4g23850 long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase nearly identical to acyl-CoA synthetase (MF7P) from Brassica napus [gi:1617270] 5 2 18 19 At4g23890 "expressed protein hypothetical protein, Synechocystis sp., PIR:S76577" 5 2 18 20 At4g24030 hypothetical protein 5 2 18 21 At4g24090 expressed protein 5 2 18 22 At4g24250 "seven transmembrane MLO family protein / MLO-like protein 13 (MLO13) identical to membrane protein Mlo13 [Arabidopsis thaliana] gi|14091596|gb|AAK53806; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 5 2 18 23 At4g24275 expressed protein 5 2 18 24 At4g26850 expressed protein 5 2 18 25 At4g26910 "2-oxoacid dehydrogenase family protein similar to SP|P36957 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) {Homo sapiens}; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme" 5 2 19 1 At4g27050 F-box family protein contains F-box domain Pfam:PF00646 5 2 19 2 At4g27110 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region 5 2 19 3 At4g27290 "S-locus protein kinase, putative similar to S-receptor kinase gi|392557|gb|AAA62232; contains Pfam domains PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding)" 5 2 19 4 At4g27350 expressed protein 5 2 19 5 At4g27510 expressed protein ; expression supported by MPSS 5 2 19 6 At4g27570 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 5 2 19 7 At4g30140 "GDSL-motif lipase/hydrolase family protein low similarity to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 5 2 19 8 At4g30200 "expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1|" 5 2 19 9 At4g30340 "diacylglycerol kinase family protein contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 5 2 19 10 At4g30400 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHX1a [Arabidopsis thaliana] GI:3790591; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 5 2 19 11 At4g30530 "defense-related protein, putative strong similarity to defense-related protein [Brassica carinata] GI:14009290; contains Pfam profile PF00117: glutamine amidotransferase class-I" 5 2 19 12 At4g30590 plastocyanin-like domain-containing protein 5 2 19 13 At4g30760 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 5 2 19 14 At4g30800 "40S ribosomal protein S11 (RPS11B) ribosomal protein S11, Arabidopsis thaliana,PIR2:C35542" 5 2 19 15 At4g33290 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 5 2 19 16 At4g33355 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 5 2 19 17 At4g33520 "metal-transporting P-type ATPase, putative (PAA1) nearly identical to gi:2668492; contains Pfam heavy-metal-associated domain PF00403" 5 2 19 18 At4g33560 expressed protein 5 2 19 19 At4g33710 "pathogenesis-related protein, putative similar to PR-1a protein [Nicotiana tabacum] GI:19944; contains Pfam profile PF00188: SCP-like extracellular protein" 5 2 19 20 At4g33770 "inositol 1,3,4-trisphosphate 5/6-kinase family protein contains Pfam doamin PF05770 Inositol 1, 3, 4-trisphosphate 5/6-kinase; contains weak similarity to inositol phosphate kinase (GI:27549256) [Zea mays]" 5 2 19 21 At4g33920 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 5 2 19 22 At4g33960 expressed protein 5 2 19 23 AT5G57480 PC-1 B08 5 2 19 24 3XSSC PC-1 B20 5 2 19 25 AT1G29930 PC-1 F08 5 2 20 1 3XSSC PC-1 F20 5 2 20 2 AT3G44150 PC-1 J08 5 2 20 3 3XSSC PC-1 J20 5 2 20 4 AT4G00810 PC-1 N08 5 2 20 5 3XSSC PC-1 N20 5 2 20 6 At4g36530 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Sphingomonas sp.] GI:3426124; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 2 20 7 At4g36560 hypothetical protein 5 2 20 8 At4g36710 scarecrow transcription factor family protein 5 2 20 9 At4g36760 aminopeptidase P similar to Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 5 2 20 10 At4g36910 CBS domain-containing protein contains Pfam profile PF00571: CBS domain 5 2 20 11 At4g36970 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 5 2 20 12 At4g37150 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 2 20 13 At4g37200 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin; identical to cDNA thioredoxin-like protein (hcf164 gene) GI;12049652 5 2 20 14 At4g39795 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 5 2 20 15 At4g39850 peroxisomal ABC transporter (PXA1) identical to peroxisomal ABC transporter PXA1 GI:15320529 from [Arabidopsis thaliana]; contains Pfam profile PF00005: ABC transporter; 5 2 20 16 At4g40000 NOL1/NOP2/sun family protein contains Pfam profile PF01189: NOL1/NOP2/sun family 5 2 20 17 At4g40045 expressed protein 5 2 20 18 At5g01080 "hypothetical protein predicted protein, Arabidopsis thaliana" 5 2 20 19 At5g01140 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 5 2 20 20 At5g01270 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 5 2 20 21 At5g01330 "pyruvate decarboxylase, putative strong similarity to pyruvate decarboxylase 1 [Vitis vinifera] GI:10732644; contains InterPro entry IPR000399: Pyruvate decarboxylase" 5 2 20 22 At5g04040 patatin-related contains Patatin domain PF01734 5 2 20 23 At5g04090 expressed protein 5 2 20 24 At5g04260 thioredoxin family protein low similarity to SP|P29429 Thioredoxin. [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile: PF00085 Thioredoxin 5 2 20 25 At5g04330 "cytochrome P450, putative / ferulate-5-hydroxylase, putative Similar to Cytochrome P450 84A1 Ferulate-5-hydroxylase)(SP:Q42600)[Arabidopsis thaliana];" 5 2 21 1 At5g04500 "glycosyltransferase family protein 47 low similarity to Exostosin-like 2, Homo sapiens [SP|Q9UBQ6], EXTL2, Mus musculus [GI:10443633]" 5 2 21 2 At5g04560 DEMETER protein (DME) identical to DEMETER protein [Arabidopsis thaliana] GI:21743571; contains Pfam profile PF00730: HhH-GPD superfamily base excision DNA repair protein 5 2 21 3 At5g04750 "F1F0-ATPase inhibitor protein, putative similar to F1F0-ATPase inhibitor protein [Oryza sativa (japonica cultivar-group)] gi|5106371|dbj|BAA81661" 5 2 21 4 At5g04800 "40S ribosomal protein S17 (RPS17D) 40S ribosomal protein S17, Lycopersicon esculentum, EMBL:AF161704" 5 2 21 5 At5g07330 expressed protein 5 2 21 6 At5g07380 hypothetical protein 5 2 21 7 At5g07550 glycine-rich protein (GRP19) oleosin; glycine-rich protein 19 (GRP19) PMID:11431566 5 2 21 8 At5g07610 F-box family protein similar to unknown protein (emb|CAB85517.1) 5 2 21 9 At5g07800 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase 2 (FMO2) from Homo sapiens [GI:1834493]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like 5 2 21 10 At5g07860 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 5 2 21 11 At5g08040 expressed protein 5 2 21 12 At5g08100 L-asparaginase / L-asparagine amidohydrolase identical to Swiss-Prot:P50287 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) [Arabidopsis thaliana] 5 2 21 13 At5g11120 hypothetical protein 5 2 21 14 At5g11170 "DEAD/DEAH box helicase, putative (RH15) DEAD BOX RNA helicase RH15, Arabidopsis thaliana, EMBL:ATH010466" 5 2 21 15 At5g11330 "monooxygenase family protein low similarity to 2,6-dihydroxypyridine 3-hydroxylase (DHPH) [GI:14495302] [Arthrobacter nicotinovorans]; contains Pfam profile PF01360: Monooxygenase" 5 2 21 16 At5g11390 expressed protein 5 2 21 17 At5g11570 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 5 2 21 18 At5g11610 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 5 2 21 19 At5g11790 Ndr family protein similar to SP|O23969 Pollen specific protein SF21 {Helianthus annuus}; contains Pfam profile PF03096: Ndr family 5 2 21 20 At5g11850 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain; identical to cDNA MAP3K delta-1 protein kinase GI:2253009" 5 2 21 21 At5g14990 hypothetical protein 5 2 21 22 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 5 2 21 23 At5g15210 "zinc finger homeobox family protein / ZF-HD homeobox family protein various predicted proteins, Arabidopsis thaliana" 5 2 21 24 At5g15270 "KH domain-containing protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 5 2 21 25 At5g15450 "heat shock protein 100, putative / HSP100, putative / heat shock protein clpB, putative / HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530 [Phaseolus lunatus]" 5 2 22 1 At5g15490 "UDP-glucose 6-dehydrogenase, putative very strong similarity to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain" 5 2 22 2 At5g15640 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 5 2 22 3 At5g15700 DNA-directed RNA polymerase (RPOT2) identical to phage-type RNA polymerase rpoT2 [Arabidopsis thaliana] GI:11340683 5 2 22 4 At5g18340 U-box domain-containing protein weak similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 5 2 22 5 At5g18400 expressed protein contains Pfam profile PF05093: Protein of unknown function (DUF689) 5 2 22 6 At5g18530 beige/BEACH domain-containing protein contains 5 WD-40 repeats (PF00400); contains Beige/BEACH domain (Pfam PF02138); FACTOR ASSOCIATED WITH N-SMASE ACTIVATION (FAN) (SP:Q92636) Homo sapiens;similar to Lipopolysaccharide-responsive and beige-like anchor protein (CDC4-like protein) (Beige-like protein) (SP:P50851) [Homo sapiens} 5 2 22 7 At5g18590 kelch repeat-containing protein identical to RanGAP1 interacting protein (GI:21950739) [Arabidopsis thaliana]; similar to Tip elongation aberrant protein 1 (Cell polarity protein tea1) (SP:P87061) [Schizosaccharomyces pombe]; contains Pfam PF01344: Kelch motif (5 repeats) 5 2 22 8 At5g18720 hypothetical protein predicted proteins - Arabidopsis thaliana 5 2 22 9 At5g18780 F-box family protein contains F-box domain Pfam:PF00646 5 2 22 10 At5g18930 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase 5 2 22 11 At5g18970 AWPM-19-like membrane family protein contains Pfam profile: PF05512 AWPM-19-like family 5 2 22 12 At5g22300 nitrilase 4 (NIT4) identical to SP|P46011 Nitrilase 4 (EC 3.5.5.1) {Arabidopsis thaliana} 5 2 22 13 At5g22355 DC1 domain-containing protein contains Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis thaliana] GI:17225050 5 2 22 14 At5g22530 expressed protein 5 2 22 15 At5g22560 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 5 2 22 16 At5g22720 F-box family protein contains F-box domain Pfam:PF00646 5 2 22 17 At5g22770 "adaptin family protein similar to SP|P18484 adaptor-related protein complex 2 alpha 2 subunit (Alpha-adaptin C) (Clathrin assembly protein complex 2 alpha-C large chain) {Rattus norvegicus}; contains Pfam profiles PF01602 Adaptin N terminal region, PF02883 Adaptin C-terminal domain" 5 2 22 18 At5g22930 hypothetical protein 5 2 22 19 At5g22990 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 2 22 20 At5g25570 expressed protein 5 2 22 21 At5g25630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 22 22 At5g25870 hypothetical protein 5 2 22 23 At5g25930 leucine-rich repeat family protein / protein kinase family protein contains similarity to Swiss-Prot:P47735 receptor-like protein kinase 5 precursor [Arabidopsis thaliana]; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 5 2 22 24 At5g26080 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 5 2 22 25 At5g26140 lysine decarboxylase family protein contains Pfam profile PF03641: decarboxylase family protein 5 2 23 1 At5g26300 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 2 23 2 At5g26360 "chaperonin, putative similar to SWISS-PROT:P50143- T-complex protein 1, gamma subunit (TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 5 2 23 3 At5g32482 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 5 2 23 4 At5g32620 hypothetical protein contains similarity to hypothetical proteins 5 2 23 5 At5g33380 hypothetical protein 5 2 23 6 At5g33806 hypothetical protein 5 2 23 7 At5g34885 expressed protein 5 2 23 8 At5g34930 arogenate dehydrogenase identical to arogenate dehydrogenase GI:16903098 from [Arabidopsis thaliana]; contains Pfam profile: PF02153: prephenate dehydrogenase 5 2 23 9 At5g35170 adenylate kinase family protein contains Pfam profile: PF00406 adenylate kinase 5 2 23 10 At5g35210 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease 5 2 23 11 At5g38380 expressed protein 5 2 23 12 At5g38410 "ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) identical to SP|P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) {Arabidopsis thaliana}" 5 2 23 13 At5g38580 hypothetical protein 5 2 23 14 At5g38630 "cytochrome B561 family protein contains Pfam domain, PF03188: Cytochrome b561" 5 2 23 15 At5g38810 "F-box family protein predicted proteins, Arabidopsis thaliana" 5 2 23 16 At5g38880 expressed protein 5 2 23 17 At5g39030 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 2 23 18 At5g39110 "germin-like protein, putative nearly identical to SP|Q9FID0 Germin-like protein subfamily 1 member 14 precursor [Arabidopsis thaliana]" 5 2 23 19 At5g41950 expressed protein 5 2 23 20 At5g42010 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 5 2 23 21 At5g42150 expressed protein 5 2 23 22 At5g42210 expressed protein 5 2 23 23 At5g42370 expressed protein 5 2 23 24 At5g42430 F-box family protein contains Pfam profile: PF00646 F-box domain 5 2 23 25 At5g42620 expressed protein 5 2 24 1 At5g42660 expressed protein contains Pfam profile PF04765: Protein of unknown function (DUF616) 5 2 24 2 At5g45230 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 2 24 3 At5g45280 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 5 2 24 4 At5g45400 "replication protein, putative similar to replication protein A 70kDa [Oryza sativa (japonica cultivar-group)] GI:13536993; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain, PF04057: Replication factor-A protein 1, N-terminal domain" 5 2 24 5 At5g45460 expressed protein 5 2 24 6 At5g45620 "26S proteasome regulatory subunit, putative (RPN9) contains similarity to 26S proteasome subunit p40.5 GI:3618343 from [Homo sapiens]" 5 2 24 7 At5g45660 expressed protein 5 2 24 8 At5g45800 "leucine-rich repeat transmembrane protein kinase, putative " 5 2 24 9 At5g45860 Bet v I allergen family protein low similarity to SP|P27538 Pathogenesis-related protein 2 {Petroselinum crispum} 5 2 24 10 At5g48450 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase; also similar to l-ascorbate oxidase and pollen-specific protein 5 2 24 11 At5g48500 expressed protein similar to unknown protein (gb|AAD28645.1) 5 2 24 12 At5g48655 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 2 24 13 At5g48670 MADS-box family protein contains similarity to MADS-box DNA-binding protein 5 2 24 14 At5g48850 male sterility MS5 family protein similar to male sterility MS5 [Arabidopsis thaliana] GI:3859112; contains Pfam profile PF00515 TPR Domain 5 2 24 15 At5g48910 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 24 16 At5g49060 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 5 2 24 17 At5g49120 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 5 2 24 18 At5g51840 expressed protein 5 2 24 19 At5g51880 expressed protein 5 2 24 20 At5g52050 MATE efflux protein-related contains Pfam profile PF01554: Uncharacterized membrane protein family 5 2 24 21 At5g52100 "dihydrodipicolinate reductase family protein weak similarity to dihydrodipicolinate reductase [Corynebacterium glutamicum] GI:311768; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 5 2 24 22 At5g52270 vesicle transport protein-related similar to vesicle trafficking protein sec22b [Mus musculus] GI:1907386 5 2 24 23 At5g52330 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 2 24 24 At5g52510 scarecrow-like transcription factor 8 (SCL8) 5 2 24 25 At5g52550 expressed protein 5 2 25 1 At5g55210 expressed protein similar to unknown protein (pir||T04913) 5 2 25 2 At5g55270 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 5 2 25 3 At5g55450 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 5 2 25 4 At5g55507 hydroxyproline-rich glycoprotein family protein supported by full-length cDNA (cDNA confirms gene suggested by AE93TR-Brassica genomic sequence alignment) Awaiting Genbank accession. 5 2 25 5 At5g55640 expressed protein 5 2 25 6 At5g55700 glycosyl hydrolase family 14 protein similar to beta-amylase enzyme GI:6065749 from [Arabidopsis thaliana]; contains Pfam profile PF01373: Glycosyl hydrolase family 14 5 2 25 7 At5g55870 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 5 2 25 8 At5g55930 "oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}, oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 5 2 25 9 At5g58540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 5 2 25 10 At5g58580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 5 2 25 11 At5g58740 nuclear movement family protein contains Pfam profile: PF03593 nuclear movement protein 5 2 25 12 At5g58784 "dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative similar to GI:796076" 5 2 25 13 At5g58960 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 5 2 25 14 At5g59000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) ;contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 5 2 25 15 At5g59150 "Ras-related GTP-binding protein, putative similar to Ras-related protein Rab11C SP:Q40193 from [Lotus japonicus]" 5 2 25 16 At5g59190 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 5 2 25 17 At5g61800 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 2 25 18 At5g61865 expressed protein 5 2 25 19 At5g62050 OXA1 protein (OXA1) identical to AtOXA1 [Arabidopsis thaliana] GI:6624207 5 2 25 20 At5g62100 "BAG domain-containing protein similar to BAG domain containing proteins (At5g07220, At5g52060)" 5 2 25 21 At5g62260 "AT hook motif-containing protein contains Pfam PF03479: Domain of unknown function (DUF296); contains Pfam PF02178: AT hook motif; similar to AT-Hook DNA-Binding Protein SAP1 protein (GI:4165183) [Antirrhinum majus]; similar to AT-hook protein 2, Arabidopsis thaliana, EMBL:ATAJ4119" 5 2 25 22 At5g62320 myb family transcription factor (MYB99) contains PFAM profile: myb DNA binding domain PF00249 5 2 25 23 At5g62480 "glutathione S-transferase, putative " 5 2 25 24 At5g62540 "ubiquitin-conjugating enzyme 3 (UBC3) E2; identical to gi:431261, SP:P42746" 5 2 25 25 At5g65080 MADS-box family protein 5 2 26 1 At5g65140 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 5 2 26 2 At5g65280 "lanthionine synthetase C-like family protein contains Pfam domain, PF05147: Lanthionine synthetase C-like protein" 5 2 26 3 At5g65340 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 5 2 26 4 At5g65495 expressed protein 5 2 26 5 At5g65550 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;similar to flavonol 3-O-glucosyltransferase (anthocyanin rhamnosyl transferase) from Petunia hybrida [SP|Q43716] 5 2 26 6 At5g65700 "leucine-rich repeat transmembrane protein kinase, putative " 5 2 26 7 At5g65760 serine carboxypeptidase S28 family protein similar to SP|P42785 Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) {Homo sapiens}; contains Pfam profile PF05577: Serine carboxypeptidase S28    5 2 26 8 ath-MIR172c miRNA gene Arabidopsis thaliana miR172c stem-loop 5 2 26 9 ath-MIR156c miRNA gene Arabidopsis thaliana miR156c stem-loop 5 2 26 10 ath-MIR169l miRNA gene Arabidopsis thaliana miR169l stem-loop 5 2 26 11 ath-MIR395c miRNA gene Arabidopsis thaliana miR395c stem-loop 5 2 26 12 3xSSC 3xSSC 5 2 26 13 3xSSC 3xSSC 5 2 26 14 3xSSC 3xSSC 5 2 26 15 3xSSC 3xSSC 5 2 26 16 At3g44713 hypothetical protein 5 2 26 17 At3g44750 "histone deacetylase, putative (HD2A) contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA putative histone deacetylase (HD2A) GI:11066134" 5 2 26 18 At3g44900 "cation/hydrogen exchanger, putative (CHX4) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 5 2 26 19 At3g44950 glycine-rich protein 5 2 26 20 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 5 2 26 21 At3g45160 expressed protein 5 2 26 22 At3g45370 hypothetical protein 5 2 26 23 At3g45430 lectin protein kinase family protein contains Pfam domains PF00138: Legume lectins alpha domain and PF00069: Protein kinase domain 5 2 26 24 Blank Blank 5 2 26 25 Blank Blank 5 3 1 1 atc03 Randomly generated negative control 5 3 1 2 atc09 Randomly generated negative control 5 3 1 3 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 5 3 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 5 3 1 5 Alien5 Control: Stratagene Spotreport Alien Oligo 5 3 1 6 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 5 3 1 7 atc07 Randomly generated negative control 5 3 1 8 Alien1 Control: Stratagene Spotreport Alien Oligo 5 3 1 9 At1g02030 "zinc finger (C2H2 type) family protein identical to C2H2 zinc finger protein ZAT1 [Arabidopsis thaliana] gi|1418321|emb|CAA67227; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 3 1 10 At1g02065 squamosa promoter-binding protein-like 8 (SPL8) identical to squamosa promoter binding protein-like 8 [Arabidopsis thaliana] GI:5931679; contains Pfam profile PF03110: SBP domain 5 3 1 11 At1g02190 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]" 5 3 1 12 At1g02220 no apical meristem (NAM) family protein similar to NAC domain protein NAC2 (GI:15148914) {Phaseolus vulgaris}; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana}; contains Pfam PF02365 : No apical meristem (NAM) protein 5 3 1 13 At1g02400 "gibberellin 2-oxidase, putative / GA2-oxidase, putative similar to GA2ox2 [GI:4678368]; similar to dioxygenase GI:1666096 from [Marah macrocarpus]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 5 3 1 14 At1g02450 NPR1/NIM1-interacting protein 1 (NIMIN-1) identical to NIMIN-1 protein [Arabidopsis thaliana] gi|12057154|emb|CAC19844; identical to cDNA NIMIN-1 protein (nimin-1 gene)GI:12057153 5 3 1 15 At1g02640 glycosyl hydrolase family 3 protein similar to beta-xylosidase GB:Z84377 GI:2102655 from [Aspergillus niger] 5 3 1 16 At1g02690 "importin alpha-2 subunit, putative similar to importin alpha-2 subunit (Karyopherin alpha-2 subunit) (KAP alpha) SP:O04294 from [Arabidopsis thaliana]" 5 3 1 17 At1g05290 hypothetical protein 5 3 1 18 At1g05340 expressed protein 5 3 1 19 At1g05500 C2 domain-containing protein similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 5 3 1 20 At1g05560 UDP-glucose transferase (UGT75B2) similar to UDP-glucose:indole-3-acetate beta-D-glucosyltransferase GI:2149127 from (Arabidopsis thaliana); identical to cDNA UDP-glucosyltransferase (UGT75B2) GI:13661274 5 3 1 21 At1g05710 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413; identical to bHLH transcription factor (bHLH-alpha gene)" 5 3 1 22 At1g05750 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 1 23 At1g05880 expressed protein 5 3 1 24 At1g05920 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 5 3 1 25 At1g08440 hypothetical protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 5 3 2 1 At1g08490 "cysteine desulfurase, putative similar to nitrogen fixation protein (nifS) GB:D64004 GI:1001701 from [Synechocystis sp]; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V" 5 3 2 2 At1g08660 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 5 3 2 3 At1g08700 presenilin family protein similar to SP|P52166 Presenilin sel-12 {Caenorhabditis elegans}; contains Pfam profile PF01080: Presenilin 5 3 2 4 At1g08830 superoxide dismutase [Cu-Zn] (SODCC) / copper/zinc superoxide dismutase (CSD1) identical to SWISS-PROT: P24704 5 3 2 5 At1g08900 sugar transporter-related contains similarity to sugar-porter family protein 2 GI:14585701 from [Arabidopsis thaliana] 5 3 2 6 At1g09060 "transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain, PF02373: jmjC domain" 5 3 2 7 At1g09140 SF2/ASF-like splicing modulator (SRP30) nearly identical to SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana] GI:4775270 5 3 2 8 At1g11700 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 5 3 2 9 At1g11760 expressed protein weak similarity to Pfam PF01648: 4'-phosphopantetheinyl transferase superfamily 5 3 2 10 At1g11900 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 2 11 At1g11930 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 5 3 2 12 At1g12080 expressed protein 5 3 2 13 At1g12130 flavin-containing monooxygenase family protein / FMO family protein contains similarity to flavin-containing monooxygenase 2 (FMO2) from Homo sapiens [GI:1834493]; contains Pfam profile PF00743 Flavin-binding monooxygenase-like 5 3 2 14 At1g12310 "calmodulin, putative similar to calmodulin SP:P04465 from [Trypanosoma brucei gambiense]" 5 3 2 15 At1g12370 type II CPD photolyase PHR1 (PHR1) nearly identical to type II CPD photolyase PHR1 [Arabidopsis thaliana] GI:2984707; similar to class II DNA photolyase (GI:5081541) [Chlamydomonas reinhardtii]; supporting cDNA gi|2984706|gb|AF053365.1|AF053365 5 3 2 16 At1g15125 S-adenosyl-L-methionine:carboxyl methyltransferase family protein low similarity to caffeine synthase [Camellia sinensis] GI:9967143; contains Pfam profile PF03492: SAM dependent carboxyl methyltransferase 5 3 2 17 At1g15160 MATE efflux family protein Strong similarity to gi|4734005 F3L12.7 hypothetical protein from Arabidopsis thaliana BAC gb|AC007178; similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 5 3 2 18 At1g15280 glycine-rich protein 5 3 2 19 At1g15350 expressed protein 5 3 2 20 At1g15460 anion exchange family protein member of the PF|00955 Anion exchanger family 5 3 2 21 At1g15520 ABC transporter family protein similar to ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia] 5 3 2 22 At1g15720 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain 5 3 2 23 At1g15780 expressed protein 5 3 2 24 At1g18540 60S ribosomal protein L6 (RPL6A) similar to 60S ribosomal protein L6 GI:7208784 from [Cicer arietinum] 5 3 2 25 At1g18600 rhomboid family protein contains Pfam profile PF01694: Rhomboid family 5 3 3 1 At1g18770 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 3 2 At1g18840 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 5 3 3 3 At1g19010 expressed protein 5 3 3 4 At1g19040 hypothetical protein 5 3 3 5 At1g19190 expressed protein contains similarity to anther-specific and pathogenesis response protein (PrMC3) GI:5487873 from [Pinus radiata] 5 3 3 6 At1g19250 flavin-containing monooxygenase family protein / FMO family protein low similarity to SP|P97501 Dimethylaniline monooxygenase [N-oxide forming] 3 (EC 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) {Mus musculus}; contains Pfam profile PF00743: Flavin-binding monooxygenase-like 5 3 3 7 At1g22150 sulfate transporter (Sultr1;3) identical to sulfate tansporter Sultr1;3 [Arabidopsis thaliana] GI:10716805; contains Pfam profile PF00916: Sulfate transporter family; contains Pfam profile PF01740: STAS domain; contains TIGRfam profile TIGR00815: sulfate permease 5 3 3 8 At1g22210 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) GI:2944180 from [Arabidopsis thaliana]; contains Pfam profile PF02358: Trehalose-phosphatase" 5 3 3 9 At1g22310 "DNA-binding protein-related contains Pfam profiles PF02178: AT hook motif, PF01429: Methyl-CpG binding domain" 5 3 3 10 At1g22370 UDP-glucoronosyl/UDP-glucosyl transferase family protein glycosyltransferase family 5 3 3 11 At1g22570 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 5 3 3 12 At1g22620 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to cDNA SAC domain protein 1 (SAC1) SAC1-FRA7 allele, GI:31415718" 5 3 3 13 At1g22770 gigantea protein (GI) identical to gigantea protein SP:Q9SQI2 from [Arabidopsis thaliana] 5 3 3 14 At1g22840 "cytochrome c, putative similar to cytochrome c [Pumpkin, Winter squash] SWISS-PROT:P00051" 5 3 3 15 At1g26380 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 3 3 16 At1g26440 expressed protein similar to SP|Q41706 A3 protein (unknown function) {Vigna unguiculata} 5 3 3 17 At1g26630 "eukaryotic translation initiation factor 5A, putative / eIF-5A, putative strong similariy to SP|Q9AXQ6 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Lycopersicon esculentum}" 5 3 3 18 At1g26665 expressed protein 5 3 3 19 At1g26800 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 3 20 At1g26860 hypothetical protein 5 3 3 21 At1g27060 regulator of chromosome condensation (RCC1) family protein low similiarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 5 3 3 22 At1g27120 galactosyltransferase family protein contains Pfam profile:PF01762 galactosyltransferase 5 3 3 23 At1g29970 "expressed protein similar to GI:3128228 from [Arabidopsis thaliana] (Nature 402 (6763), 761-768 (1999))" 5 3 3 24 At1g30020 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 5 3 3 25 At1g30200 F-box family protein contains Pfam PF00646: F-box domain; similar to hypothetical protein GI:2832643 from [Arabidopsis thaliana] 5 3 4 1 At1g30260 expressed protein 5 3 4 2 At1g30475 expressed protein 5 3 4 3 At1g30510 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751" 5 3 4 4 At1g30670 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 3 4 5 At1g30730 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 3 4 6 At1g33760 "AP2 domain-containing transcription factor, putative similar to TINY GB: CAA64359 GI:1246403 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain" 5 3 4 7 At1g33811 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 5 3 4 8 At1g33990 "hydrolase, alpha/beta fold family protein similar to polyneuridine aldehyde esterase GI:6651393 from [Rauvolfia serpentina], SP|Q40708 PIR7A protein {Oryza sativa}, ethylene-induced esterase [Citrus sinensis] GI:14279437; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 3 4 9 At1g34030 40S ribosomal protein S18 (RPS18B) similar to ribosomal protein S18 GI:38422 from [Homo sapiens] 5 3 4 10 At1g34210 somatic embryogenesis receptor-like kinase 2 (SERK2) nearly identical to somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana] GI:14573457; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; identical to cDNA somatic embryogenesis receptor-like kinase 2 (SERK2) GI:14573456 5 3 4 11 At1g34290 "leucine-rich repeat family protein conatins leucine rich repeat (LRR) domains, Pfam:PF00560; contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]" 5 3 4 12 At1g34460 "cyclin, putative strong similarity to cyclin [Arabidopsis thaliana] GI:1360646" 5 3 4 13 At1g34520 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 5 3 4 14 At1g44760 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 5 3 4 15 At1g44820 "aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative similar to aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase ACY-1)[Homo sapiens] SWISS-PROT:Q03154" 5 3 4 16 At1g45010 expressed protein 5 3 4 17 At1g45110 tetrapyrrole methylase family protein contains Pfam PF00590 : Tetrapyrrole (Corrin/Porphyrin) Methylases domain; contains TIGRFAMS TIGR00522 : diphthine synthase 5 3 4 18 At1g45332 "mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae]" 5 3 4 19 At1g45688 expressed protein 5 3 4 20 At1g47230 "cyclin, putative similar to cyclin A-like protein [Nicotiana tabacum] GI:1064931, A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 5 3 4 21 At1g47280 expressed protein 5 3 4 22 At1g50220 hypothetical protein 5 3 4 23 At1g50280 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 5 3 4 24 At1g50470 hypothetical protein 5 3 4 25 At1g50530 hypothetical protein 5 3 5 1 At1g50720 "stigma-specific Stig1 family protein similar to stigma-specific protein STIG1 [Nicotiana tabacum] GI:496647; contains Pfam profile PF04885: Stigma-specific protein, Stig1" 5 3 5 2 At1g50780 hypothetical protein weak similarity to aldehyde oxidase [Arabidopsis thaliana] GI:3172025 5 3 5 3 At1g50990 protein kinase-related low similarity to SP|Q06548|APKA_ARATH Protein kinase APK1A Arabidopsis thaliana; contains Pfam profile: PF00069: Eukaryotic protein kinase domain; contains non-consensus (GC) splice site at intron 6 5 3 5 4 At1g51060 "histone H2A, putative similar to histone H2A GI:7595337 from Arabidopsis thaliana, Triticum aestivum GI:536892, Picea abies SP|P35063; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 5 3 5 5 At1g53700 "protein kinase, putative similar to cucumber protein kinase CsPK3 [Cucumis sativus] gi|7416109|dbj|BAA93704" 5 3 5 6 At1g53760 expressed protein 5 3 5 7 At1g53920 GDSL-motif lipase/hydrolase family protein similar to Anther-specific proline-rich proteins SP|P40603 SP|P40602 from {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 5 3 5 8 At1g53980 polyubiquitin-related contains similarity to polyubiquitin GI:166336 from (Aglaothamnion neglectum) 5 3 5 9 At1g54100 "aldehyde dehydrogenase, putative / antiquitin, putative strong similarity to SP|Q41247 Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Brassica turgor-responsive/drought-induced gene 26 protein) (Btg-26) {Brassica napus}; similar to turgor-responsive protein 26G (aldehyde dehydrogenase family 7 member A1) [Pisum sativum] SWISS-PROT:P25795" 5 3 5 10 At1g54150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 5 11 At1g54310 expressed protein 5 3 5 12 At1g54350 ABC transporter family protein similar to hypothetical ABC transporter ATP-binding protein GI:9955395 from [Microcystis aeruginosa] 5 3 5 13 At1g57990 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 5 3 5 14 At1g58080 ATP phosphoribosyl transferase 1 (ATP-PRT1) identical to ATP phosphoribosyl transferase GI:6683617 from [Arabidopsis thaliana] 5 3 5 15 At1g58250 "SABRE, putative similar to SABRE (GI:719291) [Arabidopsis thaliana]" 5 3 5 16 At1g58280 expressed protein 5 3 5 17 At1g58460 expressed protein 5 3 5 18 At1g58684 "40S ribosomal protein S2, putative " 5 3 5 19 At1g59540 kinesin motor protein-related similar to kinesin motor protein (kin2) GI:2062751 from (Ustilago maydis) 5 3 5 20 At1g59590 expressed protein 5 3 5 21 At1g62520 expressed protein 5 3 5 22 At1g62590 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 5 23 At1g62760 invertase/pectin methylesterase inhibitor family protein low similarity to extensin [Volvox carteri] GI:21992 5 3 5 24 At1g62800 "aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana]" 5 3 5 25 At1g62940 "4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to gi:112801 from Petroselinum crispum, GB:AAD40664 from [Solanum tuberosum] (J. Biol. Chem. 266 (13), 8551-8559 (1991)); contains Pfam AMP-binding enzyme domain PF00501" 5 3 6 1 At1g62990 "homeodomain transcription factor (KNAT7) contains Pfam profiles: PF03789 ELK domain, PF03790 KNOX1 domain, PF03791 KNOX2 domain; similar to homeobox protein HD1 SP:P46606 from [Brassica napus]; identical to cDNA homeodomain transcription factor KNAT7 (KNAT7) GI:11878229" 5 3 6 2 At1g63140 "O-methyltransferase, putative similar to GI:2781394" 5 3 6 3 At1g63200 hypothetical protein 5 3 6 4 At1g65930 "isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative strong similarity to isocitrate dehydrogenase SP|Q40345 from [Medicago sativa]" 5 3 6 5 At1g65990 "type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein similar to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] GI:4928472; contains Pfam profiles PF00646: F-box domain, PF00578: AhpC/TSA family" 5 3 6 6 At1g66160 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 5 3 6 7 At1g66200 "glutamine synthetase, putative similar to glutamine synthetase, cytosolic isozyme (Glutamate-- ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899" 5 3 6 8 At1g66360 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 5 3 6 9 At1g66420 "hypothetical protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 5 3 6 10 At1g66590 cox19 family protein contains Pfam profile PF05490: Cox19 protein 5 3 6 11 At1g66640 expressed protein 5 3 6 12 At1g69310 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 5 3 6 13 At1g69360 expressed protein 5 3 6 14 At1g69510 expressed protein 5 3 6 15 At1g69530 "expansin, putative (EXP1) identical to expansin (At-EXP1) [Arabidopsis thaliana] GI:1041702; alpha-expansin gene family, PMID:11641069" 5 3 6 16 At1g69700 ABA-responsive protein (HVA22c) identical to AtHVA22c [Arabidopsis thaliana] GI:4884936 5 3 6 17 At1g69760 expressed protein 5 3 6 18 At1g69935 expressed protein 5 3 6 19 At1g70000 "DNA-binding family protein contains Pfam domains, PF00249: Myb-like DNA-binding domain and PF00098: Zinc knuckle" 5 3 6 20 At1g72810 "threonine synthase, putative strong similarity to SP|Q9S7B5 Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}" 5 3 6 21 At1g72850 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 5 3 6 22 At1g73030 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 5 3 6 23 At1g73100 "SET domain-containing protein (SUVH3) identical to SUVH3 [Arabidopsis thaliana] GI:13517747; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH3 (SUVH3) GI:14625477" 5 3 6 24 At1g73240 expressed protein 5 3 6 25 At1g73300 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare]; glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase; non-consensus donor splice site GA at exon 8 5 3 7 1 At1g73470 expressed protein 5 3 7 2 At1g73530 RNA recognition motif (RRM)-containing protein low similarity to SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) {Arabidopsis thaliana}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 5 3 7 3 AT5G57480 PC-1 C08 5 3 7 4 3XSSC PC-1 C20 5 3 7 5 AT1G29930 PC-1 G08 5 3 7 6 3XSSC PC-1 G20 5 3 7 7 AT3G44150 PC-1 K08 5 3 7 8 3XSSC PC-1 K20 5 3 7 9 AT4G00810 PC-1 O08 5 3 7 10 3XSSC PC-1 O20 5 3 7 11 At1g76370 "protein kinase, putative similar to protein kinase APK1B [Arabidopsis thaliana] SWISS-PROT:P46573; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 5 3 7 12 At1g76405 expressed protein 5 3 7 13 At1g76530 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 5 3 7 14 At1g76590 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 5 3 7 15 At1g76760 "thioredoxin family protein similar to thioredoxin CH2, M-type, chloroplast precursor GB:P23400 SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam profile: PF00085 Thioredoxin" 5 3 7 16 At1g76820 expressed protein 5 3 7 17 At1g76950 zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein identical to zinc finger protein PRAF1 [Arabidopsis thaliana] gi|15811367|gb|AAL08940. 5 3 7 18 At1g76990 ACT domain containing protein low similarity to uridylyltransferase SP|P56884 from Rhizobium meliloti; contains Pfam ACT domain PF01842 5 3 7 19 At1g79640 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 3 7 20 At1g79670 "wall-associated kinase, putative similar to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]; isoform contains non-consensus AT-acceptor splice site." 5 3 7 21 At1g79810 "Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: zinc finger C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino terminal region" 5 3 7 22 At1g79870 "oxidoreductase family protein contains Pfam profile: PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; similar to glyoxylate reductase from Thermococcus litoralis [gi:13515409]" 5 3 7 23 At1g79975 expressed protein 5 3 7 24 At1g80040 expressed protein 5 3 7 25 At1g80210 expressed protein 5 3 8 1 At1g80260 tubulin family protein 5 3 8 2 At2g03120 signal peptide peptidase family protein contains Pfam domain PF04258: Membrane protein of unknown function (DUF435) 5 3 8 3 At2g03180 hypothetical protein 5 3 8 4 At2g03360 "hypothetical protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 5 3 8 5 At2g03430 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 5 3 8 6 At2g03600 hypothetical protein similar to SP|Q41706 A3 protein (unknown function) {Vigna unguiculata} 5 3 8 7 At2g03680 expressed protein Alternative splicing exists based on EST evidence 5 3 8 8 At2g03850 "late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to low-temperature-regulated 14.8 kda protein [Brassica napus] GI:544698, cold-regulated gene cor15b [Arabidopsis thaliana] GI:456016; contains Pfam profile PF02987: Late embryogenesis abundant protein" 5 3 8 9 At2g03890 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 5 3 8 10 At2g07724 expressed protein 5 3 8 11 At2g07775 hypothetical protein 5 3 8 12 At2g09910 hypothetical protein 5 3 8 13 At2g10070 expressed protein very low similarity to AHM1 [Triticum aestivum] GI:6691467 5 3 8 14 At2g10500 "hypothetical protein similar to At2g10840, At5g35280, At2g05860, At4g07310, At4g07430, At1g39270" 5 3 8 15 At2g10836 hypothetical protein 5 3 8 16 At2g11200 F-box family protein 5 3 8 17 At2g11462 hypothetical protein 5 3 8 18 At2g16360 40S ribosomal protein S25 (RPS25A) 5 3 8 19 At2g16405 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo sapiens] 5 3 8 20 At2g16575 expressed protein 5 3 8 21 At2g16630 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 5 3 8 22 At2g16835 "water channel protein, putative similar to MipC [Mesembryanthemum crystallinum] gi|1657948|gb|AAB18227" 5 3 8 23 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 5 3 8 24 At2g17033 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 8 25 At2g17060 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 3 9 1 At2g19910 "RNA-dependent RNA polymerase family protein contains Pfam domain, PF05183: RNA dependent RNA polymerase" 5 3 9 2 At2g19950 expressed protein contains 2 transmembrane domains; weak similarity to HPSR2 - heavy chain potential motor protein (GI:871048) [Giardia intestinalis] 5 3 9 3 At2g20120 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502); identical to cDNA putative membrane protein COV (COV) GI:30059123" 5 3 9 4 At2g20160 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At17), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1b GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 5 3 9 5 At2g20360 expressed protein 5 3 9 6 At2g20420 "succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative identical to SP|O82662 Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS- beta) {Arabidopsis thaliana}; similar to SP|O97580 Succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.5) {Sus scrofa}; contains Pfam profiles PF00549: CoA-ligase, PF02222: ATP-grasp domain" 5 3 9 7 At2g20580 26S proteasome regulatory subunit S2 (RPN1) contains an APC-complex (cyclosome) and proteasome component repeat ( PS50248) 5 3 9 8 At2g20610 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 5 3 9 9 At2g23240 plant EC metallothionein-like family 15 protein identical to EC protein homolog 2 (SP:Q42377) {Arabidopsis thaliana}; identical to an EST: GB:X92116:ATECPRHOM; contains a vertebrate metallothionein signature (PS00203); contains Pfam profile PF02068: Plant PEC family metallothionein 5 3 9 10 At2g23310 RER1C protein identical to SP|Q9ZWI7 RER1C protein (AtRER1C) {Arabidopsis thaliana} 5 3 9 11 At2g23490 hypothetical protein 5 3 9 12 At2g23550 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 3 9 13 At2g23740 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 5 3 9 14 At2g23790 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 5 3 9 15 At2g23980 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC6) identical to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana] 5 3 9 16 At2g24010 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 5 3 9 17 At2g26860 F-box family protein contains F-box domain Pfam:PF00646 5 3 9 18 At2g26910 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza] 5 3 9 19 At2g27040 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|Q9QZ81 Eukaryotic translation initiation factor 2C 2 {Rattus norvegicus}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 5 3 9 20 At2g27080 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related contains 1 transmembrane domain; similar to hin1 homolog (GI:13122296) [Arabidopsis thaliana]; similar to hin1 (GI:22830759) [Nicotiana tabacum] 5 3 9 21 At2g27250 CLAVATA3 CLAVATA3/ESR-Related (CLE) family of proteins; ligand for CLV1; responsible for negative regulation of meristem cell differention and replacement 5 3 9 22 At2g27290 expressed protein 5 3 9 23 At2g27430 expressed protein 5 3 9 24 At2g27470 CCAAT-box binding transcription factor subunit HAP3-related contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to polymerase epsilon p17 subunit (DNA polymerase epsilon subunit 3) (YB-like protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus musculus]; 5 3 9 25 At2g30230 hypothetical protein 5 3 10 1 At2g30290 "vacuolar sorting receptor, putative similar to vacuolar sorting receptor homolog [Arabidopsis thaliana] GI:1737218" 5 3 10 2 At2g30440 chloroplast thylakoidal processing peptidase identical to chloroplast thylakoidal processing peptidase [Arabidopsis thaliana] GI:2769566; contains Pfam profile PF00461: Signal peptidase I; non-consensus CG acceptor site at the intron|exon 8 boundary 5 3 10 3 At2g30490 trans-cinnamate 4-monooxygenase / cinnamic acid 4-hydroxylase (C4H) (CA4H) / cytochrome P450 73 (CYP73) (CYP73A5) identical to SP|P92994| Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73). {Arabidopsis thaliana}; molecular marker C4H (GB:U71080) 5 3 10 4 At2g30630 expressed protein similar to H1-1flk [Arabidopsis thaliana] GI:388260 5 3 10 5 At2g30690 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593; expression supported by MPSS" 5 3 10 6 At2g30840 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 5 3 10 7 At2g30900 expressed protein 5 3 10 8 At2g33490 hydroxyproline-rich glycoprotein family protein Common family member:At3g26910 [Arabidopsis thaliana] 5 3 10 9 At2g33530 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat) 5 3 10 10 At2g33705 F-box family protein contains Pfam:PF00646 F-box domain 5 3 10 11 At2g33740 copper-binding protein (CUTA) identical to copper-binding protein CUTA GI:12963361 from [Arabidopsis thaliana]; contains Pfam profile: PF03091 CutA1 divalent ion tolerance protein 5 3 10 12 At2g33835 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 5 3 10 13 At2g33870 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303742 from [Pisum sativum]" 5 3 10 14 At2g34100 expressed protein similar to the Asp-rich region of GP|1633572|U52064 5 3 10 15 At2g34170 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 5 3 10 16 At2g36760 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 5 3 10 17 At2g36820 expressed protein 5 3 10 18 At2g36960 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 3 10 19 At2g37010 "ABC transporter family protein contains ABC transporter domain, Pfam:PF00005" 5 3 10 20 At2g37150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 10 21 At2g37190 60S ribosomal protein L12 (RPL12A) 5 3 10 22 At2g37340 "splicing factor RSZ33 (RSZ33) nearly identical to splicing factor RSZ33 [Arabidopsis thaliana] GI:9843663; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00098: Zinc knuckle" 5 3 10 23 At2g37410 mitochondrial import inner membrane translocase (TIM17) nearly identical to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana} 5 3 10 24 At2g40010 60S acidic ribosomal protein P0 (RPP0A) 5 3 10 25 At2g40050 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 3 11 1 At2g40150 expressed protein 5 3 11 2 At2g40205 60S ribosomal protein L41 (RPL41C) 5 3 11 3 At2g40370 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 5 3 11 4 At2g40410 "Ca(2+)-dependent nuclease, putative similar to Ca(2+)-dependent nuclease [Arabidopsis thaliana] GI:7684292" 5 3 11 5 At2g40560 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 3 11 6 At2g40620 bZIP transcription factor family protein identical to b-Zip DNA binding protein GI:2246376 from [Arabidopsis thaliana]; contains a bZIP transcription factor basic domain signature (PDOC00036) 5 3 11 7 At2g43180 expressed protein 5 3 11 8 At2g43200 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 5 3 11 9 At2g43390 expressed protein 5 3 11 10 At2g43440 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 5 3 11 11 At2g43610 "glycoside hydrolase family 19 protein similar to chitinase GI:17799 from [Brassica napus]; contains Pfam profiles PF00182: Chitinase class I, PF00187: Chitin recognition protein" 5 3 11 12 At2g43660 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 5 3 11 13 At2g43810 "small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative similar to SWISS-PROT:Q9Y4Y8 U6 snRNA-associated Sm-like protein LSm6 [Mus musculus]" 5 3 11 14 At2g43870 "polygalacturonase, putative / pectinase, putative similar to SP|P48979 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus persica}; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 5 3 11 15 At2g46500 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 5 3 11 16 At2g46540 expressed protein 5 3 11 17 At2g46710 "rac GTPase activating protein, putative similar to rac GTPase activating protein 2 [Lotus japonicus] GI:3695061; contains Pfam profiles PF00620: RhoGAP domain, PF00786: P21-Rho-binding domain" 5 3 11 18 At2g46770 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 5 3 11 19 At2g46900 "expressed protein contains Pfam profile PF04910: Protein of unknown function, DUF654" 5 3 11 20 At2g46950 cytochrome P450 family protein similar to cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; contains Pfam profile: PF00067: Cytochrome P450 5 3 11 21 At2g47115 expressed protein 5 3 11 22 At2g47170 ADP-ribosylation factor 1 (ARF1) identical to ADP-ribosylation factor ARF1({Arabidopsis thaliana} (SP:P36397) (GP:166586) 5 3 11 23 At3g02480 "ABA-responsive protein-related similar to ABA-inducible protein [Fagus sylvatica] GI:3901016, cold-induced protein kin1 [Brassica napus] GI:167146" 5 3 11 24 At3g02540 "ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain;" 5 3 11 25 At3g02670 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 5 3 12 1 At3g02730 "thioredoxin, putative similar to SP|P29450 Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum sativum}; contains Pfam profile: PF00085 Thioredoxin" 5 3 12 2 At3g02885 gibberellin-regulated protein 5 (GASA5) / gibberellin-responsive protein 5 identical to GASA5 [Arabidopsis thaliana] GI:1289320 5 3 12 3 At3g02940 myb family transcription factor (MYB107) contains Pfam profile: PF00249 Myb-like DNA-binding domain 5 3 12 4 At3g03120 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}" 5 3 12 5 At3g03180 Got1-like family protein contains Pfam profile: PF04178 Got1-like family 5 3 12 6 At3g05730 expressed protein 5 3 12 7 At3g05790 "Lon protease, putative similar to Lon protease homolog 2 SP:P93655" 5 3 12 8 At3g05950 "germin-like protein, putative similar to germin-like protein GLP6 [SP|P92997]; contains Pfam profile: PF01072 germin family" 5 3 12 9 At3g06000 leucine-rich repeat family protein contains Pfam doamin PF00560: Leucine Rich Repeat; contains similarity to RAN GTPase activating protein 2 [Arabidopsis thaliana] gi|6708468|gb|AAF25948 5 3 12 10 At3g06120 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 3 12 11 At3g06170 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 5 3 12 12 At3g06340 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 5 3 12 13 At3g06400 "DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain" 5 3 12 14 At3g09330 "amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 5 3 12 15 At3g09390 "metallothionein protein, putative (MT2A) identical to Swiss-Prot:P25860 metallothionein-like protein 2A (MT-2A) (MT-K) (MT-1G) [Arabidopsis thaliana]" 5 3 12 16 At3g09560 "lipin family protein contains Pfam profile: PF04571 lipin, N-terminal conserved region" 5 3 12 17 At3g09630 60S ribosomal protein L4/L1 (RPL4A) strong similarity to 60S ribosomal protein L1 GB:P49691 5 3 12 18 At3g09780 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 5 3 12 19 At3g09820 adenosine kinase 1 (ADK1) / adenosine 5'-phosphotransferase 1 identical to adenosine kinase 1 /adenosine 5'-phosphotransferase 1 SP:Q9SF85 from [Arabidopsis thaliana] 5 3 12 20 At3g09980 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 5 3 12 21 At3g10040 expressed protein est match 5 3 12 22 At3g12420 hypothetical protein 5 3 12 23 At3g12480 "transcription factor, putative " 5 3 12 24 At3g12650 expressed protein 5 3 12 25 At3g12690 "protein kinase, putative similar to viroid symptom modulation protein [Lycopersicon esculentum] gi|7672777|gb|AAF66637" 5 3 13 1 At3g12870 expressed protein 5 3 13 2 At3g12930 expressed protein contains Pfam domain PF02410: Domain of unknown function DUF143 5 3 13 3 At3g13062 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 5 3 13 4 At3g13080 ABC transporter family protein almost identical to MRP-like ABC transporter GI:2316016 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter 5 3 13 5 At3g15420 expressed protein 5 3 13 6 At3g15480 expressed protein 5 3 13 7 At3g15640 "cytochrome c oxidase family protein contains Pfam domain, PF01215: Cytochrome c oxidase subunit Vb" 5 3 13 8 At3g15690 "biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana]" 5 3 13 9 At3g15860 hypothetical protein 5 3 13 10 At3g15900 expressed protein 5 3 13 11 At3g16060 kinesin motor family protein similar to kinesin heavy chain member 2 GB:NP_032468 from [Mus musculus]; contains Pfam profile PF00225: Kinesin motor domain 5 3 13 12 At3g16120 "dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 5 3 13 13 At3g18773 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 13 14 At3g18810 protein kinase family protein contains Pfam PF00069: Protein kinase domain 5 3 13 15 At3g18960 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 5 3 13 16 At3g19010 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains similarity to flavonol synthase (FLS) from [Solanum tuberosum] SP|Q41452, {Petunia hybrida} SP|Q07512; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 5 3 13 17 At3g19170 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 5 3 13 18 At3g19230 leucine-rich repeat family protein contains Pfam profile:PF00560 LRR:Leucine Rich Repeat domains; similar to light repressible receptor protein kinase (GI:1321686)[Arabidopsis thaliana] 5 3 13 19 At3g19400 "cysteine proteinase, putative non-consensus AT acceptor site at exon 3; contains similarity to cysteine protease CYP1 GI:2828252, TDI-65 GI:5726641 from [Lycopersicon esculentum]" 5 3 13 20 At3g19450 cinnamyl-alcohol dehydrogenase (CAD) identical to SP|P48523 Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) (CAD) [Arabidopsis thaliana] 5 3 13 21 At3g22170 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 5 3 13 22 At3g22230 60S ribosomal protein L27 (RPL27B) similar to 60S RIBOSOMAL PROTEIN L27 GB:P41101 from [Solanum tuberosum] 5 3 13 23 At3g22400 "lipoxygenase, putative similar to lipoxygenase gi:8649004 [Prunus dulcis], gi:1495802 and gi:1495804 from [Solanum tuberosum]" 5 3 13 24 At3g22421 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 5 3 13 25 At3g22540 expressed protein 5 3 14 1 At3g22600 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 5 3 14 2 At3g22790 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 5 3 14 3 At3g22845 emp24/gp25L/p24 protein-related contains weak similarity to transmembrane protein (GI:1212965) [Homo sapiens] 5 3 14 4 At3g25740 metallopeptidase M24 family protein similar to SP|O33343 Methionine aminopeptidase (EC 3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis}; contains Pfam profile PF00557: metallopeptidase family M24 5 3 14 5 At3g25800 serine/threonine protein phosphatase 2A (PP2A) 65 KDa regulatory subunit A identical to protein phosphatase 2A 65 kDa regulatory subunit (pDF1) GI:683502 from [Arabidopsis thaliana] 5 3 14 6 At3g25920 "50S ribosomal protein L15, chloroplast (CL15) identical to GB:P25873 from [Arabidopsis thaliana]" 5 3 14 7 At3g25980 "mitotic spindle checkpoint protein, putative (MAD2) identical to Swiss-Prot:Q9LU93 mitotic spindle checkpoint protein MAD2 [Arabidopsis thaliana]" 5 3 14 8 At3g26120 "RNA-binding protein, putative similar to GB:AAC39463 from [Zea mays], PF00076 RNA recognition motif (2 copies)" 5 3 14 9 At3g26170 "cytochrome P450 71B19, putative (CYP71B19) Identical to cytochrome P450 71B19 (SP:Q9LTM4)[Arabidopsis thaliana];similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 5 3 14 10 At3g26330 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 5 3 14 11 At3g26390 hypothetical protein 5 3 14 12 At3g29080 hypothetical protein 5 3 14 13 At3g29150 expressed protein 5 3 14 14 At3g29265 hypothetical protein 5 3 14 15 At3g29305 hypothetical protein 5 3 14 16 At3g29450 hypothetical protein 5 3 14 17 At3g29590 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 5 3 14 18 At3g29763 hypothetical protein 5 3 14 19 At3g29790 hypothetical protein 5 3 14 20 At3g43880 "hypothetical protein p97 homologous protein, Canis familiaris, EMBL:CFA388531" 5 3 14 21 At3g43940 hypothetical protein 5 3 14 22 At3g44115 hypothetical protein 5 3 14 23 At3g44170 hypothetical protein 5 3 14 24 At3g44350 "no apical meristem (NAM) family protein Tobacco elicitor-responsive gene (TERN), NAC-domain protein, Nicotiana tabacum, EMBL:AB021178" 5 3 14 25 At3g44440 hypothetical protein 5 3 15 1 At3g44600 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to SP|P87051 Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8) (Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains Pfam profiles PF00160: peptidyl-prolyl cis-trans isomerase cyclophilin-type, PF00400: WD domain G-beta repeat" 5 3 15 2 At3g44670 "disease resistance protein RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to both RPP1 Ws-A and RPP1 Ws-C" 5 3 15 3 At3g47510 expressed protein 5 3 15 4 At3g47560 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 5 3 15 5 At3g47720 expressed protein 5 3 15 6 At3g47780 "ABC transporter family protein transport protein ABC-C, Homo sapiens, PIR2:S71363" 5 3 15 7 At3g47940 "DNAJ heat shock protein, putative similar to SP|O89114 DnaJ homolog subfamily B member 5 (Heat shock protein Hsp40-3) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 5 3 15 8 At3g48000 aldehyde dehydrogenase (ALDH2) identical to aldehyde dehydrogenase [Arabidopsis thaliana] GI:8574427; similar to mitochondrial aldehyde dehydrogenase [Arabidopsis thaliana] gi|19850249|gb|AAL99612; identical to cDNA aldehyde dehydrogenase AtALDH2a GI:20530140 5 3 15 9 At3g48160 "transcription factor, putative / E2F-like repressor E2L3 (E2L3) identical to E2F-like repressor E2L3 [Arabidopsis thaliana] GI:20502508" 5 3 15 10 At3g48195 phox (PX) domain-containing protein contains Pfam profile PF00787: PX domain 5 3 15 11 At3g51100 expressed protein 5 3 15 12 At3g51140 expressed protein 5 3 15 13 At3g51325 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097:Zinc finger, C3HC4 type (RING finger); low similarity to SPQ06003: Goliath protein (Contains 1 RING-type zinc finger) (G1 protein), Fruit fly" 5 3 15 14 At3g51370 "protein phosphatase 2C, putative / PP2C, putative similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain" 5 3 15 15 At3g51550 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 3 15 16 At3g51610 expressed protein 5 3 15 17 At3g51750 expressed protein 5 3 15 18 At3g51800 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 5 3 15 19 At3g54300 "synaptobrevin family protein similar to vesicle-associated membrane protein 7B (At VAMP7B), Arabidopsis thaliana, EMBL:AF025333" 5 3 15 20 At3g54350 "forkhead-associated domain-containing protein / FHA domain-containing protein MSP58 - nucleolar protein, Mus musculus, EMBL:AF015309" 5 3 15 21 At3g54500 expressed protein 5 3 15 22 At3g54560 histone H2A.F/Z identical to GI:2407800 5 3 15 23 At3g54740 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 5 3 15 24 At3g54800 "pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein contains Pfam profiles PF00169: Pleckstring homology (PH) domain, PF01852: Lipid-binding START domain" 5 3 15 25 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 5 3 16 1 At3g54970 expressed protein 5 3 16 2 At3g57790 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P15922 Exo-poly-alpha-D-galacturonosidase precursor (EC 3.2.1.82) (Exo-PG) {Erwinia chrysanthemi}; contains PF00295: Glycosyl hydrolases family 28 5 3 16 3 At3g57830 "leucine-rich repeat transmembrane protein kinase, putative several receptor-like protein kinases" 5 3 16 4 At3g58010 expressed protein 5 3 16 5 At3g58070 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 3 16 6 At3g58260 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 3 16 7 At3g58320 hypothetical protein 5 3 16 8 At3g58480 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 5 3 16 9 At3g58540 expressed protein 5 3 16 10 At3g61260 "DNA-binding family protein / remorin family protein similar to DNA-binding protein gi|601843 [Arabidopsis thaliana], remorin [Solanum tuberosum] GI:1881585; contains Pfam profiles PF03763: Remorin C-terminal region, PF03766: Remorin N-terminal region" 5 3 16 11 At3g61320 expressed protein contains Pfam PF05249: Uncharacterised protein family (UPF0187) 5 3 16 12 At3g61480 expressed protein 5 3 16 13 At3g61530 ketopantoate hydroxymethyltransferase family protein similar to SP|Q9Y7B6 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) {Emericella nidulans}; contains Pfam profile PF02548: Ketopantoate hydroxymethyltransferase 5 3 16 14 At3g61700 expressed protein 5 3 16 15 At3g61740 PHD finger family protein (ATX3) contains Pfam domains PF00628: PHD-finger and PF00855: PWWP domain; identical to cDNA trithorax 3 (ATX3) partial cds GI:15217142 5 3 16 16 At3g61890 homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 identical to homeobox-leucine zipper protein ATHB-12 (GI:6899887) [Arabidopsis thaliana] 5 3 16 17 At3g61950 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 3 16 18 At4g00895 "ATP synthase delta chain-related contains weak similarity to Swiss-Prot:P32980 ATP synthase delta chain, chloroplast precursor [Nicotiana tabacum]" 5 3 16 19 At4g00940 Dof-type zinc finger domain-containing protein similar to DNA-binding protein DAG1/BBFa GI:4581965 [Arabidopsis thaliana] 5 3 16 20 At4g01080 expressed protein 5 3 16 21 At4g01140 expressed protein 5 3 16 22 At4g01280 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 5 3 16 23 At4g01350 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 3 16 24 At4g01510 transmembrane ARV1-like family protein contains similarity to ARV1 [Homo sapiens] gi|12044055|gb|AAG47671 5 3 16 25 At4g01550 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365 : No apical meristem (NAM) protein 5 3 17 1 At4g04396 hypothetical protein 5 3 17 2 At4g04450 "WRKY family transcription factor similar to A. fatua wild oat ABF2 DNA-binding protein, GenBank accession number S61414" 5 3 17 3 At4g04640 "ATP synthase gamma chain 1, chloroplast (ATPC1) identical to SP|Q01908 ATP synthase gamma chain 1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis thaliana}" 5 3 17 4 At4g04700 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423; contains protein kinase domain, Pfam:PF00069" 5 3 17 5 At4g04870 CDP-alcohol phosphatidyltransferase family protein similar to SP|Q07560 Cardiolipin synthetase (EC 2.7.8.-) {Saccharomyces cerevisiae; contains Pfam profile PF01066: CDP-alcohol phosphatidyltransferase 5 3 17 6 At4g04920 expressed protein 5 3 17 7 At4g05050 polyubiquitin (UBQ11) identical to GI:304117 5 3 17 8 At4g05100 "myb family transcription factor (MYB74) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB74) mRNA, partial cds GI:3941505" 5 3 17 9 At4g09820 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 3 17 10 At4g09880 "hypothetical protein F21E10.5 Arabidopsis thaliana BAC F21E10, PID:g3047086" 5 3 17 11 At4g10020 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 5 3 17 12 At4g10080 expressed protein 5 3 17 13 At4g10220 "hypothetical protein IB1C3-1 protein, Arabidopsis thaliana, AJ011845" 5 3 17 14 At4g10270 wound-responsive family protein similar to wound induced protein (GI:19320) [Lycopersicon esculentum] 5 3 17 15 At4g10430 expressed protein 5 3 17 16 At4g10500 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to hyoscyamine 6 beta-hydroxylase [Atropa belladona][GI:4996123]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 5 3 17 17 At4g13280 "terpene synthase/cyclase family protein predicted protein, Arabidopsis thaliana" 5 3 17 18 At4g13330 expressed protein 5 3 17 19 At4g13480 "myb family transcription factor (MYB79) contains PFASM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB79) mRNA, partial cds GI:3941511" 5 3 17 20 At4g13530 "expressed protein predicted protein, Arabidopsis thaliana" 5 3 17 21 At4g13690 hypothetical protein 5 3 17 22 At4g13730 RabGAP/TBC domain-containing protein low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 5 3 17 23 At4g13870 Werner Syndrome-like exonuclease (WEX) contains Pfam profile PF01612: 3'-5' exonuclease; identical to Werner Syndrome-like exonuclease [Arabidopsis thaliana] GP:28195109 gb:AAO33765 5 3 17 24 At4g13920 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 5 3 17 25 At4g16270 peroxidase 40 (PER40) (P40) identical to SP|O23474 Peroxidase 40 precursor (EC 1.11.1.7) (Atperox P40) {Arabidopsis thaliana} 5 3 18 1 At4g16330 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonone-3-hydroxylase (naringenin,2-oxoglutarate 3-dioxygenase) from Malus domestica [SP|Q06942], Pyrus communis [GI:20269881]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 5 3 18 2 At4g16480 sugar transporter family protein similar to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit) [Homo sapiens]; contains Pfam profile PF00083: major facilitator superfamily protein 5 3 18 3 At4g16520 "autophagy 8f (APG8f) identical to autophagy 8f [Arabidopsis thaliana] GI:19912161; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 5 3 18 4 At4g16670 expressed protein 5 3 18 5 At4g16700 phosphatidylserine decarboxylase similar to SP|P27465 Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65 {Cricetulus griseus}; contains Pfam profile PF02666: phosphatidylserine decarboxylase 5 3 18 6 At4g16820 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 5 3 18 7 At4g16845 vernalization 2 protein (VRN2) identical to vernalization 2 protein [Arabidopsis thaliana] gi|16945788|gb|AAL32135 5 3 18 8 At4g19430 expressed protein 5 3 18 9 At4g19490 expressed protein 5 3 18 10 At4g19645 expressed protein 5 3 18 11 At4g19690 "iron-responsive transporter (IRT1) identical to Fe(II) transport protein [Arabidopsis thaliana] gi|1353266|gb|AAB01678; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 5 3 18 12 At4g19865 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 5 3 18 13 At4g19920 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 5 3 18 14 At4g20060 expressed protein ; expression supported by MPSS 5 3 18 15 At4g20110 "vacuolar sorting receptor, putative similar to BP-80 vacuolar sorting receptor [Pisum sativum] GI:1737222; identical to vacuolar sorting receptor-like protein (GI:2827665) [Arabidopsis thaliana]" 5 3 18 16 At4g22900 expressed protein 5 3 18 17 At4g22960 hypothetical protein contains Pfam domain PF04424: Protein of unknown function (DUF544) 5 3 18 18 At4g23140 receptor-like protein kinase 5 (RLK5) identical to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam domain PF00069: Protein kinase domain; identical to cDNA receptor-like protein kinase 5 (RLK5) GI:13506746 5 3 18 19 At4g23190 protein kinase family protein contains Pfam PF00069: Protein kinase domain 5 3 18 20 At4g23340 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin c20-oxidase [Pisum sativum] GI:6855711; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 5 3 18 21 At4g23390 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 5 3 18 22 At4g23530 expressed protein 5 3 18 23 At4g23590 "aminotransferase class I and II family protein similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 5 3 18 24 At4g26150 "zinc finger (GATA type) family protein Arabidopsis thaliana mRNA for GATA transcription factor 3, PID:e1254739" 5 3 18 25 At4g26210 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 5 3 19 1 At4g26370 antitermination NusB domain-containing protein contains Pfam profile: PF01029 NusB family 5 3 19 2 At4g26400 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 5 3 19 3 At4g26555 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to FK506-binding protein (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:P25138) [{Neisseria meningitidis]; contains Pfam profile: PF00254 FKBP-type peptidyl-prolyl cis-trans isomerases; similar to FK506-binding protein 39 kDa (Peptidyl-prolyl cis-trans isomerase) (PPiase) (EC 5.2.1.8) (SP:O74191) {Schizosaccharomyces pombe} 5 3 19 4 At4g26590 oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}; contains Pfam profile PF03169: OPT oligopeptide transporter protein 5 3 19 5 At4g26740 embryo-specific protein 1 (ATS1) identical to embryo-specific protein 1 [Arabidopsis thaliana] GI:3335169 5 3 19 6 At4g26800 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 19 7 At4g29380 "protein kinase family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; contains Pfam PF00069: Protein kinase domain; contains PF02985: HEAT repeat; similar to adaptor protein (GI:1817584) [Homo sapiens]; similar to VPS15 protein (GI:6103009) [Pichia pastoris]" 5 3 19 8 At4g29440 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 5 3 19 9 At4g29620 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 2 (CDA2) [Arabidopsis thaliana] GI:5080713, cytidine deaminase homolog DesE [Arabidopsis thaliana] GI:4836447; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 5 3 19 10 At4g29670 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin 5 3 19 11 At4g29820 expressed protein 5 3 19 12 At4g29860 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); WDVCF variant 1 (gi:12006981) [Mus musculus] 5 3 19 13 At4g30030 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 5 3 19 14 At4g30090 expressed protein 5 3 19 15 At4g32570 expressed protein 5 3 19 16 At4g32610 "mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SP|P40513 Mitochondrial acidic protein MAM33, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF02330: Mitochondrial glycoprotein" 5 3 19 17 At4g32790 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 5 3 19 18 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 5 3 19 19 At4g32960 expressed protein 5 3 19 20 At4g33010 "glycine dehydrogenase [decarboxylating], putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative strong similarity to SP|P49361 Glycine dehydrogenase [decarboxylating] A, mitochondrial precursor (EC 1.4.4.2) {Flaveria pringlei}; contains Pfam profile PF02347: Glycine cleavage system P-protein" 5 3 19 21 At4g33170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 19 22 At4g33240 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to SP|Q9Z1T6 FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60 chaperonin family" 5 3 19 23 AT5G57480 PC-1 C08 5 3 19 24 3XSSC PC-1 C20 5 3 19 25 AT1G29930 PC-1 G08 5 3 20 1 3XSSC PC-1 G20 5 3 20 2 AT3G44150 PC-1 K08 5 3 20 3 3XSSC PC-1 K20 5 3 20 4 AT4G00810 PC-1 O08 5 3 20 5 3XSSC PC-1 O20 5 3 20 6 At4g35800 DNA-directed RNA polymerase II largest subunit (RPB205) (RPII) (RPB1) nearly identical to P|P18616 DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6) {Arabidopsis thaliana} 5 3 20 7 At4g35860 "Ras-related GTP-binding protein, putative similar to Rab2-like GTP-binding protein GI:1765896 from [Arabidopsis thaliana]" 5 3 20 8 At4g36010 pathogenesis-related thaumatin family protein similar to receptor serine/threonine kinase PR5K [Arabidopsis thaliana] GI:1235680; contains Pfam profile PF00314: Thaumatin family 5 3 20 9 At4g36050 endonuclease/exonuclease/phosphatase family protein 5 3 20 10 At4g36195 serine carboxypeptidase S28 family protein contains Pfam PF05577: Serine carboxypeptidase S28 5 3 20 11 At4g36250 "aldehyde dehydrogenase family protein contais aldehyde dehydrogenase (NADP) family protein domain, Pfam:PF00171" 5 3 20 12 At4g36440 expressed protein 5 3 20 13 At4g36500 expressed protein 5 3 20 14 At4g39150 "DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein, Saccharomyces cerevisiae, PIR2:S48085; contains Pfam profile PF00226 DnaJ domain" 5 3 20 15 At4g39210 glucose-1-phosphate adenylyltransferase large subunit 3 (APL3) / ADP-glucose pyrophosphorylase identical to SP|P55231 5 3 20 16 At4g39300 expressed protein 5 3 20 17 At4g39370 "ubiquitin-specific protease 27, putative (UBP27) similar to GI:11993494; ubiquitin specific protease 66 - Gallus gallus,PID:g3800764" 5 3 20 18 At4g39520 "GTP-binding protein, putative similar to SP|Q9Y295 Developmentally regulated GTP-binding protein 1 (DRG 1) {Homo sapiens}; contains Pfam profiles PF02824: TGS domain, PF01018: GTP1/OBG family" 5 3 20 19 At4g39560 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; contains Prosite PS00018: EF-hand calcium-binding domain 5 3 20 20 At4g39720 VQ motif-containing protein contains PF05678: VQ motif 5 3 20 21 At4g39756 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 5 3 20 22 At5g03290 "isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative strong similarity to isocitrate dehydrogenase (NAD+) [Nicotiana tabacum] GI:3021506" 5 3 20 23 At5g03345 expressed protein 5 3 20 24 At5g03480 expressed protein ; expression supported by MPSS 5 3 20 25 At5g03540 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit 5 3 21 1 At5g03700 PAN domain-containing protein contains Pfam profile: PF00024 PAN domain 5 3 21 2 At5g03760 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 5 3 21 3 At5g03930 expressed protein 5 3 21 4 At5g03990 "expressed protein predicted protein, Arabidopsis thaliana" 5 3 21 5 At5g06570 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 5 3 21 6 At5g06630 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 5 3 21 7 At5g06800 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 3 21 8 At5g06850 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 5 3 21 9 At5g07010 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 5 3 21 10 At5g07070 CBL-interacting protein kinase 2 (CIPK2) identical to CBL-interacting protein kinase 2 [Arabidopsis thaliana] gi|9280636|gb|AAF86506 5 3 21 11 At5g07225 zinc finger (C3HC4-type RING finger) family protein similar to SP:O54965 RING finger protein 13 {Mus musculus} RING zinc finger protein 5 3 21 12 At5g07280 "leucine-rich repeat protein kinase, putative / extra sporogenous cells (ESP) identical to extra sporogenous cells [Arabidopsis thaliana] gi|23304947|emb|CAD42912; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain" 5 3 21 13 At5g10370 "helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related similar to RNA-dependent ATPase/helicase Cdc28p [Schizosaccharomyces pombe] GI:1439562; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, weak hit to PF00097: Zinc finger, C3HC4 type (RING finger), PF01485: IBR domain" 5 3 21 14 At5g10430 arabinogalactan-protein (AGP4) identical to gi_3883126_gb_AAC77826 5 3 21 15 At5g10590 expressed protein 5 3 21 16 At5g10650 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 5 3 21 17 At5g10790 "ubiquitin-specific protease 22 (UBP22) almost identical to ubiquitin-specific protease 22 GI:11993484 [Arabidopsis thaliana], one amino acid difference" 5 3 21 18 At5g10850 expressed protein 5 3 21 19 At5g11010 pre-mRNA cleavage complex-related low similarity to SP|Q92989 Pre-mRNA cleavage complex II protein Clp1 {Homo sapiens} 5 3 21 20 At5g11070 expressed protein 5 3 21 21 At5g14210 "leucine-rich repeat transmembrane protein kinase, putative " 5 3 21 22 At5g14260 "SET domain-containing protein low similarity to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 5 3 21 23 At5g14440 surfeit locus 2 protein-related / SURF2 protein-related contains weak hit to Pfam profile PF05477: Surfeit locus protein 2 (SURF2) 5 3 21 24 At5g14500 "aldose 1-epimerase family protein similar to apospory-associated protein C, Chlamydomonas reinhardtii, EMBL:AF195243 Pfam profile PF01263: Aldose 1-epimerase" 5 3 21 25 At5g14650 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase PG1 GP|5669846, PG2 GI:5669848 from [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 5 3 22 1 At5g14710 expressed protein 5 3 22 2 At5g14890 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 5 3 22 3 At5g14940 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 5 3 22 4 At5g17620 expressed protein 5 3 22 5 At5g17680 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 3 22 6 At5g17820 peroxidase 57 (PER57) (P57) (PRXR10) identical to SP|Q43729 Peroxidase 57 precursor (EC 1.11.1.7) (Atperox P57) (PRXR10) (ATP13a) {Arabidopsis thaliana} 5 3 22 7 At5g17880 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 5 3 22 8 At5g18065 expressed protein 5 3 22 9 At5g18120 expressed protein 5 3 22 10 At5g18270 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 5 3 22 11 At5g18310 "expressed protein predicted proteins, Drosophila melanogaster" 5 3 22 12 At5g20910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 22 13 At5g20950 "glycosyl hydrolase family 3 protein beta-D-glucan exohydrolase, Nicotiana tabacum, EMBL:AB017502" 5 3 22 14 At5g21110 "hypothetical protein predicted protein - Arabidopsis thaliana, EMBL:AL163852" 5 3 22 15 At5g21160 "La domain-containing protein / proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965, PF05383: La domain" 5 3 22 16 At5g22000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 3 22 17 At5g22050 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 5 3 22 18 At5g22190 hypothetical protein 5 3 22 19 At5g22250 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 5 3 22 20 At5g24880 expressed protein ; expression supported by MPSS 5 3 22 21 At5g24940 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase type 2C - Lotus japonicus, EMBL:AF092432" 5 3 22 22 At5g25120 "cytochrome P450 family protein CYTOCHROME P450 71B1 - Thlaspi arvense, EMBL:L24438" 5 3 22 23 At5g25180 "cytochrome P450 71B14, putative (CYP71B14) Identical to cytochrome P450 71B14 (SP:P58051) [Arabidopsis thaliana]; cytochrome P450 71B1, Thlaspi arvense, SWISSPROT:C7B1_THLAR; similar to cytochrome P450 CYP83D1p (GIi:2739002) [Glycine max]" 5 3 22 24 At5g25340 expressed protein 5 3 22 25 At5g25390 "AP2 domain-containing transcription factor, putative AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] EMBL:AF003097" 5 3 23 1 At5g25500 expressed protein ; expression supported by MPSS 5 3 23 2 At5g25540 expressed protein 5 3 23 3 At5g28550 hypothetical protein 5 3 23 4 At5g28615 hypothetical protein 5 3 23 5 At5g28780 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 5 3 23 6 At5g28823 hypothetical protein 5 3 23 7 At5g29000 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 3 23 8 At5g29210 hypothetical protein 5 3 23 9 At5g31753 hypothetical protein 5 3 23 10 At5g32405 hypothetical protein 5 3 23 11 At5g37560 zinc finger protein-related contains weak similarity to zinc fingers and Pfam:PF01485 IBR domain 5 3 23 12 At5g37620 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 3 23 13 At5g37810 major intrinsic family protein / MIP family protein similar to pollen-specific membrane integral protein SP:P49173 from [Nicotiana alata]; contains Pfam profile: MIP PF00230 5 3 23 14 At5g37870 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 5 3 23 15 At5g38040 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 5 3 23 16 At5g38100 "methyltransferase-related similar to defense-related protein cjs1 [Brassica carinata][GI:14009292], caffeine synthase [Camellia sinensis][GI:9967143], SAM:benzoic acid carboxyl methyltransferase [Antirrhinum majus][GI:9789277]" 5 3 23 17 At5g38270 F-box family protein contains F-box domain Pfam:PF00646 5 3 23 18 At5g38330 "plant defensin-fusion protein, putative contains a plant defensin motif, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)" 5 3 23 19 At5g41160 "purine permease-related similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 5 3 23 20 At5g41220 "glutathione S-transferase, putative similar to emb|CAA10662" 5 3 23 21 At5g41400 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHA1a [Arabidopsis thaliana] GI:3790554; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 5 3 23 22 At5g41470 hypothetical protein similar to unknown protein (gb|AAF23339.1) 5 3 23 23 At5g41640 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626); expression supported by MPSS 5 3 23 24 At5g41685 mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1) identical to SP|Q9ASY8 Mitochondrial import receptor subunit TOM7 (Translocase of outer membrane 7 kDa subunit) {Arabidopsis thaliana} 5 3 23 25 At5g41830 "F-box family protein-related contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At3g44180, At1g56610, At3g58890, At1g48390, At3g59270 [Arabidopsis thaliana]" 5 3 24 1 At5g41890 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 5 3 24 2 At5g44540 tapetum-specific protein-related similar to SaTAP 35 [Sinapis alba] GI:408108 5 3 24 3 At5g44580 expressed protein 5 3 24 4 At5g44730 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q94915 Rhythmically expressed gene 2 protein (DREG-2) {Drosophila melanogaster}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 5 3 24 5 At5g44760 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 5 3 24 6 At5g44930 exostosin family protein contains Pfam profile: PF03016 Exostosin family 5 3 24 7 At5g44980 F-box family protein contains F-box domain Pfam:PF00646 5 3 24 8 At5g45120 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 5 3 24 9 At5g45180 flavin-containing monooxygenase family protein / FMO family protein low similarity to SP|P31513 Dimethylaniline monooxygenase [N-oxide forming] 3 (EC 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) {Homo sapiens}; contains Pfam profile PF00743: Flavin-binding monooxygenase-like 5 3 24 10 At5g47720 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 5 3 24 11 At5g47780 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8; strong similarity to unknown protein (emb|CAB71043.1) 5 3 24 12 At5g47930 40S ribosomal protein S27 (RPS27D) 5 3 24 13 At5g47990 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]; 5 3 24 14 At5g48170 F-box family protein contains Pfam PF00646: F-box domain; similar to unknown protein (pir||T09884); 5 3 24 15 At5g48220 "indole-3-glycerol phosphate synthase, putative similar to SP|P49572" 5 3 24 16 At5g48380 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 5 3 24 17 At5g48420 hypothetical protein 5 3 24 18 At5g51120 "polyadenylate-binding protein, putative / PABP, putative contains similarity to poly(A)-binding protein II [Mus musculus] GI:2351846; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 3 24 19 At5g51180 expressed protein 5 3 24 20 At5g51310 "gibberellin 20-oxidase-related low similarity to GI:9791186, GI:1109695" 5 3 24 21 At5g51370 F-box family protein similar to unknown protein (emb|CAB82288.1) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 5 3 24 22 At5g51540 "peptidase M3 family protein / thimet oligopeptidase family protein low similarity to SP|Q99797 Mitochondrial intermediate peptidase, mitochondrial precursor (EC 3.4.24.59) {Homo sapiens}; contains Pfam profile PF01432: Peptidase family M3" 5 3 24 23 At5g51600 "microtubule associated protein (MAP65/ASE1) family protein low similarity to SP|P50275 Anaphase spindle elongation protein {Saccharomyces cerevisiae}, protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family)" 5 3 24 24 At5g51740 "peptidase M48 family protein contains Pfam domain, PF01435: Peptidase family M48" 5 3 24 25 At5g51795 Kin17 DNA-binding protein-related 5 3 25 1 At5g54550 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 5 3 25 2 At5g54590 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 5 3 25 3 At5g54740 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 2S seed storage proteins from Arabidosis thaliana: SP|P15457, SP|P15459, SP|P15458, SP|P15460 contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family" 5 3 25 4 At5g54790 hypothetical protein 5 3 25 5 At5g54940 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 5 3 25 6 At5g54980 integral membrane family protein similar to unknown protein (gb|AAD50013.1); contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 5 3 25 7 At5g55120 expressed protein strong similarity to unknown protein (pir||T04808) 5 3 25 8 At5g55160 small ubiquitin-like modifier 2 (SUMO) similar to ubiquitin-like protein SMT3 SP:P55852 from [Arabidopsis thaliana]; identical to cDNA small ubiquitin-like modifier 2 (SUMO) GI:22652843; contains Pfam profile PF00240: Ubiquitin family 5 3 25 9 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 5 3 25 10 At5g57887 expressed protein 5 3 25 11 At5g58050 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to Glycerophosphoryl diester phosphodiesterase precursor (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (ImmunoglobulinD-binding protein) (IGD-binding protein) (SP:Q06282) {Haemophilus influenzae} 5 3 25 12 At5g58110 "expressed protein predicted proteins, Homo sapiens and Drosophila melanogaster" 5 3 25 13 At5g58250 expressed protein 5 3 25 14 At5g58310 "hydrolase, alpha/beta fold family protein low similarity to SP|Q40708 PIR7A protein {Oryza sativa}, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393, ethylene-induced esterase [Citrus sinensis] GI:14279437; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 5 3 25 15 At5g58440 phox (PX) domain-containing protein similar to SP|O60749 Sorting nexin 2 {Homo sapiens}; contains Pfam profile PF00787: PX domain 5 3 25 16 At5g58500 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 5 3 25 17 At5g61090 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains similarity to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; common family members: At4g18570, At3g25690, At4g04980 [Arabidopsis thaliana]" 5 3 25 18 At5g61150 leo1-like family protein weak similarity to SP|P38439 LEO1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04004: Leo1-like protein; supporting cDNA gi|21929714|gb|AF490422.1| 5 3 25 19 At5g61310 "cytochrome c oxidase subunit Vc, putative / COX5C, putative similar to cytochrome c oxidase subunit 5c [Helianthus annuus] GI:18409602; contains Pfam profile PF05799: Cytochrome c oxidase subunit Vc (COX5C)" 5 3 25 20 At5g61350 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 3 25 21 At5g61510 "NADP-dependent oxidoreductase, putative similar to zeta-crystallin homolog TED2 from Zinnia elegans [gi:531096]; contains Pfam zinc-binding dehydrogenase domain PF00107" 5 3 25 22 At5g61540 "L-asparaginase, putative / L-asparagine amidohydrolase, putative similar to Swiss-Prot:O02467 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (Glycosylasparaginase) (Aspartylglucosaminidase)(N4-(N-acetyl-beta- glucosaminyl)-L-asparagine amidase) (AGA)[Spodoptera frugiperda]" 5 3 25 23 At5g61690 "ABC transporter family protein ABC transport protein, Dictyostelium discoideum, PIR:T18288" 5 3 25 24 At5g61750 "cupin family protein similar to germin-like protein from Mesembryanthemum crystallinum, PIR:T12426 [SP|P45852], rhicadhesin receptor precursor (Germin-like protein) from Pisum sativum [SP|Q9S8P4]; contains Pfam profile PF00190: Cupin" 5 3 25 25 At5g64440 amidase family protein low similarity to enantiomerase-selective amidase [Rhodococcus sp.] GI:152052; contains Pfam profile PF01425: Amidase 5 3 26 1 At5g64470 expressed protein similar to unknown protein (gb|AAD15463.1) 5 3 26 2 At5g64630 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] 5 3 26 3 At5g64670 ribosomal protein L15 family protein 5 3 26 4 At5g64813 GTP-binding protein-related contains weak similarity to Ras-related protein Rab-27A (Rab-27) (GTP-binding protein Ram) (Swiss-Prot:P51159) [Homo sapiens] 5 3 26 5 At5g64840 ABC transporter family protein 5 3 26 6 At5g65000 nucleotide-sugar transporter family protein low similarity to SP|Q9Y2D2 UDP N-acetylglucosamine transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 5 3 26 7 At5g65030 expressed protein ; expression supported by MPSS 5 3 26 8 At5g67570 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 3 26 9 At5g67630 "DNA helicase, putative similar to RuvB-like DNA helicase reptin [Danio rerio] GI:27733814, reptin [Drosophila melanogaster] GI:7243682" 5 3 26 10 At3g61030 C2 domain-containing protein similar to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain 5 3 26 11 At5g50665 hypothetical protein 5 3 26 12 ath-MIR164a miRNA gene Arabidopsis thaliana miR164a stem-loop 5 3 26 13 ath-MIR398c miRNA gene Arabidopsis thaliana miR398c stem-loop 5 3 26 14 ath-MIR399a miRNA gene Arabidopsis thaliana miR399a stem-loop 5 3 26 15 ath-MIR156g miRNA gene Arabidopsis thaliana miR156g stem-loop 5 3 26 16 At3g43880 "hypothetical protein p97 homologous protein, Canis familiaris, EMBL:CFA388531" 5 3 26 17 At3g43940 hypothetical protein 5 3 26 18 At3g44115 hypothetical protein 5 3 26 19 At3g44170 hypothetical protein 5 3 26 20 At3g44350 "no apical meristem (NAM) family protein Tobacco elicitor-responsive gene (TERN), NAC-domain protein, Nicotiana tabacum, EMBL:AB021178" 5 3 26 21 At3g44440 hypothetical protein 5 3 26 22 At3g44600 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to SP|P87051 Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8) (Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains Pfam profiles PF00160: peptidyl-prolyl cis-trans isomerase cyclophilin-type, PF00400: WD domain G-beta repeat" 5 3 26 23 At3g44670 "disease resistance protein RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to both RPP1 Ws-A and RPP1 Ws-C" 5 3 26 24 Blank Blank 5 3 26 25 Blank Blank 5 4 1 1 atc03 Randomly generated negative control 5 4 1 2 atc09 Randomly generated negative control 5 4 1 3 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 5 4 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 5 4 1 5 Alien5 Control: Stratagene Spotreport Alien Oligo 5 4 1 6 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 5 4 1 7 atc07 Randomly generated negative control 5 4 1 8 Alien1 Control: Stratagene Spotreport Alien Oligo 5 4 1 9 At1g02830 60S ribosomal protein L22 (RPL22A) similar to ribosomal protein L22 GI:710294 from [Rattus norvegicus] 5 4 1 10 At1g02850 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 5 4 1 11 At1g02960 expressed protein 5 4 1 12 At1g02990 expressed protein similar to mature-parasite-infected erythrocyte surface antigen (GI:160409) {Plasmodium falciparum} 5 4 1 13 At1g03120 seed maturation family protein similar to embryonic cell protein [Daucus carota] GI:18337; contains Pfam profile PF04927: Seed maturation protein 5 4 1 14 At1g03180 hypothetical protein 5 4 1 15 At1g03360 exonuclease family protein similar to Exosome complex exonuclease RRP4 (Ribosomal RNA processing protein 4)(SP:P38792) {Saccharomyces cerevisiae} 5 4 1 16 At1g03420 "expressed protein similar to gb|T45484, emb|Z30724, and emb|Z30531" 5 4 1 17 At1g06080 delta 9 desaturase (ADS1) identical to delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180 GI:2970034 from [Arabidopsis thaliana] 5 4 1 18 At1g06130 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme GB:AAC49865 GI:2570338 from [Arabidopsis thaliana]" 5 4 1 19 At1g06260 "cysteine proteinase, putative contains similarity to thiol-protease, pre-pro-TPE4A protein GI:3688528 [Pisum sativum]" 5 4 1 20 At1g06330 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam heavy-metal-associated domain PF00403 5 4 1 21 At1g06500 expressed protein 5 4 1 22 At1g06560 NOL1/NOP2/sun family protein contains Pfam profile PF01189: NOL1/NOP2/sun family 5 4 1 23 At1g06730 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 5 4 1 24 At1g06780 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 5 4 1 25 At1g09270 "importin alpha-1 subunit, putative (IMPA4) similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 5 4 2 1 At1g09330 expressed protein contains 3 transmembrane domains; contains Pfam profile PF05832: Eukaryotic protein of unknown function 5 4 2 2 At1g09490 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]; Location of EST gb|H37170, gb|H77227 and gb|AA605565" 5 4 2 3 At1g09530 phytochrome interacting factor 3 (PIF3) identical to phytochrome interacting factor 3 (PIF3) GI:3929585 from [Arabidopsis thaliana] 5 4 2 4 At1g09665 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 5 4 2 5 At1g09730 "Ulp1 protease family protein low similarity to SP|Q9GZR1 SUMO-1-specific protease 1 (EC 3.4.22.-) (Sentrin-specific protease SENP6) (Protease FKSG6) {Homo sapiens}; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 5 4 2 6 At1g09870 histidine acid phosphatase family protein contains Pfam profile PF00328: Histidine acid phosphatase; similar to multiple inositol polyphosphate phosphatase (GI:4105496)[Mus musculus]; EST gb|R64758 comes from this gene 5 4 2 7 At1g09930 oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}; contains Pfam profile PF03169: OPT oligopeptide transporter protein 5 4 2 8 At1g12500 "phosphate translocator-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Zea mays] GI:2997589, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P21727|CPTR_PEA Triose phosphate/phosphate translocator, chloroplast precursor (CTPT) {Pisum sativum}" 5 4 2 9 At1g12570 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 5 4 2 10 At1g12760 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|Q9NVW2 RING finger protein 12 (LIM domain interacting RING finger protein) {Homo sapiens}; contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 4 2 11 At1g12810 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 5 4 2 12 At1g12980 "AP2 domain-containing transcription factor, putative / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum and contains PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940" 5 4 2 13 At1g13050 expressed protein 5 4 2 14 At1g13210 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) (Chromaffin granule ATPase) from {Homo sapiens} SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and gb|AA394473 come from this gene" 5 4 2 15 At1g13260 "DNA-binding protein RAV1 (RAV1) identical to SP|Q9ZWM9 DNA-binding protein RAV1 {Arabidopsis thaliana}, RAV1 GI:3868857 from [Arabidopsis thaliana]" 5 4 2 16 At1g15920 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 5 4 2 17 At1g15950 "cinnamoyl-CoA reductase, putative nearly identical to CCR1 (GI:12034897), similar to cinnamoyl CoA reductase GI:2058310 from [Eucalyptus gunnii]" 5 4 2 18 At1g16120 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 5 4 2 19 At1g16180 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 5 4 2 20 At1g16360 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Similar to GI:4585976; GI:11994416; GI:4835763; GI:9757735 from [Arabidopsis thaliana] 5 4 2 21 At1g16410 "cytochrome P450, putative similar to gb|AF069494 cytochrome P450 from Sinapis alba and is a member of the PF|00067 Cytochrome P450 family" 5 4 2 22 At1g16560 Per1-like family protein contains Pfam profile PF04080: Per1-like 5 4 2 23 At1g16630 expressed protein 5 4 2 24 At1g19410 hypothetical protein 5 4 2 25 At1g19480 HhH-GPD base excision DNA repair family protein contains Pfam PF00730: HhH-GPD superfamily base excision DNA repair; similar to DNA-3-methyladenine glycosylase 1 (3-methyladenine DNA glycosidase 1) (3MEA DNA glycosylase 1) (SP:Q92383) {Schizosaccharomyces pombe} 5 4 3 1 At1g19660 wound-responsive family protein similar to wound inducive gene (GI:8096273)[Nicotiana tabacum] 5 4 3 2 At1g19715 jacalin lectin family protein similar to agglutinin [Castanea crenata] GI:25528883; contains Pfam profile PF01419: Jacalin-like lectin domain 5 4 3 3 At1g19910 "vacuolar ATP synthase 16 kDa proteolipid subunit 2 / V-ATPase 16 kDa proteolipid subunit 2 (AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis thaliana}, nearly identical to vacuolar H+-ATPase proteolipid (16 kDa) subunit GI:755147 from [Gossypium hirsutum]" 5 4 3 4 At1g19970 ER lumen protein retaining receptor family protein similar to SP|P33946 ER lumen protein retaining receptor 1 (KDEL receptor 1) {Bos taurus}; contains Pfam profile PF00810: ER lumen protein retaining receptor 5 4 3 5 At1g20160 subtilase family protein similar to subtilisin-type protease precursor GI:14150446 from [Glycine max] 5 4 3 6 At1g20230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 3 7 At1g22950 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 5 4 3 8 At1g23000 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains PF00403 Heavy-metal-associated domain 5 4 3 9 At1g23140 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 5 4 3 10 At1g23200 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 5 4 3 11 At1g23350 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 5 4 3 12 At1g23380 "homeobox transcription factor (KNAT6) nearly identical to homeodomain transcription factor KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana], homeodomain transcription factor KNAT6 (KNAT6S) [Arabidopsis thaliana] GI:15991300" 5 4 3 13 At1g23520 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 5 4 3 14 At1g23580 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 5 4 3 15 At1g27300 expressed protein 5 4 3 16 At1g27360 squamosa promoter-binding protein-like 11 (SPL11) identical to squamosa promoter binding protein-like 11 [Arabidopsis thaliana] GI:5931665; contains Pfam profile PF03110: SBP domain 5 4 3 17 At1g27460 calmodulin-binding protein similar to calmodulin-binding protein MPCBP [Zea mays] GI:10086260; contains Pfam profile PF00515: TPR Domain 5 4 3 18 At1g27520 "glycoside hydrolase family 47 protein Similar to gb|U04299 mannosyl-oligosaccharide alpha-1,2-mannosidase from Mus musculus. ESTs gb|R84145 and gb|AA394707 come from this gene" 5 4 3 19 At1g27680 glucose-1-phosphate adenylyltransferase large subunit 2 (APL2) / ADP-glucose pyrophosphorylase identical to SP|P55230 5 4 3 20 At1g27730 "zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) identical to salt-tolerance zinc finger protein GB:CAA64820 GI:1565227 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA zinc finger protein STZ/ZAT10 (STZ/ZAT10) GI:9965730" 5 4 3 21 At1g27900 "RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 5 4 3 22 At1g27960 expressed protein contains Pfam profile PF04146: YT521-B-like family 5 4 3 23 At1g30860 expressed protein 5 4 3 24 At1g30920 F-box family protein contains F-box domain Pfam:PF00646 5 4 3 25 At1g31140 MADS-box protein (AGL63) similar to gb|Y15008 M79 protein (MADS box) from oryza sativa and contains SRF transcription factor domain PF|00319 5 4 4 1 At1g31180 "3-isopropylmalate dehydrogenase, chloroplast, putative strong similarity to SP|P29102 3-isopropylmalate dehydrogenase, chloroplast precursor {Brassica napus}; EST gb|F14478 comes from this gene" 5 4 4 2 At1g31360 "DNA helicase, putative (RECQl2) nearly identical to DNA Helicase [Arabidopsis thaliana] GI:11121445" 5 4 4 3 At1g31420 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profile: PF00069: Eukaryotic protein kinase domain" 5 4 4 4 At1g31630 MADS-box family protein similar to MADS-box protein NMH 7 GI:2827300 from [Medicago sativa] 5 4 4 5 At1g31690 "copper amine oxidase, putative similar to copper amine oxidase [Lens culinaris] gi|15451834|gb|AAB34918" 5 4 4 6 At1g34750 "protein phosphatase 2C, putative / PP2C, putative similar to GB:AAD17805 from (Lotus japonicus) (Proc. Natl. Acad. Sci. U.S.A. 96 (4), 1738-1743 (1999))" 5 4 4 7 At1g34790 "transparent testa 1 protein (TT1) / zinc finger (C2H2 type) protein TT1 identical to transparent testa 1 GI:18253279 from [Arabidopsis thaliana]; contains Pfam profile PF00096: Zinc finger, C2H2 type" 5 4 4 8 At1g35240 "transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02309 AUX/IAA family, PF02362: B3 DNA binding domain" 5 4 4 9 At1g35330 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 5 4 4 10 At1g35520 transcriptional factor B3 family protein contains Pfam profile: PF02362 B3 DNA binding domain 5 4 4 11 At1g35580 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 5 4 4 12 At1g35780 expressed protein 5 4 4 13 At1g35890 hypothetical protein 5 4 4 14 At1g47470 hypothetical protein 5 4 4 15 At1g47500 "RNA-binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nicotiana tabacum]" 5 4 4 16 At1g47680 hypothetical protein 5 4 4 17 At1g47750 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) 5 4 4 18 At1g47890 "disease resistance family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 5 4 4 19 At1g47970 expressed protein 5 4 4 20 At1g48130 "peroxiredoxin (PER1) / rehydrin, putative identical to peroxiredoxin (Rehydrin homolog) [Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 5 4 4 21 At1g48175 deaminase-related similar to tRNA-specific adenosine deaminase 2 (EC 3.5.4.-) (tRNA-specific adenosine-34 deaminase subunit TAD2) (Swiss-Prot:P47058) [Saccharomyces cerevisiae] 5 4 4 22 At1g51240 hypothetical protein similar to hypothetical protein GB:AAD30637 5 4 4 23 At1g51300 acyl-protein thioesterase-related contains similarity to acyl-protein thioesterase-1 [Homo sapiens] gi|9965372|gb|AAG10063 5 4 4 24 At1g51440 "lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706, lipase [Dianthus caryophyllus] GI:4103627; contains Pfam profile PF01764: Lipase" 5 4 4 25 At1g51500 ABC transporter family protein similar to GB:AAF61569 from [Bombyx mori] 5 4 5 1 At1g51640 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit contains Pfam domain PF03081: Exo70 exocyst complex subunit; 5 4 5 2 At1g51680 4-coumarate--CoA ligase 1 / 4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana} 5 4 5 3 At1g51830 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase GI:1321686 from [Arabidopsis thaliana]" 5 4 5 4 At1g51890 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 5 4 5 5 At1g54510 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 5 4 5 6 At1g54570 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 5 4 5 7 At1g54740 expressed protein 5 4 5 8 At1g54790 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 5 4 5 9 At1g54955 hypothetical protein 5 4 5 10 At1g55010 "plant defensin-fusion protein, putative (PDF1.5) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 4 [Raphanus sativus] gi|1655683|emb|CAA65983" 5 4 5 11 At1g55200 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 5 4 5 12 At1g55255 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 4 5 13 At1g59722 hypothetical protein 5 4 5 14 At1g59760 "ATP-dependent RNA helicase, putative similar to SP|P47047 ATP-dependent RNA helicase DOB1 {Saccharomyces cerevisiae}, HUA enhancer 2 [Arabidopsis thaliana] GI:16024936; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 5 4 5 15 At1g59890 paired amphipathic helix repeat-containing protein similar to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 5 4 5 16 At1g59950 "aldo/keto reductase, putative similar to NADPH-dependent codeinone reductase GI:6478210 [Papaver somniferum], NAD(P)H dependent 6'-deoxychalcone synthase [Glycine max][GI:18728]" 5 4 5 17 At1g60130 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 5 4 5 18 At1g60200 "splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF01480: PWI domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 5 4 5 19 At1g60440 eukaryotic pantothenate kinase family protein similar to pantothenate kinase GI:4191500 from [Aspergillus nidulans]; contains Pfam profile PF03630: Fumble 5 4 5 20 At1g60530 dynamin family protein similar to mx2 protein GI:5578742 from [Mus musculus musculus]; contains Pfam profile PF00350: Dynamin family 5 4 5 21 At1g63330 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 5 22 At1g63390 flavin-containing monooxygenase-related / FMO-related low similarity to flavin-containing monooxygenase (FMO3) from Mus musculus [SP|P97501] 5 4 5 23 At1g63580 protein kinase-related 5 4 5 24 At1g63630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 5 25 At1g63770 peptidase M1 family protein similar to SP|P04825 Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) {Escherichia coli}; contains Pfam profile PF01433: Peptidase family M1 5 4 6 1 At1g63820 hypothetical protein 5 4 6 2 At1g63960 hypothetical protein 5 4 6 3 At1g64000 WRKY family transcription factor similar to WRKY DNA binding protein GB:CAB97004 from [Solanum tuberosum] 5 4 6 4 At1g66800 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase [Eucalyptus gunnii] GI:1143445, CPRD14 protein, Vigna unguiculata [gi:1854445]" 5 4 6 5 At1g66860 expressed protein similar to Hypothetical protein RP404. (Swiss-Prot:Q9ZDC7) [Rickettsia prowazekii]; similar to Hypothetical protein yvdE homolog (Fragment) (Swiss-Prot:P22347) [Lactococcus lactis] 5 4 6 6 At1g67030 "zinc finger (C2H2 type) family protein (ZFP6) identical to zinc finger protein, ZFP6 gi|790683|gb|AAA87302; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 4 6 7 At1g67080 expressed protein 5 4 6 8 At1g67250 proteasome maturation factor UMP1 family protein contains Pfam profile PF05348: Proteasome maturation factor UMP1 5 4 6 9 At1g67300 "hexose transporter, putative similar to hexose transporters from Solanum tuberosum [GI:8347246], Nicotiana tabacum [GI:8347244], Arabidopsis thaliana [GI:8347250]; contains Pfam profile PF00083: major facilitator superfamily protein" 5 4 6 10 At1g67470 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 4 6 11 At1g67530 "armadillo/beta-catenin repeat family protein / U-box domain-containing family protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 5 4 6 12 At1g70170 matrixin family protein similar to SP|P29136 Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) {Glycine max}; contains InterPro accession IPR001818: Matrixin 5 4 6 13 At1g70210 cyclin delta-1 (CYCD1) nearly identical to SP|P42751 Cyclin delta-1 {Arabidopsis thaliana} 5 4 6 14 At1g70400 hypothetical protein similar to U4/U6 snRNP-associated 61 kDa protein [Homo sapiens] GI:18249847 5 4 6 15 At1g70440 hypothetical protein 5 4 6 16 At1g70580 "glutamate:glyoxylate aminotransferase 2 (GGT2) identical to glutamate:glyoxylate aminotransferase 2 [Arabidopsis thaliana] GI:24461829; similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GI:4730884 from Oryza sativa; contains Pfam profile PF00155: aminotransferase, classes I and II" 5 4 6 17 At1g70620 cyclin-related contains weak similarity to Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I) [Bos taurus] 5 4 6 18 At1g70790 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 5 4 6 19 At1g70830 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 5 4 6 20 At1g73650 expressed protein 5 4 6 21 At1g73700 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 5 4 6 22 At1g73870 zinc finger (B-box type) family protein 5 4 6 23 At1g73920 lipase family protein similar to lipase GB:CAA74737 [SP|O46108] from [Drosophila melanogaster] 5 4 6 24 At1g74070 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 5 4 6 25 At1g74130 rhomboid family protein contains Pfam profile PF01694: Rhomboid family 5 4 7 1 At1g74310 heat shock protein 101 (HSP101) identical to heat shock protein 101 GI:6715468 GB:AAF26423 from [Arabidopsis thaliana] 5 4 7 2 At1g74360 "leucine-rich repeat transmembrane protein kinase, putative similar to brassinosteroid insensitive 1 GB:AAC49810 (putative receptor protein kinase); contains Pfam profiles: PF00560 Leucine Rich Repeat (17 repeats), PF00069 Eukaryotic protein kinase domain" 5 4 7 3 AT5G57480 PC-1 D08 5 4 7 4 3XSSC PC-1 D20 5 4 7 5 AT1G29930 PC-1 H08 5 4 7 6 3XSSC PC-1 H20 5 4 7 7 AT3G44150 PC-1 L08 5 4 7 8 3XSSC PC-1 L20 5 4 7 9 AT4G00810 PC-1 P08 5 4 7 10 3XSSC PC-1 P20 5 4 7 11 At1g77122 expressed protein 5 4 7 12 At1g77170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 7 13 At1g77360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 7 14 At1g77410 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase SP:P45582 from [Asparagus officinalis]" 5 4 7 15 At1g77590 "long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS9) similar to LACS 3 [SP|O95573] from Homo Sapiens, LACS 3 [SP|Q63151] from Rattus norvegicus; contains Pfam HMM hit: AMP-binding enzymes PF00501" 5 4 7 16 At1g77650 F-box family protein contains F-box domain Pfam:PF00646 5 4 7 17 At1g77790 "glycosyl hydrolase family 17 protein similar to endo-1,3-beta-glucanase GB:BAA21110 [Gossypium hirsutum]" 5 4 7 18 At1g77830 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 4 7 19 At1g80400 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|Q90972 RING finger protein 13 {Gallus gallus}; contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 4 7 20 At1g80450 VQ motif-containing protein contains PF05678: VQ motif 5 4 7 21 At1g80630 leucine-rich repeat family protein 5 4 7 22 At1g80690 expressed protein 5 4 7 23 At1g80860 expressed protein 5 4 7 24 At1g80900 "magnesium transporter CorA-like family protein (MGT1) (MRS2) low similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 5 4 7 25 At2g01090 "ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative similar to SP|P48504 Ubiquinol-cytochrome C reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7) {Solanum tuberosum}; contains Pfam profile PF02320: Ubiquinol-cytochrome C reductase hinge protein" 5 4 8 1 At2g01130 "helicase domain-containing protein similar to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 5 4 8 2 At2g04050 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 5 4 8 3 At2g04090 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 5 4 8 4 At2g04350 "long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8) similar to LACS 4 [SP|O35547] from Rattus norvegicus, LACS 4 [SP|O60488] from Homo sapiens; contains Pfam HMM hit: AMP-binding enzymes PF00501" 5 4 8 5 At2g04400 indole-3-glycerol phosphate synthase (IGPS) nearly identical to SP|P49572 5 4 8 6 At2g04560 "glycotransferase family protein 19 low similarity to lipid-A-disaccharide synthase from Haemophilus influenzae [gi:1694783] and Escherichia coli [SP|P10441]; contains InterPro IPR003835: Glycosyl transferase, family 19" 5 4 8 7 At2g04650 ADP-glucose pyrophosphorylase family protein contains Pfam profile PF00483: Nucleotidyl transferase; low similarity to mannose-1-phosphate guanylyltransferase [Hypocrea jecorina] GI:3323397 5 4 8 8 At2g04850 auxin-responsive protein-related related to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana] 5 4 8 9 At2g04900 expressed protein 5 4 8 10 At2g12130 hypothetical protein 5 4 8 11 At2g12290 hypothetical protein 5 4 8 12 At2g12940 expressed protein 5 4 8 13 At2g13150 expressed protein contains a bZIP transcription factor basic domain signature (PDOC00036) 5 4 8 14 At2g13600 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 5 4 8 15 At2g13650 GDP-mannose transporter (GONST1) identical to GDP-mannose transporter SP:Q941R4 from [Arabidopsis thaliana] 5 4 8 16 At2g13950 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 4 8 17 At2g14020 hypothetical protein 5 4 8 18 At2g17240 expressed protein 5 4 8 19 At2g17290 "calcium-dependent protein kinase isoform 6 (CPK6) identical to calmodulin-domain protein kinase CDPK isoform 6 [Arabidopsis thaliana] gi|1399275|gb|AAB03246; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 5 4 8 20 At2g17500 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 5 4 8 21 At2g17550 expressed protein 5 4 8 22 At2g17710 expressed protein 5 4 8 23 At2g17770 "ABA-responsive element binding protein, putative similar to ABA response element binding factor [Triticum aestivum] gi|21693583|gb|AAM75354" 5 4 8 24 At2g17940 expressed protein contains Pfam PF05701: Plant protein of unknown function (DUF827) 5 4 8 25 At2g17980 "sec1 family protein similar to SWISS-PROT:P22213 SLY1 protein [Saccharomyces cerevisiae]; contains Pfam domain, PF00995: Sec1 family" 5 4 9 1 At2g20710 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 5 4 9 2 At2g20750 "beta-expansin, putative (EXPB1) identical to beta-expansin [Arabidopsis thaliana] gi|2224913|gb|AAB61709; similar to SP:O04701 major pollen allergen, Bermuda grass [Cynodon dactylon]; beta-expansin gene family, PMID:11641069" 5 4 9 3 At2g20850 "leucine-rich repeat protein kinase, putative contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain" 5 4 9 4 At2g20900 "diacylglycerol kinase, putative contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 5 4 9 5 At2g21060 cold-shock DNA-binding family protein / glycine-rich protein (GRP2) identical to Glycine-rich protein 2b (AtGRP2b) [Arabidopsis thaliana] SWISS-PROT:Q38896; contains Pfam domains PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle 5 4 9 6 At2g21120 expressed protein 5 4 9 7 At2g21240 expressed protein 5 4 9 8 At2g21290 expressed protein 5 4 9 9 At2g24180 cytochrome P450 family protein 5 4 9 10 At2g24240 potassium channel tetramerisation domain-containing protein contains Pfam profile PF02214: K+ channel tetramerisation domain 5 4 9 11 At2g24400 "auxin-responsive protein, putative / small auxin up RNA (SAUR_D) similar to SAUR-AC-like protein (small auxin up RNA) (GI:4455308) from [Arabidopsis thaliana]; auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesnerian]" 5 4 9 12 At2g24460 expressed protein 5 4 9 13 At2g24620 S-locus glycoprotein family protein contains Pfam profile: PF00954 S-locus glycoprotein family 5 4 9 14 At2g24690 transcriptional factor B3 family protein low similarity to reproductive meristem protein 1 [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain 5 4 9 15 At2g24870 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 5 4 9 16 At2g24930 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 5 4 9 17 At2g27630 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 5 4 9 18 At2g27700 "eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|P39730 Translation initiation factor IF-2 {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2" 5 4 9 19 At2g27810 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 5 4 9 20 At2g27870 hypothetical protein 5 4 9 21 At2g28056 expressed protein 5 4 9 22 At2g28100 "glycosyl hydrolase family 29 / alpha-L-fucosidase, putative similar to alpha-L-fucosidase SP:P10901 from [Dictyostelium discoideum]" 5 4 9 23 At2g28270 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 5 4 9 24 At2g28310 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 5 4 9 25 At2g31040 ATP synthase protein I -related contains weaks similarity to Swiss-Prot:P08443 ATP synthase protein I [Synechococcus sp.] 5 4 10 1 At2g31083 Clavata3 / ESR-Related-5 (CLE5) CLAVATA3/ESR-Related 5 (CLE5) 5 4 10 2 At2g31240 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 5 4 10 3 At2g31300 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); identical to putative ARP2/3 protein complex subunit p41 (GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3 complex 41 kDa subunit (P41-ARC) (Actin-related protein 2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus] 5 4 10 4 At2g31440 expressed protein identical to cDNA endonuclease III homologue (nth1 gene) GI:11181951 5 4 10 5 At2g31500 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 5 4 10 6 At2g31670 expressed protein similar to NADH-ubiquinone oxidoreductase B16.6 subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (Cell death-regulatory protein GRIM-19) (Swiss-Prot:Q95KV7) [Bos taurus] 5 4 10 7 At2g31725 expressed protein 5 4 10 8 At2g34310 expressed protein 5 4 10 9 At2g34340 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 5 4 10 10 At2g34460 flavin reductase-related low similarity to SP|P30043 Flavin reductase {Homo sapiens} 5 4 10 11 At2g34520 ribosomal protein S14 mitochondrial family protein identical to ribosomal protein S14 {Arabidopsis thaliana} NCBI_gi:4583554 5 4 10 12 At2g34660 glutathione S-conjugate ABC transporter (MRP2) almost identical to MgATP-energized glutathione S-conjugate pump GI:2909781 from [Arabidopsis thaliana] 5 4 10 13 At2g34720 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 5 4 10 14 At2g34900 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 5 4 10 15 At2g34970 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein similar to SP|Q64350 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Rattus norvegicus}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 5 4 10 16 At2g37550 arabidopsis pde1 suppressor 1 protein (ASP1) identical to arabidopsis pde1 suppressor 1 (Asp1) from GI:4519792 [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 5 4 10 17 At2g37585 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 5 4 10 18 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 5 4 10 19 At2g37790 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 5 4 10 20 At2g37960 expressed protein 5 4 10 21 At2g38010 "ceramidase family protein contains Pfam domain, PF04734: Neutral/alkaline nonlysosomal ceramidase" 5 4 10 22 At2g38170 "calcium exchanger (CAX1) identical to high affinity calcium antiporter CAX1 [Arabidopsis thaliana] gi|9256741|gb|AAB05913, except a possible frameshift at base 58008. Sequence has been confirmed with 5 sequencing reads.; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 5 4 10 23 At2g38210 "ethylene-responsive protein, putative very strong similarity to ethylene-inducible protein HEVER SP:Q39963 from [Hevea brasiliensis]" 5 4 10 24 At2g40765 expressed protein 5 4 10 25 At2g40810 "WD-40 repeat protein family similar to Gsa12p(GI:18307769)[Pichia pastoris]; contains 3 Pfam PF00400: WD domain, G-beta repeats" 5 4 11 1 At2g40935 "expressed protein low similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 5 4 11 2 At2g40980 expressed protein 5 4 11 3 At2g41150 expressed protein an isoform contains a GA donor splice site supported by FL-cDNA alignment which truncates the ORF. 5 4 11 4 At2g41200 expressed protein 5 4 11 5 At2g41380 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 5 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 5 4 11 7 At2g43980 "inositol 1,3,4-trisphosphate 5/6-kinase family protein contains Pfam profile PF05770: Inositol 1, 3, 4-trisphosphate 5/6-kinase; contains Prosite PS00591: Glycosyl hydrolases family 10 active site; similar to inositol 1,3,4-trisphosphate 5/6-kinase (GI:1322038) [Homo sapiens]" 5 4 11 8 At2g44040 "dihydrodipicolinate reductase family protein weak similarity to SP|Q52419 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR) {Pseudomonas syringae} ; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 5 4 11 9 At2g44175 N-myristoyltransferase-related similar to N-myristoyltransferase 1 GI:7339834 from [Arabidopsis thaliana] 5 4 11 10 At2g44220 expressed protein and genefinder contains Pfam profile PF03080: Arabidopsis proteins of unknown function 5 4 11 11 At2g44400 DC1 domain-containing protein similar to GP|2435515|AF024504 5 4 11 12 At2g44460 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis thaliana] 5 4 11 13 At2g44600 expressed protein 5 4 11 14 At2g44660 "ALG6, ALG8 glycosyltransferase family protein similar to SP|P40351 Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF03155: ALG6, ALG8 glycosyltransferase family" 5 4 11 15 At2g47340 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 5 4 11 16 At2g47390 expressed protein 5 4 11 17 At2g47540 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 5 4 11 18 At2g47600 magnesium/proton exchanger (MHX1) identical to magnesium/proton exchanger AtMHX [Arabidopsis thaliana] gi|6492237|gb|AAF14229; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563 5 4 11 19 At2g47770 benzodiazepine receptor-related contains weak similarity to Peripheral-type benzodiazepine receptor (PBR) (PKBS) (Mitochondrial benzodiazepine receptor) (Swiss-Prot:P30536) [Homo sapiens] 5 4 11 20 At2g47830 "cation efflux family protein / metal tolerance protein, putative (MTPc1) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 5 4 11 21 At2g47950 expressed protein 5 4 11 22 At2g47990 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina}; contains 5 WD-40 repeats (PF00400); similar to beta transducin-like protein HET-E2C*4 (GP:17225206)[Podospora anserina] 5 4 11 23 At3g03320 expressed protein similar to hypothetical protein GB:BAA29429 [Pyrococcus horikoshii] 5 4 11 24 At3g03380 "DegP protease, putative contains similarity to degP GI:2623992 from [Bradyrhizobium japonicum]" 5 4 11 25 At3g03560 expressed protein 5 4 12 1 At3g03620 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296 5 4 12 2 At3g03776 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965;" 5 4 12 3 At3g03830 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 5 4 12 4 At3g03960 "chaperonin, putative similar to SWISS-PROT:P42932- T-complex protein 1, theta subunit (TCP-1-theta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 5 4 12 5 At3g04000 "short-chain dehydrogenase/reductase (SDR) family protein similar to SP|Q08632 Short-chain type dehydrogenase/reductase (EC 1.-.-.-) {Picea abies}; contains Pfam:PF00106 oxidoreductase, short chain dehydrogenase/reductase family" 5 4 12 6 At3g06540 GDP dissociation inhibitor family protein / Rab GTPase activator family protein similar to SP|P26374 Rab proteins geranylgeranyltransferase component A 2 (Rab escort protein 2) {Homo sapiens}; contains Pfam profile PF00996: GDP dissociation inhibitor 5 4 12 7 At3g06580 galactokinase (GAL1) identical to galactokinase (Galactose kinase) [Arabidopsis thaliana] SWISS-PROT:Q9SEE5 5 4 12 8 At3g06660 "PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam domains, PF04795: PAPA-1-like conserved region and PF04438: HIT zinc finger" 5 4 12 9 At3g06720 "importin alpha-1 subunit, putative (IMPA1) similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 5 4 12 10 At3g06895 expressed protein 5 4 12 11 At3g06950 tRNA pseudouridine synthase family protein similar to SP|P07649 tRNA pseudouridine synthase A (EC 4.2.1.70) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF01416: tRNA pseudouridine synthase 5 4 12 12 At3g07110 60S ribosomal protein L13A (RPL13aA) similar to ribosomal protein L13A GB:O49885 [Lupinus luteus] 5 4 12 13 At3g07170 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 5 4 12 14 At3g10200 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 5 4 12 15 At3g10250 expressed protein 5 4 12 16 At3g10390 amine oxidase family protein / SWIRM domain-containing protein contains Pfam profile: PF01593 Flavin containing amine oxidase 5 4 12 17 At3g10430 F-box family protein contains F-box domain Pfam:PF00646 5 4 12 18 At3g10570 "cytochrome P450, putative similar to cytochrome P450 77A3 GB:O48928 [Glycine max]" 5 4 12 19 At3g10600 amino acid permease family protein similar to SP|Q09143 High-affinity cationic amino acid transporter-1 (CAT-1) {Mus musculus}; contains Pfam profile PF00324: Amino acid permease 5 4 12 20 At3g10740 glycosyl hydrolase family protein 51 similar to arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II from GI:13398414 [Hordeum vulgare] 5 4 12 21 At3g10780 emp24/gp25L/p24 family protein similar to SP|O35587 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Mesocricetus auratus}; contains Pfam profile: PF01105 emp24/gp25L/p24 family; contains non-consensus TG acceptor splice site at exon 3 5 4 12 22 At3g13222 expressed protein 5 4 12 23 At3g13229 hypothetical protein 5 4 12 24 At3g13380 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 5 4 12 25 At3g13435 expressed protein 5 4 13 1 At3g13580 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] 5 4 13 2 At3g13640 "RNase L inhibitor protein, putative similar to 68 kDa protein HP68 GI:16755057 from [Triticum aestivum]" 5 4 13 3 At3g13750 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 5 4 13 4 At3g13784 "beta-fructosidase, putative / beta-fructofuranosidase, putative / cell wall invertase, putative similar to beta-fructofuranosidase GI:402740 from [Arabidopsis thaliana]" 5 4 13 5 At3g16280 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana]; contains Pfam profile: PF00847 AP2 domain" 5 4 13 6 At3g16340 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza]; contains Pfam profile: PF00005 ABC transporter 5 4 13 7 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 5 4 13 8 At3g16550 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 5 4 13 9 At3g16710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 13 10 At3g16760 tetratricopeptide repeat (TPR)-containing protein low similarity to TPR-containing protein involved in spermatogenesis TPIS [Mus musculus] GI:6272682; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain 5 4 13 11 At3g16900 hypothetical protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 5 4 13 12 At3g16960 hypothetical protein 5 4 13 13 At3g19570 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 5 4 13 14 At3g19630 radical SAM domain-containing protein similar to florfenicol resistance protein [Staphylococcus sciuri] GI:9909980; contains Pfam profile PF04055: radical SAM domain protein 5 4 13 15 At3g19810 "expressed protein contains Pfam PF02620: Uncharacterized ACR, COG1399" 5 4 13 16 At3g19870 expressed protein 5 4 13 17 At3g20030 F-box family protein contains F-box domain Pfam:PF00646 5 4 13 18 At3g20070 expressed protein 5 4 13 19 At3g20230 50S ribosomal protein L18 family similar to ribosomal protein L18 (GI:29342325) [Enterococcus faecalis V583]; similar to 50S ribosomal protein L18 (Swiss-Prot:O24704) [Synechococcus sp.] 5 4 13 20 At3g20280 PHD finger family protein contains Pfam profile: PF00628 PHD-finger 5 4 13 21 At3g23000 CBL-interacting protein kinase 7 (CIPK7) identical to CBL-interacting protein kinase 7 [Arabidopsis thaliana] gi|13249113|gb|AAK16682; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 7 (CIPK7) GI:13249112 5 4 13 22 At3g23050 auxin-responsive protein / indoleacetic acid-induced protein 7 (IAA7) identical to SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7) 5 4 13 23 At3g23200 expressed protein 5 4 13 24 At3g23250 myb family transcription factor (MYB15) similar to myb-related transcription factor GB:CAA66952 from [Lycopersicon esculentum] 5 4 13 25 At3g23400 plastid-lipid associated protein PAP / fibrillin family protein contains Pfam profile PF04755: PAP_fibrillin 5 4 14 1 At3g23470 cyclopropane-fatty-acyl-phospholipid synthase family protein similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profile PF02353: Cyclopropane-fatty-acyl-phospholipid synthase 5 4 14 2 At3g23660 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 5 4 14 3 At3g23710 "chloroplast inner membrane import protein Tic22, putative similar to Tic22 [Pisum sativum] gi|3769671|gb|AAC64606; contains Pfam domain PF04278: Tic22-like family" 5 4 14 4 At3g26520 "tonoplast intrinsic protein, putative similar to tonoplast intrinsic protein GI:5081419 from [Brassica napus]" 5 4 14 5 At3g26590 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 5 4 14 6 At3g26690 "MutT/nudix family protein similar to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 5 4 14 7 At3g26744 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 4 14 8 At3g26890 expressed protein 5 4 14 9 At3g26932 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 5 4 14 10 At3g27100 expressed protein 5 4 14 11 At3g27160 ribosomal protein S21 family protein contains Pfam profile: PF01165 ribosomal protein S21 5 4 14 12 At3g30260 "MADS-box protein (AGL79) similar to GB:Q38876 from [Arabidopsis thaliana] (Plant Cell 7 (11), 1763-1771 (1995)); contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain)" 5 4 14 13 At3g30340 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 5 4 14 14 At3g30540 (1-4)-beta-mannan endohydrolase family similar to (1-4)-beta-mannan endohydrolase GI:10178872 from [Coffea arabica] 5 4 14 15 At3g30610 hypothetical protein 5 4 14 16 At3g30810 hypothetical protein 5 4 14 17 At3g30843 hypothetical protein 5 4 14 18 At3g31930 hypothetical protein 5 4 14 19 At3g31990 hypothetical protein similar to putative replication protein A1 GB:AAD32756 from [Arabidopsis thaliana] 5 4 14 20 At3g44790 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 4 14 21 At3g44840 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 5 4 14 22 At3g45010 "serine carboxypeptidase III, putative similar to serine carboxypeptidase III from Oryza sativa SP|P37891, Matricaria chamomilla GI:6960455, Hordeum vulgare SP|P21529, Triticum aestivum SP|P11515; contains Pfam profile PF0450 serine carboxypeptidase" 5 4 14 23 At3g45060 "high-affinity nitrate transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 5 4 14 24 At3g45220 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 5 4 14 25 At3g45300 isovaleryl-CoA-dehydrogenase (IVD) identical to isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana] GI:5596622 5 4 15 1 At3g45480 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 5 4 15 2 At3g45540 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature" 5 4 15 3 At3g48350 "cysteine proteinase, putative similar to cysteine endopeptidase precursor [Ricinus communis] GI:2944446; contains Pfam profile PF00112: Papain family cysteine protease" 5 4 15 4 At3g48420 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P95649 CbbY protein {Rhodobacter sphaeroides}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 5 4 15 5 At3g48590 "CCAAT-box binding transcription factor Hap5a, putative " 5 4 15 6 At3g48660 hypothetical protein 5 4 15 7 At3g48830 "polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein similar to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profiles PF01743: polyA polymerase family protein, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 5 4 15 8 At3g48870 ATP-dependent Clp protease ATP-binding subunit (ClpC) identical to AtClpC GI:5360574 from [Arabidopsis thaliana]; contains Pfam profiles PF02861: Clp amino terminal domain and PF02151: UvrB/uvrC motif 5 4 15 9 At3g49040 F-box family protein contains F-box domain Pfam:PF00646 5 4 15 10 At3g49100 "signal recognition particle 9 kDa protein, putative / SRP9, putative similar to SP|P49458 Signal recognition particle 9 kDa protein (SRP9) {Homo sapiens}; contains Pfam PF05486: Signal recognition particle 9 kDa protein (SRP9)" 5 4 15 11 At3g51940 expressed protein 5 4 15 12 At3g51980 expressed protein 5 4 15 13 At3g52110 expressed protein 5 4 15 14 At3g52155 expressed protein 5 4 15 15 At3g52310 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter 5 4 15 16 At3g52360 expressed protein 5 4 15 17 At3g52530 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 5 4 15 18 At3g52570 expressed protein contains Interpro entry IPR000379 5 4 15 19 At3g55100 "ABC transporter family protein ATP-binding cassette-sub-family G-member 2, Mus musculus, EMBL:AF140218" 5 4 15 20 At3g55140 pectate lyase family protein similar to pollen allergen Amb a 1.3 SP:P27761 from [Ambrosia artemisiifolia] 5 4 15 21 At3g55340 "RNA recognition motif (RRM)-containing protein low similarity to nucleolar phosphoprotein (Nopp52), Tetrahymena thermophila, EMBL:TT51555; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 4 15 22 At3g55380 "ubiquitin-conjugating enzyme 14 (UBC14) E2; UbcAT3; identical to gi:2129757, S46656" 5 4 15 23 At3g55570 "hypothetical protein predicted protein, Arabidopsis thaliana" 5 4 15 24 At3g55620 "eukaryotic translation initiation factor 6, putative / eIF-6, putative similar to SP|O55135 Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) {Mus musculus}; contains Pfam profile PF01912: eIF-6 family" 5 4 15 25 At3g55780 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]" 5 4 16 1 At3g55840 expressed protein 5 4 16 2 At3g58710 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 5 4 16 3 At3g58760 "ankyrin protein kinase, putative similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674" 5 4 16 4 At3g58940 F-box family protein contains F-box domain Pfam:PF00646 5 4 16 5 At3g59000 F-box family protein contains F-box domain Pfam:PF00646 5 4 16 6 At3g59150 F-box family protein contains F-box domain Pfam:PF00646 5 4 16 7 At3g59210 F-box family protein contains F-box domain Pfam:PF00646 5 4 16 8 At3g59360 nucleotide-sugar transporter family protein low similarity to SP|P78382 CMP-sialic acid transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 5 4 16 9 At3g59390 "expressed protein protein CG15643 - Drosophila melanogaster, EMBL:AE003499" 5 4 16 10 At3g62080 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 5 4 16 11 At3g62140 expressed protein ; expression supported by MPSS 5 4 16 12 At3g62320 hypothetical protein 5 4 16 13 At3g62380 hypothetical protein weak similarity to S locus F-box (SLF)-S2 protein [Antirrhinum hispanicum] GI:13161526 5 4 16 14 At3g62550 universal stress protein (USP) family protein similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family 5 4 16 15 At3g62610 myb family transcription factor similar to myb-like transcription factor GI:168590 from [Zea mays] 5 4 16 16 At3g62770 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); putative proteins - different species 5 4 16 17 At3g62810 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 5 4 16 18 At4g01680 myb family transcription factor (MYB55) 5 4 16 19 At4g01730 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 5 4 16 20 At4g01895 systemic acquired resistance (SAR) regulator protein NIMIN-1-related contains similarity to NIMIN-1 protein GI:12057154 from [Arabidopsis thaliana] 5 4 16 21 At4g01920 DC1 domain-containing protein similar to A. thaliana CHP-rich proteins 5 4 16 22 At4g02060 prolifera protein (PRL) / DNA replication licensing factor Mcm7 (MCM7) identical to DNA replication licensing factor Mcm7 SP|P43299 PROLIFERA protein {Arabidopsis thaliana}; contains Pfam profile PF00493: MCM2/3/5 family 5 4 16 23 At4g02110 "BRCT domain-containing protein contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 5 4 16 24 At4g02250 "invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 5 4 16 25 At4g02310 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; 5 4 17 1 At4g05250 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 5 4 17 2 At4g05303 hypothetical protein 5 4 17 3 At4g05490 F-box family protein (FBL22) contains similarity to N7 protein GI:3273101 from [Medicago truncatula] 5 4 17 4 At4g05553 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 5 4 17 5 At4g06536 hypothetical protein 5 4 17 6 At4g06716 hypothetical protein 5 4 17 7 At4g07452 hypothetical protein 5 4 17 8 At4g07500 hypothetical protein 5 4 17 9 At4g10660 hypothetical protein 5 4 17 10 At4g10720 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 5 4 17 11 At4g10880 "hypothetical protein predicted proteins, Arabidopsis thaliana" 5 4 17 12 At4g10925 F-box family protein contains Pfam PF00646: F-box domain 5 4 17 13 At4g11070 "WRKY family transcription factor other putative proteins, Arabidopsis thaliana" 5 4 17 14 At4g11120 "translation elongation factor Ts (EF-Ts), putative similar to ethylene-responsive elongation factor EF-Ts precursor [Lycopersicon esculentum] GI:5669636; contains Pfam profile PF00889: Elongation factor TS" 5 4 17 15 At4g11280 1-aminocyclopropane-1-carboxylate synthase 6 / ACC synthase 6 (ACS6) identical to GI:3746125 5 4 17 16 At4g11340 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 5 4 17 17 At4g14070 "AMP-binding protein, putative similar to AMP-binding protein [gi:1617272] from Brassica napus; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA acyl-CoA synthetase-like protein GI:20799730" 5 4 17 18 At4g14110 "COP9 signalosome subunit, putative / CSN subunit, putative (CSN8) CSN8, FUS7; identical to cDNA CSN complex subunit 8 (CSN8) GI:18056672" 5 4 17 19 At4g14225 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 5 4 17 20 At4g14280 hypothetical protein 5 4 17 21 At4g14385 expressed protein 5 4 17 22 At4g14430 "enoyl-CoA hydratase/isomerase family protein low siimilarity to 2-cyclohexenylcarbonyl CoA isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA isomerase [Escherichia coli] GI:2764829; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 5 4 17 23 At4g14590 expressed protein 5 4 17 24 At4g14640 calmodulin-8 (CAM8) identical to calmodulin 8 GI:5825600 from [Arabidopsis thaliana] 5 4 17 25 At4g17000 hypothetical protein 5 4 18 1 At4g17040 "ATP-dependent Clp protease proteolytic subunit, putative similar to ATP-dependent Clp protease proteolytic subunit GI:7264063 from [Synechococcus sp.PCC 7942]" 5 4 18 2 At4g17210 "myosin heavy chain-related contains weak similarity to Swiss-Prot:P14105 myosin heavy chain, nonmuscle (Cellular myosin heavy chain) (NMMHC) [Gallus gallus]" 5 4 18 3 At4g17250 expressed protein 5 4 18 4 At4g17470 palmitoyl protein thioesterase family protein 5 4 18 5 At4g17505 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function; expression supported by MPSS 5 4 18 6 At4g17640 "casein kinase II beta chain, putative similar to casein kinase II beta' chain (CK II) [Arabidopsis thaliana] SWISS-PROT:P40229" 5 4 18 7 At4g17695 myb family transcription factor (KAN3) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA GARP-like putative transcription factor KANADI3 (KAN3) GI:15723596 5 4 18 8 At4g20300 expressed protein 5 4 18 9 At4g20350 "expressed protein hypothetical protein - Caenorhabditis elegans,SPTREMBL:Q17527" 5 4 18 10 At4g20510 expressed protein 5 4 18 11 At4g20690 hypothetical protein 5 4 18 12 At4g20860 FAD-binding domain-containing protein simlar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 5 4 18 13 At4g20920 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 5 4 18 14 At4g21100 "UV-damaged DNA-binding protein, putative similar to UV-damaged DNA binding protein (GI:12082087) [Oryza sativa] and damage-specific DNA binding protein 1, Homo sapiens, PIR2:I38908; contains Pfam PF03178 : CPSF A subunit region" 5 4 18 15 At4g21150 ribophorin II (RPN2) family protein contains Pfam domain PF05817: Ribophorin II (RPN2) 5 4 18 16 At4g23730 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044 Pfam profile PF01263: Aldose 1-epimerase 5 4 18 17 At4g23780 hypothetical protein 5 4 18 18 At4g23930 "expressed protein hin1 protein homolog, Oryza sativa, PIR:T02662" 5 4 18 19 At4g23980 auxin-responsive factor (ARF9) contains Pfam profiles: PF02309 AUX/IAA family and PF02362: B3 DNA binding domain 5 4 18 20 At4g24150 expressed protein ; expression supported by MPSS 5 4 18 21 At4g24190 "shepherd protein (SHD) / clavata formation protein, putative nearly identical to SHEPHERD [Arabidopsis thaliana] GI:19570872; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 5 4 18 22 At4g24310 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 5 4 18 23 At4g24380 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) 5 4 18 24 At4g26940 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 5 4 18 25 At4g26990 expressed protein 5 4 19 1 At4g27150 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 identical to SP|P15458 5 4 19 2 At4g27230 "histone H2A, putative strong similarity to histone H2A Arabidopsis thaliana GI:7595337, Triticum aestivum GI:536892, Picea abies SP|P35063; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 5 4 19 3 At4g27410 "no apical meristem (NAM) family protein (RD26) contains Pfam PF02365: No apical meristem (NAM) domain; Arabidopsis thaliana nap gene,PID:e1234813; identical to cDNA RD26 mRNA for NAM-like protein GI:15375403" 5 4 19 4 At4g27450 "expressed protein similar to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 5 4 19 5 At4g27610 expressed protein 5 4 19 6 At4g27630 expressed protein 5 4 19 7 At4g30230 hypothetical protein 5 4 19 8 At4g30290 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana]" 5 4 19 9 At4g30450 glycine-rich protein 5 4 19 10 At4g30490 AFG1-like ATPase family protein contains Pfam profile: PF03969 AFG1-like ATPase 5 4 19 11 At4g30650 "hydrophobic protein, putative / low temperature and salt responsive protein, putative similar to SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana}; contains Pfam profile PF01679: Uncharacterized protein family" 5 4 19 12 At4g30710 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 5 4 19 13 At4g30830 "expressed protein weak similarity to M protein type 1 [Streptococcus pyogenes] GI:311758; contains Pfam profile PF04576: Protein of unknown function, DUF593" 5 4 19 14 At4g30890 "ubiquitin-specific protease 24, putative (UBP24) identical to ubiquitin-specific protease 24 [Arabidopsis thaliana] GI:11993488" 5 4 19 15 At4g33410 signal peptide peptidase family protein contains Pfam domain PF04258: Membrane protein of unknown function (DUF435) 5 4 19 16 At4g33470 histone deacetylase family protein similar to histone deacetylase 10 isoform alpha [Homo sapiens] GI:15213865; contains Pfam profile PF00850: Histone deacetylase family 5 4 19 17 At4g33620 "Ulp1 protease family protein low similarity to SP|Q9BQF6 SUMO-1-specific protease 2 (EC 3.4.22.-) (Sentrin-specific protease SENP7) {Homo sapiens}; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 5 4 19 18 At4g33660 expressed protein 5 4 19 19 At4g33830 "glycosyl hydrolase family 10 protein xylan endohydrolase isoenzyme X-I, Hordeum vulgare,PID:g1813595" 5 4 19 20 At4g33880 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 5 4 19 21 At4g34000 "ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) / ABA-responsive elements-binding factor (ABF3) identical to abscisic acid responsive elements-binding factor (ABF3) GI:6739280 from [Arabidopsis thaliana]; identical to cDNA abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds GI:6739279" 5 4 19 22 At4g34050 "caffeoyl-CoA 3-O-methyltransferase, putative nearly identical to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa] isoform contains a GT-TG intron which removes an internal segment of the protein." 5 4 19 23 AT5G57480 PC-1 D08 5 4 19 24 3XSSC PC-1 D20 5 4 19 25 AT1G29930 PC-1 H08 5 4 20 1 3XSSC PC-1 H20 5 4 20 2 AT3G44150 PC-1 L08 5 4 20 3 3XSSC PC-1 L20 5 4 20 4 AT4G00810 PC-1 P08 5 4 20 5 3XSSC PC-1 P20 5 4 20 6 At4g36620 zinc finger (GATA type) family protein 5 4 20 7 At4g36660 expressed protein 5 4 20 8 At4g36800 "RUB1-conjugating enzyme, putative (RCE1) this gene is frameshifted and may be a pseudogene; identical over first 79 amino acids to RUB1 conjugating enzyme [Arabidopsis thaliana] GI:6635457" 5 4 20 9 At4g36860 "LIM domain-containing protein low similarity to LIM-domain protein [Branchiostoma floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens] GI:7209525; contains Pfam profile PF00412: LIM domain" 5 4 20 10 At4g37030 hypothetical protein 5 4 20 11 At4g37090 expressed protein 5 4 20 12 At4g37250 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 5 4 20 13 At4g37300 expressed protein 5 4 20 14 At4g39900 expressed protein 5 4 20 15 At4g39952 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 20 16 At4g40100 ABA-responsive protein-related low similarity to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 5 4 20 17 At5g01030 expressed protein 5 4 20 18 At5g01200 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 5 4 20 19 At5g01230 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 5 4 20 20 At5g01390 "DNAJ heat shock protein, putative similar to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 5 4 20 21 At5g01450 expressed protein 5 4 20 22 At5g04150 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; PMID: 12679534 5 4 20 23 At5g04210 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 5 4 20 24 At5g04390 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 5 4 20 25 At5g04430 "KH domain-containing protein NOVA, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70477" 5 4 21 1 At5g04630 "cytochrome P450, putative cytochrome P450 77A3p, Glycine max, PIR:T05948" 5 4 21 2 At5g04690 expressed protein 5 4 21 3 At5g04830 expressed protein 5 4 21 4 At5g04890 "small heat shock-like protein (RTM2) similar to 17.9 kDa heat-shock protein [Helianthus annuus] GI:11990130; contains Pfam profile PF00011: Hsp20/alpha crystallin family; supporting cDNA gi|7407072|gb|AF208051.1|AF208051; identical to cDNA small heat shock-like protein (RTM2) GI:7407072, small heat shock-like protein [Arabidopsis thaliana] GI:7407073" 5 4 21 5 At5g07440 glutamate dehydrogenase 2 (GDH2) identical to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis thaliana] SWISS-PROT:Q38946 5 4 21 6 At5g07490 hypothetical protein 5 4 21 7 At5g07670 F-box family protein similar to unknown protein (pir||C71419) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 5 4 21 8 At5g07720 "galactosyl transferase GMA12/MNN10 family protein very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 5 4 21 9 At5g07920 "diacylglycerol kinase 1 (DGK1) identical to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1, DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017" 5 4 21 10 At5g07980 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 5 4 21 11 At5g08141 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 5 4 21 12 At5g08180 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 5 4 21 13 At5g11220 expressed protein 5 4 21 14 At5g11280 expressed protein 5 4 21 15 At5g11450 "oxygen-evolving complex-related 23 kDa polypeptide of water-oxidizing complex of photosystem II, Nicotiana tabacum, EMBL:NT23WOP2B" 5 4 21 16 At5g11510 myb family transcription factor (MYB3R4) contains Pfam profile: PF00249 myb-like DNA-binding domain 5 4 21 17 At5g11670 "malate oxidoreductase, putative similar to NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (SP|P12628) {Phaseolus vulgaris}" 5 4 21 18 At5g11730 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 5 4 21 19 At5g11910 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 5 4 21 20 At5g11970 expressed protein 5 4 21 21 At5g15110 pectate lyase family protein similar to pectate lyase P59 SP:P15722 from [Lycopersicon esculentum] 5 4 21 22 At5g15170 "tyrosyl-DNA phosphodiesterase-related similar to Chain A, Crystal Structure Of Human Tyrosyl-Dna Phosphodiesterase (Tdp1) [Homo sapiens] GI:20150581" 5 4 21 23 At5g15320 "expressed protein predicted protein, Arabidopsis thaliana" 5 4 21 24 At5g15390 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P19396 tRNA (Guanosine-2'-O-)-methyltransferase (EC 2.1.1.34) {Escherichia coli O157:H7}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 5 4 21 25 At5g15550 "transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak);" 5 4 22 1 At5g15600 expressed protein 5 4 22 2 At5g15750 RNA-binding S4 domain-containing protein 40S RIBOSOMAL PROTEINs - different species 5 4 22 3 At5g15790 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 5 4 22 4 At5g18430 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 5 4 22 5 At5g18480 "glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-1 from Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730], Homo sapiens [SP|P46976]; contains Pfam profile PF01501: Glycosyl transferase family 8" 5 4 22 6 At5g18630 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 5 4 22 7 At5g18660 isoflavone reductase-related low similarity to SP|P52575 Isoflavone reductase (EC 1.3.1.-) (IFR) {Medicago sativa} 5 4 22 8 At5g18820 "chaperonin, putative similar to SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit, CPN-60 alpha)[Pisum sativum]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 5 4 22 9 At5g18870 inosine-uridine preferring nucleoside hydrolase-related 5 4 22 10 At5g19030 "RNA recognition motif (RRM)-containing protein low similarity to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis} SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 5 4 22 11 At5g19060 expressed protein ; expression supported by MPSS 5 4 22 12 At5g22410 "peroxidase, putative identical to peroxidase ATP14a [Arabidopsis thaliana] gi|1546690|emb|CAA67335" 5 4 22 13 At5g22470 "poly (ADP-ribose) polymerase family protein similar to poly(ADP)-ribose polymerase [Zea mays] GI:3928871; contains Pfam profiles PF00644: Poly(ADP-ribose) polymerase catalytic domain, PF00533: BRCA1 C Terminus (BRCT) domain, PF05406: WGR domain" 5 4 22 14 At5g22620 "phosphoglycerate/bisphosphoglycerate mutase family protein weak similarity to SP|P15259 Phosphoglycerate mutase, muscle form (EC 5.4.2.1 {Homo sapiens}; contains Pfam profile PF00300: phosphoglycerate mutase family" 5 4 22 15 At5g22660 F-box family protein contains F-box domain Pfam:PF00646 5 4 22 16 At5g22830 "magnesium transporter CorA-like family protein weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein; supporting cDNA gi|12007446|gb|AF322255.1|AF322255" 5 4 22 17 At5g22875 expressed protein 5 4 22 18 At5g23050 acyl-activating enzyme 17 (AAE17) nearly identical to acyl-activating enzyme 17 [Arabidopsis thaliana] GI:29893266; similar to acetyl-CoA synthetase [SP|P27095] from Methanothrix soehngenii; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA acyl-activating enzyme 17 (At5g23050) GI:29893265 5 4 22 19 At5g23090 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) identical to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 5 4 22 20 At5g25760 "ubiquitin-conjugating enzyme, putative similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) {Pichia angusta}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 5 4 22 21 At5g25810 AP2 domain-containing transcription factor TINY (TINY) identical to transcription factor TINY (GP:1246403) [Arabidopsis thaliana] 5 4 22 22 At5g25980 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to thioglucosidase (GI:871992) [Arabidopsis thaliana]; similar to myrosinase precursor (EC 3.2.3.1)(Sinigrinase) (Thioglucosidase) SP|P37702 from [Arabidopsis thaliana] 5 4 22 23 At5g26040 histone deacetylase family protein (HDA2) identical to HDA2 [Arabidopsis thaliana] GI:21105771; similar to SP|Q96DB2 Histone deacetylase 11 (HD11) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 5 4 22 24 At5g26180 NOL1/NOP2/sun family protein similar to NOL1R [Homo sapiens] GI:16226071; contains Pfam profile PF01189: NOL1/NOP2/sun family 5 4 22 25 At5g26240 chloride channel protein (CLC-d) identical to CLC-d chloride channel protein [Arabidopsis thaliana] GI:1742959 5 4 23 1 At5g26667 uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) identical to uridylate kinase / UMP/CMP kinase SP:O04905 from [Arabidopsis thaliana] 5 4 23 2 At5g26731 expressed protein 5 4 23 3 At5g33230 hypothetical protein 5 4 23 4 At5g33320 "triose phosphate/phosphate translocator, putative similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator [Cauliflower] {Brassica oleracea}" 5 4 23 5 At5g34540 hypothetical protein 5 4 23 6 At5g34850 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 5 4 23 7 At5g34980 hypothetical protein 5 4 23 8 At5g35080 expressed protein 5 4 23 9 At5g35280 "hypothetical protein similar to At2g10840, At2g10500, At2g05860, At4g07310, At4g07430, At1g39270" 5 4 23 10 At5g35330 methyl-CpG-binding domain-containing protein similar to methyl-CpG binding protein MBD4 [Mus musculus] GI:3800807; contains Pfam profile PF01429: Methyl-CpG binding domain 5 4 23 11 At5g38470 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform I GI:1914683 from [Daucus carota]" 5 4 23 12 At5g38530 "tryptophan synthase-related low similarity to tryptophan synthases, beta subunit, from Lactococcus lactis [SP|Q01998], Pyrococcus kodakaraensis [SP|Q9YGB0], Thermus thermophilus [SP|P16609]; contains Pfam pyridoxal-phosphate dependent enzyme domain PF00291" 5 4 23 13 At5g38690 expressed protein 5 4 23 14 At5g38750 "asparaginyl-tRNA synthetase family contains similarity to Swiss-Prot:Q9SW96 asparaginyl-tRNA synthetase, cytoplasmic 1 (Asparagine-- tRNA ligase 1) (AsnRS 1) [Arabidopsis thaliana]" 5 4 23 15 At5g38930 "germin-like protein, putative similar to germin-like portein GLP9 [SP|Q9LEA7]; contains PS00725 Germin family signature" 5 4 23 16 At5g38970 "cytochrome P450, putative similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum};" 5 4 23 17 At5g39170 hypothetical protein 5 4 23 18 At5g39220 "hydrolase, alpha/beta fold family protein contains Pfam profile: PF00561 alpha/beta hydrolase fold" 5 4 23 19 At5g42060 expressed protein 5 4 23 20 At5g42100 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]" 5 4 23 21 At5g42260 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 5 4 23 22 At5g42320 "zinc carboxypeptidase family protein contains Pfam domain, PF00246: Zinc carboxypeptidase" 5 4 23 23 At5g42490 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 5 4 23 24 At5g42560 "abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 5 4 23 25 At5g42720 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 5 4 24 1 At5g42780 zinc finger homeobox family protein / ZF-HD homeobox family protein similar to unknown protein (pir||T05568) 5 4 24 2 At5g45320 expressed protein ; expression supported by MPSS 5 4 24 3 At5g45360 F-box family protein similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 5 4 24 4 At5g45520 hypothetical protein 5 4 24 5 At5g45573 hypothetical protein 5 4 24 6 At5g45720 hypothetical protein 5 4 24 7 At5g45760 transducin family protein / WD-40 repeat family protein 5 4 24 8 At5g45920 GDSL-motif lipase/hydrolase family protein contains similarity to SP|P41734 Isoamyl acetate-hydrolyzing esterase (EC 3.1.-.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 5 4 24 9 At5g45980 homeobox-leucine zipper protein-related contains similarity to homeodomain transcription factor; contains weak hit to Pfam profile PF00046: Homeobox domain 5 4 24 10 At5g48550 F-box family protein-related similar to unknown protein (gb AAF19735.1); contains TIGRFAM TIGR01640 : F-box protein interaction domain 5 4 24 11 At5g48600 "structural maintenance of chromosomes (SMC) family protein similar to SP|P50532 Chromosome assembly protein XCAP-C {Xenopus laevis}; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain" 5 4 24 12 At5g48730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 24 13 At5g48790 expressed protein 5 4 24 14 At5g48950 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 5 4 24 15 At5g49010 DNA replication protein-related similar to Sld5 [Xenopus laevis] GI:29365477; contains Pfam profile PF05916: Eukaryotic protein of unknown function (DUF873) 5 4 24 16 At5g49180 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 5 4 24 17 At5g49220 expressed protein 5 4 24 18 At5g51940 "DNA-directed RNA polymerase II, putative similar to SP|O88828 DNA-directed RNA polymerase II 14.4 kDa polypeptide (EC 2.7.7.6) (RPB6) (RPB14.4) {Rattus norvegicus}; contains Pfam profile PF01192: RNA polymerases K / 14 to 18 kDa subunit" 5 4 24 19 At5g52000 "importin alpha-1 subunit, putative similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 5 4 24 20 At5g52160 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 5 4 24 21 At5g52210 "ADP-ribosylation factor, putative similar to arf-related protein (ARP) (SP:Q63055){Rattus norvegicus}; contains Pfam domain PF00025: ADP-ribosylation factor family" 5 4 24 22 At5g52390 "photoassimilate-responsive protein, putative similar to PIR|S62698 photoassimilate-responsive protein precursor (clone PAR-1a) - common tobacco" 5 4 24 23 At5g52450 MATE efflux protein-related strong similarity to unknown protein (pir||T02324); contains Pfam profile PF01554 Uncharacterized membrane protein family 5 4 24 24 At5g52610 F-box family protein contains F-box domain Pfam:PF00646 5 4 24 25 At5g52660 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA-binding domain 5 4 25 1 At5g55330 "membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related contains similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 5 4 25 2 At5g55390 hydroxyproline-rich glycoprotein family protein 5 4 25 3 At5g55560 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 5 4 25 4 At5g55610 expressed protein 5 4 25 5 At5g55760 "transcriptional regulator Sir2 family protein contains Pfam domain PF02146: transcriptional regulator, Sir2 family" 5 4 25 6 At5g55820 expressed protein 5 4 25 7 At5g55980 serine-rich protein-related contains some similarity to serine-rich proteins 5 4 25 8 At5g56040 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 5 4 25 9 At5g58620 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat" 5 4 25 10 At5g58680 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeats (4 copies) 5 4 25 11 At5g58840 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo]; non-consensus acceptor site TT at exon 6 5 4 25 12 At5g58900 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 5 4 25 13 At5g59050 expressed protein 5 4 25 14 At5g59100 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 5 4 25 15 At5g59250 "sugar transporter family protein similar to D-xylose-H+ symporter from Lactobacillus brevis GI:2895856, sugar-porter family protein 2 [Arabidopsis thaliana] GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 5 4 25 16 At5g59305 expressed protein 5 4 25 17 At5g61930 expressed protein contains Pfam PF05634: Arabidopsis thaliana protein of unknown function (DUF794) 5 4 25 18 At5g61990 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 25 19 At5g62160 "metal transporter, putative (ZIP12) identical to putative metal transporter ZIP12 [Arabidopsis thaliana] gi|17385794|gb|AAL38437; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 5 4 25 20 At5g62200 embryo-specific protein-related contains weak similarity to embryo-specific protein 3 (GI:3335171) [Arabidopsis thaliana] 5 4 25 21 At5g62380 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; OsNAC7, Oryza sativa, EMBL:AB028186" 5 4 25 22 At5g62440 expressed protein 5 4 25 23 At5g62575 expressed protein 5 4 25 24 At5g62640 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 5 4 25 25 At5g65200 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 5 4 26 1 At5g65220 ribosomal protein L29 family protein contains Pfam profile PF00831: ribosomal protein L29 5 4 26 2 At5g65400 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) contains Pfam profile: PF03959 domain of unknown function (DUF341) 5 4 26 3 At5g65440 expressed protein 5 4 26 4 At5g65610 expressed protein ; expression supported by MPSS 5 4 26 5 At5g65670 auxin-responsive protein / indoleacetic acid-induced protein 9 (IAA9) identical to SP|Q38827 Auxin-responsive protein IAA9 (Indoleacetic acid-induced protein 9) {Arabidopsis thaliana} 5 4 26 6 At5g65820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 5 4 26 7 At5g65880 expressed protein 5 4 26 8 ath-MIR157d miRNA gene Arabidopsis thaliana miR157d stem-loop 5 4 26 9 ath-MIR166c miRNA gene Arabidopsis thaliana miR166c stem-loop 5 4 26 10 ath-MIR172b miRNA gene Arabidopsis thaliana miR172b stem-loop 5 4 26 11 3xSSC 3xSSC 5 4 26 12 3xSSC 3xSSC 5 4 26 13 3xSSC 3xSSC 5 4 26 14 3xSSC 3xSSC 5 4 26 15 3xSSC 3xSSC 5 4 26 16 At3g44790 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5 4 26 17 At3g44840 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 5 4 26 18 At3g45010 "serine carboxypeptidase III, putative similar to serine carboxypeptidase III from Oryza sativa SP|P37891, Matricaria chamomilla GI:6960455, Hordeum vulgare SP|P21529, Triticum aestivum SP|P11515; contains Pfam profile PF0450 serine carboxypeptidase" 5 4 26 19 At3g45060 "high-affinity nitrate transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 5 4 26 20 At3g45220 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 5 4 26 21 At3g45300 isovaleryl-CoA-dehydrogenase (IVD) identical to isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana] GI:5596622 5 4 26 22 At3g45480 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 5 4 26 23 At3g45540 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature" 5 4 26 24 Blank Blank 5 4 26 25 Blank Blank 6 1 1 1 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 6 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 6 1 1 3 Alien3 Control: Stratagene Spotreport Alien Oligo 6 1 1 4 Alien9 Control: Stratagene Spotreport Alien Oligo 6 1 1 5 atc05 Randomly generated negative control 6 1 1 6 atc11 Randomly generated negative control 6 1 1 7 At5g46430 60S ribosomal protein L32 (RPL32B) 6 1 1 8 atc01 Randomly generated negative control 6 1 1 9 At1g01030 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 6 1 1 10 At1g01080 "33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to 33 KDA RIBONUCLEOPROTEIN GB:P19684 from [Nicotiana sylvestris]" 6 1 1 11 At1g01220 GHMP kinase-related contains similarity to L-fucose kinase [Homo sapiens] gi|21212956|emb|CAD29647 6 1 1 12 At1g01280 cytochrome P450 family protein similar to cytochrome P450 GB:BAA92894 GI:7339658 from [ Petunia hybrida] 6 1 1 13 At1g01470 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P46518 Late embryogenesis abundant protein Lea14-A {Gossypium hirsutum}; contains Pfam profile PF03168: Late embryogenesis abundant protein" 6 1 1 14 At1g01520 myb family transcription factor similar to myb-related protein GI:2505876 from [Arabidopsis thaliana] 6 1 1 15 At1g01690 expressed protein 6 1 1 16 At1g01740 protein kinase family protein low similarity to protein kinase [Arabidopsis thaliana] GI:2852449; contains Pfam profile: PF00069 Protein kinase domain 6 1 1 17 At1g04330 expressed protein EST gb|H76414 comes from this gene 6 1 1 18 At1g04390 expressed protein 6 1 1 19 At1g04550 auxin-responsive protein / indoleacetic acid-induced protein 12 (IAA12) identical to SP|Q38830 Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) {Arabidopsis thaliana} 6 1 1 20 At1g04590 expressed protein isoform contains GG acceptor splice site at intron 7 6 1 1 21 At1g04770 male sterility MS5 family protein similar to male sterility MS5 [Arabidopsis thaliana] GI:3859112; contains Pfam profile PF00515 TPR Domain 6 1 1 22 At1g04830 RabGAP/TBC domain-containing protein low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 6 1 1 23 At1g04970 "lipid-binding serum glycoprotein family protein low similarity to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain" 6 1 1 24 At1g05020 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related Similar to clathrin assembly protein gb|X68878 (AP180) from Rattus norvegicus; contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; EST gb|W43552 comes from this gene 6 1 1 25 At1g07630 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 6 1 2 1 At1g07680 hypothetical protein 6 1 2 2 At1g07780 phosphoribosylanthranilate isomerase 1 (PAI1) identical to gi:619751 6 1 2 3 At1g07820 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 6 1 2 4 At1g07960 thioredoxin family protein low similarity to protein disulfide isomerase 4 [Giardia intestinalis] GI:13489047; contains Pfam profile PF00085: Thioredoxin 6 1 2 5 At1g07990 SIT4 phosphatase-associated family protein contains Pfam profile: PF04499 SIT4 phosphatase-associated protein 6 1 2 6 At1g08120 hypothetical protein 6 1 2 7 At1g08160 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related weak similarity to hin1 [Nicotiana tabacum] GI:1619321 6 1 2 8 At1g10740 expressed protein 6 1 2 9 At1g10800 hypothetical protein 6 1 2 10 At1g10960 "ferredoxin, chloroplast, putative strong similarity to FERREDOXIN PRECURSOR GB:P16972 [SP|P16972] from [Arabidopsis thaliana]" 6 1 2 11 At1g11000 "seven transmembrane MLO family protein / MLO-like protein 4 (MLO4) identical to membrane protein Mlo4 [Arabidopsis thaliana] gi|14091578|gb|AAK53797; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 6 1 2 12 At1g11190 bifunctional nuclease (BFN1) identical to bifunctional nuclease bfn1 [Arabidopsis thaliana] gi|4099831|gb|AAD00693 6 1 2 13 At1g11250 "syntaxin, putative (SYP125) similar to syntaxin-related protein At-SYR1 GB:AAD11809 GI:4206789 from [Arabidopsis thaliana]" 6 1 2 14 At1g11400 expressed protein 6 1 2 15 At1g11440 expressed protein 6 1 2 16 At1g14220 ribonuclease T2 family protein contains similarity to S-like ribonuclease PD1 GI:9957752 from [Prunus dulcis]; contains ribonuclease T2 family histidine protein motif 6 1 2 17 At1g14270 CAAX amino terminal protease family protein contains Pfam profile PF02517: CAAX amino terminal protease family 6 1 2 18 At1g14410 DNA-binding protein-related similar to DNA-binding protein p24 GI:9651810 from [Solanum tuberosum] 6 1 2 19 At1g14470 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 1 2 20 At1g14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to human splicing factor GB:CAA59494 GI:899298 from [Homo sapiens]; contains Pfam profile PF01805: Surp module 6 1 2 21 At1g14685 expressed protein 6 1 2 22 At1g14820 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 [Saccharomyces cerevisiae (Baker's yeast)] 6 1 2 23 At1g14850 non-repetitive/WGA-negative nucleoporin family protein contains Pfam profile: PF03177 non-repetitive/WGA-negative nucleoporin 6 1 2 24 At1g17540 protein kinase-related similar to serine/threonine protein kinase Fen [Lycopersicon esculentum] GI:1809259 6 1 2 25 At1g17600 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 1 3 1 At1g17750 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor-like protein kinase INRPK1 GI:1684913 from [Ipomoea nil]" 6 1 3 2 At1g17790 DNA-binding bromodomain-containing protein similar to SP|P13709 Female sterile homeotic protein (Fragile-chorion membrane protein) {Drosophila melanogaster}; contains Pfam profile PF00439: Bromodomain 6 1 3 3 At1g17950 myb family transcription factor (MYB52) similar to myb-like protein GI:6979341 from [Oryza sativa] 6 1 3 4 At1g18000 expressed protein contains 11 transmembrane domains; 6 1 3 5 At1g18210 "calcium-binding protein, putative similar to SP|Q9M7R0 Calcium-binding allergen Ole e 8 (PCA18/PCA23) {Olea europaea}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 6 1 3 6 At1g18270 "ketose-bisphosphate aldolase class-II family protein low similarity to KbaY (tagatose-1,6-bisphosphate aldolase) [Escherichia coli] GI:8895753; contains Pfam profile PF01116: Fructose-bisphosphate aldolase class-II" 6 1 3 7 At1g21130 "O-methyltransferase, putative similar to GI:2781394" 6 1 3 8 At1g21200 expressed protein 6 1 3 9 At1g21370 expressed protein 6 1 3 10 At1g21430 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana" 6 1 3 11 At1g21620 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 6 1 3 12 At1g21680 "expressed protein similar to TolB protein precursor (SP:Q9ZDM5) {Rickettsia prowazekii}; ESTs gb|N96028, gb|F14286, gb|T20680, gb|F14443, gb|AA657300 and gb|N65244 come from this gene" 6 1 3 13 At1g21840 expressed protein weak similarity to SP|Q07402 Urease accessory protein ureF [strain TB-90] {Bacillus sp.} 6 1 3 14 At1g21890 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 6 1 3 15 At1g24460 "myosin-related contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II) (SP:Q99323) {Drosophila melanogaster} similar to EST gb|T76116" 6 1 3 16 At1g24510 "T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 6 1 3 17 At1g24807 "anthranilate synthase beta subunit, putative similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj|AV540153.1, dbj|AV557490.1, gb|AI997696.1, gb|AW004516.1, dbj|AV521371.1" 6 1 3 18 At1g25054 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein contains Pfam domain PF03331: UDP-3-O-acyl N-acetylglycosamine deacetylase 6 1 3 19 At1g25340 myb family transcription factor (MYB116) contains Pfam profile: PF00249 myb-like DNA-binding domain 6 1 3 20 At1g25390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 3 21 At1g25550 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 6 1 3 22 At1g25988 hypothetical protein 6 1 3 23 At1g28960 MutT/nudix family protein similar to coenzyme A diphosphatase [Mus musculus] GI:12746410; contains Pfam profile PF00293: NUDIX domain 6 1 3 24 At1g29040 expressed protein 6 1 3 25 At1g29220 transcriptional regulator family protein similar to Transcriptional regulator protein HCNGP (Swiss-Prot:Q02614) [Mus musculus] 6 1 4 1 At1g29280 WRKY family transcription factor similar to DNA binding protein WRKY3 GB:U56834 GI:1432055 from [Petroselinum crispum] 6 1 4 2 At1g29420 auxin-responsive family protein Similar to auxin-induced protein TGSAUR12 (GI:10185816) [Tulipa gesneriana] 6 1 4 3 At1g29480 hypothetical protein 6 1 4 4 At1g29670 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif 6 1 4 5 At1g29730 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam domains, PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain" 6 1 4 6 At1g32570 hypothetical protein 6 1 4 7 At1g32640 basic helix-loop-helix (bHLH) protein (RAP-1) identical to bHLH protein GB:CAA67885 GI:1465368 from [Arabidopsis thaliana] 6 1 4 8 At1g32800 PHD finger protein-related contains low similarity to PHD-finger domain proteins 6 1 4 9 At1g32870 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 6 1 4 10 At1g33050 expressed protein 6 1 4 11 At1g33080 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 6 1 4 12 At1g33290 sporulation protein-related isoform contains non-consensus AT-donor acceptor site at intron 6; similar to Stage III sporulation protein AA. (Swiss-Prot:Q01367) [Bacillus subtilis]; similar to SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to stage III sporulation protein AA (GI:18145497) [Clostridium perfringens str. 13] 6 1 4 13 At1g33360 "ATP-dependent Clp protease ATP-binding subunit ClpX, putative similar to CLP protease regulatory subunit CLPX GI:2674203 from [Arabidopsis thaliana]" 6 1 4 14 At1g42515 hypothetical protein 6 1 4 15 At1g42680 myosin-related contains similarity to myosin GI:433663 from [Arabidopsis thaliana] 6 1 4 16 At1g43190 "polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Rattus norvegicus} SP|Q00438, {Homo sapiens} SP|P26599, [Homo sapiens] GI:35770; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 6 1 4 17 At1g43320 hypothetical protein 6 1 4 18 At1g43680 hypothetical protein 6 1 4 19 At1g43730 hypothetical protein 6 1 4 20 At1g43970 hypothetical protein 6 1 4 21 At1g44030 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 1 4 22 At1g49130 zinc finger (B-box type) family protein contains similarity to zinc finger protein GI:3618318 from [Oryza sativa] 6 1 4 23 At1g49190 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain ;contains similarity to two-component response regulator protein (ARR2) GI:4210451 from [Arabidopsis thaliana] 6 1 4 24 At1g49380 cytochrome c biogenesis protein family contains Pfam PF05140: ResB-like family; similar to CCS1 (GI:2749939) [Chlamydomonas reinhardtii]; similar to Ccs1 (GI:6137102) [Synechococcus sp. PCC 6301] 6 1 4 25 At1g49430 long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase nearly identical to acyl CoA synthetase (MF45P) GI:1617268 from [Brassica napus] 6 1 5 1 At1g49630 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 6 1 5 2 At1g49670 "ARP protein (REF) identical to ARP protein GB:CAA89858 GI:886434 from [Arabidopsis thaliana]; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 6 1 5 3 At1g49860 "glutathione S-transferase, putative similar to GI:860955 from [Hyoscyamus muticus] (Plant Physiol. 109 (1), 253-260 (1995))" 6 1 5 4 At1g49920 "zinc finger protein-related weak similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea mays] GI:1857256; contains Pfam profiles PF03108: MuDR family transposase, PF04434: SWIM zinc finger" 6 1 5 5 At1g52770 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 6 1 5 6 At1g52825 expressed protein 6 1 5 7 At1g52970 hypothetical protein 6 1 5 8 At1g53030 "cytochrome c oxidase copper chaperone family protein contains Pfam domian, PF05051: Cytochrome C oxidase copper chaperone (COX17)" 6 1 5 9 At1g53180 expressed protein 6 1 5 10 At1g53250 expressed protein 6 1 5 11 At1g53390 "ABC transporter family protein similar to ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) SP:Q9UNQ0 from [Homo sapiens]" 6 1 5 12 At1g53450 expressed protein 6 1 5 13 At1g56050 GTP-binding protein-related similar to GTP-binding protein GI:10176676 from [Bacillus halodurans] 6 1 5 14 At1g56100 pectinesterase inhibitor domain-containing protein contains TIGRFAM TIGR01614: pectinesterase inhibitor domain; contains weak hit to Pfam PF04043: Plant invertase/pectin methylesterase inhibitor 6 1 5 15 At1g56260 expressed protein ; expression supported by MPSS 6 1 5 16 At1g56300 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI7 DnaJ homolog subfamily B member 8 Mus musculus; contains Pfam profile: PF00226: DnaJ domain 6 1 5 17 At1g56510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 1 5 18 At1g56560 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 6 1 5 19 At1g57540 expressed protein contains similarity to T-box domain GI:5931592 from (Cynops pyrrhogaster) 6 1 5 20 At1g57590 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 6 1 5 21 At1g61460 "S-locus protein kinase, putative contains similarity to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 6 1 5 22 At1g61540 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 1 5 23 At1g61690 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 6 1 5 24 At1g61750 expressed protein contains Pfam profile: PF01657 domain of unknown function 6 1 5 25 At1g61920 hypothetical protein 6 1 6 1 At1g61980 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 6 1 6 2 At1g62180 "5'-adenylylsulfate reductase 2, chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate 5'-adenylylsulfate (APS) sulfotransferase 2 / 3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase homolog 43 (PRH-43) identical to SP|P92981 5'-adenylylsulfate reductase 2, chloroplast precursor (EC 1.8.4.9) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 2) (APS sulfotransferase 2) (Thioredoxin independent APS reductase 2) (3'-phosphoadenosine-5'-phosphosulfate reductase homolog 43) (PAPS reductase homolog 43) (Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS reductase homolog (PRH43) GI:1710115" 6 1 6 3 At1g62240 expressed protein 6 1 6 4 At1g64940 "cytochrome P450, putative similar to cytochrome p450 GI:438242 from [Solanum melongena]" 6 1 6 5 At1g65000 expressed protein 6 1 6 6 At1g65140 ubiquitin carboxyl-terminal hydrolase family protein contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 6 1 6 7 At1g65180 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 1 6 8 At1g65330 MADS-box family protein similar to MADS-box transcription factor GI:6580941 from [Picea abies] 6 1 6 9 At1g65380 "receptor-like protein CLAVATA2 (CLV2) identical to receptor-like protein CLAVATA2 [Arabidopsis thaliana] gi|6049566|gb|AAF02654contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611;" 6 1 6 10 At1g65560 "allyl alcohol dehydrogenase, putative similar to allyl alcohol dehydrogenase from Nicotiana tabacum [gi:6692816]; similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 6 1 6 11 At1g65630 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 6 1 6 12 At1g68370 gravity-responsive protein / altered response to gravity protein (ARG1) identical to Altered Response to Gravity [Arabidopsis thaliana] GI:4249662; contains Pfam profile PF00226 DnaJ domain 6 1 6 13 At1g68430 expressed protein 6 1 6 14 At1g68580 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain and PF05641: Agenet domain 6 1 6 15 At1g68620 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 6 1 6 16 At1g68795 CLE12 CLAVATA3/ESR-Related 12 6 1 6 17 At1g68845 hypothetical protein 6 1 6 18 At1g69010 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 1 6 19 At1g69070 expressed protein 6 1 6 20 At1g71820 expressed protein 6 1 6 21 At1g71860 protein tyrosine phosphatase 1 (PTP1) identical to protein tyrosine phosphatase 1 GI:3170531 from [Arabidopsis thaliana]; contains Pfam profile: PF00102 protein-tyrosine phosphatase 6 1 6 22 At1g72030 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 6 1 6 23 At1g72070 DNAJ heat shock N-terminal domain-containing protein similar to TCJ2 [Trypanosoma cruzi] GI:886414; contains Pfam profile: PF00226: DnaJ domain 6 1 6 24 At1g72230 plastocyanin-like domain-containing protein similar to blue copper protein SP:Q41001 from [Pisum sativum] 6 1 6 25 At1g72290 "trypsin and protease inhibitor family protein / Kunitz family protein similar to water-soluble chlorophyll protein [Raphanus sativus var. niger] GI:16945735, BnD22 drought induced protein [Brassica napus] GI:17813; contains Pfam profile PF00197: Trypsin and protease inhibitor" 6 1 7 1 At1g72480 expressed protein 6 1 7 2 At1g72540 "protein kinase, putative similar to auxin-regulated dual specificity cytosolic kinase [Lycopersicon esculentum] gi|14484938|gb|AAK62821; similar to serine/threonine protein kinase gi|1066501|gb|AAA81538" 6 1 7 3 AT5G57480 PC-1 A07 6 1 7 4 3XSSC PC-1 A19 6 1 7 5 AT1G29930 PC-1 E07 6 1 7 6 3XSSC PC-1 E19 6 1 7 7 AT3G44150 PC-1 I07 6 1 7 8 3XSSC PC-1 I19 6 1 7 9 AT4G00810 PC-1 M07 6 1 7 10 3XSSC PC-1 M19 6 1 7 11 At1g75300 "isoflavone reductase, putative identical to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: Isoflavone reductase" 6 1 7 12 At1g75370 "SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative similar to phosphatidylinositol transfer-like protein III (GI:14486705) [Lotus japonicus]; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminu" 6 1 7 13 At1g75540 zinc finger (B-box type) family protein similar to zinc finger protein GB:BAA33202 GI:3618312 from [Oryza sativa] 6 1 7 14 At1g75620 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 6 1 7 15 At1g75810 expressed protein 6 1 7 16 At1g75870 hypothetical protein 6 1 7 17 At1g76040 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]" 6 1 7 18 At1g76080 thioredoxin family protein low similarity to thioredoxin (TRX) [Fasciola hepatica] GI:6687568; contains Pfam profile PF00085: Thioredoxin 6 1 7 19 At1g78740 hypothetical protein 6 1 7 20 At1g78780 pathogenesis-related family protein contains similarity to pathogen-related protein (GI:499073) (Swiss-Prot:P16273) [Hordeum vulgare] 6 1 7 21 At1g78910 pseudouridine synthase family protein low similarity to SP|P23851 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 6 1 7 22 At1g78955 "beta-amyrin synthase, putative similar to beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and GI:8918271 from [Pisum sativum]" 6 1 7 23 At1g79110 expressed protein 6 1 7 24 At1g79170 hypothetical protein 6 1 7 25 At1g79380 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 6 1 8 1 At1g79430 myb family transcription factor-related 6 1 8 2 At2g01980 "sodium proton exchanger, putative (NHX7) (SOS1) identical to putative Na+/H+ antiporter SOS1 [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 6 1 8 3 At2g02040 "peptide transporter (PTR2-B) / oligopeptide transporter 1-1, putative (OPT1-1) identical to peptide transporter PTR2-B SP:P46032 from [Arabidopsis thaliana]; contains Pfam profile: PF00854 POT family; identical to cDNA NT1 GI:510237" 6 1 8 4 At2g02280 hypothetical protein low similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951 6 1 8 5 At2g02350 SKP1 interacting partner 3 (SKIP3) nearly identical to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 6 1 8 6 At2g02520 hypothetical protein 6 1 8 7 At2g02580 cytochrome P450 family protein 6 1 8 8 At2g02760 "ubiquitin-conjugating enzyme 2 (UBC2) E2; identical to gi:2689242, SP:P42745" 6 1 8 9 At2g02810 UDP-galactose/UDP-glucose transporter contains transmembrane domains; identical to UDP-galactose/UDP-glucose transporter (GI:22651763) [Arabidopsis thaliana] similar to UGTrel1 (GI:1669564) [Rattus rattus]; identical to cDNA UDP-galactose/UDP-glucose transporter GI:22651762 6 1 8 10 At2g06050 "12-oxophytodienoate reductase (OPR3) / delayed dehiscence1 (DDE1) nearly identical to DELAYED DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314]; contains Pfam profile PF00724:oxidoreductase, FAD/FMN-binding; identical to cDNA OPDA-reductase homolog GI:5059114" 6 1 8 11 At2g06210 phosphoprotein-related low similarity to phosphoprotein from Mus musculus GI:1236239; contains Pfam profile PF00515 TPR Domain 6 1 8 12 At2g06750 "hypothetical protein similar to At5g28270, At2g12100, At2g05450, At1g45090, At2g16180" 6 1 8 13 At2g06904 hypothetical protein 6 1 8 14 At2g07190 hypothetical protein 6 1 8 15 At2g07300 hypothetical protein 6 1 8 16 At2g07777 expressed protein 6 1 8 17 At2g07751 "NADH-ubiquinone oxidoreductase chain 3, putative identical to NADH-ubiquinone oxidoreductase chain 3 SP:P48908 from [Raphanus sativus]; contains Pfam profile: PF00507 NADH-ubiquinone/plastoquinone oxidoreductase,chain 3" 6 1 8 18 At2g15180 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 6 1 8 19 At2g15270 expressed protein 6 1 8 20 At2g15400 DNA-directed RNA polymerase II 36 kDa polypeptide B / RNA polymerase II subunit 3 (RPB36B) identical to SP|Q39212 DNA-directed RNA polymerase II 36 kDa polypeptide B (EC 2.7.7.6) (RNA polymerase II subunit 3) {Arabidopsis thaliana} 6 1 8 21 At2g15470 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 6 1 8 22 At2g15630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 1 8 23 At2g15695 expressed protein contains Pfam PF05705: Eukaryotic protein of unknown function (DUF829) 6 1 8 24 At2g15930 hypothetical protein and grail 6 1 8 25 At2g16015 hypothetical protein 6 1 9 1 At2g18876 expressed protein 6 1 9 2 At2g18910 hydroxyproline-rich glycoprotein family protein 6 1 9 3 At2g19070 transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus [gi:2239091]; contains Pfam profile PF02458: Transferase family 6 1 9 4 At2g19150 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 6 1 9 5 At2g19350 expressed protein 6 1 9 6 At2g19410 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 6 1 9 7 At2g19590 "1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative similar to ACC oxidase [Cucumis melo][GI:1183898]" 6 1 9 8 At2g19630 F-box family protein contains F-box domain Pfam:PF00646 6 1 9 9 At2g22290 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:550072 from [Homo sapiens]" 6 1 9 10 At2g22350 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278; contains Pfam profile PF00075: RNase H 6 1 9 11 At2g22530 phosphatidylinositolglycan-related similar to Pig-o [Mus musculus] GI:8099973 6 1 9 12 At2g22610 kinesin motor protein-related 6 1 9 13 At2g22790 expressed protein ; expression supported by MPSS 6 1 9 14 At2g22840 expressed protein identical to transcription activator GRL1 [Arabidopsis thaliana] GI:21539880 (unpublished); supporting cDNA gi|21539879|gb|AY102634.1| 6 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 6 1 9 16 At2g23030 "protein kinase, putative similar to protein kinase 3 [Glycine max] GP|310582|gb|AAB68961" 6 1 9 17 At2g25870 "haloacid dehalogenase-like hydrolase family protein contains Pfam profiles PF00702: haloacid dehalogenase-like hydrolase, PF02130: Uncharacterized protein family UPF0054" 6 1 9 18 At2g25930 hydroxyproline-rich glycoprotein family protein identical to cDNA nematode responsive protein GI:2213418 6 1 9 19 At2g26110 expressed protein 6 1 9 20 At2g26160 F-box family protein contains F-box domain Pfam:PF00646 6 1 9 21 At2g26350 zinc-binding peroxisomal integral membrane protein (PEX10) identical to zinc-binding peroxisomal integral membrane protein GI:4337011 from [Arabidopsis thaliana] 6 1 9 22 At2g26410 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 6 1 9 23 At2g26570 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); weak similarity to merozoite surface protein 3 alpha (GI:27596802) [Plasmodium vivax] 6 1 9 24 At2g26600 glycosyl hydrolase family 17 protein 6 1 9 25 At2g29290 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 6 1 10 1 At2g29340 short-chain dehydrogenase/reductase (SDR) family protein similar to tropinone reductase-I GI:424160 from [Datura stramonium] 6 1 10 2 At2g29500 "17.6 kDa class I small heat shock protein (HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha crystallin family; identified in Scharf, K-D., et al, Cell Stress & Chaperones (2001) 6: 225-237." 6 1 10 3 At2g29540 DNA-directed RNA polymerase I(A) and III(C) 14 kDa subunit (RPAC14) identical to RNA polymerase I(A) and III(C) 14 kDa subunit (AtRPAC14) [Arabidopsis thaliana] GI:1184686 6 1 10 4 At2g29680 "cell division control protein CDC6, putative almost identical to DNA replication protein CDC6 GI:18056480 from [Arabidopsis thaliana]; identical to cDNA CDC6 protein (2g29680 gene) GI:18056479" 6 1 10 5 At2g29740 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 1 10 6 At2g29920 expressed protein 6 1 10 7 At2g29950 expressed protein ; expression supported by MPSS 6 1 10 8 At2g32600 hydroxyproline-rich glycoprotein family protein similar to SWISS-PROT:Q15428 6 1 10 9 At2g32640 expressed protein 6 1 10 10 At2g32770 purple acid phosphatase (PAP13) identical to purple acid phosphatase (PAP13) [Arabidopsis thaliana] GI:20257489; contains Pfam profile PF00149: Ser/Thr protein phosphatase 6 1 10 11 At2g32830 inorganic phosphate transporter (PHT5) identical to inorganic phosphate transporter (PHT5) [Arabidopsis thaliana] GI:2780345 6 1 10 12 At2g32980 expressed protein 6 1 10 13 At2g33040 "ATP synthase gamma chain, mitochondrial (ATPC) identical to SP|Q96250 ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}; contains Pfam profile: PF00231 ATP synthase" 6 1 10 14 At2g33220 expressed protein 6 1 10 15 At2g33270 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin 6 1 10 16 At2g35820 expressed protein 6 1 10 17 At2g35880 expressed protein 6 1 10 18 At2g36030 hypothetical protein 6 1 10 19 At2g36070 "mitochondrial import inner membrane translocase subunit TIM44, putative contains similarity to Swiss-Prot:O35857 import inner membrane translocase subunit TIM44, mitochondrial precursor [Mus musculus]; contains Pfam domian PF04280: Mitochondrial import inner membrane, translocase subunit TIM44" 6 1 10 20 At2g36250 "chloroplast division protein FtsZ (FtsZ2-1) identical to chloroplast division protein AtFtsZ2-1 [Arabidopsis thaliana] GI:15636809, plastid division protein FtsZ [Arabidopsis thaliana] GI:14195704" 6 1 10 21 At2g36300 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 6 1 10 22 At2g36440 hypothetical protein 6 1 10 23 At2g36490 HhH-GPD base excision DNA repair family protein (ROS1) similar to DEMETER protein [Arabidopsis thaliana] GI:21743571; contains Pfam profile PF00730: HhH-GPD superfamily base excision DNA repair protein 6 1 10 24 At2g39090 "tetratricopeptide repeat (TPR)-containing protein low similarity to prediabetic NOD sera-reactive autoantigen [Mus musculus] GI:6670773, anaphase-promoting complex subunit 7 [Homo sapiens] GI:6180015; contains Pfam profile PF00515: TPR Domain" 6 1 10 25 At2g39160 hypothetical protein 6 1 11 1 At2g39320 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 6 1 11 2 At2g39380 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 6 1 11 3 At2g39530 "integral membrane protein, putative contains 3 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 6 1 11 4 At2g39590 40S ribosomal protein S15A (RPS15aC) 6 1 11 5 At2g39730 "ribulose bisphosphate carboxylase/oxygenase activase / RuBisCO activase identical to SWISS-PROT:P10896 ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA)[Arabidopsis thaliana]" 6 1 11 6 At2g39770 "GDP-mannose pyrophosphorylase (GMP1) identical to GDP-mannose pyrophosphorylase from Arabidopsis thaliana [GI:3598958]; updated per Conklin PL et al, PNAS 1999, 96(7):4198-203" 6 1 11 7 At2g42245 RNA-binding protein-related similar to mec-8 [Caenorhabditis elegans] GI:1370048 6 1 11 8 At2g42280 basic helix-loop-helix (bHLH) family protein 6 1 11 9 At2g42450 "lipase class 3 family protein similar to calmodulin-binding heat-shock protein CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam profile PF01764: Lipase, PF03893: Lipase 3 N-terminal region" 6 1 11 10 At2g42500 serine/threonine protein phosphatase PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100 Serine/threonine protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 6 1 11 11 At2g42630 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 11 12 At2g42690 "lipase, putative similar to lipase [Dianthus caryophyllus] GI:4103627; contains Pfam profile PF01764: Lipase" 6 1 11 13 At2g42860 expressed protein 6 1 11 14 At2g42910 ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4) identical to phosphoribosyl diphosphate synthase (prs4) [Arabidopsis thaliana] GI:4902472 6 1 11 15 At2g45590 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 11 16 At2g45630 "oxidoreductase family protein low similarity to SP|P36234 Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) {Hyphomicrobium methylovorum}; contains Pfam profile PF00389: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain" 6 1 11 17 At2g45790 eukaryotic phosphomannomutase family protein contains Pfam profile: PF03332 eukaryotic phosphomannomutase 6 1 11 18 At2g45850 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 6 1 11 19 At2g46030 "ubiquitin-conjugating enzyme 6 (UBC6) E2; identical to gi|431267, SP:P42750, PIR:S52661; contains a ubiquitin-conjugating enzymes active site (PDOC00163)" 6 1 11 20 At2g46070 "mitogen-activated protein kinase, putative / MAPK, putative (MPK12) mitogen-activated protein kinase (MAPK)(AtMPK12), PMID:12119167" 6 1 11 21 At2g46225 expressed protein 6 1 11 22 At2g46270 G-box binding factor 3 (GBF3) identical to G-box binding factor 3 (GBF3) SP:P42776 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 6 1 11 23 At3g01590 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044 Pfam profile PF01263: Aldose 1-epimerase 6 1 11 24 At3g01650 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 6 1 11 25 At3g01820 adenylate kinase family protein contains Pfam profile: PF00406 adenylate kinase 6 1 12 1 At3g01850 "ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family; contains non-consensus splice sites at exon 1 and exon2" 6 1 12 2 At3g01990 "ACT domain-containing protein (ACR6) contains Pfam ACT domain PF01842; similar to uridylyl transferase-like proteins GB:AAD20075, GB:AAC00631 [Arabidopsis thaliana]" 6 1 12 3 At3g02050 "potassium transporter (KUP3) nearly identical to potassium transporter KUP3p [Arabidopsis thaliana] gi|6742169|gb|AAF19432; similar to tiny root hair 1 protein [Arabidopsis thaliana] gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family member, PMID:11500563" 6 1 12 4 At3g02180 expressed protein 6 1 12 5 At3g02220 expressed protein 6 1 12 6 At3g04840 40S ribosomal protein S3A (RPS3aA) similar to 40S ribosomal protein S3A (S phase specific protein GBIS289) GB:P49396 [Brassica rapa] 6 1 12 7 At3g04900 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 6 1 12 8 At3g05070 expressed protein 6 1 12 9 At3g05120 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 6 1 12 10 At3g05280 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 6 1 12 11 At3g05340 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 6 1 12 12 At3g05510 phospholipid/glycerol acyltransferase family protein similar to SP|Q16635 Tafazzin from Homo sapiens; contains Pfam profile: PF01553 Acyltransferase 6 1 12 13 At3g05550 hypoxia-responsive family protein contains Pfam profile: PF04588 hypoxia induced protein conserved region 6 1 12 14 At3g07990 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase II (CP-MII) GB:CAA70815 [Hordeum vulgare] 6 1 12 15 At3g08030 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 6 1 12 16 At3g08630 expressed protein 6 1 12 17 At3g08690 "ubiquitin-conjugating enzyme 11 (UBC11) E2; identical to gi:12643427, SP:P35134" 6 1 12 18 At3g08870 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 6 1 12 19 At3g08920 rhodanese-like domain-containing protein contains rhodanese-like domain PF:00581 6 1 12 20 At3g09035 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 6 1 12 21 At3g09085 expressed protein 6 1 12 22 At3g11560 expressed protein 6 1 12 23 At3g11620 expressed protein similar to unknown protein GB:AAF00672 (Arabidopsis thaliana) 6 1 12 24 At3g11770 expressed protein 6 1 12 25 At3g11820 "syntaxin 121 (SYP121) / syntaxin-related protein (SYR1) contains Pfam profiles: PF00804 syntaxin and PF05739: SNARE domain; identical to cDNA syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788, SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 6 1 13 1 At3g11940 40S ribosomal protein S5 (RPS5B) similar to 40S ribosomal protein S5 GB:AAC98068 GI:4056502 from [Arabidopsis thaliana] 6 1 13 2 At3g11980 male sterility protein 2 (MS2) identical to male sterility protein 2 (MS2) SP:Q08891 (Arabidopsis thaliana) 6 1 13 3 At3g12130 KH domain-containing protein / zinc finger (CCCH type) family protein 6 1 13 4 At3g12180 cornichon family protein contains Pfam profile: PF03311 cornichon protein 6 1 13 5 At3g14595 expressed protein 6 1 13 6 At3g14650 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 6 1 13 7 At3g14830 expressed protein 6 1 13 8 At3g14850 expressed protein 6 1 13 9 At3g14990 "4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative supporting cDNA gi|11908017|gb|AF326856.1|; contains Pfam profile PF01965:DJ-1/PfpI family; identical to cDNA EST Athsr7 GI:5281061" 6 1 13 10 At3g15030 "TCP family transcription factor, putative similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]" 6 1 13 11 At3g15180 proteasome-related similar to 26S proteasome non-ATPase regulatory subunit 5 (26S proteasome subunit S5B) (26S protease subunit S5 basic) (Swiss-Prot:Q16401) [Homo sapiens] 6 1 13 12 At3g15240 expressed protein 6 1 13 13 At3g17810 dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family protein low similarity to SP|Q12882 Dihydropyrimidine dehydrogenase [NADP+] precursor (EC 1.3.1.2) (DPD) (DHPDHase) (Dihydrouracil dehydrogenase) (Dihydrothymine dehydrogenase) {Homo sapiens}; contains Pfam profile PF01180: Dihydroorotate dehydrogenase 6 1 13 14 At3g17860 expressed protein 6 1 13 15 At3g18060 "transducin family protein / WD-40 repeat family protein similar to 66 kDa stress protein (SP:P90587) [Physarum polycephalum (Slime mold)]; similar to WDR1 protein GB:AAD05042 [Gallus gallus] (Genomics 56 (1), 59-69 (1999)); contains 11 WD-40 repeats (PF00400)" 6 1 13 16 At3g18120 "F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]" 6 1 13 17 At3g18260 reticulon family protein (RTNLB9) weak similarity to RTN2-C [Homo sapiens] GI:3435090; contains Pfam profile PF02453: Reticulon 6 1 13 18 At3g18310 expressed protein 6 1 13 19 At3g18470 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 6 1 13 20 At3g18520 histone deacetylase family protein similar to SP|P53973 Histone deacetylase HDA1 {Saccharomyces cerevisiae}; contains Pfam profile PF00850: Histone deacetylase family; AT-acceptor splice site at intron 7 6 1 13 21 At3g21210 "universal stress protein (USP) family protein / DC1 domain-containing protein contains Pfam profiles PF03107: DC1 domain, PF00582: universal stress protein family" 6 1 13 22 At3g21260 glycolipid transfer protein-related contains weak similarity to Glycolipid transfer protein (GLTP) (Swiss-Prot:P17403) [Sus scrofa] 6 1 13 23 At3g21430 expressed protein 6 1 13 24 At3g21490 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 6 1 13 25 At3g21630 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 14 1 At3g21690 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 MatE uncharacterized membrane protein family 6 1 14 2 At3g21820 SET domain-containing protein contains Pfam profile PF00856: SET domain 6 1 14 3 At3g21870 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 6 1 14 4 At3g24580 F-box family protein contains F-box domain Pfam:PF00646 6 1 14 5 At3g24640 hypothetical protein 6 1 14 6 At3g24810 kip-related protein 5 (KRP5) / cyclin-dependent kinase inhibitor 5 (ICK5) identical to cyclin-dependent kinase inhibitor 5 (krp5) [Arabidopsis thaliana] GI:14422293 6 1 14 7 At3g24870 expressed protein 6 1 14 8 At3g25130 expressed protein 6 1 14 9 At3g25180 cytochrome P450 family protein similar to cytochrome P450 monooxygenase GB:AAC49188 [Pisum sativum]; contains Pfam profile: PF00067 cytochrome P450 6 1 14 10 At3g25440 group II intron splicing factor CRS1-related contains weak similarity to CRS1 [Zea mays] gi|9837550|gb|AAG00595 6 1 14 11 At3g25510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 1 14 12 At3g28130 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 6 1 14 13 At3g28155 hypothetical protein weak similarity to microtubule organization 1 protein [Arabidopsis thaliana] GI:14317953 6 1 14 14 At3g28345 "ABC transporter family protein similar to P-glycoprotein [Arabidopsis thaliana] GI:3849833; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 6 1 14 15 At3g28410 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 6 1 14 16 At3g28580 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 6 1 14 17 At3g28640 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 1 14 18 At3g28820 expressed protein ; expression supported by MPSS 6 1 14 19 At3g28870 hypothetical protein 6 1 14 20 At3g42640 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H+-ATPase from [Lycopersicon esculentum] GI:1621440, [Solanum tuberosum] GI:435001, SP|Q03194 {Nicotiana plumbaginifolia}; contains InterPro accession IPR001757: ATPase, E1-E2 type" 6 1 14 21 At3g42722 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 1 14 22 At3g42880 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase PRK1, Lycopersicon esculentum, PIR:T07865" 6 1 14 23 At3g42970 hypothetical protein 6 1 14 24 At3g43260 "hypothetical protein predicted protein, Arabidopsis thaliana" 6 1 14 25 At3g43330 hypothetical protein putative proteins - Arabidopsis thaliana 6 1 15 1 At3g43528 hypothetical protein 6 1 15 2 At3g43570 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 6 1 15 3 At3g46530 "disease resistance protein, RPP13-like (CC-NBS class), putative domain signature CC-NBS exists, suggestive of a disease resistance protein. Closest homolog in Col-0 to RPP13." 6 1 15 4 At3g46590 "telomere repeat-binding protein, putative similar to telomere repeat-binding protein TRP1 [Arabidopsis thaliana] gi|5459298|emb|CAB50690" 6 1 15 5 At3g46770 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 6 1 15 6 At3g46830 "Ras-related protein (RAB11A) / small GTP-binding protein, putative identical to SP|Q96283 Ras-related protein Rab11A {Arabidopsis thaliana}; identical to cDNA Rab11 protein GI:2598228" 6 1 15 7 At3g47010 "glycosyl hydrolase family 3 protein beta-D-glucan exohydrolase, Nicotiana tabacum, TREMBL:AB017502_1" 6 1 15 8 At3g47070 expressed protein 6 1 15 9 At3g47250 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 6 1 15 10 At3g47295 expressed protein 6 1 15 11 At3g50080 F-box family protein (FBL16) contains similarity to SKP1 interacting partner 2 GI:10716949 from [Arabidopsis thaliana]; contains Pfam profile: PF00646 F-box domain 6 1 15 12 At3g50140 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 6 1 15 13 At3g50310 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 6 1 15 14 At3g50370 expressed protein 6 1 15 15 At3g50540 hypothetical protein 6 1 15 16 At3g50580 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 1 15 17 At3g50760 glycosyl transferase family 8 protein contains Pfam profile: PF01501 Glycosyl transferase family 8 6 1 15 18 At3g50820 "oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putative (PSBO2) identical to SP:Q9S841 Oxygen-evolving enhancer protein 1-2, chloroplast precursor (OEE1) [Arabidopsis thaliana]; strong similarity to SP|P23321 Oxygen-evolving enhancer protein 1-1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) {Arabidopsis thaliana}" 6 1 15 19 At3g53430 "60S ribosomal protein L12 (RPL12B) 60S RIBOSOMAL PROTEIN L12, Prunus armeniaca, SWISSPROT:RL12_PRUAR" 6 1 15 20 At3g53460 "29 kDa ribonucleoprotein, chloroplast / RNA-binding protein cp 29 nearly identical to SP|Q43349 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29) {Arabidopsis thaliana}" 6 1 15 21 At3g53600 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 1 15 22 At3g53640 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 15 23 At3g53790 "telomere-binding protein, putative similar to telomere binding protein TBP1 [Nicotiana glutinosa] gi|23664357|gb|AAN39330" 6 1 15 24 At3g53850 "expressed protein hypothetical protein - Arabidopsis thaliana, EMBL:AC006283.5 ; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 6 1 15 25 At3g53980 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 6 1 16 1 At3g54010 "peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative / pasticcino 1-D (PAS1-D) nearly identical to pasticcino 1-D [Arabidopsis thaliana] GI:3080740" 6 1 16 2 At3g56790 RNA splicing factor-related contains weak similarity to U4/U6-associated RNA splicing factor [Homo sapiens] gi|2853287|gb|AAC09069 6 1 16 3 At3g56850 ABA-responsive element-binding protein 3 (AREB3) identical to ABA-responsive element binding protein 3 (AREB3) [Arabidopsis thaliana] GI:9967421 6 1 16 4 At3g57020 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324] 6 1 16 5 At3g57080 "eukaryotic rpb5 RNA polymerase subunit family protein similar to SP|P19388 DNA-directed RNA polymerase II 23 kDa polypeptide (EC 2.7.7.6) {Homo sapiens}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 6 1 16 6 At3g57260 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase, acidic isoform precursor SP:P33157 from [Arabidopsis thaliana]" 6 1 16 7 At3g57320 expressed protein 6 1 16 8 At3g57460 expressed protein weak similarity to SP|O43847 Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic convertase) {Homo sapiens} 6 1 16 9 At3g57520 "alkaline alpha galactosidase, putative similar to alkaline alpha galactosidase II [Cucumis melo] GI:29838631; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1" 6 1 16 10 At3g60280 uclacyanin 3 (UCC3) identical to uclacyanin 3 GI:3395770 from [Arabidopsis thaliana]; contains Pfam profile PF02298: Plastocyanin-like domain; identical to cDNA uclacyanin 3 (UCC3)GI:3395769 6 1 16 11 At3g60340 "palmitoyl protein thioesterase family protein palmitoyl-protein thioesterase precursor, Mus musculus, EMBL:AF071025" 6 1 16 12 At3g60500 "3' exoribonuclease family protein similar to SP|Q06265 Exosome complex exonuclease RRP45 [Homo sapiens]; contains Pfam profiles PF01138: 3' exoribonuclease family, domain 1, PF03725: 3' exoribonuclease family, domain 2" 6 1 16 13 At3g60540 sec61beta family protein similar to SP|P52870 Protein transport protein SEC61 beta 1 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF03911: Sec61beta family 6 1 16 14 At3g60720 "receptor-like protein kinase-related contains Pfam PF01657: Domain of unknown function, duplicated in 33kDa secretory proteins; weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]" 6 1 16 15 At3g60780 expressed protein 6 1 16 16 At3g60940 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 6 1 16 17 At3g61010 "glycosyl hydrolase family protein 85 hypothetical protein F9F8.14 - Arabidopsis thaliana, EMBL:AC009991" 6 1 16 18 At4g00150 scarecrow-like transcription factor 6 (SCL6) 6 1 16 19 At4g00200 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 6 1 16 20 At4g00320 F-box family protein contains F-box domain Pfam:PF00646 6 1 16 21 At4g00350 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554 Uncharacterized membrane protein family 6 1 16 22 At4g00460 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 6 1 16 23 At4g00525 expressed protein 6 1 16 24 At4g00640 hypothetical protein 6 1 16 25 At4g00680 "actin-depolymerizing factor, putative strong similarity to SP|P30175 Actin-depolymerizing factor (ADF) {Lilium longiflorum}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 6 1 17 1 At4g03165 hypothetical protein 6 1 17 2 At4g03205 "coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative " 6 1 17 3 At4g03340 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 6 1 17 4 At4g03400 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 6 1 17 5 At4g03540 "integral membrane family protein similar to F21B7.5, GenBank accession number AC002560; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588)" 6 1 17 6 At4g03590 hypothetical protein 6 1 17 7 At4g03950 "glucose-6-phosphate/phosphate translocator, putative similar to glucose-6-phosphate/phosphate-translocator precursor [Pisum sativum] gi|2997591|gb|AAC08525" 6 1 17 8 At4g03979 hypothetical protein 6 1 17 9 At4g08750 "RNA recognition motif (RRM)-containing protein contains Pfam domain PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 6 1 17 10 At4g08810 expressed protein 6 1 17 11 At4g08950 "phosphate-responsive protein, putative (EXO) similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region" 6 1 17 12 At4g09020 "isoamylase, putative / starch debranching enzyme, putative similar to isoamylase isoform 3 [Solanum tuberosum] GI:27728149, isoamylase [Oryza sativa] GI:3252794; contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain" 6 1 17 13 At4g09210 hypothetical protein 6 1 17 14 At4g09300 expressed protein 6 1 17 15 At4g09500 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 1 17 16 At4g09550 expressed protein 6 1 17 17 At4g12310 "cytochrome P450, putative similar to P450 monooxygenase GI:14334057 from [Gossypium arboreum ]" 6 1 17 18 At4g12370 hypothetical protein 6 1 17 19 At4g12530 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 6 1 17 20 At4g12580 expressed protein predicted protein 6 1 17 21 At4g12760 expressed protein ; expression supported by MPSS 6 1 17 22 At4g12810 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 6 1 17 23 At4g12990 expressed protein 6 1 17 24 At4g13050 "acyl-[acyl carrier protein] thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-[acyl-carrier protein] hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative strong similarity to acyl-ACP thioesterase; oleoyl-[acyl-carrier protein] hydrolase [Brassica napus] GI:435011; contains Pfam profile PF01643: Acyl-ACP thioesterase" 6 1 17 25 At4g15417 ribonuclease III family protein similar to CAF protein (RNA helicase/RNAseIII) [Arabidopsis thaliana] GI:6102610; contains Pfam profile PF00636 RNase3 domain 6 1 18 1 At4g15470 expressed protein low similarity to N-methyl-D-aspartate receptor-associated protein [Drosophila melanogaster] GI:567104; contains Pfam profile PF01027: Uncharacterized protein family UPF0005 6 1 18 2 At4g15630 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 6 1 18 3 At4g15690 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 6 1 18 4 At4g15820 wound-responsive protein-related contains weak similarity to KED [Nicotiana tabacum] gi|8096269|dbj|BAA95789 6 1 18 5 At4g15885 kinesin motor protein-related similar to kinesin heavy chain (GI:15208461) [Zea mays]; similar to BY-2 kinesin-like protein 10 (GI:13536983) [Nicotiana tabacum] 6 1 18 6 At4g16045 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 6 1 18 7 At4g16095 disease resistance protein-related contains weak similarity to rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631 6 1 18 8 At4g18550 lipase class 3 family protein similar to lipase [Dianthus caryophyllus] GI:4103627; contains Pfam profile PF01764: Lipase 6 1 18 9 At4g18593 dual specificity protein phosphatase-related contains weak similarity to Dual specificity protein phosphatase 12 (EC 3.1.3.48) (EC 3.1.3.16) (Dual-specificity tyrosine phosphatase YVH1) (Swiss-Prot:Q9UNI6) [Homo sapiens] 6 1 18 10 At4g18740 expressed protein 6 1 18 11 At4g18800 Ras-related GTP-binding family protein similar to ras-related GTP binding protein RIC2 SP:P40393 from [Oryza sativa]; contains Pfam profile: PF00071 Ras family 6 1 18 12 At4g18970 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 6 1 18 13 At4g19003 expressed protein contains Pfam PF05871: Eukaryotic protein of unknown function (DUF852) 6 1 18 14 At4g19130 replication protein-related similar to replication protein A 70kDa [Oryza sativa] GI:13536993; contains Pfam profile PF00098: Zinc knuckle 6 1 18 15 At4g19180 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to SP|O18956 Ectonucleoside triphosphate diphosphohydrolase 1 (EC 3.6.1.5) (Ecto-apyrase) {Bos taurus}; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 6 1 18 16 At4g22010 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 6 1 18 17 At4g22090 pectate lyase family protein similar to pectate lyase 2 GP:6606534 from [Musa acuminata] 6 1 18 18 At4g22217 hypothetical protein 6 1 18 19 At4g22240 "plastid-lipid associated protein PAP, putative similar to plastid-lipid associated proteins PAP2 [Brassica rapa] GI:14248550 GI:14248556; contains Pfam profile PF04755: PAP_fibrillin" 6 1 18 20 At4g22380 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 6 1 18 21 At4g22440 hypothetical protein 6 1 18 22 At4g22630 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family 6 1 18 23 At4g22690 "cytochrome P450 family protein flavonoid 3',5'-hydroxylase Hf1, Petunia x hybrida, PIR2:S38985" 6 1 18 24 At4g25250 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 6 1 18 25 At4g25300 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Petunia x hybrida][GI:311658], anthocyanidin synthase [Torenia fournieri][GI:12583673]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 6 1 19 1 At4g25434 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 6 1 19 2 At4g25500 arginine/serine-rich splicing factor RSP40 (RSP40) identical to SP|P92965 Arginine/serine-rich splicing factor RSP40 {Arabidopsis thaliana} 6 1 19 3 At4g25660 expressed protein 6 1 19 4 At4g25700 beta-carotene hydroxylase identical to GI:1575296 6 1 19 5 At4g25870 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 6 1 19 6 At4g25930 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 6 1 19 7 At4g28440 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 6 1 19 8 At4g28490 "leucine-rich repeat transmembrane protein kinase, putative " 6 1 19 9 At4g28650 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase 5, Arabidopsis thaliana, PIR1:S27756" 6 1 19 10 At4g28703 expressed protein 6 1 19 11 At4g28850 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative contains similarity to xyloglucan endotransglycosylase XET2 GI:8886867 from [Asparagus officinalis]" 6 1 19 12 At4g28920 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 6 1 19 13 At4g29090 "reverse transcriptase, putative / RNA-dependent DNA polymerase, putative similar to reverse transcriptase [Arabidopsis thaliana] GI:976278; contains Pfam profile PF00075: RNase H" 6 1 19 14 At4g29150 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 6 1 19 15 At4g31720 transcription initiation factor IID (TFIID) 23-30kDa subunit (TAF2H) family protein contains Pfam profile: PF03540 transcription initiation factor TFIID 23-30kDa 6 1 19 16 At4g31760 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781338|emb|CAA71496" 6 1 19 17 At4g31877 expressed protein 6 1 19 18 At4g31930 mitochondrial glycoprotein family protein / MAM33 family protein similar to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 6 1 19 19 At4g32070 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein similar to SP|Q99614 Tetratricopeptide repeat protein 1 {Homo sapiens}; contains Pfam profiles PF00564: PB1 domain, PF00515: TPR Domain" 6 1 19 20 At4g32120 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 6 1 19 21 At4g32295 expressed protein 6 1 19 22 At4g32360 NADP adrenodoxin-like ferredoxin reductase identical to NADP adrenodoxin-like ferredoxin reductase GI:28192433 from [Arabidopsis thaliana] 6 1 19 23 AT5G57480 PC-1 A07 6 1 19 24 3XSSC PC-1 A19 6 1 19 25 AT1G29930 PC-1 E07 6 1 20 1 3XSSC PC-1 E19 6 1 20 2 AT3G44150 PC-1 I07 6 1 20 3 3XSSC PC-1 I19 6 1 20 4 AT4G00810 PC-1 M07 6 1 20 5 3XSSC PC-1 M19 6 1 20 6 At4g34900 "xanthine dehydrogenase, putative similar to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH [SP|P47990], from Calliphora vicina [SP|P08793]; contains Pfam profile PF02738 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain" 6 1 20 7 At4g34960 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401" 6 1 20 8 At4g35110 expressed protein 6 1 20 9 At4g35165 hypothetical protein 6 1 20 10 At4g35310 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 6 [Arabidopsis thaliana] gi|1399275|gb|AAB03246; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 6 1 20 11 At4g35360 "pantothenate kinase family protein contains Pfam domain, PF01937: Protein of unknown function; similar to SP|Q9NVE7 Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid kinase 4) (hPanK4) {Homo sapiens}" 6 1 20 12 At4g35500 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 6 1 20 13 At4g35560 expressed protein 6 1 20 14 At4g38220 "aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative similar to aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase, ACY-1)[Homo sapiens] SWISS-PROT:Q03154" 6 1 20 15 At4g38240 "alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative similar to N-acetylglucosaminyltransferase I from Arabidopsis thaliana [gi:5139335]; contains AT-AC non-consensus splice sites at intron 13" 6 1 20 16 At4g38410 "dehydrin, putative similar to dehydrin ERD10 (Low-temperature-induced protein LTI45) [Arabidopsis thaliana] SWISS-PROT:P42759" 6 1 20 17 At4g38480 "transducin family protein / WD-40 repeat family protein contains contains Pfam PF00400: WD domain, G-beta repeat (7 copies, 3 weak);similar to gene PC326 protein - mouse, PIR2:S37694" 6 1 20 18 At4g38640 choline transporter-related contains weak similarity to CD92 protein [Homo sapiens] gi|16945323|emb|CAC82175 6 1 20 19 At4g38700 disease resistance-responsive family protein related to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669G 6 1 20 20 At4g38880 "amidophosphoribosyltransferase, putative / glutamine phosphoribosylpyrophosphate amidotransferase, putative / phosphoribosyldiphosphate 5-amidotransferase, putative similar to amidophosphoribosyltransferase [Arabidopsis thaliana] GI:469195; contains Pfam profiles PF00156: Phosphoribosyl transferase domain, PF00310: Glutamine amidotransferases class-II" 6 1 20 21 At4g38920 vacuolar ATP synthase 16 kDa proteolipid subunit 3 / V-ATPase 16 kDa proteolipid subunit 3 (AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}; contains Pfam profile PF00137: ATP synthase subunit C 6 1 20 22 At5g02330 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 1 20 23 At5g02390 expressed protein ; expression supported by MPSS 6 1 20 24 At5g02540 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 6 1 20 25 At5g02580 expressed protein 6 1 21 1 At5g02740 expressed protein 6 1 21 2 At5g02780 "In2-1 protein, putative similar to In2-1 [Zea mays] EMBL:X58573" 6 1 21 3 At5g02940 expressed protein 6 1 21 4 At5g03000 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 1 21 5 At5g05680 nuclear pore complex protein-related contains weak similarity to Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex protein) (Swiss-Prot:Q99567) [Homo sapiens] 6 1 21 6 At5g05740 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains Pfam PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 6 1 21 7 At5g05900 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 1 21 8 At5g05940 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 6 1 21 9 At5g06100 myb family transcription factor (MYB33) contains Pfam profile: PF00249 myb DNA-binding domain 6 1 21 10 At5g06130 chaperone protein dnaJ-related similar to unknown protein (pir||T00468); contains Pfam PF00684 : DnaJ central domain (4 repeats) 6 1 21 11 At5g06270 expressed protein 6 1 21 12 At5g06320 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein / NDR1/HIN1-like protein 3 similar to harpin-induced protein hin1 (GI:1619321)[Nicotiana tabacum] 6 1 21 13 At5g09400 "potassium transporter family protein similar to K+ transporter HAK5 [Arabidopsis thaliana] GI:7108597; contains Pfam profile PF02705: K+ potassium transporter; KUP/HAK/KT Transporter family member, PMID:11500563; Note: possible sequencing error causes a frameshift in the 4th exon|15810448|gb|AY056263" 6 1 21 14 At5g09460 expressed protein 6 1 21 15 At5g09640 "sinapoylglucose:choline sinapoyltransferase (SNG2) GC donor splice site at exon 11 and 13; TA donor splice site at exon 10; similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; wound-inducible carboxypeptidase, Lycopersicon esculentum, EMBL:AF242849; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:choline sinapoyltransferase (SNG2) GI:15418806" 6 1 21 16 At5g09690 "magnesium transporter CorA-like family protein (MRS2-7) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 6 1 21 17 At5g09870 "cellulose synthase, catalytic subunit, putative similar to gi:2827141 cellulose synthase catalytic subunit (Ath-A), Arabidopsis thaliana" 6 1 21 18 At5g09910 GTP-binding protein-related contains weak similarity to GTP-binding protein yptV3. (Swiss-Prot:P36862) [Volvox carteri] 6 1 21 19 At5g10060 expressed protein 6 1 21 20 At5g10100 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 6 1 21 21 At5g13240 "expressed protein prdeicted proteins, Schizosaccharomyces pombe" 6 1 21 22 At5g13290 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 1 21 23 At5g13460 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 6 1 21 24 At5g13500 "expressed protein predicted protein At2g25260 - Arabidopsis thaliana, EMBL:AC007070" 6 1 21 25 At5g13655 hypothetical protein 6 1 22 1 At5g13710 "sterol 24-C-methyltransferase, putative similar to SP:P25087 Sterol 24-C-methyltransferase, Delta(24)-sterol C- methyltransferase, Saccharomyces cerevisiae" 6 1 22 2 At5g13870 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (EXGT-A4) identical to endoxyloglucan transferase EXGT-A4 GI:5533315 from [Arabidopsis thaliana] 6 1 22 3 At5g13930 chalcone synthase / naringenin-chalcone synthase identical to SP|P13114 6 1 22 4 At5g16690 origin recognition complex subunit 3-related / ORC3-related low similarity to SP|Q9UBD5 Origin recognition complex subunit 3 (Origin recognition complex subunit Latheo) {Homo sapiens} 6 1 22 5 At5g16740 "amino acid transporter family protein low similarity to lysosomal amino acid transporter 1 [Rattus norvegicus] GI:14571904; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 6 1 22 6 At5g16880 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate [Homo sapiens] GI:2731383; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 6 1 22 7 At5g16930 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 6 1 22 8 At5g17100 hypothetical protein 6 1 22 9 At5g17160 expressed protein 6 1 22 10 At5g17310 "UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative strong similarity to SP|P19595 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum}; contains Pfam profile PF01704: UTP--glucose-1-phosphate uridylyltransferase" 6 1 22 11 At5g17370 "WD-40 repeat family protein contains 1 significant, 2 weak WD-40 repeats (PF00400); similar to transducin beta-like 1 protein.(SP:O60907) [Homo sapiens]" 6 1 22 12 At5g19950 expressed protein 6 1 22 13 At5g19990 26S proteasome AAA-ATPase subunit (RPT6a) 6 1 22 14 At5g20150 SPX (SYG1/Pho81/XPR1) domain-containing protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profile PF03105: SPX domain 6 1 22 15 At5g20180 ribosomal protein L36 family protein contains Pfam profile: PF00444 ribosomal protein L36 6 1 22 16 At5g20360 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein contains Pfam profiles PF00564: PB1 domain, PF00515: TPR Domain" 6 1 22 17 At5g20420 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional regulator ATRX homolog {Caenorhabditis elegans}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 6 1 22 18 At5g20590 "expressed protein various predicted proteins, Arabidopsis thaliana" 6 1 22 19 At5g20640 hypothetical protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 6 1 22 20 At5g23940 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 6 1 22 21 At5g24000 expressed protein contains Pfam profile PF05684: Protein of unknown function (DUF819) 6 1 22 22 At5g24160 "squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) identical to SP|O65402" 6 1 22 23 At5g24210 lipase class 3 family protein contains Pfam profile PF01764: Lipase 6 1 22 24 At5g24320 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 6 1 22 25 At5g24370 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 6 1 23 1 At5g24550 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 6 1 23 2 At5g24590 "turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC2 (GI:6456751) {Arabidopsis thaliana}; identical to cDNA TIP mRNA, GI:9408600" 6 1 23 3 At5g27530 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 6 1 23 4 At5g27590 hypothetical protein 6 1 23 5 At5g27760 hypoxia-responsive family protein contains Pfam profile: PF04588 hypoxia induced protein conserved region 6 1 23 6 At5g27820 ribosomal protein L18 family protein similar to SP|P52863 50S ribosomal protein L18 [Aeromonas proteolytica] {Vibrio proteolyticus} 6 1 23 7 At5g27970 expressed protein 6 1 23 8 At5g28030 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to O-acetylserine(thiol) lyase [Brassica juncea] GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 6 1 23 9 At5g28235 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; simlar to At4g08430, At5g45570" 6 1 23 10 At5g28290 "protein kinase, putative similar to LSTK-1-like kinase [Lycopersicon esculentum] GI:15637110; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 6 1 23 11 At5g36210 expressed protein 6 1 23 12 At5g36270 "dehydroascorbate reductase, putative similar to dehydroascorbate reductase {Spinacia oleracea} gi:10952511 gb:AF195783, PMID:11148269" 6 1 23 13 At5g36810 hypothetical protein 6 1 23 14 At5g36890 "glycosyl hydrolase family 1 protein pcontains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina]; prunasin hydrolase isoform PHA precursor, Prunus serotina, EMBL:AF221526" 6 1 23 15 At5g37055 zinc finger (HIT type) family protein contains Pfam profile: PF04438 HIT zinc finger 6 1 23 16 At5g37110 hypothetical protein 6 1 23 17 At5g37280 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 6 1 23 18 At5g37350 "RIO1 family protein similar to extragenic suppressor of the bimD6 mutation (SUDD) [Emericella nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae] GI:1359602; contains Pfam profile PF01163: RIO1 family" 6 1 23 19 At5g40200 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 6 1 23 20 At5g40260 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 6 1 23 21 At5g40440 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK3) similar to NPK2 [Nicotiana tabacum] gi|862342|dbj|BAA06731; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 6 1 23 22 At5g40500 expressed protein 6 1 23 23 At5g40630 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 6 1 23 24 At5g40680 kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif 6 1 23 25 At5g40855 hypothetical protein 6 1 24 1 At5g40910 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Non-consensus TT donor splice site at exon 1" 6 1 24 2 At5g43590 "patatin, putative similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734" 6 1 24 3 At5g43650 basic helix-loop-helix (bHLH) family protein similar to unknown protein (pir||T04030) 6 1 24 4 At5g43830 "expressed protein similar to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 6 1 24 5 At5g43890 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana; contains Pfam profile PF00743" 6 1 24 6 At5g44020 "acid phosphatase class B family protein similar to SP|P15490 STEM 28 kDa glycoprotein precursor (Vegetative storage protein A) {Glycine max}, acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase" 6 1 24 7 At5g44080 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 6 1 24 8 At5g44250 expressed protein contains Pfam PF05705: Eukaryotic protein of unknown function (DUF829) 6 1 24 9 At5g44310 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to 51 kDa seed maturation protein [Glycine max] GI:414977; contains Pfam profile PF02987: Late embryogenesis abundant protein 6 1 24 10 At5g46810 expressed protein contains similarity to carboxyl-terminal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function 6 1 24 11 At5g46870 RNA recognition motif (RRM)-containing protein similar to unknown protein (pir||C71447) 6 1 24 12 At5g47030 "ATP synthase delta' chain, mitochondrial identical to SP|Q96252 ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}; contains Pfam profile PF02823: ATP synthase, Delta/Epsilon chain, beta-sandwich domain" 6 1 24 13 At5g47080 "casein kinase II beta chain, putative similar to casein kinase II beta chain (CK II) [Arabidopsis thaliana] SWISS-PROT:P40228" 6 1 24 14 At5g47230 ethylene-responsive element-binding factor 5 (ERF5) identical to SP|O80341 Ethylene responsive element binding factor 5 (AtERF5) [Arabidopsis thaliana] 6 1 24 15 At5g47290 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 6 1 24 16 At5g47450 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 6 1 24 17 At5g47455 expressed protein 6 1 24 18 At5g50110 methyltransferase-related contains weak similarity to Methyltransferase gidB (EC 2.1.-.-) (Glucose inhibited division protein B). (Swiss-Prot:Q93D95) [Streptococcus mutans] 6 1 24 19 At5g50160 ferric reductase-like transmembrane component family protein contains Pfam profile PF01794: Ferric reductase like transmembrane component 6 1 24 20 At5g50320 "radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profiles PF00583: acetyltransferase, GNAT family, PF04055: Radical SAM superfamily" 6 1 24 21 At5g50370 "adenylate kinase, putative similar to adenylate kinase (ATP-AMP transphosphorylase) [Arabidopsis thaliana] SWISS-PROT:O82514" 6 1 24 22 At5g50540 expressed protein 6 1 24 23 At5g50590 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 6 1 24 24 At5g50800 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 6 1 24 25 At5g50840 expressed protein 6 1 25 1 At5g53570 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 6 1 25 2 At5g53640 F-box family protein contains F-box domain Pfam:PF00646 6 1 25 3 At5g53820 "expressed protein similar to ABA-inducible protein [Fagus sylvatica] GI:3901016, cold-induced protein kin1 [Brassica napus] GI:167146" 6 1 25 4 At5g53860 expressed protein 6 1 25 5 At5g54010 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 1 25 6 At5g54062 hypothetical protein 6 1 25 7 At5g54200 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 6 1 25 8 At5g54260 DNA repair and meiosis protein (Mre11) identical to DNA repair and meiosis protein (Mre11) GI:5524769 from [Arabidopsis thaliana] 6 1 25 9 At5g56980 "expressed protein non-consensus CG donor splice site at exon 1, GA donor splice site at exon 3" 6 1 25 10 At5g57030 lycopene epsilon cyclase identical to lycopene epsilon cyclase [GI:1399181] 6 1 25 11 At5g57150 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 1 25 12 At5g57190 "phosphatidylserine decarboxylase, putative similar to SP|P53037 Phosphatidylserine decarboxylase proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces cerevisiae}; contains Pfam profile PF02666: phosphatidylserine decarboxylase" 6 1 25 13 At5g57350 "ATPase 3, plasma membrane-type / proton pump 3 nearly identical to SP|P20431 ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3) {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type" 6 1 25 14 At5g57410 expressed protein 6 1 25 15 At5g57580 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 6 1 25 16 At5g57630 "CBL-interacting protein kinase 21, putative (CIPK21) identical to CBL-interacting protein kinase 21 [Arabidopsis thaliana] gi|14334390|gb|AAK59696" 6 1 25 17 At5g60170 RNA recognition motif (RRM)-containing protein low similarity to transcriptional repressor Not4-Np [Homo sapiens] GI:6856207; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) 6 1 25 18 At5g60230 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 6 1 25 19 At5g60390 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] 6 1 25 20 At5g60410 "DNA-binding family protein contains Pfam profiles: PF02037 SAP domain, PF02891 MIZ zinc finger, PF00628 PHD-finger" 6 1 25 21 At5g60590 yrdC protein-related 6 1 25 22 At5g60620 phospholipid/glycerol acyltransferase family protein contains Pfam PF01553: Acyltransferase 6 1 25 23 At5g60780 "high-affinity nitrate transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 6 1 25 24 At5g60840 "expressed protein predicted protein, Drosophila melanogaster" 6 1 25 25 At5g63520 F-box family protein similar to unknown protein (pir||S76033) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 1 26 1 At5g63580 "flavonol synthase, putative similar to SP|Q96330; contains PF03171 2OG-Fe(II) oxygenase superfamily" 6 1 26 2 At5g63750 "IBR domain-containing protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam:PF01485 IBR domain" 6 1 26 3 At5g63810 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase GI:7939621 from [Lycopersicon esculentum]; contains Pfam profile PF01301: Glycosyl hydrolases family 35" 6 1 26 4 At5g63970 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 6 1 26 5 At5g64010 expressed protein 6 1 26 6 At5g64180 expressed protein 6 1 26 7 At5g64220 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from[Nicotiana tabacum] 6 1 26 8 At5g66630 LIM domain-containing protein contains low similarity to Pfam profile PF00412: LIM domain 6 1 26 9 At5g66680 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein similar to SP|Q05052 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) {Canis familiaris}; contains Pfam profile PF03345: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kD subunit 6 1 26 10 At5g66830 F-box family protein contains F-box domain Pfam:PF00646 6 1 26 11 At5g66890 "disease resistance protein (CC-NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 6 1 26 12 At5g67030 "zeaxanthin epoxidase (ZEP) (ABA1) identical to GI:9857296 AtABA1; controls Pfam profiles PF01360: Monooxygenase and PF00498: FHA domain; identical to cDNA AtABA1, GI:9857295" 6 1 26 13 At5g67090 subtilase family protein contains similarity to subtilisin-like protease ag12 GI:757522 from [Alnus glutinosa] 6 1 26 14 At5g67245 expressed protein 6 1 26 15 At5g67300 myb family transcription factor contains PFAM profile: myb DNA binding domain PF00249 6 1 26 16 At3g42640 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H+-ATPase from [Lycopersicon esculentum] GI:1621440, [Solanum tuberosum] GI:435001, SP|Q03194 {Nicotiana plumbaginifolia}; contains InterPro accession IPR001757: ATPase, E1-E2 type" 6 1 26 17 At3g42722 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 1 26 18 At3g42880 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase PRK1, Lycopersicon esculentum, PIR:T07865" 6 1 26 19 At3g42970 hypothetical protein 6 1 26 20 At3g43260 "hypothetical protein predicted protein, Arabidopsis thaliana" 6 1 26 21 At3g43330 hypothetical protein putative proteins - Arabidopsis thaliana 6 1 26 22 At3g43528 hypothetical protein 6 1 26 23 At3g43570 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 6 1 26 24 Blank Blank 6 1 26 25 Blank Blank 6 2 1 1 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 6 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 6 2 1 3 Alien3 Control: Stratagene Spotreport Alien Oligo 6 2 1 4 Alien9 Control: Stratagene Spotreport Alien Oligo 6 2 1 5 atc05 Randomly generated negative control 6 2 1 6 atc11 Randomly generated negative control 6 2 1 7 At5g46430 60S ribosomal protein L32 (RPL32B) 6 2 1 8 atc01 Randomly generated negative control 6 2 1 9 At1g03457 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 6 2 1 10 At1g03520 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile PF02485: Core-2/I-Branching enzyme 6 2 1 11 At1g03710 expressed protein 6 2 1 12 At1g03770 "zinc finger (C3HC4-type RING finger) family protein low similarity to polycomb-M33 interacting protein Ring1B [Mus musculus] GI:2239142; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 6 2 1 13 At1g03900 expressed protein 6 2 1 14 At1g03950 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 6 2 1 15 At1g04110 subtilase family protein contains similarity to subtilisin-like protease GI:3687307 from [Lycopersicon esculentum] 6 2 1 16 At1g04150 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 6 2 1 17 At1g06800 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 6 2 1 18 At1g06850 "bZIP transcription factor, putative contains Pfam profile: PF00170 bZIP transcription factor" 6 2 1 19 At1g07025 mitochondrial substrate carrier family protein contains similarity to mitochondrial carrier proteins 6 2 1 20 At1g07080 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 6 2 1 21 At1g07260 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 2 1 22 At1g07320 "50S ribosomal protein L4, chloroplast (CL4) identical to SP:O50061 from [Arabidopsis thaliana]" 6 2 1 23 At1g07440 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 6 2 1 24 At1g07480 transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) identical to transcription factor IIA large subunit GI:2826884 from [Arabidopsis thaliana] 6 2 1 25 At1g09960 sucrose transporter / sucrose-proton symporter (SUT4) nearly identical to sucrose transporter SUT4 [Arabidopsis thaliana] GI:9957053 6 2 2 1 At1g10000 expressed protein 6 2 2 2 At1g10155 hypothetical protein 6 2 2 3 At1g10220 hypothetical protein 6 2 2 4 At1g10385 hypothetical protein 6 2 2 5 At1g10450 paired amphipathic helix repeat-containing protein similar to Sin3 protein [Yarrowia lipolytica] GI:18076824; contains Pfam profile PF02671: Paired amphipathic helix repeat 6 2 2 6 At1g10585 expressed protein 6 2 2 7 At1g10630 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor GI:166586 from [Arabidopsis thaliana]" 6 2 2 8 At1g13290 "zinc finger (C2H2 type) family protein contains Pfam domian PF00096: Zinc finger, C2H2 type" 6 2 2 9 At1g13350 "protein kinase family protein contains protein kinase domain, Pfam:PF00069 (likely that this cDNA contains a single unspliced intron. Putative intron removed in this gene model.)" 6 2 2 10 At1g13520 expressed protein 6 2 2 11 At1g13570 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 2 2 12 At1g13760 hypothetical protein 6 2 2 13 At1g13820 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 6 2 2 14 At1g14000 "protein kinase family protein / ankyrin repeat family protein contains Pfam profiles: PF00069 protein kinase domain, PF00023 ankyrin repeat" 6 2 2 15 At1g14070 "xyloglucan fucosyltransferase, putative (FUT7) nearly identical to SP|Q9XI81 Probable fucosyltransferase 7 (EC 2.4.1.-) (AtFUT7) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from (Arabidopsis thaliana)" 6 2 2 16 At1g16690 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] 6 2 2 17 At1g16740 ribosomal protein L20 family protein similar to ribosomal protein L20 GI:3603025 from [Guillardia theta] 6 2 2 18 At1g16880 uridylyltransferase-related similar to [Protein-PII] uridylyltransferase (PII uridylyl- transferase) (Uridylyl removing enzyme) (UTase)(SP:Q9AC53) [Caulobacter crescentus] 6 2 2 19 At1g16910 hypothetical protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 6 2 2 20 At1g17100 SOUL heme-binding family protein similar to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 6 2 2 21 At1g17150 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Salix gilgiana] GI:6714524; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 6 2 2 22 At1g17330 metal-dependent phosphohydrolase HD domain-containing protein-related 6 2 2 23 At1g17380 expressed protein 6 2 2 24 At1g20270 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 6 2 2 25 At1g20330 S-adenosyl-methionine-sterol-C-methyltransferase identical to sterol-C-methyltransferase GI:1061040 from [Arabidopsis thaliana] 6 2 3 1 At1g20510 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to SP|P14912 and SP|P14913 from Petroselinum crispum; contains Pfam AMP-binding enzyme domain PF00501 6 2 3 2 At1g20550 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'axi 1 protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 6 2 3 3 At1g20696 high mobility group protein beta2 (HMGbeta2) / HMG protein beta2 nearly identical to HMG protein (HMGbeta2) [Arabidopsis thaliana] GI:2832361 6 2 3 4 At1g20750 helicase-related similar to BRCA1-binding helicase-like protein BACH1 (GI:13661819) Homo sapiens].; 6 2 3 5 At1g20910 "ARID/BRIGHT DNA-binding domain-containing protein low similarity to Chain A, Human Mrf-2 Domain [Homo sapiens] GI:14278238; contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain" 6 2 3 6 At1g20960 "U5 small nuclear ribonucleoprotein helicase, putative similar to SP|O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase {Homo sapiens}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF02889: Sec63 domain" 6 2 3 7 At1g23650 expressed protein ; expression supported by MPSS 6 2 3 8 At1g23690 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 6 2 3 9 At1g23850 expressed protein 6 2 3 10 At1g23890 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 6 2 3 11 At1g24040 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 6 2 3 12 At1g24100 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 2 3 13 At1g24260 "MADS-box protein (AGL9) strongly similar to GB:O22456, MADS-box protein, Location of EST gb|H37053" 6 2 3 14 At1g24280 "glucose-6-phosphate 1-dehydrogenase, putative / G6PD, putative strong similarity to SP|Q43839 Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) {Solanum tuberosum}; contains Pfam profiles PF02781: Glucose-6-phosphate dehydrogenase C-terminal, PF00479: Glucose-6-phosphate dehydrogenase NAD binding domain" 6 2 3 15 At1g28010 "multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein GI:3849833 from [Arabidopsis thaliana]" 6 2 3 16 At1g28070 expressed protein ; expression supported by MPSS 6 2 3 17 At1g28200 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 6 2 3 18 At1g28240 expressed protein 6 2 3 19 At1g28375 expressed protein 6 2 3 20 At1g28395 expressed protein 6 2 3 21 At1g28570 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 6 2 3 22 At1g28590 "lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 6 2 3 23 At1g31750 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 6 2 3 24 At1g31810 formin homology 2 domain-containing protein / FH2 domain-containing protein low similarity to SP|P48608 Diaphanous protein {Drosophila melanogaster}; contains Pfam profile PF02181: Formin Homology 2(FH2) Domain 6 2 3 25 At1g31960 hypothetical protein 6 2 4 1 At1g32030 expressed protein contains Pfam profile PF03754: Domain of unknown function (DUF313); expression supported by MPSS 6 2 4 2 At1g32220 expressed protein 6 2 4 3 At1g32260 expressed protein identical to hypothetical protein GB:AAF81322 GI:8920600 from [Arabidopsis thaliana] 6 2 4 4 At1g32400 senescence-associated family protein contains Pfam profile PF00335: Tetraspanin family 6 2 4 5 At1g32420 F-box family protein contains F-box domain Pfam:PF00646 6 2 4 6 At1g35940 "AT hook motif-containing protein-related very low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}; contains weak hit to PF02178: AT hook motif" 6 2 4 7 At1g36060 "AP2 domain-containing transcription factor, putative similar to AP2 domain transcription factor GI:4567204 from [Arabidopsis thaliana]" 6 2 4 8 At1g36395 hypothetical protein 6 2 4 9 At1g36675 glycine-rich protein 6 2 4 10 At1g37045 hypothetical protein 6 2 4 11 At1g37150 holocarboxylase synthetase 2 (HCS2.d) identical to holocarboxylase synthetase hcs2.d [Arabidopsis thaliana] GI:19698373; contains non-consensus GG acceptor splice sites; contains Pfam profile PF03099: Biotin/lipoate A/B protein ligase family; contains TIGRfam profile TIGR00121: biotin--acetyl-CoA-carboxylase ligase; 6 2 4 12 At1g41650 hypothetical protein 6 2 4 13 At1g41855 hypothetical protein 6 2 4 14 At1g48210 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 [Lycopersicon esculentum] gi|3668069|gb|AAC61805; contains protein kinase domain, Pfam:PF00069" 6 2 4 15 At1g48270 G protein coupled receptor-related identical to putative G protein coupled receptor GI:2104224 from [Arabidopsis thaliana] 6 2 4 16 At1g48440 expressed protein 6 2 4 17 At1g48500 expressed protein ; expression supported by MPSS 6 2 4 18 At1g48635 "peroxin-3 family protein contains Pfam domain, PF04882: Peroxin-3" 6 2 4 19 At1g48700 "oxidoreductase, 2OG-Fe(II) oxygenase-related contains weak hit to Pfam PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 6 2 4 20 At1g48880 hypothetical protein 6 2 4 21 At1g48950 expressed protein 6 2 4 22 At1g51930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 2 4 23 At1g51980 "mitochondrial processing peptidase alpha subunit, putative similar to mitochondrial processing peptidase alpha subunit, mitochondrial precursor, Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II) [Potato] SWISS-PROT:P29677" 6 2 4 24 At1g52150 "homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to to HD-zip transcription factor (athb-8) (GI:7270235) [Arabidopsis thaliana]; contains Pfam profiles PF01852: START domain, PF00046: Homeobox domain" 6 2 4 25 At1g52200 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 6 2 5 1 At1g52370 ribosomal protein L22 family protein similar to GB:Z67753 from [Odontella sinensis] 6 2 5 2 At1g52410 caldesmon-related weak similarity to Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus] 6 2 5 3 At1g52560 "26.5 kDa class I small heat shock protein-like (HSP26.5-P) contains Pfam profile: PF00011 Hsp20/alpha crystallin family; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 6 2 5 4 At1g52615 hypothetical protein 6 2 5 5 At1g55290 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GI:5924383 from [Daucus carota]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 6 2 5 6 At1g55340 expressed protein 6 2 5 7 At1g55480 expressed protein 6 2 5 8 At1g55520 transcription initiation factor IID-2 (TFIID-2) / TATA-box factor 2 / TATA sequence-binding protein 2 (TBP2) identical to Swiss-Prot:P28148|TF22_ARATH Transcription initiation factor TFIID-2 (TATA-box factor 2) (TATA sequence-binding protein 2) (TBP-2) [Arabidopsis thaliana] 6 2 5 9 At1g55670 "photosystem I reaction center subunit V, chloroplast, putative / PSI-G, putative (PSAG) identical to SP|Q9S7N7; similar to SP|Q00327 Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) {Hordeum vulgare}; contains Pfam profile PF01241: Photosystem I psaG / psaK" 6 2 5 10 At1g55710 hypothetical protein 6 2 5 11 At1g55880 "pyridoxal-5'-phosphate-dependent enzyme, beta family protein similar to SP|P50867 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 6 2 5 12 At1g55915 expressed protein similar to Hypothetical 30.6 kDa protein in ACT5-YCK1 intergenic region (Swiss-Prot:P38838) [Saccharomyces cerevisiae]; similar to Yhr134wp (GI:500671) [Saccharomyces cerevisiae] 6 2 5 13 At1g60570 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 2 5 14 At1g60640 expressed protein 6 2 5 15 At1g60830 "U2 snRNP auxiliary factor large subunit, putative similar to GI:3850823 from (Nicotiana plumbaginifolia) (J. Biol. Chem. 273 (51), 34603-34610 (1998))" 6 2 5 16 At1g60870 expressed protein 6 2 5 17 At1g61030 expressed protein 6 2 5 18 At1g61080 proline-rich family protein 6 2 5 19 At1g61240 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 6 2 5 20 At1g61290 "syntaxin, putative (SYP124) similar to syntaxin-related protein Nt-syr1 GI:4206787 from [Nicotiana tabacum]" 6 2 5 21 At1g64050 expressed protein 6 2 5 22 At1g64100 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 2 5 23 At1g64280 "regulatory protein (NPR1) identical to regulatory protein NPR1 (nonexpresser of PR genes 1, NPR1; noninducible immunity 1, Nim1; salicylic acid insensitive 1, Sai1) [Arabidopsis thaliana] SWISS-PROT:P93002" 6 2 5 24 At1g64330 myosin heavy chain-related similar to myosin heavy chain (GI:1850913) [Entamoeba histolytica]; similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] 6 2 5 25 At1g64490 expressed protein 6 2 6 1 At1g64550 ABC transporter family protein similar to ABC transporter protein GB:AAF31030 GI:6899653 from [Leishmania major] 6 2 6 2 At1g64720 expressed protein weak similarity to SP|P53809 Phosphatidylcholine transfer protein (PC-TP) {Rattus norvegicus} 6 2 6 3 At1g64770 expressed protein 6 2 6 4 At1g67580 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 2 6 5 At1g67635 hypothetical protein 6 2 6 6 At1g67785 expressed protein 6 2 6 7 At1g67840 "ATP-binding region, ATPase-like domain-containing protein contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; similar to ESTs gb|AI995396.1, dbj|AV557393.1, and dbj|AV557055.1" 6 2 6 8 At1g67950 RNA recognition motif (RRM)-containing protein 6 2 6 9 At1g67990 "caffeoyl-CoA 3-O-methyltransferase, putative similar to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa]" 6 2 6 10 At1g68150 WRKY family transcription factor similar to DNA-binding protein ABF2 GI:1159879 from [Avena fatua] 6 2 6 11 At1g68200 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 2 6 12 At1g70850 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 6 2 6 13 At1g70910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 2 6 14 At1g71080 expressed protein 6 2 6 15 At1g71140 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 6 2 6 16 At1g71310 expressed protein 6 2 6 17 At1g71350 eukaryotic translation initiation factor SUI1 family protein weak similarity to SP|P41214 Ligatin (Hepatocellular carcinoma-associated antigen 56) {Homo sapiens}; contains Pfam profile PF01253: Translation initiation factor SUI1 6 2 6 18 At1g71530 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 6 2 6 19 At1g71692 "MADS-box protein (AGL12) identical to GB:AAC49085 GI:862650 from (Arabidopsis thaliana) (Plant Cell 7 (8), 1259-1269 (1995))" 6 2 6 20 At1g74410 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 2 6 21 At1g74450 expressed protein 6 2 6 22 At1g74630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 2 6 23 At1g74690 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 6 2 6 24 At1g74870 expressed protein contains similarity to hypothetical proteins 6 2 6 25 At1g74920 "betaine-aldehyde dehydrogenase, putative identical to betaine-aldehyde dehydrogenase, chloroplast precursor (BADH) [Arabidopsis thaliana] SWISS-PROT:Q9S795; strong similarity to betaine aldehyde dehydrogenase [Amaranthus hypochondriacus] GI:2388710" 6 2 7 1 At1g75090 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 6 2 7 2 At1g75150 expressed protein ; expression supported by MPSS 6 2 7 3 AT5G57480 PC-1 B07 6 2 7 4 3XSSC PC-1 B19 6 2 7 5 AT1G29930 PC-1 F07 6 2 7 6 3XSSC PC-1 F19 6 2 7 7 AT3G44150 PC-1 J07 6 2 7 8 3XSSC PC-1 J19 6 2 7 9 AT4G00810 PC-1 N07 6 2 7 10 3XSSC PC-1 N19 6 2 7 11 At1g77870 expressed protein similar to geranylgeranylated protein ATGP4 [GI:4097567] 6 2 7 12 At1g77930 DNAJ heat shock N-terminal domain-containing protein similar to J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj GI:5542126; contains Pfam profile PF00226 DnaJ domain 6 2 7 13 At1g78090 trehalose-6-phosphate phosphatase (TPPB) identical to trehalose-6-phosphate phosphatase (AtTPPB) GI:2944180 [Arabidopsis thaliana] 6 2 7 14 At1g78150 expressed protein 6 2 7 15 At1g78300 14-3-3 protein GF14 omega (GRF2) identical to GF14omega isoform GI:487791 from [Arabidopsis thaliana] 6 2 7 16 At1g78370 "glutathione S-transferase, putative similar to 2,4-D inducible glutathione S-transferase GI:2920666 from [Glycine max]" 6 2 7 17 At1g78550 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to naringenin,2-oxoglutarate 3-dioxygenase (flavonone-3-hydroxylase) [SP|Q06942][Malus domestica]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 6 2 7 18 At1g78610 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 6 2 7 19 At2g01180 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 6 2 7 20 At2g01200 auxin-responsive AUX/IAA family protein contains Pfam profile: PF02309 AUX/IAA family 6 2 7 21 At2g01340 expressed protein 6 2 7 22 At2g01410 hypothetical protein 6 2 7 23 At2g01570 "gibberellin response modulator (RGA1) / gibberellin-responsive modulator identical to GB:Y11336, member of SCARECROW family" 6 2 7 24 At2g01630 "glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 6 2 7 25 At2g01770 "integral membrane family protein contains integral membrane protein domain, Pfam:PF01988" 6 2 8 1 At2g01830 "histidine kinase (AHK4) (WOL) identical to histidine kinase AHK4 [Arabidopsis thaliana] gi|13537200|dbj|BAB40776; contains Pfam profiles PF03924: CHASE domain, PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00512: His Kinase A (phosphoacceptor) domain, PF00072: Response regulator receiver domain" 6 2 8 2 At2g04970 "hypothetical protein similar to At2g15200, At1g32830, At2g14140, At3g30450, At4g03990, At5g34895, At3g47270, At2g02200" 6 2 8 3 At2g05082 hypothetical protein 6 2 8 4 At2g05300 F-box family protein contains F-box domain Pfam:PF00646 6 2 8 5 At2g05370 expressed protein similar to SGS2 (GI:8164028) [Arabidopsis thaliana]; similar to RNA-dependent RNA polymerase (GI:8248473) [Arabidopsis thaliana] 6 2 8 6 At2g05590 expressed protein similar to nucleolar protein C7C (GI:13540302) [Rattus norvegicus] 6 2 8 7 At2g05642 expressed protein 6 2 8 8 At2g05880 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 6 2 8 9 At2g05940 "protein kinase, putative similar to auxin-regulated dual specificity cytosolic kinase [Lycopersicon esculentum] gi|14484938|gb|AAK62821" 6 2 8 10 At2g14060 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 6 2 8 11 At2g14120 dynamin-like protein 2b (ADL2b) identical to dynamin like protein 2b (ADL2b) [Arabidopsis thaliana] GI:19032339 6 2 8 12 At2g14440 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 6 2 8 13 At2g14520 "CBS domain-containing protein contains Pfam profiles PF00571: CBS domain, PF01595: Domain of unknown function" 6 2 8 14 At2g14700 hypothetical protein 6 2 8 15 At2g14760 basic helix-loop-helix protein / bHLH protein contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain; PMID: 12679534; putative bHLH084 transcription factor 6 2 8 16 At2g14890 arabinogalactan-protein (AGP9) identical to gi|10880495|gb|AAG24277 6 2 8 17 At2g14920 "sulfotransferase family protein similar to steroid sulfotransferase from [Brassica napus] GI:3420008, GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 6 2 8 18 At2g18030 peptide methionine sulfoxide reductase family protein similar to SP|P08761 Ecdysone-induced protein 28/29 kDa {Drosophila melanogaster}; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase 6 2 8 19 At2g18050 "histone H1-3 (HIS1-3) similar to histone H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3 [Arabidopsis thaliana] GI:1809305" 6 2 8 20 At2g18210 expressed protein 6 2 8 21 At2g18245 expressed protein 6 2 8 22 At2g18410 expressed protein 6 2 8 23 At2g18460 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502); contains non-consensus splice sites" 6 2 8 24 At2g18640 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:1944371; contains GB:L22347" 6 2 8 25 At2g18700 "glycosyl transferase family 20 protein / trehalose-phosphatase family protein similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 6 2 9 1 At2g21350 expressed protein 6 2 9 2 At2g21410 "vacuolar proton ATPase, putative similar to vacuolar proton ATPase 100-kDa subunit from Dictyostelium discoideum P|1384136|gb|AAB49621" 6 2 9 3 At2g21600 RER1B protein identical to SP|O48671 RER1B protein (AtRER1B) {Arabidopsis thaliana} 6 2 9 4 At2g21640 expressed protein 6 2 9 5 At2g21840 "CHP-rich zinc finger protein, putative " 6 2 9 6 At2g21880 "Ras-related GTP-binding protein, putative similar to Ras family GTP-binding protein SP:Q43463 from [Glycine max]" 6 2 9 7 At2g22050 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 2 9 8 At2g22100 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 6 2 9 9 At2g24980 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 2 9 10 At2g25070 "protein phosphatase 2C, putative / PP2C, putative " 6 2 9 11 At2g25250 expressed protein 6 2 9 12 At2g25305 hypothetical protein 6 2 9 13 At2g25490 F-box family protein (FBL6) contains similarity to grr1 GI:2407790 from [Glycine max] 6 2 9 14 At2g25560 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 6 2 9 15 At2g25690 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 6 2 9 16 At2g25737 expressed protein contains Pfam profile: PF01925 domain of unknown function DUF81 6 2 9 17 At2g28350 "auxin-responsive factor (ARF10) similar to auxin response factor 10 GI:6165644 from [Arabidopsis thaliana]; identical to cDNA auxin response factor 10 (ARF10) mRNA, partial cds GI:6165643" 6 2 9 18 At2g28400 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 6 2 9 19 At2g28560 expressed protein 6 2 9 20 At2g28610 homeobox-leucine zipper transcription factor (PRESSED FLOWER) identical to PRESSED FLOWER (GP:17907768) {Arabidopsis thaliana} 6 2 9 21 At2g28790 "osmotin-like protein, putative similar to SP|Q41350 Osmotin-like protein precursor {Lycopersicon esculentum}; contains Pfam profile PF00314: Thaumatin family" 6 2 9 22 At2g28830 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 6 2 9 23 At2g29040 exostosin family protein contains Pfam profile: PF03016 exostosin family 6 2 9 24 At2g29080 "FtsH protease, putative similar to AAA-metalloprotease FtsH [Pisum sativum] GI:15021761; contains Pfam profiles PF01434: Peptidase family M41, PF00004: ATPase AAA family" 6 2 9 25 At2g31770 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam domain, PF01485: IBR domain" 6 2 10 1 At2g31810 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 6 2 10 2 At2g31970 DNA repair-recombination protein (RAD50) identical to DNA repair-recombination protein GI:7110148 from [Arabidopsis thaliana] 6 2 10 3 At2g32020 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 6 2 10 4 At2g32190 expressed protein 6 2 10 5 At2g32240 expressed protein contains Pfam profile: PF04508 viral A-type inclusion protein repeat 6 2 10 6 At2g32380 expressed protein 6 2 10 7 At2g32440 "ent-kaurenoic acid hydroxylase, putative / cytochrome P450, putative identical to ent-kaurenoic acid hydroxylase / cytochrome P450 CYP88A (GI:13021856) [Arabidopsis thaliana]; similar to ent-kaurenoic acid hydroxylase [Arabidopsis thaliana] GI:13021853" 6 2 10 8 At2g35020 UTP--glucose-1-phosphate uridylyltransferase family protein similar to SP|Q16222 UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) {Homo sapiens}; contains Pfam profile PF01704: UTP--glucose-1-phosphate uridylyltransferase 6 2 10 9 At2g35070 expressed protein 6 2 10 10 At2g35215 expressed protein [Arabidopsis thaliana] 6 2 10 11 At2g35280 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 2 10 12 At2g35470 expressed protein 6 2 10 13 At2g35520 "defender against cell death 2 (DAD2) identical to defender against cell death 2 (DAD-2, AtDAD2) [Arabidopsis thaliana] SWISS-PROT:O22622" 6 2 10 14 At2g35650 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535; identical to cDNA for partial mRNA for glycosyltransferase (cslA07 gene) GI:28551963" 6 2 10 15 At2g35690 "acyl-CoA oxidase, putative strong similarity to acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214" 6 2 10 16 At2g38255 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 6 2 10 17 At2g38320 expressed protein 6 2 10 18 At2g38480 "integral membrane protein, putative contains 4 transmembrane domains; contains plant integral membrane protein domain, TIGR01569 and PF04535;: Domain of unknown function (DUF588); At3g16300, At1g45222 both share this domain structure; distantly related to GP|14030504 salicylic acid-induced fragment 1 protein {Gossypium hirsutum}; similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 6 2 10 19 At2g38550 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 6 2 10 20 At2g38720 microtubule associated protein (MAP65/ASE1) family protein low similarity to myosin [Schistosoma japonicum] GI:3941320; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 6 2 10 21 At2g38780 expressed protein 6 2 10 22 At2g38880 histone-like transcription factor (CBF/NF-Y) family protein similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays] and CCAAT-binding transcription factor subunit A (CBF-A) (NF-Y protein chain B) (NF-YB) (CAAT-box DNA binding protein subunit B) (SP:P25210) [Petromyzon marinus]; contains a CBF/NF-Y subunit signature (PDOC00578) presernt in members of histone-like transcription factor family; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 2 10 23 At2g38920 "SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related weak similarity to tripartite motif protein TRIM13 [Mus musculus] GI:12407427; contains Pfam profile PF03105: SPX domain, weak hit to PF00097: Zinc finger, C3HC4 type (RING finger)" 6 2 10 24 At2g41460 apurinic endonuclease-redox protein / DNA-(apurinic or apyrimidinic site) lyase identical to apurinic endonuclease-redox protein SP: P45951 from [Arabidopsis thaliana] 6 2 10 25 At2g41520 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 6 2 11 1 At2g41670 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 6 2 11 2 At2g41710 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana];Pfam domain (PF00847)" 6 2 11 3 At2g41850 "endo-polygalacturonase, putative similar to endo-polygalacturonase [Arabidopsis thaliana] GI:2597824; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 6 2 11 4 At2g41900 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat" 6 2 11 5 At2g42060 "CHP-rich zinc finger protein, putative " 6 2 11 6 At2g42120 DNA polymerase delta small subunit-related similar to DNA polymerase delta small subunit SP:Q9LRE5 from [Oryza sativa] 6 2 11 7 At2g44710 RNA recognition motif (RRM)-containing protein 6 2 11 8 At2g44750 "thiamin pyrophosphokinase, putative similar to thiamin pyrophosphokinase [Mus musculus] gi|6468206|dbj|BAA87040" 6 2 11 9 At2g44920 "thylakoid lumenal 15 kDa protein, chloroplast identical to SP|O22160 Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) {Arabidopsis thaliana}; contains 8 pentapeptide repeats" 6 2 11 10 At2g44980 "transcription regulatory protein SNF2, putative similar to SNF2P [Oryza sativa (japonica cultivar-group)] GI:23193483; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; CG donor site annotated in one isoform based on protein alignments." 6 2 11 11 At2g45135 expressed protein ; expression supported by MPSS 6 2 11 12 At2g45180 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 14 kDa polypeptide [Catharanthus roseus] GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 6 2 11 13 At2g45380 expressed protein similar to gi2344899|AC002388 6 2 11 14 At2g45440 dihydrodipicolinate synthase 2 (DHDPS2) identical to dihydrodipicolinate synthase 2 (DHDPS2) [Arabidopsis thaliana] GI:11066382 6 2 11 15 At2g48040 expressed protein 6 2 11 16 At2g48090 expressed protein weak similarity to protein kinase 6 2 11 17 At3g01040 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 6 2 11 18 At3g01080 WRKY family transcription factor similar to NtWRKY1 transcription factor GB:BAA82107 from [Nicotiana tabacum] 6 2 11 19 At3g01230 expressed protein 6 2 11 20 At3g01290 band 7 family protein similar to hypersensitive-induced response protein [Zea mays] GI:7716470; contains Pfam profile PF01145: SPFH domain / Band 7 family 6 2 11 21 At3g01420 "pathogen-responsive alpha-dioxygenase, putative similar to pathogen-inducible alpha-dioxygenase [Nicotiana attenuata] GI:12539609; contains Pfam profile PF03098: Animal haem peroxidase" 6 2 11 22 At3g01470 homeobox-leucine zipper protein 5 (HAT5) / HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana] 6 2 11 23 At3g04030 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 6 2 11 24 At3g04090 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 6 2 11 25 At3g04270 hypothetical protein 6 2 12 1 At3g04320 trypsin and protease inhibitor family protein / Kunitz family protein weak similarity to Kunitz trypsin inhibitor TI1 [Populus tremuloides] GI:13605350; contains Pfam profile PF00197: Trypsin and protease inhibitor 6 2 12 2 At3g04480 endoribonuclease L-PSP family protein contains Pfam domain PF01902: Domain of unknown function 6 2 12 3 At3g04540 hypothetical protein 6 2 12 4 At3g04670 WRKY family transcription factor similar to elicitor response element binding protein WRKY3 isolog GB:AAB63078 [Arabidopsis thaliana] 6 2 12 5 At3g04730 auxin-responsive protein / indoleacetic acid-induced protein 16 (IAA16) identical to SP|O24407 Auxin-responsive protein IAA16 (Indoleacetic acid-induced protein 16) {Arabidopsis thaliana} 6 2 12 6 At3g07200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger)" 6 2 12 7 At3g07270 GTP cyclohydrolase I identical to GTP cyclohydrolase I GI:19909132 from [Arabidopsis thaliana]; contains Pfam profile: PF01227 GTP cyclohydrolase I 6 2 12 8 At3g07430 YGGT family protein contains Pfam profile PF02325: YGGT family (unknown function) 6 2 12 9 At3g07470 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 6 2 12 10 At3g07600 heavy-metal-associated domain-containing protein identical to residues 23 to 179 of farnesylated protein ATFP4 (putative metal-binding protein) GB:AAD09508 [Arabidopsis thaliana]; contains Pfam profile PF00403: Heavy-metal-associated domain 6 2 12 11 At3g07660 expressed protein 6 2 12 12 At3g07800 "thymidine kinase, putative similar to thymidine kinase [Oryza sativa] SWISS-PROT:O81263" 6 2 12 13 At3g07850 "exopolygalacturonase / galacturan 1,4-alpha-galacturonidase / pectinase identical to SP|P49063 Exopolygalacturonase clone GBGA483 precursor (EC 3.2.1.67) (ExoPG) (Galacturan 1,4-alpha-galacturonidase) {Arabidopsis thaliana}" 6 2 12 14 At3g10820 transcription elongation factor-related low similarity to transcription elongation factor TFIIS.h [Mus musculus] GI:3288547 6 2 12 15 At3g10870 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, SP|Q43360 PIR7B protein {Oryza sativa}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 6 2 12 16 At3g10980 expressed protein 6 2 12 17 At3g11030 expressed protein contains Pfam domain PF03005: Arabidopsis proteins of unknown function 6 2 12 18 At3g11210 GDSL-motif lipase/hydrolase family protein contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 6 2 12 19 At3g11270 "26S proteasome non-ATPase regulatory subunit 7, putative / 26S proteasome regulatory subunit S12, putative / MOV34 protein, putative contains similarity to 26S proteasome regulatory subunit S12 (MOV34) SP:P26516 from [Mus musculus]" 6 2 12 20 At3g11405 hypothetical protein 6 2 12 21 At3g11460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 2 12 22 At3g13830 F-box family protein contains Pfam:PF00646 F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 6 2 12 23 At3g13870 "root hair defective 3 (RHD3) identical to root hair defective 3 (RHD3) GI:1839188 from [Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)" 6 2 12 24 At3g14040 "exopolygalacturonase / galacturan 1,4-alpha-galacturonidase / pectinase identical to exopolygalacturonase [Arabidopsis thaliana] GI:311962; nearly identical to SP|P49063 Exopolygalacturonase clone GBGA483 precursor (EC 3.2.1.67) (ExoPG) (Galacturan 1,4-alpha-galacturonidase) {Arabidopsis thaliana}" 6 2 12 25 At3g14080 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116; contains Pfam profile: PF01423 Sm protein" 6 2 13 1 At3g14205 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to SAC domain protein 2 (SAC2) GI:31415720" 6 2 13 2 At3g14230 AP2 domain-containing protein RAP2.2 (RAP2.2) identical to AP2 domain containing protein RAP2.2 GI:2281629 from [Arabidopsis thaliana] 6 2 13 3 At3g14390 "diaminopimelate decarboxylase, putative / DAP carboxylase, putative similar to diaminopimelate decarboxylase [Arabidopsis thaliana] GI:6562332; contains Pfam profiles PF02784: Pyridoxal-dependent decarboxylase pyridoxal binding domain, PF00278: Pyridoxal-dependent decarboxylase C-terminal sheet domain" 6 2 13 4 At3g14430 expressed protein 6 2 13 5 At3g17010 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 6 2 13 6 At3g17080 "self-incompatibility protein-related similar to S1 self-incompatibility protein GB:CAA52380 [Papaver rhoeas] (Proc. Natl. Acad. Sci. U.S.A. 91 (6), 2265-2269 (1994))" 6 2 13 7 At3g17210 stable protein 1-related similar to stable protein 1 (GI:13445204) [Populus tremula] PMID:12376651; similar to pop3 peptide GB:AAC26526 from [Populus balsamifera subsp. trichocarpa X Populus deltoides] 6 2 13 8 At3g17240 "dihydrolipoamide dehydrogenase 2, mitochondrial / lipoamide dehydrogenase 2 (MTLPD2) nearly identical to GB:AAF34796 [gi:6984216] from [Arabidopsis thaliana]; alternative splice form exists" 6 2 13 9 At3g17410 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 GB:AAC61805 from [Lycopersicon esculentum]" 6 2 13 10 At3g17465 ribosomal protein L3 family protein 6 2 13 11 At3g17609 bZIP transcription factor family protein / HY5-like protein (HYH) nearly identical to HY5-like protein [Arabidopsis thaliana] GI:18042111; similar to TGACG-motif binding factor GI:2934884 from [Glycine max]; contains Pfam profile: PF00170 bZIP transcription factor 6 2 13 12 At3g17640 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558" 6 2 13 13 At3g20310 ethylene-responsive element-binding family protein similar to SP|O80339 Ethylene responsive element binding factor 3 (AtERF3) {Arabidopsis thaliana}; contains Pfam profile PF00847: AP2 domain 6 2 13 14 At3g20350 expressed protein 6 2 13 15 At3g20520 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to glycerophosphodiester phosphodiesterase (GI:1399038) [Borrelia hermsii] 6 2 13 16 At3g20570 plastocyanin-like domain-containing protein 6 2 13 17 At3g20750 zinc finger (GATA type) family protein 6 2 13 18 At3g20810 transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain PF02373: jmjC domain 6 2 13 19 At3g20960 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; 6 2 13 20 At3g21070 "ATP-NAD kinase family protein contains Pfam domain, PF01513: ATP-NAD kinase" 6 2 13 21 At3g23760 expressed protein 6 2 13 22 At3g23810 "adenosylhomocysteinase, putative / S-adenosyl-L-homocysteine hydrolase, putative / AdoHcyase, putative strong similarity to SP|P50248|SAHH_TOBAC Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) {Nicotiana sylvestris}; contains Pfam profile PF00670: S-adenosyl-L-homocysteine hydrolase, NAD binding domain" 6 2 13 23 At3g23980 dentin sialophosphoprotein-related contains weak similarity to Dentin sialophosphoprotein precursor (Swiss-Prot:Q9NZW4) [Homo sapiens] 6 2 13 24 At3g24040 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 6 2 13 25 At3g24190 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 6 2 14 1 At3g24240 "leucine-rich repeat transmembrane protein kinase, putative similar to CLV1 receptor kinase GB:AAB58929 from [Arabidopsis thaliana]" 6 2 14 2 At3g24420 "hydrolase, alpha/beta fold family protein low similarity to 3-oxoadipate enol-lactone hydrolase [Pseudomonas sp. B13] GI:17736948, B-ketoadipate enol-lactone hydrolase [Bradyrhizobium japonicum] GI:2239060; contains Pfam profile:PF00561 abhydrolase:alpha/beta hydrolase fold" 6 2 14 3 At3g24490 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 6 2 14 4 At3g27210 expressed protein 6 2 14 5 At3g27270 expressed protein 6 2 14 6 At3g27420 expressed protein 6 2 14 7 At3g27470 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 6 2 14 8 At3g27640 transducin family protein / WD-40 repeat family protein contains seven WD-40 G-protein beta repeats; similar to RA-regulated nuclear matrix-associated protein (GI:14161320) {Homo sapiens} 6 2 14 9 At3g27700 RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif 6 2 14 10 At3g27900 hypothetical protein 6 2 14 11 At3g27950 "early nodule-specific protein, putative similar to nodulin (GI:1009720) and early nodulin(GI:304037 ) Medicago truncatula];" 6 2 14 12 At3g32080 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 6 2 14 13 At3g32150 hypothetical protein 6 2 14 14 At3g32920 recA family protein contains Pfam profile: PF00154 recA bacterial DNA recombination protein 6 2 14 15 At3g33073 hypothetical protein 6 2 14 16 At3g42120 hypothetical protein 6 2 14 17 At3g42160 pectinesterase-related contains weak similarity to Swiss-Prot:Q96575 pectinesterase 2 precursor (Pectin methylesterase 2) (PE 2) [Lycopersicon esculentum] 6 2 14 18 At3g42430 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 6 2 14 19 At3g42490 hypothetical protein 6 2 14 20 At3g45590 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 6 2 14 21 At3g45650 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 2 14 22 At3g45810 "ferric reductase-like transmembrane component family protein similar to respiratory burst oxidase protein D RbohD from Arabidopsis thaliana, EMBL:AF055357 [gi:3242789], similar to respiratory burst oxidase protein D RbohD from Arabidopsis thaliana, EMBL:AF055357 [gi:3242789], respiratory burst oxidase homolog from Solanum tuberosum [GI:16549089]; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 6 2 14 23 At3g45870 "integral membrane family protein / nodulin MtN21-related simlar to MtN21 GI:2598575 (root nodule development) Medicago truncatula, EMBL:MTY15293" 6 2 14 24 At3g46050 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 6 2 14 25 At3g46110 expressed protein 6 2 15 1 At3g46300 hypothetical protein 6 2 15 2 At3g46360 hypothetical protein 6 2 15 3 At3g49150 F-box family protein contains F-box domain Pfam:PF00646 6 2 15 4 At3g49210 expressed protein 6 2 15 5 At3g49370 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] gi|16904222|gb|AAL30818" 6 2 15 6 At3g49430 "pre-mRNA splicing factor, putative strong similarity to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana}" 6 2 15 7 At3g49610 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 6 2 15 8 At3g49670 "leucine-rich repeat transmembrane protein kinase, putative CLAVATA1 receptor kinase, Arabidopsis thaliana, EMBL:ATU96879" 6 2 15 9 At3g49850 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 6 2 15 10 At3g49910 "60S ribosomal protein L26 (RPL26A) 60S RIBOSOMAL PROTEIN L26, Brassica rapa, EMBL:BRD495" 6 2 15 11 At3g52620 "hypothetical protein phosphate actyltransferase, Staphylococcus aureus, EMBL:SAU271496" 6 2 15 12 At3g52670 F-box family protein contains F-box domain Pfam:PF00646 6 2 15 13 At3g52810 purple acid phosphatase (PAP21) identical to purple acid phosphatase GI:20257492 from [Arabidopsis thaliana]; contains Pfam profile PF00149: Ser/Thr protein phosphatase 6 2 15 14 At3g52870 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 6 2 15 15 At3g53010 "expressed protein weak partial homology with single predicted protein kinase, Arabidopsis thaliana" 6 2 15 16 At3g53070 beta-galactosidase-related contains weak similarity to beta-galactosidase [Fragaria x ananassa] gi|14970841|emb|CAC44501 6 2 15 17 At3g53235 expressed protein 6 2 15 18 At3g53280 cytochrome P450 71B5 (CYP71B5) Identical to Cytochrome P450 71B5 (SP:O65784) [Arabidopsis thaliana] 6 2 15 19 At3g55880 expressed protein 6 2 15 20 At3g55920 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401" 6 2 15 21 At3g56100 "leucine-rich repeat transmembrane protein kinase, putative hypothetical proteins - Arabidopsis thaliana" 6 2 15 22 At3g56140 "expressed protein At2g40400 - Arabidopsis thaliana, EMBL:AC007020" 6 2 15 23 At3g56320 nucleotidyltransferase family protein contains Pfam profile: PF01909 nucleotidyltransferase domain 6 2 15 24 At3g56380 two-component responsive regulator / response regulator 17 (ARR17) identical to response regulator 17 GI:11870070 from [Arabidopsis thaliana] 6 2 15 25 At3g56560 "no apical meristem (NAM) family protein NAM (no apical meristem)-like protein T26I12.90 - Arabidopsis thaliana, EMBL:AL132954" 6 2 16 1 At3g56620 integral membrane family protein / nodulin MtN21-related similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 6 2 16 2 At3g59430 expressed protein 6 2 16 3 At3g59490 expressed protein 6 2 16 4 At3g59680 expressed protein 6 2 16 5 At3g59730 "receptor lectin kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 6 2 16 6 At3g59890 "dihydrodipicolinate reductase family protein weak similarity to SP|Q52419 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR) {Pseudomonas syringae}; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 6 2 16 7 At3g59930 expressed protein 6 2 16 8 At3g60090 VQ motif-containing protein contains PF05678: VQ motif 6 2 16 9 At3g60150 "hypothetical protein low similarity to 2P1 protein [Mus musculus] GI:7385170; contains Pfam profile PF04635: Protein of unknown function, DUF598" 6 2 16 10 At3g62860 "esterase/lipase/thioesterase family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 6 2 16 11 At3g62920 expressed protein 6 2 16 12 At3g63100 glycine-rich protein 6 2 16 13 At3g63160 expressed protein 6 2 16 14 At3g63290 expressed protein 6 2 16 15 At3g63330 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 2 16 16 At3g63470 "serine carboxypeptidase, putative similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase" 6 2 16 17 At3g63510 nitrogen regulation family protein contains Pfam domain PF01207: Dihydrouridine synthase (Dus); similar to (SP:P45672) NIFR3-like protein (SP:P45672) [Azospirillum brasilense] 6 2 16 18 At4g02360 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 6 2 16 19 At4g02410 "lectin protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain, PF00139: Legume lectins beta domain and PF00138: Legume lectins alpha domain" 6 2 16 20 At4g02550 expressed protein 6 2 16 21 At4g02610 "tryptophan synthase, alpha subunit, putative similar to A. thaliana tryptophan synthase alpha chain (EC 4.2.1.20), GenBank accession number U18993 (gi:619753)" 6 2 16 22 At4g02760 F-box family protein contains Pfam PF00646: F-box domain; similar to leucine-rich repeats containing F-box protein FBL3 (GI:5919219) [Homo sapiens] 6 2 16 23 At4g02820 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 6 2 16 24 At4g02990 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 6 2 16 25 At4g03050 "2-oxoglutarate-dependent dioxygenase, putative (AOP3) strong similarity to AOP3 [Arabidopsis thaliana] GI:16118893; contains Pfam profile PF03171: 2OG-Fe(II) oxygenase superfamily domain; identical to cDNA AOP3 GI:16118892" 6 2 17 1 At4g07520 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 6 2 17 2 At4g07675 hypothetical protein 6 2 17 3 At4g08056 hypothetical protein 6 2 17 4 At4g08140 hypothetical protein weak similarity to SP|Q13200 26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor associated protein 2) {Homo sapiens} 6 2 17 5 At4g08290 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 6 2 17 6 At4g08330 expressed protein 6 2 17 7 At4g08510 expressed protein 6 2 17 8 At4g08560 pumilio/Puf RNA-binding domain-containing protein low similarity to RNA binding protein PufA [Dictyostelium discoideum] GI:5106561; contains Pfam profile PF00806: Pumilio-family RNA binding repeat 6 2 17 9 At4g11385 hypothetical protein 6 2 17 10 At4g11440 mitochondrial substrate carrier family protein 6 2 17 11 At4g11650 osmotin-like protein (OSM34) nearly identical to SP|P50700|OSL3_ARATH Osmotin-like protein OSM34 precursor {Arabidopsis thaliana}; contains Pfam profile PF00314: Thaumatin family 6 2 17 12 At4g11700 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 6 2 17 13 At4g11860 expressed protein contains Pfam domain PF04424: Protein of unknown function (DUF544) 6 2 17 14 At4g11920 "WD-40 repeat family protein contains 6 WD repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo sapiens}; similar to WD repeat protein Srw1 -Schizosaccharomyces pombe,PID:d1023012" 6 2 17 15 At4g12060 Clp amino terminal domain-containing protein contains Pfam profile: PF02861 Clp amino terminal domain 6 2 17 16 At4g12120 "cytokinesis-related Sec1 protein, putative similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family" 6 2 17 17 At4g14690 "chlorophyll A-B binding family protein / early light-induced protein, putative strong similarity to early light-induced protein; ELIP [Arabidopsis thaliana] GI:1872544; contains Pfam profile: PF00504 chlorophyll A-B binding protein" 6 2 17 18 At4g14716 "iron-deficiency-responsive protein, putative strong similarity to iron-deficiency induced gene [Hordeum vulgare] GI:14522834; contains Pfam profile PF03079: ARD/ARD' family" 6 2 17 19 At4g14860 ovate family protein 58% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 6 2 17 20 At4g14905 kelch repeat-containing F-box family protein contains Pfam PF01344: Kelch motif (2 copies) and PF00646: F-box domain; similar to putative SKP1 interacting partner 6 (GP:21689879) (SKIP6) {Arabidopsis thaliana}|19798784|gb|AU230074.1|AU230074 6 2 17 21 At4g15050 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 6 2 17 22 At4g15080 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 6 2 17 23 At4g15233 "ABC transporter family protein similar to pleiotropic drug resistance like protein [Nicotiana tabacum] GI:20522008, PDR5-like ABC transporter [Spirodela polyrhiza] GI:1514643; contains Pfam profile PF00005: ABC transporter" 6 2 17 24 At4g15280 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 2 17 25 At4g17740 "C-terminal processing protease, putative similar to C-terminal protease precursor [Spinacia oleracea] GI:999435; similar to SP|Q44879| (Bartonella bacilliformis)" 6 2 18 1 At4g17790 expressed protein 6 2 18 2 At4g17970 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 6 2 18 3 At4g18020 pseudo-response regulator 2 (APRR2) (TOC2) identical to pseudo-response regulator 2 GI:7576356 from [Arabidopsis thaliana] 6 2 18 4 At4g18170 WRKY family transcription factor similar to DNA-binding protein 2 GI:4322940 from [Nicotiana tabacum]; contains Pfam profile: PF03106 WRKY DNA -binding domain 6 2 18 5 At4g18230 "expressed protein predicted gene M02B7.4, Caenorhabditis elegans, PID:G1572781" 6 2 18 6 At4g18372 small nuclear ribonucleoprotein-related / snRNP-related contains similarity to snRNP-associated polypeptide N [Rattus norvegicus] GP|206694|gb|AAA42059 6 2 18 7 At4g18395 expressed protein 6 2 18 8 At4g21190 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 2 18 9 At4g21220 bacterial transferase hexapeptide repeat-containing protein similar to UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) (FirA protein) {Escherichia coli} SP|P21645; contains Pfam profile PF00132: Bacterial transferase hexapeptide (three repeats) 6 2 18 10 At4g21390 "S-locus lectin protein kinase family protein contains Pfam profiles: PF00954 S-locus glycoprotein family, PF00069 protein kinase domain, PF01453 lectin (probable mannose binding)" 6 2 18 11 At4g21450 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 6 2 18 12 At4g21585 "bifunctional nuclease, putative similar to bifunctional nuclease [Zinnia elegans] gi|4099833|gb|AAD00694" 6 2 18 13 At4g21640 subtilase family protein similar to subtilase SP1 [Oryza sativa] GI:9957714 6 2 18 14 At4g21820 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 6 2 18 15 At4g21860 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 6 2 18 16 At4g24420 "RNA recognition motif (RRM)-containing protein RRM, RNA recognition motif" 6 2 18 17 At4g24460 expressed protein 6 2 18 18 At4g24600 hypothetical protein 6 2 18 19 At4g24660 "zinc finger homeobox family protein / ZF-HD homeobox family protein hypothetical protein T8K22.16, Arabidopsis thalianachromosome II BAC T8K22, PATX:G3184285" 6 2 18 20 At4g24800 MA3 domain-containing protein similar to programmed cell death 4 protein [Gallus gallus] GI:12958564; contains Pfam profile PF02847: MA3 domain 6 2 18 21 At4g24860 "AAA-type ATPase family protein contains Pfam profile PF00004: ATPase, AAA family" 6 2 18 22 At4g25030 expressed protein 6 2 18 23 At4g25090 "respiratory burst oxidase, putative / NADPH oxidase, putative similar to respiratory burst oxidase protein A from Arabidopsis thaliana, gb:AF055353 [gi:3242781], protein D [gi:3242789]; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 6 2 18 24 At4g27652 expressed protein 6 2 18 25 At4g27690 "vacuolar protein sorting-associated protein 26, putative / VPS26, putative similar to vacuolar sorting protein 26 [Homo sapiens] GI:9622852; contains Pfam profile PF03643: Vacuolar protein sorting-associated protein 26" 6 2 19 1 At4g27850 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 2 19 2 At4g27900 expressed protein 6 2 19 3 At4g28050 "senescence-associated protein, putative similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855" 6 2 19 4 At4g28090 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 6 2 19 5 At4g28260 expressed protein 6 2 19 6 At4g28300 hydroxyproline-rich glycoprotein family protein 6 2 19 7 At4g30930 "50S ribosomal protein L21, mitochondrial (RPL21M) identical to SP|Q8L9A0 50S ribosomal protein L21, mitochondrial precursor {Arabidopsis thaliana}" 6 2 19 8 At4g30980 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 2 19 9 At4g31100 "wall-associated kinase, putative " 6 2 19 10 At4g31130 expressed protein 6 2 19 11 At4g31310 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to SP|P54121 AIG2 protein {Arabidopsis thaliana} 6 2 19 12 At4g31370 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan-protein 1 [Arabidopsis thaliana] gi|13377776|gb|AAK20857 6 2 19 13 At4g31530 expressed protein 6 2 19 14 At4g31560 expressed protein 6 2 19 15 At4g34090 expressed protein 6 2 19 16 At4g34135 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 2 19 17 At4g34260 expressed protein 6 2 19 18 At4g34290 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 6 2 19 19 At4g34450 "coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative similar to SP|Q9UBF2 Coatomer gamma-2 subunit (Gamma-2 coat protein) (Gamma-2 COP) {Homo sapiens}; contains Pfam profile: PF01602 Adaptin N terminal region" 6 2 19 20 At4g34500 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 6 2 19 21 At4g34670 40S ribosomal protein S3A (RPS3aB) 6 2 19 22 At4g34730 ribosome-binding factor A family protein contains PFam PF02033: Ribosome-binding factor A 6 2 19 23 AT5G57480 PC-1 B07 6 2 19 24 3XSSC PC-1 B19 6 2 19 25 AT1G29930 PC-1 F07 6 2 20 1 3XSSC PC-1 F19 6 2 20 2 AT3G44150 PC-1 J07 6 2 20 3 3XSSC PC-1 J19 6 2 20 4 AT4G00810 PC-1 N07 6 2 20 5 3XSSC PC-1 N19 6 2 20 6 At4g37360 "cytochrome P450 family protein cytochrome P450 monooxygenase, Arabidopsis thaliana, PID:d1029478" 6 2 20 7 At4g37420 hypothetical protein contains Pfam profile PF01697: Domain of unknown function 6 2 20 8 At4g37590 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 6 2 20 9 At4g37660 "ribosomal protein L12 family protein ribosomal protein L12, Liberobacter africanum, U09675" 6 2 20 10 At4g37810 expressed protein 6 2 20 11 At4g37870 "phosphoenolpyruvate carboxykinase [ATP], putative / PEP carboxykinase, putative / PEPCK, putative similar to phosphoenolpyruvate carboxykinase [Lycopersicon esculentum] GI:16950587, SP|Q9SLZ0 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) {Zea mays}; contains Pfam profile PF01293: phosphoenolpyruvate carboxykinase" 6 2 20 12 At4g38060 expressed protein 6 2 20 13 At4g38090 expressed protein contains Pfam PF01205: Uncharacterized protein family UPF0029 6 2 20 14 At5g01500 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 6 2 20 15 At5g01540 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 6 2 20 16 At5g01690 "cation/hydrogen exchanger, putative (CHX27) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 6 2 20 17 At5g01750 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 6 2 20 18 At5g01910 hypothetical protein 6 2 20 19 At5g01970 expressed protein 6 2 20 20 At5g02110 "cyclin family protein low similarity to cyclin D3.1 from [Lycopersicon esculentum] GI:5679622, [Nicotiana tabacum] GI:4160300; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 6 2 20 21 At5g02170 "amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 6 2 20 22 At5g04930 phospholipid-transporting ATPase 1 / aminophospholipid flippase 1 / magnesium-ATPase 1 (ALA1) nearly identical to SP|P98204 Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1) {Arabidopsis thaliana}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 6 2 20 23 At5g04970 "pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase" 6 2 20 24 At5g05120 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 6 2 20 25 At5g05180 expressed protein 6 2 21 1 At5g05330 hypothetical protein 6 2 21 2 At5g05370 "ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative strong similarity to SP|P46269 Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome C reductase complex 8.2 kDa protein) {Solanum tuberosum}" 6 2 21 3 At5g05540 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 6 2 21 4 At5g05580 "omega-3 fatty acid desaturase, chloroplast, temperature-sensitive (FAD8) identical to SP:48622 Temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) {Arabidopsis thaliana}; contains Pfam profile PF00487: Fatty acid desaturase; identical to cDNA plastid fatty acid desaturase GI:1030694" 6 2 21 5 At5g08220 expressed protein 6 2 21 6 At5g08280 "hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase identical to SP|Q43316" 6 2 21 7 At5g08420 expressed protein 6 2 21 8 At5g08480 VQ motif-containing protein contains PF05678: VQ motif 6 2 21 9 At5g08600 U3 ribonucleoprotein (Utp) family protein contains Pfam profile: PF04615 Utp14 protein 6 2 21 10 At5g08660 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668) 6 2 21 11 At5g09240 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 6 2 21 12 At5g09270 expressed protein 6 2 21 13 At5g12020 17.6 kDa class II heat shock protein (HSP17.6-CII) identical to 17.6 kDa class II heat shock protein SP:P29830 from [Arabidopsis thaliana] 6 2 21 14 At5g12060 self-incompatibility protein-related contains similarity to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 6 2 21 15 At5g12235 "CLE22, putative CLAVATA3/ESR-Related 22 (CLE22)" 6 2 21 16 At5g12290 "expressed protein similarity to NCA2 protein, yeast, PIR:S54389~Contains 'Homeobox' domain signature and profile AA305-328" 6 2 21 17 At5g12440 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 2 21 18 At5g12840 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 6 2 21 19 At5g13020 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 6 2 21 20 At5g13090 expressed protein predicted proteins - Arabidopsis thaliana 6 2 21 21 At5g15830 bZIP transcription factor family protein similar to common plant regulatory factor 7 GI:9650828 from [Petroselinum crispum]; contains Pfam profile: PF00170 bZIP transcription factor 6 2 21 22 At5g15870 glycosyl hydrolase family 81 protein similar to beta-glucan-elicitor receptor GI:1752734 from [Glycine max] 6 2 21 23 At5g16050 14-3-3 protein GF14 upsilon (GRF5) identical to 14-3-3 protein GF14 upsilon GI:2232148 from [Arabidopsis thaliana] 6 2 21 24 At5g16110 "expressed protein hypothetical protein T26J14.6 - Arabidopsis thaliana, EMBL:AC011915" 6 2 21 25 At5g16285 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 2 22 1 At5g16310 "ubiquitin carboxyl-terminal hydrolase family 1 protein similar to 26S proteasome regulatory complex subunit p37A [Drosophila melanogaster] GI:6434962; contains Pfam profile PF01088: Ubiquitin carboxyl-terminal hydrolase, family 1" 6 2 22 2 At5g16470 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 6 2 22 3 At5g16530 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 6 2 22 4 At5g19090 "heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3" 6 2 22 5 At5g19150 carbohydrate kinase family contains Pfam profile PF01256: Carbohydrate kinase 6 2 22 6 At5g19310 "homeotic gene regulator, putative similar to SP|P25439 Homeotic gene regulator (Brahma protein) {Drosophila melanogaster}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 6 2 22 7 At5g19350 "RNA-binding protein 45 (RBP45), putative " 6 2 22 8 At5g19510 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) identical to elongation factor 1B alpha-subunit [Arabidopsis thaliana] GI:6686821 6 2 22 9 At5g19570 expressed protein 6 2 22 10 At5g19750 peroxisomal membrane 22 kDa family protein similar to SP|P42925 22 kDa peroxisomal membrane protein {Mus musculus}; contains Pfam profile PF04117: Mpv17 / PMP22 family 6 2 22 11 At5g19810 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 2 22 12 At5g23130 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 6 2 22 13 At5g23190 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 6 2 22 14 At5g23330 riboflavin biosynthesis protein-related contains weak similarity to Riboflavin biosynthesis protein ribF. (Swiss-Prot:P08391) [Escherichia coli O157:H7] 6 2 22 15 At5g23390 expressed protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 6 2 22 16 At5g23520 expressed protein 6 2 22 17 At5g23575 "transmembrane protein, putative similar to cleft lip and palate transmembrane protein 1 [Homo sapiens] GI:4039014; contains Pfam profile PF05602: Cleft lip and palate transmembrane protein 1 (CLPTM1)" 6 2 22 18 At5g23750 "remorin family protein contains Pfam domain, PF03766: Remorin, N-terminal region; contains Pfam domain, PF03763: Remorin, C-terminal region" 6 2 22 19 At5g23800 agenet domain-containing protein contains Pfam PF05641: Agenet domain 6 2 22 20 At5g26690 heavy-metal-associated domain-containing protein low similarity to farnesylated protein GMFP5 [Glycine max][GI:4097571]; contains Pfam profile PF00403: Heavy-metal-associated domain 6 2 22 21 At5g26650 "MADS-box protein (AGL36) contains interpro domain: IPR002100 transcriptor factor, MADS box; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain)" 6 2 22 22 At5g26790 expressed protein 6 2 22 23 At5g26840 hypothetical protein 6 2 22 24 At5g27020 hypothetical protein 6 2 22 25 At5g27090 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL54 6 2 23 1 At5g27290 "expressed protein predicted proteins, Arabidopsis thaliana" 6 2 23 2 At5g27350 sugar-porter family protein 1 (SFP1) identical to sugar-porter family protein 1 [Arabidopsis thaliana] GI:14585699 6 2 23 3 At5g35390 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase PRK1, Lycopersicon esculentum, PIR:T07865" 6 2 23 4 At5g35470 hypothetical protein 6 2 23 5 At5g35620 eukaryotic translation initiation factor 4E 2 / eIF-4E2 / mRNA cap-binding protein 2 (EIF4E2) identical to SP|O04663 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(ISO)4F P28 subunit) (eIF4Eiso protein) {Arabidopsis thaliana} 6 2 23 6 At5g35650 hypothetical protein 6 2 23 7 At5g35790 "glucose-6-phosphate 1-dehydrogenase / G6PD (APG1) identical to SP|Q43727 Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (EC 1.1.1.49) (G6PD) {Arabidopsis thaliana}" 6 2 23 8 At5g35840 phytochrome C (PHYC) identical to SP|P14714 Phytochrome C {Arabidopsis thaliana} 6 2 23 9 At5g36010 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 6 2 23 10 At5g36060 hypothetical protein 6 2 23 11 At5g39270 "expansin, putative (EXP22) similar to expansin - Prunus armeniaca, EMBL:U93167; alpha-expansin gene family, PMID:11641069" 6 2 23 12 At5g39330 expressed protein ; expression supported by MPSS 6 2 23 13 At5g39510 vesicle transport v-SNARE 11 (VTI11) / vesicle soluble NSF attachment protein receptor VTI1a (VTI1A) identical to SP|Q9SEL6 Vesicle transport v-SNARE 11 (AtVTI11) (Vesicle transport v-SNARE protein VTI1a) (Vesicle soluble NSF attachment protein receptor VTI1a) (AtVTI1a) {Arabidopsis thaliana} 6 2 23 14 At5g39570 expressed protein 6 2 23 15 At5g39750 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL81 6 2 23 16 At5g39810 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 6 2 23 17 At5g39970 expressed protein low similarity to up-regulated by thyroid hormone in tadpoles; expressed specifically in the tail and only at metamorphosis; membrane bound or extracellular protein; C-terminal basic region [Xenopus laevis] GI:1234787 6 2 23 18 At5g40030 "protein kinase, putative similar to stpk1 protein kinase [Solanum tuberosum] gi|1200256|emb|CAA62476" 6 2 23 19 At5g42820 "U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary factor, small subunit [Oryza sativa] GI:3850816" 6 2 23 20 At5g42850 expressed protein 6 2 23 21 At5g42957 expressed protein 6 2 23 22 At5g43000 hypothetical protein 6 2 23 23 At5g43175 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 2 23 24 At5g43220 hypothetical protein similar to unknown protein (gb|AAF03435.1) 6 2 23 25 At5g43390 hypothetical protein strong similarity to unknown protein (emb|CAB86628.1) 6 2 24 1 At5g43440 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 6 2 24 2 At5g46025 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 6 2 24 3 At5g46080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 2 24 4 At5g46190 KH domain-containing protein strong similarity to unknown protein (pir||T04533) 6 2 24 5 At5g46250 RNA recognition motif (RRM)-containing protein contains similarity to RNA-binding protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 6 2 24 6 At5g46390 "peptidase S41 family protein similar to C-terminal peptidase of the D1 protein [Hordeum vulgare subsp vulgare] GI:1296805; contains Pfam profiles PF03572: Peptidase family S41B, PF00595: PDZ domain (Also known as DHR or GLGF)" 6 2 24 7 At5g46430 60S ribosomal protein L32 (RPL32B) 6 2 24 8 At5g46610 hypothetical protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 6 2 24 9 At5g46650 "zinc finger (C3HC4-type RING finger) family protein contains similarity to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 6 2 24 10 At5g49270 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region 6 2 24 11 At5g49330 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA binding domain; identical to cDNA putative transcription factor (At5g49330) GI:15420625 6 2 24 12 At5g49500 signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B) identical to SP|P49966 Signal recognition particle 54 kDa protein 2 (SRP54) {Arabidopsis thaliana} 6 2 24 13 At5g49550 expressed protein 6 2 24 14 At5g49690 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 2 24 15 At5g49730 ferric reductase-like transmembrane component family protein similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane componenent 6 2 24 16 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 6 2 24 17 At5g49960 expressed protein ; expression supported by MPSS 6 2 24 18 At5g52700 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 6 2 24 19 At5g52760 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 6 2 24 20 At5g52940 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 6 2 24 21 At5g52980 expressed protein 6 2 24 22 At5g53130 "cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC1) almost identical to cyclic nucleotide-regulated ion channel 1 pir:T51354, GI:11357236 from [Arabidopsis thaliana]" 6 2 24 23 At5g53180 "polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Rattus norvegicus} SP|Q00438, {Homo sapiens} SP|P26599; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 6 2 24 24 At5g53360 seven in absentia (SINA) family protein low similarity to siah-1A protein [Mus musculus] GI:297035; contains Pfam profile PF03145: Seven in absentia protein family 6 2 24 25 At5g53420 expressed protein 6 2 25 1 At5g56080 "nicotianamine synthase, putative similar to nicotianamine synthase [Lycopersicon esculentum][GI:4753801], nicotianamine synthase 2 [Hordeum vulgare][GI:4894912]" 6 2 25 2 At5g56140 KH domain-containing protein 6 2 25 3 At5g56300 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:jasmonic acid carboxyl methyltransferase (JMT)[GI:13676829] and to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] 6 2 25 4 At5g56350 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 6 2 25 5 At5g56520 expressed protein 6 2 25 6 At5g56580 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK6) similar to NQK1 MAPKK [Nicotiana tabacum] gi|12718822|dbj|BAB32405; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 6 2 25 7 At5g56760 serine O-acetyltransferase (SAT-52) identical to GI:905391 6 2 25 8 At5g56820 F-box family protein contains F-box domain Pfam:PF00646 6 2 25 9 At5g59350 "expressed protein predicted protein, Arabidopsis thaliana" 6 2 25 10 At5g59400 "expressed protein predicted protein, Arabidopsis thaliana" 6 2 25 11 At5g59540 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to desacetoxyvindoline-4-hydroxylase [Catharanthus roseus] GI:2352812; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 6 2 25 12 At5g59600 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 6 2 25 13 At5g59780 myb family transcription factor (MYB59) contains PFAM profile: myb DNA binding domain PF00249 6 2 25 14 At5g59830 expressed protein 6 2 25 15 At5g59950 "RNA and export factor-binding protein, putative " 6 2 25 16 At5g60000 hypothetical protein 6 2 25 17 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 6 2 25 18 At5g62730 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 2 25 19 At5g62890 "permease, putative similar to permease 1 [Zea mays] GI:7844006; contains Pfam profile: PF00860 Xanthine/uracil permeases family; identical to cDNA putative permease 1 (MQB2.21) GI:21326024" 6 2 25 20 At5g62950 expressed protein 6 2 25 21 At5g63090 "LOB domain protein / lateral organ boundaries protein (LOB) identical to LOBa [Arabidopsis thaliana] GI:17484100, SP|Q9FML4 LATERAL ORGAN BOUNDARIES protein {Arabidopsis thaliana}" 6 2 25 22 At5g63130 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 6 2 25 23 At5g63310 "nucleotide diphosphate kinase II, chloroplast (NDPK2) identical to SP|O64903 Nucleoside diphosphate kinase II, chloroplast precursor (NDK II) (NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis thaliana]; contains Pfam PF00334 : Nucleoside diphosphate kinase domain; contains Pfam profile PF00334: Nucleoside diphosphate kinase" 6 2 25 24 At5g63380 "4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to 4CL2 [gi:12229665] from Arabidopsis thaliana, 4CL1 [gi:12229631] from Nicotiana tabacum; contains Pfam AMP-binding enzyme domain PF00501" 6 2 25 25 At5g65925 expressed protein 6 2 26 1 At5g65980 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 6 2 26 2 At5g66055 ankyrin repeat protein / AKRP (AKR) identical to ankyrin repeat protein (AKRP) [Arabidopsis thaliana] SWISS-PROT:Q05753 6 2 26 3 At5g66090 expressed protein 6 2 26 4 At5g66240 "transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak); similar to Will die slowly protein. {Drosophila melanogaster} (SP:Q9V3J8) {Drosophila melanogaster}" 6 2 26 5 At5g66260 "auxin-responsive protein, putative GP:10185816 auxin-induced protein TGSAUR12 {Tulipa gesneriana)" 6 2 26 6 At5g66400 dehydrin (RAB18) nearly identical to SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana} 6 2 26 7 At5g66460 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 6 2 26 8 3xSSC 3xSSC 6 2 26 9 3xSSC 3xSSC 6 2 26 10 3xSSC 3xSSC 6 2 26 11 3xSSC 3xSSC 6 2 26 12 3xSSC 3xSSC 6 2 26 13 3xSSC 3xSSC 6 2 26 14 3xSSC 3xSSC 6 2 26 15 3xSSC 3xSSC 6 2 26 16 At3g45590 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 6 2 26 17 At3g45650 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 2 26 18 At3g45810 "ferric reductase-like transmembrane component family protein similar to respiratory burst oxidase protein D RbohD from Arabidopsis thaliana, EMBL:AF055357 [gi:3242789], similar to respiratory burst oxidase protein D RbohD from Arabidopsis thaliana, EMBL:AF055357 [gi:3242789], respiratory burst oxidase homolog from Solanum tuberosum [GI:16549089]; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 6 2 26 19 At3g45870 "integral membrane family protein / nodulin MtN21-related simlar to MtN21 GI:2598575 (root nodule development) Medicago truncatula, EMBL:MTY15293" 6 2 26 20 At3g46050 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 6 2 26 21 At3g46110 expressed protein 6 2 26 22 At3g46300 hypothetical protein 6 2 26 23 At3g46360 hypothetical protein 6 2 26 24 Blank Blank 6 2 26 25 Blank Blank 6 3 1 1 atc03 Randomly generated negative control 6 3 1 2 atc09 Randomly generated negative control 6 3 1 3 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 6 3 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 6 3 1 5 Alien5 Control: Stratagene Spotreport Alien Oligo 6 3 1 6 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 6 3 1 7 atc07 Randomly generated negative control 6 3 1 8 Alien1 Control: Stratagene Spotreport Alien Oligo 6 3 1 9 At1g01120 fatty acid elongase 3-ketoacyl-CoA synthase 1 (KCS1) nearly identical to GB:AAC99312 GI:4091810 from [Arabidopsis thaliana] 6 3 1 10 At1g01160 SSXT protein-related / transcription co-activator-related similar to SYT/SSX4 fusion protein (GI:11127695) [Homo sapiens]; supporting cDNA gi|21539891|gb|AY102640.1|; contains Pfam profile PF05030: SSXT protein (N-terminal region) 6 3 1 11 At1g01350 "zinc finger (CCCH-type/C3HC4-type RING finger) family protein similar to SP|O15541 Zinc finger protein 183 {Homo sapiens}; contains Pfam profiles PF04396: Protein of unknown function, DUF537, PF00097: Zinc finger, C3HC4 type (RING finger), PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 3 1 12 At1g01410 hypothetical protein 6 3 1 13 At1g01580 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile: PF01794 ferric reductase like transmembrane component" 6 3 1 14 At1g01640 speckle-type POZ protein-related contains Pfam profile:PF00651 BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 6 3 1 15 At1g01800 short-chain dehydrogenase/reductase (SDR) family protein similar to carbonyl reductase GI:1049108 from [Mus musculus] 6 3 1 16 At1g01880 "DNA repair protein, putative similar to Swiss-Prot:P28706 DNA repair protein rad13 [Schizosaccharomyces pombe]; similar to UV hypersensitive protein [Arabidopsis thaliana] gi|13649704|gb|AAK37472" 6 3 1 17 At1g04445 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 6 3 1 18 At1g04510 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] 6 3 1 19 At1g04640 biotin/lipoate A/B protein ligase family protein similar to lipoyltransferase (LIP2p) [Arabidopsis thaliana] GI:15887052; contains Pfam profile PF03099: Biotin/lipoate A/B protein ligase family 6 3 1 20 At1g04690 "potassium channel protein, putative nearly identical to K+ channel protein [Arabidopsis thaliana] GI:1063415; contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 6 3 1 21 At1g04870 protein arginine N-methyltransferase family protein similar to SP|Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens} 6 3 1 22 At1g04930 hydroxyproline-rich glycoprotein family protein Common family member: At2g32840 [Arabidopsis thaliana] 6 3 1 23 At1g05070 expressed protein 6 3 1 24 At1g05140 "membrane-associated zinc metalloprotease, putative similar to Hypothetical zinc metalloprotease All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.}; Similar to Synechocystis hypothetical protein (gb|D90908);contains Pfam PF00595: PDZ domain (Also known as DHR or GLGF); contains TIGRFAM TIGR00054: membrane-associated zinc metalloprotease, putative" 6 3 1 25 At1g07710 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 6 3 2 1 At1g07750 "cupin family protein similar to legumin (11S-globulin) from Ginkgo biloba [GI:949869], 11S globulin from Avena sativa [GI:472867]" 6 3 2 2 At1g07860 expressed protein 6 3 2 3 At1g07910 "expressed protein identical to GB:AAB07881 AT.I.24-9 gene product from [Arabidopsis thaliana] (Mol. Gen. Genet. 219 (1-2), 106-112 (1989))" 6 3 2 4 At1g08035 expressed protein ; expression supported by MPSS 6 3 2 5 At1g08080 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 6 3 2 6 At1g08220 expressed protein 6 3 2 7 At1g08270 expressed protein low similarity to SP|P46467 SKD1 protein (Vacuolar sorting protein 4b) {Mus musculus} 6 3 2 8 At1g10840 eukaryotic translation initiation factor 3 subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to SP|Q9C5Z2 Eukaryotic translation initiation factor 3 subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) {Arabidopsis thaliana}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 6 3 2 9 At1g10900 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 6 3 2 10 At1g11080 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)] 6 3 2 11 At1g11145 hypothetical protein 6 3 2 12 At1g11300 "S-locus lectin protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954" 6 3 2 13 At1g11360 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family domain; similar to ethylene-responsive ER6 protein (GI:5669654) [Lycopersicon esculentum] 6 3 2 14 At1g11490 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 6 3 2 15 At1g11545 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endo-xyloglucan transferase GI:2244732 from [Gossypium hirsutum]" 6 3 2 16 At1g14320 60S ribosomal protein L10 (RPL10A) / Wilm's tumor suppressor protein-related similar to tumor suppressor GI:575354 from [Oryza sativa] 6 3 2 17 At1g14370 protein kinase (APK2a) identical to protein kinase APK2a GI:2852447 from [Arabidopsis thaliana] 6 3 2 18 At1g14530 "tobamovirus multiplication protein 3, putative / TOM3, putative (THH1) identical to THH1 (GI:15706301) [Arabidopsis thaliana]; supporting cDNA gi|15706300|dbj|AB057678.1|" 6 3 2 19 At1g14580 "zinc finger (C2H2 type) family protein similar to zinc finger protein ID1 GB:AAC18941 GI:3170601 from [Zea mays] contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 3 2 20 At1g14720 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR2) identical to endoxyloglucan transferase [Arabidopsis thaliana] GI:5533311 6 3 2 21 At1g14770 expressed protein 6 3 2 22 At1g14910 "epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Chain A, Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2 Complex (GP:13399999) {Homo sapiens}" 6 3 2 23 At1g14970 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 6 3 2 24 At1g17650 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein low similarity to SP|P23523 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) {Escherichia coli}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase 6 3 2 25 At1g17710 expressed protein 6 3 3 1 At1g17830 expressed protein 6 3 3 2 At1g17890 "GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase, putative similar to GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1)GI:6016479 from [Arabidopsis thaliana]" 6 3 3 3 At1g18070 "EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032" 6 3 3 4 At1g18150 "mitogen-activated protein kinase, putative / MAPK, putative (MPK8) identical to ATMPK8 [Arabidopsis thaliana] gi|7106542|dbj|BAA92222; mitogen-activated protein kinase (MAPK), PMID:12119167; similar to mitogen-activated protein kinase GI:5815410 from (Oryza sativa)" 6 3 3 5 At1g18330 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 6 3 3 6 At1g18380 expressed protein 6 3 3 7 At1g21270 wall-associated kinase 2 (WAK2) identical to wall-associated kinase 2 [Arabidopsis thaliana] GI:4826399; induced by salicylic acid or INA (PMID:10380805) 6 3 3 8 At1g21326 VQ motif-containing protein contains PF05678: VQ motif 6 3 3 9 At1g21500 expressed protein 6 3 3 10 At1g21560 expressed protein 6 3 3 11 At1g21720 "20S proteasome beta subunit C1 (PBC1) (PRCT) almost identical to GB:AAC32069 from [Arabidopsis thaliana], EST gb|T76747 comes from this gene; identical to cDNA proteasome subunit prct GI:2511567" 6 3 3 12 At1g21760 "F-box family protein Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from this gene similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250" 6 3 3 13 At1g21950 hypothetical protein 6 3 3 14 At1g22010 hypothetical protein 6 3 3 15 At1g24580 zinc finger (C3HC4-type RING finger) family protein 6 3 3 16 At1g24625 "zinc finger (C2H2 type) family protein (ZFP7) identical to zinc finger protein, ZFP7 gi|790685|gb|AAA87303; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 3 3 17 At1g25250 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 6 3 3 18 At1g25280 F-box family protein / tubby family protein similar to Tubby protein homolog (SP:O88808) [Rattus norvegicus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family; 6 3 3 19 At1g25440 zinc finger (B-box type) family protein similar to zinc finger protein GI:3618318 from [Oryza sativa] 6 3 3 20 At1g25500 choline transporter-related contains weak similarity to CD92 protein [Homo sapiens] gi|16945323|emb|CAC82175 6 3 3 21 At1g26140 hypothetical protein 6 3 3 22 At1g26210 expressed protein similar to hypothetical protein GI:6524175 from [Arabidopsis thaliana] 6 3 3 23 At1g29080 peptidase C1A papain family protein contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]; contains Pfam profile PF00112: Papain family cysteine protease 6 3 3 24 At1g29150 "26S proteasome regulatory subunit, putative (RPN6) similar to 19S proteosome subunit 9 GB:AAC34120 GI:3450889 from [Arabidopsis thaliana]" 6 3 3 25 At1g29340 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 6 3 4 1 At1g29390 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 6 3 4 2 At1g29540 hypothetical protein 6 3 4 3 At1g29600 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 3 4 4 At1g29790 expressed protein 6 3 4 5 At1g29850 double-stranded DNA-binding family protein contains Pfam profile: PF01984 double-stranded DNA-binding domain 6 3 4 6 At1g32700 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 6 3 4 7 At1g32740 expressed protein 6 3 4 8 At1g32940 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 6 3 4 9 At1g32990 ribosomal protein L11 family protein similar to chloroplast ribosomal protein L11 GI:21312 from [Spinacia oleracea] 6 3 4 10 At1g33140 60S ribosomal protein L9 (RPL90A/C) similar to RIBOSOMAL PROTEIN L9 GB:P49209 from [Arabidopsis thaliana] 6 3 4 11 At1g33260 protein kinase family protein contains Pfam profile: PF00069: Eukaryotic protein kinase domain 6 3 4 12 At1g33440 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 3 4 13 At1g33500 hypothetical protein 6 3 4 14 At1g42980 formin homology 2 domain-containing protein / FH2 domain-containing protein contains Pfam profile PF02181: Formin Homology 2 Domain 6 3 4 15 At1g43080 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 6 3 4 16 At1g43590 "hypothetical protein contains Pfam domain, PF04827: Protein of unknown function (DUF635)" 6 3 4 17 At1g43650 integral membrane family protein / nodulin MtN21-related similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula]similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 6 3 4 18 At1g43800 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Lupinus luteus GI:4704824, Asclepias syriaca GI:1762436, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 6 3 4 19 At1g43890 "Ras-related GTP-binding protein, putative similar to GTP-binding protein(RAB1Y) GI:1370173 from (Lotus japonicus)" 6 3 4 20 At1g44110 "cyclin, putative similar to mitotic cyclin a2-type [Glycine max] GI:857397, cyclin A-like protein [Nicotiana tabacum] GI:1064927; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 6 3 4 21 At1g44180 "aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative similar to aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase, ACY-1) [Homo sapiens] SWISS-PROT:Q03154" 6 3 4 22 At1g49245 expressed protein 6 3 4 23 At1g49310 expressed protein 6 3 4 24 At1g49500 expressed protein 6 3 4 25 At1g49570 "peroxidase, putative identical to peroxidase ATP5a [Arabidopsis thaliana] gi|1546702|emb|CAA67341; similar to peroxidase SWISS-PROT:P80679 from [Armoracia rusticana]" 6 3 5 1 At1g49740 expressed protein similar to MAP3K-like protein kinase GB:CAB16796 GI:4006878 from [Arabidopsis thaliana] 6 3 5 2 At1g49800 hypothetical protein 6 3 5 3 At1g49950 "DNA-binding protein, putative contains similarity to DNA-binding protein PcMYB1 [Petroselinum crispum] gi|2224899|gb|AAB61699" 6 3 5 4 At1g50000 hypothetical protein contains Pfam profile PF04452: Protein of unknown function (DUF558) 6 3 5 5 At1g52870 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:Q07066 22 kDa peroxisomal membrane protein [Rattus norvegicus] 6 3 5 6 At1g52910 expressed protein 6 3 5 7 At1g53080 legume lectin family protein 6 3 5 8 At1g53140 dynamin family protein low similarity to dynamin-like protein E [Arabidopsis thaliana] GI:19423872; contains Pfam profile PF00350: Dynamin family 6 3 5 9 At1g53290 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase ;contains similarity to Avr9 elicitor response protein GI:4138265 from [Nicotiana tabacum] 6 3 5 10 At1g53340 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 6 3 5 11 At1g53500 "NAD-dependent epimerase/dehydratase family protein low similarity to dTDP-D-glucose-4,6-dehydratase from Aneurinibacillus thermoaerophilus GI:16357461, Sphingomonas sp. GI:1314581; contains Pfam profile PF01370: NAD dependent epimerase/dehydratase family; putative NDP-rhamnose synthase (rhm2 gene) GI:31559258" 6 3 5 12 At1g53560 expressed protein 6 3 5 13 At1g56150 auxin-responsive family protein similar to SP:P33082 Auxin-induced protein X15. [Soybean] {Glycine max} 6 3 5 14 At1g56210 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579] and farnesylated proteins ATFP3 [GI:4097547] and GMFP7 [Glycine max][GI:4097573]; contains PF00403 Heavy-metal-associated domain 6 3 5 15 At1g56350 "peptide chain release factor, putative similar to SP|P28353 Peptide chain release factor 2 (RF-2). {Salmonella typhi}; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 6 3 5 16 At1g56420 expressed protein ; expression supported by MPSS 6 3 5 17 At1g56620 pectinesterase inhibitor domain-containing protein 6 3 5 18 At1g56690 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 6 3 5 19 At1g57630 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 6 3 5 20 At1g57700 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 6 3 5 21 At1g61580 60S ribosomal protein L3 (RPL3B) identical to ribosomal protein GI:806279 from [Arabidopsis thaliana] 6 3 5 22 At1g61640 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 6 3 5 23 At1g61810 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase (GI:3820531) [Pinus contorta]; similar to beta-glucosidase GI:804655 from (Hordeum vulgare) 6 3 5 24 At1g61860 "protein kinase, putative similar to protein kinase GI:9294282 from [Arabidopsis thaliana]" 6 3 5 25 At1g62040 "autophagy 8c (APG8c) identical to autophagy 8c [Arabidopsis thaliana] GI:19912155; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 6 3 6 1 At1g62085 mitochondrial transcription termination factor family protein / mTERF family protein contains Pfam profile PF02536: mTERF 6 3 6 2 At1g62280 C4-dicarboxylate transporter/malic acid transport family protein contains Pfam profile PF03595: C4-dicarboxylate transporter/malic acid transport protein 6 3 6 3 At1g62330 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 6 3 6 4 At1g65050 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 6 3 6 5 At1g65090 expressed protein 6 3 6 6 At1g65240 "aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease profile; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 6 3 6 7 At1g65280 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 6 3 6 8 At1g65430 zinc finger protein-related contains weak similarity to zinc finger proteins and a Pfam:PF01485 IBR domain 6 3 6 9 At1g65490 expressed protein 6 3 6 10 At1g65690 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related similar to hin1 homolog (GI:13122296) [Arabidopsis thaliana]; similar to hin1 (GI:22830759) [Nicotiana tabacum]; contains 1 transmembrane domain; 6 3 6 11 At1g65760 F-box family protein contains F-box domain Pfam:PF00646 6 3 6 12 At1g68490 expressed protein 6 3 6 13 At1g68530 "very-long-chain fatty acid condensing enzyme (CUT1) identical to very-long-chain fatty acid condensing enzyme (CUT1) GB:AF129511 (required for cuticular wax biosynthesis and pollen fertility: Millar,A.A., et al., Plant Cell (1999))" 6 3 6 14 At1g68680 expressed protein 6 3 6 15 At1g68740 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 6 3 6 16 At1g68900 "mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein / hydrolase, alpha/beta fold family protein contains Pfam profiles PF01188: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain, PF00561: hydrolase, alpha/beta fold family" 6 3 6 17 At1g68935 expressed protein 6 3 6 18 At1g69120 floral homeotic protein APETALA1 (AP1) / agamous-like MADS box protein (AGL7) identical to SP|P35631 Floral homeotic protein APETALA1 (AGL7 protein) {Arabidopsis thaliana} 6 3 6 19 At1g69200 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 6 3 6 20 At1g71910 expressed protein 6 3 6 21 At1g71970 expressed protein 6 3 6 22 At1g72130 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 3 6 23 At1g72175 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 3 6 24 At1g72350 MADS-box protein (AGL60) contains Pfam profile: PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 6 3 6 25 At1g72420 "chaperone-related similar to Complex I intermediate-associated protein 30, mitochondrial precursor (CGI-65) (Swiss-Prot:Q9Y375) [Homo sapiens]; similar to Probable complex I intermediate-associated protein 30 (Swiss-Prot:Q9LQI7) [Arabidopsis thaliana]" 6 3 7 1 At1g72580 hypothetical protein 6 3 7 2 At1g72640 expressed protein 6 3 7 3 AT5G57480 PC-1 C07 6 3 7 4 3XSSC PC-1 C19 6 3 7 5 AT1G29930 PC-1 G07 6 3 7 6 3XSSC PC-1 G19 6 3 7 7 AT3G44150 PC-1 K07 6 3 7 8 3XSSC PC-1 K19 6 3 7 9 AT4G00810 PC-1 O07 6 3 7 10 3XSSC PC-1 O19 6 3 7 11 At1g75410 BEL1-like homeodomain 3 protein (BLH3) identical to BEL1-like homeodomain 3 (GI:13877515) [Arabidopsis thaliana] 6 3 7 12 At1g75470 "purine permease-related contains Pfam profile PF03151: Domain of unknown function, DUF250; low similarity to purine permease [Arabidopsis thaliana] GI:7620007" 6 3 7 13 At1g75680 "glycosyl hydrolase family 9 protein similar to endo-beta-1,4-glucanase GB:AAC12685 GI:3025470 from [Pinus radiata]" 6 3 7 14 At1g75750 gibberellin-regulated protein 1 (GASA1) / gibberellin-responsive protein 1 identical to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; supporting cDNA gi|887938|gb|U11766.1|ATU11766 6 3 7 15 At1g75910 family II extracellular lipase 4 (EXL4) EXL4 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana (Mouse-ear cress)] 6 3 7 16 At1g75980 expressed protein 6 3 7 17 At1g76140 "prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative similar to SP|Q9QUR6 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) {Mus musculus}; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF02897: Prolyl oligopeptidase, N-terminal beta-propeller domain" 6 3 7 18 At1g76190 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 6 3 7 19 At1g78815 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 6 3 7 20 At1g78870 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 6 3 7 21 At1g79000 "p300/CBP acetyltransferase-related protein 2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger and PF00569: Zinc finger, ZZ type; identical to cDNA p300/CBP acetyltransferase-related protein 2 GI:12597460" 6 3 7 22 At1g79060 expressed protein 6 3 7 23 At1g79230 mercaptopyruvate sulfurtransferase (MST1) (RDH1) identical to mercaptopyruvate sulfurtransferase GI:6009981 and thiosulfate sulfurtransferase GI:5834508 from [Arabidopsis thaliana] 6 3 7 24 At1g79320 "latex abundant protein, putative (AMC5) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain" 6 3 7 25 At1g79460 ent-kaurene synthase / ent-kaurene synthetase B (KS) (GA2) identical to GI:3056725 [PMID:9536043]; formerly called ent-kaurene synthetase B 6 3 8 1 At1g79510 expressed protein 6 3 8 2 At2g02100 "plant defensin-fusion protein, putative (PDF2.2) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to SWISS-PROT:O65740" 6 3 8 3 At2g02170 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 6 3 8 4 At2g02400 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 6 3 8 5 At2g02470 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 6 3 8 6 At2g02650 reverse transcriptase-related similar to reverse transcriptase [Arabidopsis thaliana] GI:976278 6 3 8 7 At2g02720 pectate lyase family protein similar to pectate lyase P59 SP:P15722 from [Lycopersicon esculentum] 6 3 8 8 At2g02870 "kelch repeat-containing F-box family protein weak similarity to Kelch-like protein 5 (Swiss-Prot:Q96PQ7) [Homo sapiens]; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 3 8 9 At2g02955 expressed protein ; expression supported by MPSS 6 3 8 10 At2g06500 hAT dimerisation domain-containing protein / transposase-related low similarity to transposase [Ipomoea purpurea] AB004906 GI:4063770 6 3 8 11 At2g06610 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 6 3 8 12 At2g06990 "HUA enhancer 2 (HEN2) / DExH-box RNA helicase, putative nearly identical to HUA enhancer 2 [Arabidopsis thaliana] GI:16024936" 6 3 8 13 At2g07090 expressed protein 6 3 8 14 At2g07360 SH3 domain-containing protein contains Pfam profile PF00018: SH3 domain 6 3 8 15 At2g07630 hypothetical protein 6 3 8 16 At2g07772 expressed protein 6 3 8 17 At2g07695 "cytochrome c oxidase subunit II, putative similar to cytochrome c oxidase subunit II [Brassica rapa] GI:2707741; contains Pfam profile PF02790: Cytochrome C oxidase subunit II, transmembrane domain" 6 3 8 18 At2g15310 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor (GI:861205) [Chlamydomonas reinhardtii]" 6 3 8 19 At2g15350 "xyloglucan fucosyltransferase, putative (FUT10) identical to SP|Q9SJP6 Putative fucosyltransferase 10 (EC 2.4.1.-) (AtFUT10) (Fragment) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from [Arabidopsis thaliana]" 6 3 8 20 At2g15530 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 6 3 8 21 At2g15590 expressed protein 6 3 8 22 At2g15770 glycine-rich protein contains a domain related to blue copper-binding protein; similar to Stellacyanin (SP:P00302) {Rhus vernicifera} 6 3 8 23 At2g15830 expressed protein 6 3 8 24 At2g16070 expressed protein 6 3 8 25 At2g16140 expressed protein contains similarity to hypothetical proteins 6 3 9 1 At2g18950 homogentisate phytylprenyltransferase family protein (HPT1) / tocopherol phytyltransferase family protein (TPT1) identical to gi:17104828; contains Pfam profile PF01040: UbiA prenyltransferase family; identical to cDNA tocopherol polyprenyltransferase (TPT1) GI:17104827 6 3 9 2 At2g19010 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 6 3 9 3 At2g19210 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 6 3 9 4 At2g19280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 3 9 5 At2g19470 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 6 3 9 6 At2g19530 expressed protein and grail; expression supported by MPSS 6 3 9 7 At2g19670 "protein arginine N-methyltransferase, putative similar to protein arginine N-methyltransferase 1-variant 1 [Homo sapiens] GI:7453577" 6 3 9 8 At2g19730 60S ribosomal protein L28 (RPL28A) 6 3 9 9 At2g22425 "expressed protein weak similarity to Swiss-Prot:Q9Y6A9 microsomal signal peptidase 12 kDa subunit (SPase 12 kDa subunit, SPC12, HSPC033) [Homo sapiens]" 6 3 9 10 At2g22475 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 6 3 9 11 At2g22670 auxin-responsive protein / indoleacetic acid-induced protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 6 3 9 12 At2g22730 "transporter-related low similarity to spinster membrane proteins from [Drosophila melanogaster] GI:12003974, GI:12003976, GI:12003972, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein" 6 3 9 13 At2g22900 "galactosyl transferase GMA12/MNN10 family protein very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 6 3 9 14 At2g22950 "calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) identical to SP|O64806 Potential calcium-transporting ATPase 7, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong similarity to SP|O81108 Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) {Arabidopsis thaliana}" 6 3 9 15 At2g23080 "casein kinase II alpha chain, putative identical to probable casein kinase II, alpha chain [Arabidopsis thaliana] SWISS-PROT:O64817; similar to casein kinase II, alpha chain 1 [Arabidopsis thaliana] SWISS-PROT:Q08467" 6 3 9 16 At2g23110 expressed protein 6 3 9 17 At2g26000 "zinc finger (C3HC4-type RING finger) family protein similar to BRCA1-associated protein 2 [Homo sapiens] GI:3252872; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF02148: Zn-finger in ubiquitin-hydrolases and other protein" 6 3 9 18 At2g26040 "Bet v I allergen family protein similar to ribonucleases from {Panax ginseng} SP|P80890, SP|P80889, SP|Q05736 Pathogenesis-related protein 1 (AOPR1) {Asparagus officinalis}; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 6 3 9 19 At2g26230 "uricase / urate oxidase / nodulin 35, putative identical to uricase SP:O04420 from [Arabidopsis thaliana]" 6 3 9 20 At2g26290 "protein kinase, putative similar to auxin-regulated dual specificity cytosolic kinase [Lycopersicon esculentum] gi|14484938|gb|AAK62821" 6 3 9 21 At2g26470 "expressed protein contains PF02586: Uncharacterized ACR, COG2135; weak similarity to NF-M protein (GI:205688) [Rattus norvegicus]" 6 3 9 22 At2g26510 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 6 3 9 23 At2g26670 "heme oxygenase 1 (HO1) (HY1) identical to plastid heme oxygenase (HY1) [Arabidopsis thaliana] GI:4877362, heme oxygenase 1 [Arabidopsis thaliana] GI:4530591 GB:AF132475; annotation updated per Seth J. Davis at University of Wisconsin-Madison" 6 3 9 24 At2g26720 "plastocyanin-like domain-containing protein / mavicyanin, putative similar to mavicyanin SP:P80728 from [Cucurbita pepo]" 6 3 9 25 At2g29390 "sterol 4-alpha-methyl-oxidase 1 (SMO1) nearly identical to sterol 4-alpha-methyl-oxidase GI:16973469 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase (SMO) partial cds, GI:16973431" 6 3 10 1 At2g29440 "glutathione S-transferase, putative " 6 3 10 2 At2g29600 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 3 10 3 At2g29640 josephin family protein contains Pfam domain PF02099: Josephin; similar to Josephin-like protein (Swiss-Prot:O82391) [Arabidopsis thaliana] 6 3 10 4 At2g29800 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 3 10 5 At2g29860 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 3 10 6 At2g30000 expressed protein contains Pfam domain PF03660: Uncharacterised protein family (UPF0123) 6 3 10 7 At2g30070 "potassium transporter (KUP1) identical to potassium transporter [Arabidopsis thaliana] gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family member, PMID:11500563" 6 3 10 8 At2g32700 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] 6 3 10 9 At2g32730 "26S proteasome regulatory subunit, putative contains similarity to 26S proteasome regulatory subunit S1 SP:O88761, GI:3288594 from [Rattus norvegicus]" 6 3 10 10 At2g32870 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 6 3 10 11 At2g32920 thioredoxin family protein similar to SP|Q15084 Protein disulfide isomerase A6 precursor (EC 5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085: Thioredoxin 6 3 10 12 At2g33100 cellulose synthase family protein similar to gi:2827143 from Arabidopsis thaliana (Ath-B) 6 3 10 13 At2g33170 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor protein kinase [Pinus sylvestris] gi|12054894|emb|CAC20842; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 6 3 10 14 At2g33310 auxin-responsive protein / indoleacetic acid-induced protein 13 (IAA13) identical to SP|Q38831 Auxin-responsive protein IAA13 (Indoleacetic acid-induced protein 13) {Arabidopsis thaliana} 6 3 10 15 At2g33350 hypothetical protein 6 3 10 16 At2g35940 "homeodomain-containing protein contains 'Homeobox' domain signature, Prosite:PS00027" 6 3 10 17 At2g36000 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 6 3 10 18 At2g36110 3'-5' exonuclease domain-containing protein contains Pfam profile PF01612: 3'-5' exonuclease 6 3 10 19 At2g36190 "beta-fructosidase, putative / beta-fructofuranosidase, putative similar to beta-fructofuranosidase GI:18324 from [Daucus carota]" 6 3 10 20 At2g36350 "protein kinase, putative similar to protein kinase KIPK (KCBP-interacting protein kinase) [Arabidopsis thaliana] gi|7716430|gb|AAF68383" 6 3 10 21 At2g36402 hypothetical protein 6 3 10 22 At2g36570 "leucine-rich repeat transmembrane protein kinase, putative " 6 3 10 23 At2g36640 late embryogenesis abundant protein (ECP63) / LEA protein nearly identical to to LEA protein in group 3 [Arabidopsis thaliana] GI:1526424; contains Pfam profile PF02987: Late embryogenesis abundant protein 6 3 10 24 At2g39200 "seven transmembrane MLO family protein / MLO-like protein 12 (MLO12) identical to SP|O80961 MLO-like protein 12 (AtMlo12) {Arabidopsis thaliana}, membrane protein Mlo12 [Arabidopsis thaliana] gi|14091594|gb|AAK53805; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 6 3 10 25 At2g39260 MIF4G domain-containing protein similar to hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile PF02854: MIF4G domain 6 3 11 1 At2g39415 F-box family protein contains Pfam profile PF00646: F-box domain 6 3 11 2 At2g39470 photosystem II reaction center PsbP family protein 6 3 11 3 At2g39660 "protein kinase, putative similar to protein kinase gi|166809|gb|AAA18853" 6 3 11 4 At2g39710 aspartyl protease family protein contains profile Pfam PF00026: Eukaryotic aspartyl protease; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site.; 6 3 11 5 At2g39810 expressed protein 6 3 11 6 At2g39855 expressed protein 6 3 11 7 At2g42340 expressed protein 6 3 11 8 At2g42390 "protein kinase C substrate, heavy chain-related similar to Protein kinase C substrate, 80 kDa protein, heavy chain (PKCSH) (80K-H protein) (Swiss-Prot:P14314) [Homo sapiens]; contains 1 transmembrane domain;" 6 3 11 9 At2g42540 cold-responsive protein / cold-regulated protein (cor15a) identical to cold-regulated protein cor15a [Arabidopsis thaliana] GI:507149; contains Pfam profile PF02987: Late embryogenesis abundant protein 6 3 11 10 At2g42590 "14-3-3 protein GF14 mu (GRF9) identical to GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis thaliana]" 6 3 11 11 At2g42750 DNAJ heat shock N-terminal domain-containing protein low similarity to GFA2 [Arabidopsis thaliana] GI:21429604; contains Pfam profile PF00226: DnaJ domain 6 3 11 12 At2g42810 "serine/threonine protein phosphatase, putative similar to SP|P53042 Serine/threonine protein phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase T) (PPT) {Rattus norvegicus}; contains Pfam profiles PF00149: Ser/Thr protein phosphatase, PF00515: TPR Domain" 6 3 11 13 At2g42960 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 3 11 14 At2g43010 phytochrome-interacting factor 4 (PIF4) / basic helix-loop-helix protein 9 (bHLH9) / short under red-light 2 (SRL2) identical to SP|Q8W2F3 Phytochrome-interacting factor 4 (Basic helix-loop-helix protein 9) (bHLH9) (Short under red-light 2) {Arabidopsis thaliana}; supporting cDNA gi|18026965|gb|AF251694.1|AF251694 6 3 11 15 At2g45690 shrunken seed protein (SSE1) identical to shrunken seed protein [Arabidopsis thaliana] GI:4837733; annotation based on supporting cDNA gi|4837732|gb|AF085354.1|AF085354 6 3 11 16 At2g45740 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam profile PF05648: Peroxisomal biogenesis factor 11 (PEX11) 6 3 11 17 At2g45910 "protein kinase family protein / U-box domain-containing protein contains Pfam profiles PF00069 Eukaryotic protein kinase domain, PF04564: U-box domain; supported by tandem duplication of (GI:3386604) (TIGR_Ath1:At2g45920) [Arabidopsis thaliana]" 6 3 11 18 At2g45970 "cytochrome P450, putative " 6 3 11 19 At2g46130 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 6 3 11 20 At2g46180 intracellular protein transport protein USO1-related similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] 6 3 11 21 At2g46320 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 6 3 11 22 At2g46360 expressed protein 6 3 11 23 At3g01710 expressed protein 6 3 11 24 At3g01770 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 6 3 11 25 At3g01900 cytochrome P450 family protein similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450 6 3 12 1 At3g01950 expressed protein ; supporting cDNA gi|26453293|dbj|AK119150.1| 6 3 12 2 At3g02100 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 3 12 3 At3g02150 "TCP family transcription factor, putative similar to transcription factor PCF6 [Oryza sativa (japonica cultivar-group)] GI:20975255; contains Pfam profile PF03634: TCP family transcription factor" 6 3 12 4 At3g02280 "flavodoxin family protein low similarity to SP|Q05001 NADPH-cytochrome P450 reductase (EC 1.6.2.4) {Catharanthus roseus}, similar to NADPH-dependent FMN and FAD containing oxidoreductase [Homo sapiens] GI:6694369; contains Pfam profiles PF00258: flavodoxin, PF00667: FAD binding domain, PF00175: Oxidoreductase NAD-binding domain" 6 3 12 5 At3g02320 "N2,N2-dimethylguanosine tRNA methyltransferase family protein similar to N2,N2-dimethylguanosine tRNA methyltransferase [Homo sapiens] GI:11066198; contains Pfam profile PF02005: N2,N2-dimethylguanosine tRNA methyltransferase" 6 3 12 6 At3g04960 expressed protein low similarity to SP|P32380 NUF1 protein (Spindle poly body spacer protein SPC110) {Saccharomyces cerevisiae} 6 3 12 7 At3g05010 "transmembrane protein, putative similar to GB:AAB61079; contains weak similarity to the SAPB protein (TR:E236624) [Arabidopsis thaliana]; similar to seven transmembrane domain orphan receptor (GI:4321619) [Mus musculus] contains 7 transmembrane domains;" 6 3 12 8 At3g05165 "sugar transporter, putative similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 6 3 12 9 At3g05220 heavy-metal-associated domain-containing protein similar to farnesylated protein 1 (GI:23304411) {Hordeum vulgare subsp. spontaneum}; contains Pfam profile PF00403: Heavy-metal-associated domain 6 3 12 10 At3g05400 "sugar transporter, putative similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701, integral membrane protein GB:U43629 from [Beta vulgaris]; contains Pfam profile PF00083: major facilitator superfamily protein" 6 3 12 11 At3g05460 sporozoite surface protein-related contains weak similarity to Sporozoite surface protein 2 precursor (Swiss-Prot:Q01443) [Plasmodium berghei yoelii] 6 3 12 12 At3g05590 60S ribosomal protein L18 (RPL18B) similar to GB:P42791 6 3 12 13 At3g05640 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase-2C GB:AAC36699 from [Mesembryanthemum crystallinum]" 6 3 12 14 At3g08520 60S ribosomal protein L41 (RPL41D) 6 3 12 15 At3g08580 "ADP, ATP carrier protein 1, mitochondrial / ADP/ATP translocase 1 / adenine nucleotide translocator 1 (ANT1) identical to SWISS-PROT:P31167 ADP,ATP carrier protein 1 (Adenine nucleotide translocator 1) [Arabidopsis thaliana]" 6 3 12 16 At3g08750 F-box family protein contains F-box domain Pfam:PF00646 6 3 12 17 At3g08810 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 6 3 12 18 At3g08940 chlorophyll A-B binding protein (LHCB4.2) contains Pfam profile: PF00504 chlorophyll A-B binding protein; identical to Lhcb4.2 protein GB:AAD28774 [Arabidopsis thaliana] 6 3 12 19 At3g08990 "yippee family protein similar to qdgl-1 [Coturnix coturnix] GI:10441650, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 6 3 12 20 At3g09120 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 6 3 12 21 At3g09160 "RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 6 3 12 22 At3g11670 digalactosyldiacylglycerol synthase 1 (DGD1) / MGDG:MGDG galactosyltransferase / galactolipid galactosyltransferase identical to digalactosyldiacylglycerol synthase (DGD1) GI:5354158 [Arabidopsis thaliana] 6 3 12 23 At3g11720 expressed protein 6 3 12 24 At3g11870 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 6 3 12 25 At3g11910 "ubiquitin-specific protease, putative strong similarity to ubiquitin-specific protease 12 (UBP12) [Arabidopsis thaliana] GI:11993471; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF00917: MATH domain" 6 3 13 1 At3g12040 DNA-3-methyladenine glycosylase (MAG) identical to DNA-3-methlyadenine glycosylase (MAG) SP:Q39147 from [Arabidopsis thaliana]; contains Pfam profile: PF02245 methylpurine-DNA glycosylase (MPG) 6 3 13 2 At3g12070 "geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative similar to geranylgeranyl transferase type II beta subunit SP:P53611 [GI:1552549] [Homo sapiens]" 6 3 13 3 At3g12210 expressed protein 6 3 13 4 At3g12250 bZIP family transcription factor contains Pfam profile:PF00170 bZIP transcription factor 6 3 13 5 At3g14710 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 3 13 6 At3g14760 expressed protein 6 3 13 7 At3g14890 phosphoesterase identical to phosphoesterase [Arabidopsis thaliana] GI:21630064; contains Pfam profile PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 6 3 13 8 At3g14930 "uroporphyrinogen decarboxylase, putative / UPD, putative similar to uroporphyrinogen decarboxylase (chloroplast) from Nicotiana tabacum [SP|Q42967], Hordeum vulgare [SP|Q42855], Zea mays [SP|O81220]; contains Pfam domain uroporphyrinogen decarboxylase (URO-D) PF01208" 6 3 13 9 At3g15070 "zinc finger (C3HC4-type RING finger) family protein similar to C-terminal zinc-finger [Glycine max] GI:558543; contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 3 13 10 At3g15120 "AAA-type ATPase family protein contains PROSITE domains, PS00674: AAA-protein family signature and PS00017: ATP/GTP-binding site motif A (P-loop)" 6 3 13 11 At3g15290 "3-hydroxybutyryl-CoA dehydrogenase, putative similar to S(+)-beta-hydroxybutyryl CoA dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase) [Paracoccus denitrificans] GI:12003356; contains Pfam profiles PF02737: 3-hydroxyacyl-CoA dehydrogenase NAD binding, PF00725: 3-hydroxyacyl-CoA dehydrogenase C-terminal" 6 3 13 12 At3g15350 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 6 3 13 13 At3g17930 expressed protein 6 3 13 14 At3g18010 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana]; similar to HB2 homeodomain protein GB:CAA09367 from [Populus tremula x Populus tremuloides] 6 3 13 15 At3g18160 "peroxin-3 family protein contains Pfam domain, PF04882: Peroxin-3" 6 3 13 16 At3g18210 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 6 3 13 17 At3g18370 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain 6 3 13 18 At3g18410 "NADH-ubiquinone oxidoreductase-related similar to NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-12KD) (CI-12KD). (Swiss-Prot:Q03015) [Neurospora crassa]" 6 3 13 19 At3g18570 glycine-rich protein / oleosin contains similarity to Pfam profile: PF01277 Oleosin 6 3 13 20 At3g18630 uracil DNA glycosylase family protein contains Pfam profile: PF03167 uracil DNA glycosylase superfamily 6 3 13 21 At3g21310 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 6 3 13 22 At3g21370 "glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase (GI:757740) [Brassica napus]; similar to beta-glucosidase GB:AAB64244 from [Arabidopsis thaliana], (Plant Mol. Biol. 34 (1), 57-68 (1997))" 6 3 13 23 At3g21550 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 6 3 13 24 At3g21590 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 6 3 13 25 At3g21710 expressed protein 6 3 14 1 At3g21760 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 3 14 2 At3g21930 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] 6 3 14 3 At3g21990 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 6 3 14 4 At3g24700 F-box family protein contains F-box domain Pfam:PF00646 6 3 14 5 At3g24750 expressed protein 6 3 14 6 At3g25010 "disease resistance family protein contains leucine rich-repeat (LRR) domains (23 copies) Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 6 3 14 7 At3g25070 RPM1-interacting protein 4 (RIN4) identical to SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis thaliana} 6 3 14 8 At3g25220 "FK506-binding protein 2-1 (FKBP15-1) / immunophilin / peptidyl-prolyl cis-trans isomerase / rotamase identical to SP|Q38935 FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1) {Arabidopsis thaliana}, immunophilin (FKBP15-1) GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. 93 (14), 6964-6969 (1996))" 6 3 14 9 At3g25280 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 3 14 10 At3g25560 protein kinase family protein contains Prosite:PS00108: Serine/Threonine protein kinases active-site signature and PS00107: Protein kinases ATP-binding region signature 6 3 14 11 At3g25590 expressed protein 6 3 14 12 At3g28220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 6 3 14 13 At3g28280 hypothetical protein 6 3 14 14 At3g28460 expressed protein contains Pfam PF03602: Conserved hypothetical protein 95 6 3 14 15 At3g28520 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 6 3 14 16 At3g28700 "expressed protein contains Pfam PF02636: Uncharacterized ACR, COG1565" 6 3 14 17 At3g28750 expressed protein 6 3 14 18 At3g28920 "zinc finger homeobox family protein / ZF-HD homeobox family protein contains Pfam PF04770: ZF-HD protein dimerisation region; contains Pfam TIGR01566: ZF-HD homeobox protein Cys/His-rich domain; contains TIGRFAM TIGR01565: homeobox domain, ZF-HD class; similar to ZF-HD homeobox protein (GI:13277220) [Flaveria bidentis]" 6 3 14 19 At3g28958 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 6 3 14 20 At3g42760 "hypothetical protein similar to At3g43370, At2g14780, At1g34710, At1g27810, At1g25784, At4g08890" 6 3 14 21 At3g42810 hypothetical protein hypothetical proteins - Arabidopsis thaliana 6 3 14 22 At3g43140 "hypothetical protein predicted proteins, Arabidopsis thaliana" 6 3 14 23 At3g43190 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative strong similarity to SP|P49040 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS1)" 6 3 14 24 At3g43400 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 6 3 14 25 At3g43460 hypothetical protein 6 3 15 1 At3g43630 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 6 3 15 2 At3g43700 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 6 3 15 3 At3g46650 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 3 15 4 At3g46710 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 6 3 15 5 At3g46890 "expressed protein hypothetical protein F2I9.20 - Arabidopsis thaliana,PID:g3785987" 6 3 15 6 At3g46950 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 6 3 15 7 At3g47130 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; 6 3 15 8 At3g47190 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to ACC oxidase from Brassica oleracea [GI:559407], Cucumis melo [SP|Q04644], Lycopersicon esculentum [SP|P05116]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 6 3 15 9 At3g47340 asparagine synthetase 1 [glutamine-hydrolyzing] / glutamine-dependent asparagine synthetase 1 (ASN1) identical to SP|P49078 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine- dependent asparagine synthetase) {Arabidopsis thaliana} 6 3 15 10 At3g47380 invertase/pectin methylesterase inhibitor family protein low similarity to SP|Q42534 Pectinesterase 2 precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2) {Arabidopsis thaliana}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 6 3 15 11 At3g50200 expressed protein ; expression supported by MPSS 6 3 15 12 At3g50240 "kinesin motor protein-related KINESIN-LIKE PROTEIN KIF4, Homo sapiens, EMBL:AF179308" 6 3 15 13 At3g50410 Dof-type zinc finger domain-containing protein 6 3 15 14 At3g50470 hypersensitive response protein 3 (HR3) identical to HR3 [Arabidopsis thaliana GI:12958164; contains Pfam profile PF05659: Arabidopsis broad-spectrum mildew resistance protein RPW8 6 3 15 15 At3g50650 scarecrow-like transcription factor 7 (SCL7) 6 3 15 16 At3g50700 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 3 15 17 At3g50880 HhH-GPD base excision DNA repair family protein contains weak similarity to DNA-3-methyladenine glycosylase 1 (EC 3.2.2.21) (3-methyladenine DNA glycosidase 1) (3MEA DNA glycosylase 1) (Swiss-Prot:Q92383) [Schizosaccharomyces pombe]; contains Pfam profile PF00730: HhH-GPD superfamily base excision DNA repair protein 6 3 15 18 At3g50940 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 6 3 15 19 At3g53500 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 6 3 15 20 At3g53540 expressed protein 6 3 15 21 At3g53710 ARF GAP-like zinc finger-containing protein ZIGA2 (ZIGA2) nearly identical to ARF GAP-like zinc finger-containing protein ZIGA2 from GI:10441356 [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 6 3 15 22 At3g53750 actin 3 (ACT3) identical to SP|P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. 6 3 15 23 At3g53900 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|P50926 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Lactococcus lactis}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 6 3 15 24 At3g53950 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 6 3 15 25 At3g54070 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 6 3 16 1 At3g54130 josephin family protein contains Pfam domain PF02099: Josephin 6 3 16 2 At3g56900 aladin-related / adracalin-related weak similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo sapiens}; non-consensus AT-AC splice sites at intron 6 6 3 16 3 At3g56960 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 6 3 16 4 At3g57140 patatin-related contains Patatin domain PF01734 6 3 16 5 At3g57200 hypothetical protein 6 3 16 6 At3g57360 expressed protein 6 3 16 7 At3g57400 expressed protein 6 3 16 8 At3g57570 expressed protein 6 3 16 9 At3g57630 exostosin family protein contains Pfam profile: PF03016 exostosin family 6 3 16 10 At3g60390 homeobox-leucine zipper protein 3 (HAT3) / HD-ZIP protein 3 identical to Homeobox-leucine zipper protein HAT3 (SP:P46602) [Arabidopsis thaliana] 6 3 16 11 At3g60440 expressed protein 6 3 16 12 At3g60590 expressed protein 6 3 16 13 At3g60660 expressed protein 6 3 16 14 At3g60820 20S proteasome beta subunit F1 (PBF1) 6 3 16 15 At3g60880 "dihydrodipicolinate synthase 1 (DHDPS1) (DHDPS) (DHPS1) identical to SP|Q9LZX6 Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1) {Arabidopsis thaliana}" 6 3 16 16 At3g61060 F-box family protein / lectin-related low similarity to PP2 lectin polypeptide [Cucurbita maxima] GI:410437; contains Pfam profile PF00646: F-box domain 6 3 16 17 At3g61120 MADS-box protein (AGL13) 6 3 16 18 At4g00234 expressed protein 6 3 16 19 At4g00280 hypothetical protein 6 3 16 20 At4g00380 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 6 3 16 21 At4g00420 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 6 3 16 22 At4g00560 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] 6 3 16 23 At4g00585 expressed protein 6 3 16 24 At4g00730 anthocyaninless2 (ANL2) nearly identical to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094 6 3 16 25 At4g00755 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 3 17 1 At4g03250 homeobox-leucine zipper family protein similar to homeobox transcription factor Hox7 [Lycopersicon peruvianum] GI:19486; contains Pfam PF00046: Homeobox domain 6 3 17 2 At4g03290 "calcium-binding protein, putative similar to calcium-binding protein [Lotus japonicus] GI:18413495; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 6 3 17 3 At4g03430 pre-mRNA splicing factor-related similar to pre-mRNA splicing factor pre-mRNA splicing factor prp1 (SP:Q12381) [Fission yeast] 6 3 17 4 At4g03490 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 6 3 17 5 At4g03660 "hypothetical protein similar to A. thaliana hypothetical protein T6P5.8, GenBank accession number AC005970" 6 3 17 6 At4g03820 expressed protein 6 3 17 7 At4g04070 "hypothetical protein low similarity to protective antigen [Streptococcus pyogenes] GI:8996050, fibrinogen-binding protein [Streptococcus equi] GI:3093478" 6 3 17 8 At4g04180 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 6 3 17 9 At4g08860 hypothetical protein 6 3 17 10 At4g08895 inorganic phosphate transporter family protein similar to inorganic phosphate transporter (GI:3869190) [Arabidopsis thaliana] 6 3 17 11 At4g09090 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 6 3 17 12 At4g09150 T-complex protein 11 contains Pfam PF05794: T-complex protein 11 6 3 17 13 At4g09370 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 6 3 17 14 At4g09450 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 6 3 17 15 At4g09610 gibberellin-regulated protein 2 (GASA2) / gibberellin-responsive protein 2 identical to SP|P46688 Gibberellin-regulated protein 2 precursor {Arabidopsis thaliana} 6 3 17 16 At4g09670 "oxidoreductase family protein similar to AX110P [Daucus carota] GI:285739; contains Pfam profiles PF01408: Oxidoreductase family NAD-binding Rossmann fold, PF02894: Oxidoreductase family C-terminal alpha/beta domain" 6 3 17 17 At4g12430 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 6 3 17 18 At4g12470 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 6 3 17 19 At4g12650 "endomembrane protein 70, putative TM4 family;" 6 3 17 20 At4g12720 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 6 3 17 21 At4g12870 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 6 3 17 22 At4g12930 hypothetical protein 6 3 17 23 At4g13100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 3 17 24 At4g13160 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 6 3 17 25 At4g15510 photosystem II reaction center PsbP family protein contains PsbP domain PF01789; identical to SP:O23403 (Arabidopsis thaliana) 6 3 18 1 At4g15550 UDP-glucose:indole-3-acetate beta-D-glucosyltransferase (IAGLU) identical to UDP-glucose:indole-3-acetate beta-D-glucosyltransferase (iaglu) GI:2149126 from [Arabidopsis thaliana] 6 3 18 2 At4g15735 expressed protein 6 3 18 3 At4g15770 "60S ribosome subunit biogenesis protein, putative contains similarity to 60S ribosome subunit biogenesis protein NIP7 (Swiss-Prot:Q08962) [Saccharomyces cerevisiae]" 6 3 18 4 At4g15940 "fumarylacetoacetate hydrolase family protein contains Pfam domain, PF01557: fumarylacetoacetate hydrolase family protein" 6 3 18 5 At4g15980 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 6 3 18 6 At4g16141 expressed protein contains 1 predicted transmembrane domain; contains a partial Pfam PF00320: GATA zinc finger profile 6 3 18 7 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 6 3 18 8 At4g18640 "leucine-rich repeat transmembrane protein kinase, putative " 6 3 18 9 At4g18700 CBL-interacting protein kinase 12 (CIPK12) identical to CBL-interacting protein kinase 12 [Arabidopsis thaliana] gi|13249123|gb|AAK16687; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 12 (CIPK12) GI:13249122 6 3 18 10 At4g18860 expressed protein ; expression supported by MPSS 6 3 18 11 At4g18910 "aquaglyceroporin / NOD26-like major intrinsic protein 2 (NLM2) contains Pfam profile: MIP PF00230; similar to SP:P08995 {Glycine max} Nodulin-26 (N-26); identical to cDNA aquaglyceroporin (nlm2 gene) GI:11071655, aquaglyceroporin [Arabidopsis thaliana] GI:11071656" 6 3 18 12 At4g19040 "pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein contains Pfam profiles PF01852: START domain, PF00169: PH domain" 6 3 18 13 At4g19095 expressed protein 6 3 18 14 At4g19230 "cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_" 6 3 18 15 At4g19270 hypothetical protein 6 3 18 16 At4g22150 UBX domain-containing protein similar to XY40 protein [Rattus norvegicus] GI:2547025; contains Pfam profile PF00789: UBX domain 6 3 18 17 At4g22180 F-box family protein contains F-box domain Pfam:PF00646 6 3 18 18 At4g22280 F-box family protein contains Pfam profile PF00646: F-box domain 6 3 18 19 At4g22340 "phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative similar to CDP-diacylglycerol synthetase (CDS) GI:2181182 from [Arabidopsis thaliana]" 6 3 18 20 At4g22520 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 6 3 18 21 At4g22570 "adenine phosphoribosyltransferase, putative strong similarity to Adenine phosphoribosyltransferase [Hordeum vulgare subsp. vulgare] GI:9711921; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 6 3 18 22 At4g22740 glycine-rich protein 6 3 18 23 At4g22770 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 6 3 18 24 At4g25350 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 6 3 18 25 At4g25390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 3 19 1 At4g25540 DNA mismatch repair protein MSH3 (MSH3) identical to SP|O65607 DNA mismatch repair protein MSH3 (AtMsh3) {Arabidopsis thaliana} 6 3 19 2 At4g25600 ShTK domain-containing protein similar to PBCV-1 prolyl 4-hydroxylase [Paramecium bursaria Chlorella virus 1] GI:1131429; contains Pfam profile PF01549: ShTK domain 6 3 19 3 At4g25760 expressed protein 6 3 19 4 At4g25820 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR9) identical to xyloglucan endotransglycosylase GI:4218963 from [Arabidopsis thaliana] 6 3 19 5 At4g25990 expressed protein 6 3 19 6 At4g26030 hypothetical protein 6 3 19 7 At4g28530 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; No apical meristem gene (NAM), required for pattern formation in embryos and flowers-Petunia hybrida, PATCHX:E205713" 6 3 19 8 At4g28590 expressed protein 6 3 19 9 At4g28730 "glutaredoxin family protein contains glutaredoxin domain, Pfam:PF00462" 6 3 19 10 At4g28790 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 6 3 19 11 At4g28980 cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1) identical to Cdk-activating kinase 1At [Arabidopsis thaliana] gi|3218550|dbj|BAA28775 6 3 19 12 At4g29030 "glycine-rich protein glycine-rich protein - Onobrychis viciifolia,PID:g2565429" 6 3 19 13 At4g29190 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 3 19 14 At4g29230 "no apical meristem (NAM) family protein similar to NAM family proteins GP|12751304|, GP|6223650|, GP|9758909 - Arabidopsis thaliana,PIR2:T04621" 6 3 19 15 At4g31790 "diphthine synthase, putative (DPH5) similar to Diphthine synthase (Diphtamide biosynthesis methyltransferase) (DPH5) (SP:P32469) [Saccharomyces cerevisiae]; similar to CGI-30 protein (GI:4680699) [Homo sapiens]; similar to methyltransferase DPH5, Saccharomyces cerevisiae, PIR2:S30890; contains Pfam PF00590 : Tetrapyrrole (Corrin/Porphyrin) Methylases domain; contains TIGRFAMS TIGR00522 : diphthine synthase" 6 3 19 16 At4g31830 expressed protein 6 3 19 17 At4g31985 60S ribosomal protein L39 (RPL39C) 6 3 19 18 At4g32030 expressed protein 6 3 19 19 At4g32175 exonuclease-related similar to SP|Q9NQT5 Exosome complex exonuclease RRP40 (EC 3.1.13.-) (Ribosomal RNA processing protein 40) {Homo sapiens} 6 3 19 20 At4g32250 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 3 19 21 At4g32410 "cellulose synthase, catalytic subunit, putative similar to cellulose synthase-1 [gi:9622874] and -2 [gi:9622876] from Zea mays" 6 3 19 22 At4g32460 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 6 3 19 23 AT5G57480 PC-1 C07 6 3 19 24 3XSSC PC-1 C19 6 3 19 25 AT1G29930 PC-1 G07 6 3 20 1 3XSSC PC-1 G19 6 3 20 2 AT3G44150 PC-1 K07 6 3 20 3 3XSSC PC-1 K19 6 3 20 4 AT4G00810 PC-1 O07 6 3 20 5 3XSSC PC-1 O19 6 3 20 6 At4g35020 Rac-like GTP-binding protein (ARAC3) / Rho-like GTP-binding protein (ROP6) identical to SP|Q38912 RAC-like GTP binding protein ARAC3 (GTP-binding protein ROP6) {Arabidopsis thaliana}; identical to cDNA Rho-like GTP binding protein (Rop6) GI:2645642 6 3 20 7 At4g35080 "high-affinity nickel-transport family protein contains Pfam domain, PF03824: High-affinity nickel-transport protein" 6 3 20 8 At4g35220 cyclase family protein contains Pfam profile: PF04199 putative cyclase 6 3 20 9 At4g35280 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 3 20 10 At4g35410 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 6 3 20 11 At4g35460 thioredoxin reductase 1 / NADPH-dependent thioredoxin reductase 1 (NTR1) identical to SP|Q39243 6 3 20 12 At4g35620 cyclin 2b (CYC2b) identical to cyclin 2b protein [Arabidopsis thaliana] GI:509423 6 3 20 13 At4g35680 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 6 3 20 14 At4g38290 expressed protein 6 3 20 15 At4g38350 patched family protein similar to SP|O15118 Niemann-Pick C1 protein precursor from Homo sapiens (PID:g2276463); contains Pfam profile PF02460 Patched family 6 3 20 16 At4g38530 phosphoinositide-specific phospholipase C nearly identical to phosphoinositide-specific phospholipase C GI:557880 from [Arabidopsis thaliana]; contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 6 3 20 17 At4g38590 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:7939621 from [Lycopersicon esculentum]; contains Pfam profile PF01301 : Glycosyl hydrolases family 35 6 3 20 18 At4g38770 "proline-rich family protein (PRP4) similar to proline-rich protein [Arabidopsis thaliana] gi|6782442|gb|AAF28388; contains proline-rich extensin domains, INTERPRO:IPR002965" 6 3 20 19 At4g38820 expressed protein 6 3 20 20 At4g38960 "zinc finger (B-box type) family protein zinc finger protein - Oryza sativa, PID:d1034167" 6 3 20 21 At4g39000 "glycosyl hydrolase family 9 protein endo-1,4-beta-glucanase precursor - Fragariax ananassa, PID:g3549291" 6 3 20 22 At5g02450 "60S ribosomal protein L36 (RPL36C) 60S ribosomal protein L36, Arabidopsis thaliana, EMBL:AC004684" 6 3 20 23 At5g02490 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis thaliana} 6 3 20 24 At5g02620 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 6 3 20 25 At5g02680 expressed protein 6 3 21 1 At5g02840 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 6 3 21 2 At5g02880 "HECT-domain-containing protein / ubiquitin-transferase family protein / armadillo/beta-catenin-like repeat-containing protein similar to SP|Q14669 Thyroid receptor interacting protein 12 (TRIP12) {Homo sapiens}; contains Pfam profiles PF00632: HECT-domain (ubiquitin-transferase), PF00514: Armadillo/beta-catenin-like repeat" 6 3 21 3 At5g03060 expressed protein ; expression supported by MPSS 6 3 21 4 At5g03120 expressed protein 6 3 21 5 At5g05780 "26S proteasome non-ATPase regulatory subunit 7, putative / 26S proteasome regulatory subunit S12, putative / MOV34 protein, putative contains similarity to 26s proteasome regulatory subunit s12 (proteasome subunit p40) (mov34 protein) SP:P26516 from [Mus musculus]; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 6 3 21 6 At5g05840 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620); expression supported by MPSS 6 3 21 7 At5g05987 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 6 3 21 8 At5g06040 self-incompatibility protein-related 6 3 21 9 At5g06180 expressed protein similar to unknown protein (sp|Q9ZE28) 6 3 21 10 At5g06230 expressed protein contains Pfam profile PF03005: Arabidopsis proteins of unknown function 6 3 21 11 At5g06380 expressed protein ; expression supported by MPSS 6 3 21 12 At5g06440 expressed protein similar to unknown protein (gb|AAF23188.1) 6 3 21 13 At5g09520 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 3 21 14 At5g09580 expressed protein ; expression supported by MPSS 6 3 21 15 At5g09750 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 3 21 16 At5g09810 actin 7 (ACT7) / actin 2 identical to SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} 6 3 21 17 At5g09970 cytochrome P450 family protein 6 3 21 18 At5g10000 "ferredoxin family protein similar to Ferredoxin, chloroplast precursor from Arabidopsis thaliana [SP|P16972]; contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domains" 6 3 21 19 At5g10160 "beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase from Toxoplasma gondii [GI:3850997]; contains Pfam profile PF01377 Thioester dehydratase" 6 3 21 20 At5g10220 annexin 6 (ANN6) nearly identical to calcium-binding protein annexin 6 [Arabidopsis thaliana] GI:12667518 6 3 21 21 At5g13340 expressed protein 6 3 21 22 At5g13400 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 3 21 23 At5g13540 "expressed protein HERC2 - Homo sapiens, EMBL:AF071172; isoform contains non-consensus GG acceptor splice site at intron 6" 6 3 21 24 At5g13600 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000; contains BTB/POZ domain, Pfam:PF00651" 6 3 21 25 At5g13760 expressed protein similar to unknown protein (gb AAF63775.1) 6 3 22 1 At5g13820 telomeric DNA-binding protein 1 (TBP1) identical to telomeric DNA-binding protein 1 [Arabidopsis thaliana] gi|13641340|gb|AAK31590 6 3 22 2 At5g13980 glycosyl hydrolase family 38 protein similar to alpha-mannosidase GI:1419374 from [Homo sapiens] 6 3 22 3 At5g14040 mitochondrial phosphate transporter identical to mitochondrial phosphate transporter GI:3318617 from [Arabidopsis thaliana] 6 3 22 4 At5g16780 "SART-1 family protein contains Pfam domain, PF03343: SART-1 family" 6 3 22 5 At5g16820 heat shock factor protein 3 (HSF3) / heat shock transcription factor 3 (HSTF3) identical to heat shock transcription factor 3 (HSF3) SP:O81821 from [Arabidopsis thaliana] 6 3 22 6 At5g16990 "NADP-dependent oxidoreductase, putative strong similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 6 3 22 7 At5g17040 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP glucose:flavonoid 3-o-glucosyltransferase GI:13620861 from [Vitis vinifera]; contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 3 22 8 At5g17210 expressed protein 6 3 22 9 At5g17260 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 6 3 22 10 At5g17430 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 6 3 22 11 At5g17470 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 6 3 22 12 At5g20040 tRNA isopentenyltransferase 9 / IPP transferase 9 (IPT9) identical to tRNA isopentenyltransferase (IPT9) [Arabidopsis thaliana] GI:14279070 6 3 22 13 At5g20090 "expressed protein contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041)" 6 3 22 14 At5g20240 floral homeotic protein PISTILLATA (PI) contains Pfam profiles PF01486: K-box region and PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 6 3 22 15 At5g20300 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 6 3 22 16 At5g20480 "leucine-rich repeat transmembrane protein kinase, putative protein kinase Xa21, Oryza sativa, PIR:A57676" 6 3 22 17 At5g20550 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to leucoanthocyanidin dioxygenase [Malus domestica][SP|P51091], flavonol synthase [Petunia x hybrida][GI:311658]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 6 3 22 18 At5g20700 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 6 3 22 19 At5g20730 auxin-responsive factor (ARF7) identical to auxin response factor 7 GI:4104929 from [Arabidopsis thaliana] 6 3 22 20 At5g24060 expressed protein strong similarity to unknown protein (emb|CAB61996.1); expression supported by MPSS 6 3 22 21 At5g24110 WRKY family transcription factor 6 3 22 22 At5g24270 "calcineurin B-like protein, putative / calcium sensor homolog (SOS3) identical to calcium sensor homolog [Arabidopsis thaliana] GI:3309575; similar to calcineurin B-like protein 8 (GI:15866276) [Arabidopsis thaliana]" 6 3 22 23 At5g24310 expressed protein strong similarity to unknown protein (emb|CAB66408.1) 6 3 22 24 At5g24430 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] gi|16904222|gb|AAL30818" 6 3 22 25 At5g24490 "30S ribosomal protein, putative similar to SP|P19954 Plastid-specific 30S ribosomal protein 1, chloroplast precursor (CS-S5) (CS5) (S22) (Ribosomal protein 1) (PSRP-1) {Spinacia oleracea}; contains Pfam profile PF02482: Sigma 54 modulation protein / S30EA ribosomal protein" 6 3 23 1 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 6 3 23 2 At5g24710 "WD-40 repeat family protein contains 3 Pfam PF00400: WD domain, G-beta repeats;" 6 3 23 3 At5g27640 eukaryotic translation initiation factor 3 subunit 9 / eIF-3 eta / eIF3b (TIF3B1) nearly identical to SP|Q9C5Z1 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) {Arabidopsis thaliana} 6 3 23 4 At5g27700 "40S ribosomal protein S21 (RPS21C) ribosomal protein S21, Zea mays, PIR:T03945" 6 3 23 5 At5g27860 expressed protein 6 3 23 6 At5g27930 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase-2C, Mesembryanthemum crystallinum, EMBL:AF075581" 6 3 23 7 At5g28090 hypothetical protein 6 3 23 8 At5g28160 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 3 23 9 At5g28350 expressed protein 6 3 23 10 At5g28410 "hypothetical protein DYNAMIN-LIKE PROTEIN- Arabidopsis thaliana, EMBL:L36939" 6 3 23 11 At5g36680 hypothetical protein similar to unknown protein (emb CAB87684.1) contains Pfam profile PF03080: Arabidopsis proteins of unknown function 6 3 23 12 At5g36734 hypothetical protein 6 3 23 13 At5g36930 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 3 23 14 At5g37000 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 6 3 23 15 At5g37170 O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase [Populus tremuloides][SP|Q00763] 6 3 23 16 At5g37220 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 6 3 23 17 At5g37385 hypothetical protein 6 3 23 18 At5g37430 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 6 3 23 19 At5g40320 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 3 23 20 At5g40380 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 6 3 23 21 At5g40540 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 6 3 23 22 At5g40580 "20S proteasome beta subunit B (PBB2) (PRCFC) identical to 20S proteasome beta subunit PBB2 [Arabidopsis thaliana] GI:3421104, cDNA proteasome subunit prcfc GI:2511575" 6 3 23 23 At5g40740 expressed protein 6 3 23 24 At5g40800 hypothetical protein 6 3 23 25 At5g40970 expressed protein 6 3 24 1 At5g41030 "TCP family transcription factor, putative similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440) Oryza sativa] ; similar to unknown protein (emb|CAB61988.1)" 6 3 24 2 At5g43710 "glycoside hydrolase family 47 protein similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [Mus musculus][SP|P39098]" 6 3 24 3 At5g43760 "beta-ketoacyl-CoA synthase, putative similar to beta-ketoacyl-CoA synthase [Simmondsia chinensis][GI:1045614]" 6 3 24 4 At5g43935 "flavonol synthase, putative similar to flavonol synthase from Arabidopsis thaliana [SP|Q96330], Matthiola incana [SP|O04395]; contains Pfam profile PF03171 2OG-Fe(II) oxygenase superfamily" 6 3 24 5 At5g43970 expressed protein 6 3 24 6 At5g44130 "fasciclin-like arabinogalactan-protein, putative similar to gi_13377784_gb_AAK20861" 6 3 24 7 At5g44190 myb family transcription factor (GLK2) contains Pfam profile: PF00249 myb-like DNA-binding domain 6 3 24 8 At5g44330 male sterility MS5 family protein similar to male sterility MS5 [Arabidopsis thaliana] GI:3859112; contains Pfam profile PF00515 TPR Domain 6 3 24 9 At5g44380 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 6 3 24 10 At5g46915 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 6 3 24 11 At5g46970 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 6 3 24 12 At5g47130 Bax inhibitor-1 family / BI-1 family similar to SP|Q9LD45 Bax inhibitor-1 (BI-1) (AtBI-1) {Arabidopsis thaliana} 6 3 24 13 At5g47180 "vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia], to VAMP-associated protein B GI:4240464 [Rattus norvegicus] and to Vesicle-associated membrane protein/synaptobrevin binding protein (VAP-33) (SP:Q16943)[Aplysia californica]" 6 3 24 14 At5g47350 palmitoyl protein thioesterase family protein 6 3 24 15 At5g47410 hypothetical protein 6 3 24 16 At5g47510 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus], SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis] and to SEC14 cytosolic factor (SP:P53989) [Candida glabrata]" 6 3 24 17 At5g47570 expressed protein 6 3 24 18 At5g50200 expressed protein similar to unknown protein (pir||T05562) isoform contains a non-consensus AT acceptor splice site at intron 1 6 3 24 19 At5g50260 "cysteine proteinase, putative similar to cysteine endopeptidase precursor CysEP GI:2944446 from [Ricinus communis]" 6 3 24 20 At5g50420 expressed protein strong similarity to unknown protein (gb|AAD50008.1) 6 3 24 21 At5g50480 "CCAAT-box binding transcription factor Hap5a, putative GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina} similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 6 3 24 22 At5g50660 expressed protein 6 3 24 23 At5g50740 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID: 9701579]; similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 6 3 24 24 At5g50900 "armadillo/beta-catenin repeat family protein armadillo/beta-catenin-like repeats, Pfam:PF00514" 6 3 24 25 At5g50950 "fumarate hydratase, putative / fumarase, putative similar to SP|P55250 Fumarate hydratase, mitochondrial precursor (EC 4.2.1.2) (Fumarase) {Rhizopus oryzae}; contains Pfam profile PF00206: Lyase" 6 3 25 1 At5g53700 hypothetical protein 6 3 25 2 At5g53760 "seven transmembrane MLO family protein / MLO-like protein 11 (MLO11) identical to membrane protein Mlo11 [Arabidopsis thaliana] gi|14091592|gb|AAK53804; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 6 3 25 3 At5g53900 expressed protein similar to unknown protein (gb|AAF34833.1) 6 3 25 4 At5g53950 no apical meristem (NAM) family protein identical to no apical meristem protein CUC2 (GI:1944132) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) domain; 6 3 25 5 At5g54095 expressed protein 6 3 25 6 At5g54145 expressed protein 6 3 25 7 At5g54320 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 6 3 25 8 At5g54380 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 3 25 9 At5g57070 "hydroxyproline-rich glycoprotein family protein Common family members: At5g26070, At5g19800, At1g72790 [Arabidopsis thaliana]" 6 3 25 10 At5g57123 expressed protein 6 3 25 11 At5g57260 cytochrome P450 71B10 identical to cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana] 6 3 25 12 At5g57320 "villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain" 6 3 25 13 At5g57460 expressed protein 6 3 25 14 At5g57530 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase XTR9 GI:4218963 from [Arabidopsis thaliana]" 6 3 25 15 At5g57660 "zinc finger (B-box type) family protein contains Pfam domain, PF00643: B-box zinc finger" 6 3 25 16 At5g57710 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 6 3 25 17 At5g60270 "lectin protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain, PF00139: Legume lectins beta domain, and PF00138: Legume lectins alpha domain" 6 3 25 18 At5g60330 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 6 3 25 19 At5g60470 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 3 25 20 At5g60530 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 6 3 25 21 At5g60660 major intrinsic family protein / MIP family protein similar to mipC protein GI:1657948 from [Mesembryanthemum crystallinum] 6 3 25 22 At5g60720 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 6 3 25 23 At5g60880 expressed protein ; expression supported by MPSS 6 3 25 24 At5g60940 "transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to cleavage stimulation factor 50K chain Homo sapiens, PIR:A45142" 6 3 25 25 At5g63630 "DEAD box RNA helicase, putative strong similarity to RNA helicase RH25 [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain; identical to cDNA DEAD box RNA helicase, RH31 GI:3776030" 6 3 26 1 At5g63690 hypothetical protein 6 3 26 2 At5g63870 serine/threonine protein phosphatase (PP7) identical to PP7 [Arabidopsis thaliana] GI:2791900 6 3 26 3 At5g63910 expressed protein 6 3 26 4 At5g64070 phosphatidylinositol 4-kinase (PI4K) nearly identical to gi:4467359 6 3 26 5 At5g64120 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|1483222|emb|CAA67551" 6 3 26 6 At5g64260 "phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region" 6 3 26 7 At5g64320 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 3 26 8 At5g66720 5-azacytidine resistance protein -related contains weak similarity to 5-azacytidine resistance protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces pombe] 6 3 26 9 At5g66780 expressed protein 6 3 26 10 At5g66930 expressed protein similar to unknown protein (pir||T38383) 6 3 26 11 At5g66985 expressed protein 6 3 26 12 At5g67150 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 6 3 26 13 At5g67190 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.1 (GI:21555563) {Arabidopsis thaliana}" 6 3 26 14 At5g67360 cucumisin-like serine protease (ARA12) Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from [Arabidopsis thaliana] 6 3 26 15 At5g67410 hypothetical protein 6 3 26 16 At3g42760 "hypothetical protein similar to At3g43370, At2g14780, At1g34710, At1g27810, At1g25784, At4g08890" 6 3 26 17 At3g42810 hypothetical protein hypothetical proteins - Arabidopsis thaliana 6 3 26 18 At3g43140 "hypothetical protein predicted proteins, Arabidopsis thaliana" 6 3 26 19 At3g43190 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative strong similarity to SP|P49040 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS1)" 6 3 26 20 At3g43400 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 6 3 26 21 At3g43460 hypothetical protein 6 3 26 22 At3g43630 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 6 3 26 23 At3g43700 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 6 3 26 24 Blank Blank 6 3 26 25 Blank Blank 6 4 1 1 atc03 Randomly generated negative control 6 4 1 2 atc09 Randomly generated negative control 6 4 1 3 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 6 4 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 6 4 1 5 Alien5 Control: Stratagene Spotreport Alien Oligo 6 4 1 6 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 6 4 1 7 atc07 Randomly generated negative control 6 4 1 8 Alien1 Control: Stratagene Spotreport Alien Oligo 6 4 1 9 At1g03600 "photosystem II family protein similar to SP:P74367 {Synechocystis sp.}; similar to ESTs emb|Z27038, gb|AA451546, emb|Z29876, gb|T45359 and gb|R90316" 6 4 1 10 At1g03670 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 6 4 1 11 At1g03810 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 6 4 1 12 At1g03850 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 6 4 1 13 At1g03990 "alcohol oxidase-related low similarity to long chain fatty alcohol oxidase from Candida cloacae [GI:6983581], Candida tropicalis [GI:6983594]; Location of EST 248L9T7, gb|AA713296" 6 4 1 14 At1g04040 "acid phosphatase class B family protein similar to SP|P15490 STEM 28 kDa glycoprotein precursor (Vegetative storage protein A) {Glycine max}, acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase; supporting cDNA gi|13926197|gb|AF370572.1|AF370572" 6 4 1 15 At1g04210 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 6 4 1 16 At1g04270 "40S ribosomal protein S15 (RPS15A) Strong similarity to Oryza 40S ribosomal protein S15. ESTs gb|R29788,gb|ATTS0365 come from this gene" 6 4 1 17 At1g06925 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 6 4 1 18 At1g06970 "cation/hydrogen exchanger, putative (CHX14) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 6 4 1 19 At1g07140 Ran-binding protein 1a (RanBP1a) identical to Ran-binding protein (atranbp1a) GI:2058282 from [Arabidopsis thaliana] 6 4 1 20 At1g07200 "ATP-dependent Clp protease ClpB protein-related similar to ATP-dependent Clp protease, ATP-binding subunit ClpB (GI:24982014) [Pseudomonas putida KT2440]; similar to ClpB protein (SP:Q9RA63){Thermus thermophilus}" 6 4 1 21 At1g07350 "transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269 (1997))" 6 4 1 22 At1g07400 17.8 kDa class I heat shock protein (HSP17.8-CI) similar to 17.5 kDa class I heat shock protein SP:P04793 from [Glycine max]; contains Pfam PF00011: Hsp20/alpha crystallin family 6 4 1 23 At1g07520 "scarecrow transcription factor family protein similar to GB:AAD24412 from [Arabidopsis thaliana] (Plant J. 18 (1), 111-119 (1999)); contains Pfam profile: PF03514 GRAS family transcription factor" 6 4 1 24 At1g07570 protein kinase (APK1a) identical to Protein kinase APK1A from [Arabidopsis thaliana] SWISS-PROT:Q06548 6 4 1 25 At1g10060 "branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1) nearly identical to SP|Q93Y32 Branched-chain amino acid aminotransferase 1, mitochondrial precursor (EC 2.6.1.42) (Atbcat-1) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 6 4 2 1 At1g10100 hypothetical protein 6 4 2 2 At1g10290 "dynamin-like protein 6 (ADL6) identical to dynamin-like protein 6 (ADL6) [Arabidopsis thaliana] GI:6651399; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain, PF00169: PH domain" 6 4 2 3 At1g10340 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 6 4 2 4 At1g10500 hesB-like domain-containing protein similar to IscA (putative iron-sulfur cluster assembly protein) [Azotobacter vinelandii] GI:2271523; contains Pfam profile PF01521: HesB-like domain 6 4 2 5 At1g10550 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endoxyloglucan transferase related protein EXGT-A3 GI:2154609 from [Arabidopsis thaliana]" 6 4 2 6 At1g10660 expressed protein 6 4 2 7 At1g10700 ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3) nearly identical to phosphoribosyl diphosphate synthase GI:4902470 from [Arabidopsis thaliana] 6 4 2 8 At1g13400 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 4 2 9 At1g13460 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 6 4 2 10 At1g13630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 6 4 2 11 At1g13690 RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif 6 4 2 12 At1g13900 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 6 4 2 13 At1g13960 WRKY family transcription factor similar to WKRY DNA-binding protein GB:AAD17441 6 4 2 14 At1g14150 oxygen evolving enhancer 3 (PsbQ) family protein extrinsic pII protein; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ) 6 4 2 15 At1g14185 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 6 4 2 16 At1g16800 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 6 4 2 17 At1g16840 expressed protein 6 4 2 18 At1g16970 "Ku70-like protein identical to Ku70-like protein GI:12006424 from [Arabidopsis thaliana]; contains Pfam profiles PF03731: Ku70/Ku80 N-terminal alpha/beta domain, PF02735: Ku70/Ku80 beta-barrel domain, PF03730: Ku70/Ku80 C-terminal arm, and PF02037: SAP domain; contains TIGRfam profile TIGR00578: ATP-dependent DNA helicase ii, 70 kDa subunit" 6 4 2 19 At1g17040 transcription factor-related contains Pfam profile: PF00017 Src homology domain 2; similar to transcription factor [Danio rerio] (GI:3687402) 6 4 2 20 At1g17210 expressed protein distantly related to dentin phosphoryn [Homo sapiens] (GI:4322670) 6 4 2 21 At1g17270 expressed protein 6 4 2 22 At1g17440 transcription initiation factor IID (TFIID) subunit A family protein similar to SP|Q16514 Transcription initiation factor TFIID 20/15 kDa subunits (TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam profile PF03847: Transcription initiation factor TFIID subunit A 6 4 2 23 At1g17490 expressed protein 6 4 2 24 At1g20400 myosin heavy chain-related 6 4 2 25 At1g20450 dehydrin (ERD10) identical to dehydrin ERD10 (Low-temperature-induced protein LTI45) [Arabidopsis thaliana] SWISS-PROT:P42759 6 4 3 1 At1g20600 DNA-binding protein-related low similarity to RAV2 [Arabidopsis thaliana] GI:3868859 6 4 3 2 At1g20640 RWP-RK domain-containing protein similar to nodule inception protein GI:6448579 from (Lotus japonicus); contains Pfam profile: PF02042 RWP-RK domain 6 4 3 3 At1g20800 F-box family protein contains Pfam:PF00646 F-box domain 6 4 3 4 At1g20850 "cysteine endopeptidase, papain-type (XCP2) identical to papain-type cysteine endopeptidase XCP2 GI:6708183 from [Arabidopsis thaliana]" 6 4 3 5 At1g21020 "hypothetical protein similar to At3g26530, At1g08760, At1g08740, At2g29240, At1g35650" 6 4 3 6 At1g21080 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein [Saccharomyces cerevisiae]; contains Pfam profile PF00226 DnaJ domain; 6 4 3 7 At1g23750 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 6 4 3 8 At1g23810 paired amphipathic helix repeat-containing protein low similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 6 4 3 9 At1g23940 adaptin family protein low similarity to SP|Q99128 Gamma-adaptin (Golgi adaptor HA1/AP1 adaptin gamma subunit) (Clathrin assembly protein complex 1 gamma large chain) {Ustilago maydis}; contains Pfam profile: PF01602 Adaptin N terminal region 6 4 3 10 At1g23980 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 6 4 3 11 At1g24150 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 6 4 3 12 At1g24210 paired amphipathic helix repeat-containing protein similar to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 6 4 3 13 At1g24340 monooxygenase family protein similar to polyketide hydroxylases from several bacterial species; contains Pfam:PF01360 [Monooxygenase] 6 4 3 14 At1g24400 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 6 4 3 15 At1g28100 expressed protein 6 4 3 16 At1g28135 expressed protein 6 4 3 17 At1g28300 transcriptional factor B3 family protein / leafy cotyledon 2 (LEC2) nearly identical to LEAFY COTYLEDON 2 [Arabidopsis thaliana] GI:15987516; contains Pfam profile PF02362: B3 DNA binding domain 6 4 3 18 At1g28330 "dormancy-associated protein, putative (DRM1) identical to dormancy-associated protein [Arabidopsis thaliana] GI:2995990; similar to dormancy-associated protein GI:2605887 from [Pisum sativum]; contains Pfam profile PF05564: Dormancy/auxin associated protein" 6 4 3 19 At1g28450 MADS-box family protein similar to MADS-box protein GI:2160701 from [Pinus radiata] 6 4 3 20 At1g28510 expressed protein 6 4 3 21 At1g28640 "GDSL-motif lipase, putative strong similarity to lipase GB:AAA93262 GI:1145627 [Arabidopsis thaliana]" 6 4 3 22 At1g28690 pentatricopeptide (PPR) repeat-containing protein contains six TIGRFAM TIGR00756: pentatricopeptide repeat domains; contains five Pfam PF01535: PPR repeats 6 4 3 23 At1g31835 expressed protein 6 4 3 24 At1g31885 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 6 4 3 25 At1g32090 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 6 4 4 1 At1g32160 expressed protein 6 4 4 2 At1g32320 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK10) mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 6 4 4 3 At1g32370 tobamovirus multiplication protein 2B (TOM2B) identical to tobamovirus multiplication 2B [Arabidopsis thaliana] gi|32698522|dbj|BAC24020; PMID: 12514139 6 4 4 4 At1g32480 "isocitrate/isopropylmalate dehydrogenase family protein similar to NAD+ dependent isocitrate dehydrogenase subunit 2 [Arabidopsis thaliana] GI:1766048; contains Pfam profile PF00180 dehydrogenase, isocitrate/isopropylmalate family" 6 4 4 5 At1g32540 "zinc finger protein, putative similar to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660" 6 4 4 6 At1g36180 acetyl-CoA carboxylase 2 (ACC2) nearly identical to acetyl-CoA carboxylase 2 (ACC2) [Arabidopsis thaliana] GI:11869928 6 4 4 7 At1g36340 "ubiquitin-conjugating enzyme family protein similar to Ubiquitin-conjugating enzyme E2-16 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) from {Schizosaccharomyces pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 6 4 4 8 At1g36925 hypothetical protein 6 4 4 9 At1g36990 expressed protein contains PS00070: Aldehyde dehydrogenases cysteine active site; similar to high molecular mass nuclear antigen (GI:2754696) [Gallus gallus];similar to streptococcal hemagglutinin (GI:8885520) [Streptococcus gordonii] similar to proteophosphoglycan (GI:5420389) [Leishmania major] 6 4 4 10 At1g38790 hypothetical protein 6 4 4 11 At1g40115 hypothetical protein 6 4 4 12 At1g42080 hypothetical protein contains similarity to cytochrome P450 (rapN) GI:987088 from [Streptomyces hygroscopicus] 6 4 4 13 At1g42430 expressed protein 6 4 4 14 At1g48325 Expressed protein 6 4 4 15 At1g48390 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g44180, At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis thaliana]" 6 4 4 16 At1g48560 expressed protein 6 4 4 17 At1g48605 halotolerance protein (HAL3B) contains Pfam PF02441: Flavoprotein; identical to Halotolerance protein Hal3b (SP:P94063)[Arabidopsis thaliana] 6 4 4 18 At1g48760 "delta-adaptin, putative similar to SP|O14617 Adapter-related protein complex 3 delta 1 subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam profile: PF01602 Adaptin N terminal region" 6 4 4 19 At1g48830 40S ribosomal protein S7 (RPS7A) similar to 40S ribosomal protein S7 homolog GI:5532505 from [Brassica oleracea] 6 4 4 20 At1g49005 "CLE11, putative CLAVATA3/ESR-Related 11 (CLE11)" 6 4 4 21 At1g49040 "stomatal cytokinesis defective / SCD1 protein (SCD1) contains Pfam PF02141: DENN (AEX-3) domain; contains Pfam PF00400: WD domain, G-beta repeat (8 copies); identical to stomatal cytokinesis defective [Arabidopsis thaliana] GI:19743728; supporting cDNA gi|19743727|gb|AY082605.1|; PMID 12874123" 6 4 4 22 At1g52040 jacalin lectin family protein nearly identical to myrosinase-binding protein homolog GI:2997767 from [Arabidopsis thaliana]; contains Pfam profile PF01419 jacalin-like lectin domain; identical to cDNA myrosinase-binding protein homolog GI:2997766 6 4 4 23 At1g52090 hypothetical protein 6 4 4 24 At1g52270 expressed protein 6 4 4 25 At1g52320 expressed protein contains Pfam profile: PF04782 protein of unknown function (DUF632) 6 4 5 1 At1g52460 hypothetical protein 6 4 5 2 At1g52500 "formamidopyrimidine-DNA glycolase family protein / mutM, putative (MMH-1) identical to mutM homologue-2 [Arabidopsis thaliana] GP:3550983 PMID:9819050; contains Pfam profile PF01149: Formamidopyrimidine-DNA glycosylase" 6 4 5 3 At1g52670 biotin/lipoyl attachment domain-containing protein similar to SP|Q06881 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.}; contains Pfam profile PF00364: Biotin-requiring enzyme 6 4 5 4 At1g52720 expressed protein 6 4 5 5 At1g55370 expressed protein 6 4 5 6 At1g55420 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 4 5 7 At1g55550 kinesin motor protein-related Similar to Kinesin proteins; Contains kinesin motor domain protein motif and kinesin heavy chain signature motif 6 4 5 8 At1g55610 protein kinase family protein contains Prosite:PS00107: Protein kinases ATP-binding region signature 6 4 5 9 At1g55770 "invertase/pectin methylesterase inhibitor family protein low similarity to SP|Q43111 Pectinesterase 3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) {Phaseolus vulgaris}, SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 6 4 5 10 At1g55820 hydroxyproline-rich glycoprotein family protein 6 4 5 11 At1g55970 "histone acetyltransferase 4 (HAC4) similar to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo sapiens]; contains Pfam PF02135: TAZ zinc finger profile; contains Pfam PF00569: Zinc finger, ZZ type domain; identical to histone acetyltransferase HAC4 (GI:14794966) {Arabidopsis thaliana}" 6 4 5 12 At1g56010 transcription activator NAC1 (NAC1) contains Pfam PF02365: No apical meristem (NAM) domain; identical to NAC1 GB:AAF21437 GI:6649236 from [Arabidopsis thaliana] 6 4 5 13 At1g60700 forkhead-associated domain-containing protein / FHA domain-containing protein contains similarity to nucleolar protein GI:2384719 from [Mus musculus] 6 4 5 14 At1g60760 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 6 4 5 15 At1g60940 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK1 from [Arabidopsis thaliana], SWISS-PROT:P43291" 6 4 5 16 At1g60985 expressed protein 6 4 5 17 At1g61110 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM protein GI:1279639 from [Petunia hybrida] 6 4 5 18 At1g61170 expressed protein 6 4 5 19 At1g61350 "armadillo/beta-catenin repeat family protein armadillo/beta-catenin-like repeats, Pfam:PF00514" 6 4 5 20 At1g61410 tolA protein-related contains weak similarity to Swiss-Prot:P19934 TolA protein [Escherichia coli] 6 4 5 21 At1g64160 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein GB:AAF25365 GI:6694709 from [Thuja plicata]; similar to pathogenesis-related protein [Pisum sativum] gi:4585273 gb:AAD25355 6 4 5 22 At1g64210 "leucine-rich repeat transmembrane protein kinase, putative contains 1 predicted transmembrane domain; similar to receptor-like protein kinase (GI:4008006) [Arabidopsis thaliana]; similar to receptor-like kinase RHG1 (GI:21239382) [Glycine max]; similar to receptor-like protein kinase 3 (GI:13506810) [Lycopersicon esculentum]" 6 4 5 23 At1g64380 "AP2 domain-containing transcription factor, putative contains Pfam profile: PF00847 AP2 domain" 6 4 5 24 At1g64430 expressed protein 6 4 5 25 At1g64610 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 6 4 6 1 At1g64660 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme family protein similar to SP|P13254 Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase) {Pseudomonas putida}; contains Pfam profile PF01053: Cys/Met metabolism PLP-dependent enzyme 6 4 6 2 At1g64830 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 6 4 6 3 At1g64890 integral membrane transporter family protein contains 11 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter 6 4 6 4 At1g67690 "peptidase M3 family protein / thimet oligopeptidase family protein similar to SP|P42676 Neurolysin, mitochondrial precursor (EC 3.4.24.16) (Mitochondrial oligopeptidase M) {Rattus norvegicus}; contains Pfam profile PF01432: Peptidase family M3" 6 4 6 5 At1g67730 "b-keto acyl reductase, putative (GLOSSY8) similar to b-keto acyl reductase GI:2586127 from [Hordeum vulgare]" 6 4 6 6 At1g67855 hypothetical protein hypothetical protein 6 4 6 7 At1g67900 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 6 4 6 8 At1g68030 PHD finger protein-related contains low similarity to PHD-finger domain proteins 6 4 6 9 At1g68090 annexin 5 (ANN5) identical to calcium-binding protein annexin 5 [Arabidopsis thaliana] GI:12667520 6 4 6 10 At1g68260 thioesterase family protein contains Pfam profile: PF03061: thioesterase family protein 6 4 6 11 At1g68320 myb family transcription factor (MYB62) similar to myb-related transcription factor (cpm7) GI:1002799 from [Craterostigma plantagineum]; contains PFAM profile: myb DNA binding domain PF00249 6 4 6 12 At1g70980 "asparaginyl-tRNA synthetase, cytoplasmic, putative / asparagine-tRNA ligase, putative similar to SYNC1 protein GI:5670315 [SP|Q9SW96] from [Arabidopsis thaliana]" 6 4 6 13 At1g71020 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 6 4 6 14 At1g71200 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 4 6 15 At1g71250 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 lipase/acylhydrolase with GDSL-like motif" 6 4 6 16 At1g71410 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 6 4 6 17 At1g71470 hypothetical protein 6 4 6 18 At1g71710 "inositol polyphosphate 5-phosphatase, putative similar to inositol polyphosphate 5-phosphatase I [Arabidopsis thaliana] GI:10444261" 6 4 6 19 At1g71770 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] 6 4 6 20 At1g74510 "kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646 F-box domain" 6 4 6 21 At1g74550 "cytochrome P450, putative similar to cytochrome P450 98A3 (SP:O22203)[Arabidopsis thaliana]; cytochrome P450 (GB:O48922) [Glycine max]; contains Pfam profile: PF00067 cytochrome P450" 6 4 6 22 At1g74750 pentatricopeptide (PPR) repeat-containing protein low similarity to post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat 6 4 6 23 At1g74810 anion exchange family protein contains Pfam profile: PF00955 Anion exchanger family 6 4 6 24 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 6 4 6 25 At1g75040 pathogenesis-related protein 5 (PR-5) identical to SP|P28493 Pathogenesis-related protein 5 precursor (PR-5) {Arabidopsis thaliana}; contains Pfam profile: PF00314 Thaumatin family 6 4 7 1 At1g75200 "flavodoxin family protein / radical SAM domain-containing protein contains Pfam profiles PF00258: Flavodoxin, PF04055: radical SAM domain protein" 6 4 7 2 At1g75250 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 6 4 7 3 AT5G57480 PC-1 D07 6 4 7 4 3XSSC PC-1 D19 6 4 7 5 AT1G29930 PC-1 H07 6 4 7 6 3XSSC PC-1 H19 6 4 7 7 AT3G44150 PC-1 L07 6 4 7 8 3XSSC PC-1 L19 6 4 7 9 AT4G00810 PC-1 P07 6 4 7 10 3XSSC PC-1 P19 6 4 7 11 At1g77980 MADS-box family protein MADS-box protein AGL66 6 4 7 12 At1g78040 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 6 4 7 13 At1g78200 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GB:CAA72341 [Medicago sativa]; contains Pfam profile: PF00481 Protein phosphatase 2C" 6 4 7 14 At1g78260 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif-containing protein SEB-4 GI:8895698 from [Xenopus laevis]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 6 4 7 15 At1g78430 tropomyosin-related similar to Tropomyosin 1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}; similar to enterophilin-2L (GI:12718845) [Cavia porcellus]; similar to latent nuclear antigen (GI:5669894) [Human herpesvirus 8]; similar to multiple ligand-binding protein 1 (GI:1403575) [Streptococcus sp.] 6 4 7 16 At1g78490 cytochrome P450 family protein similar to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana] 6 4 7 17 At1g78650 expressed protein weak similarity to DNA polymerase delta subunit 3 (DNA polymerase delta subunit p66) (Swiss-Prot:Q15054) [Homo sapiens] 6 4 7 18 At1g78690 phospholipid/glycerol acyltransferase family protein similar to SP|Q16635 Tafazzin from Homo sapiens; contains Pfam profile: PF01553 Acyltransferase 6 4 7 19 At2g01260 expressed protein 6 4 7 20 At2g01300 expressed protein 6 4 7 21 At2g01450 "mitogen-activated protein kinase, putative / MAPK, putative (MPK17) mitogen-activated protein kinase (MAPK)(AtMPK17), PMID:12119167" 6 4 7 22 At2g01505 "CLE16, putative CLAVATA3/ESR-Related 16 (CLE16)" 6 4 7 23 At2g01670 "MutT/nudix family protein similar to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 6 4 7 24 At2g01730 "metallo-beta-lactamase family protein simliar to SP|P79101 Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit) {Bos taurus}; contains Pfam profile PF00753: Metallo-beta-lactamase superfamily" 6 4 7 25 At2g01890 "purple acid phosphatase, putative contains Pfam profile: PF00149 calcineurin-like phosphoesterase; identical to purple acid phosphatase (GI:20257479) [Arabidopsis thaliana];" 6 4 8 1 At2g01930 expressed protein 6 4 8 2 At2g05140 "phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein similar to SP|P55195 Phosphoribosylaminoimidazole carboxylase, chloroplast precursor (EC 4.1.1.21) (AIR carboxylase) (AIRC) {Vigna aconitifolia}; contains Pfam profile PF00731: AIR carboxylase" 6 4 8 3 At2g05220 40S ribosomal protein S17 (RPS17B) 6 4 8 4 At2g05440 glycine-rich protein 6 4 8 5 At2g05520 glycine-rich protein (GRP) identical to glycine-rich protein; atGRP (GI:259447) [Arabidopsis thaliana] 6 4 8 6 At2g05752 hypothetical protein 6 4 8 7 At2g05830 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to CIG2 [Nicotiana tabacum] GI:15216226, IDI2 [Hordeum vulgare subsp. vulgare] GI:12407304; weak similarity to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family" 6 4 8 8 At2g06000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 4 8 9 At2g06025 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to streptothricin acetyltransferase homolog [Campylobacter jejuni] GI:6650363; contains Pfam profile PF00583: acetyltransferase, GNAT family" 6 4 8 10 At2g14170 "methylmalonate-semialdehyde dehydrogenase, putative similar to methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253" 6 4 8 11 At2g14260 proline iminopeptidase identical to GP:1710151:U72711 6 4 8 12 At2g14570 SWIM zinc finger family protein 6 4 8 13 At2g14630 hypothetical protein contains Pfam profile PF03004: Plant transposase (Ptta/En/Spm family) 6 4 8 14 At2g14800 hypothetical protein 6 4 8 15 At2g14846 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile PF00234:Protease inhibitor/seed storage/LTP family 6 4 8 16 At2g15020 expressed protein and genefinder 6 4 8 17 At2g15080 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 6 4 8 18 At2g18110 "elongation factor 1-beta, putative / EF-1-beta, putative nearly identical to eEF-1beta [Arabidopsis thaliana] GI:398606" 6 4 8 19 At2g18170 "mitogen-activated protein kinase, putative / MAPK, putative (MPK7) identical to mitogen-activated protein kinase homolog 7 (AtMPK7)[Arabidopsis thaliana] SWISS-PROT:Q39027; PMID:12119167" 6 4 8 20 At2g18300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain ;supported by cDNA gi|20127067|gb|AF488597.1| 6 4 8 21 At2g18350 zinc finger homeobox family protein / ZF-HD homeobox family protein 6 4 8 22 At2g18510 "pre-mRNA splicing factor, putative similar to SP|Q15427 Splicing factor 3B subunit 4 (Spliceosome associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA splicing factor SF3b 49 kDa subunit) {Homo sapiens}; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 6 4 8 23 At2g18570 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 6 4 8 24 At2g18760 "SNF2 domain-containing protein / helicase domain-containing protein similar to SP|Q03468 Excision repair protein ERCC-6 (Cockayne syndrome protein CSB) {Homo sapiens}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 6 4 8 25 At2g18830 hypothetical protein 6 4 9 1 At2g21470 "SUMO activating enzyme 2 (SAE2) nearly identical to SUMO activating enzyme 2 [Arabidopsis thaliana] GI:22652854; contains Pfam profiles PF00899: ThiF family, PF02134: Repeat in ubiquitin-activating (UBA) protein" 6 4 9 2 At2g21530 forkhead-associated domain-containing protein / FHA domain-containing protein 6 4 9 3 At2g21710 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 6 4 9 4 At2g21780 expressed protein 6 4 9 5 At2g21940 "shikimate kinase, putative similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202" 6 4 9 6 At2g21980 hypothetical protein 6 4 9 7 At2g22170 "lipid-associated family protein contains PLAT/LH2 (Polycystin-1, Lipoxygenase, Alpha-Toxin/Lipoxygenase homology) domain Pfam:PF01477" 6 4 9 8 At2g22250 "aminotransferase class I and II family protein similar to aspartate aminotransferase from Bacillus stearothermophilus SP|Q59228, Thermus aquaticus SP|O33822; contains Pfam profile PF00155 aminotransferase, classes I and II" 6 4 9 9 At2g25130 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 6 4 9 10 At2g25190 expressed protein 6 4 9 11 At2g25355 exonuclease-related similar to Exosome complex exonuclease RRP40 (EC 3.1.13.-) (Ribosomal RNA processing protein 40) (p10) (CGI-102) (Swiss-Prot:Q9NQT5) [Homo sapiens] 6 4 9 12 At2g25430 epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; 6 4 9 13 At2g25605 expressed protein 6 4 9 14 At2g25630 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 6 4 9 15 At2g25780 hypothetical protein 6 4 9 16 At2g25840 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 6 4 9 17 At2g28460 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 6 4 9 18 At2g28520 "vacuolar proton ATPase, putative similar to Swiss-Prot:Q93050 vacuolar proton translocating ATPase 116 kDa subunit A isoform 1 (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit, Vacuolar proton pump subunit 1, Vacuolar adenosine triphosphatase subunit Ac116) [Homo sapiens]" 6 4 9 19 At2g28660 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 6 4 9 20 At2g28720 "histone H2B, putative strong similarity to histone H2B Arabidopsis thaliana GI:2407802, Gossypium hirsutum SP|O22582; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 6 4 9 21 At2g28890 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 6 4 9 22 At2g28950 "expansin, putative (EXP6) similar to expansin GI:2828241 from [Brassica napus]; contains Pfam profile PF01357: Pollen allergen" 6 4 9 23 At2g29130 "laccase, putative / diphenol oxidase, putative similar to laccase [Liriodendron tulipifera][GI:1621467]" 6 4 9 24 At2g29200 pumilio/Puf RNA-binding domain-containing protein similar to BPM [Hordeum vulgare] GI:20513851 6 4 9 25 At2g31865 poly (ADP-ribose) glycohydrolase (PARG) family protein contains Pfam profile: PF05028 poly (ADP-ribose) glycohydrolase (PARG) 6 4 10 1 At2g31920 expressed protein 6 4 10 2 At2g32080 PUR alpha-1 protein identical to PUR alpha-1 GI:5081612 from [Arabidopsis thaliana]; contains Pfam profile: PF04845 PurA ssDNA and RNA-binding protein 6 4 10 3 At2g32130 "expressed protein contains Pfam domain, PF04859: Plant protein of unknown function (DUF641)" 6 4 10 4 At2g32275 Expressed protein 6 4 10 5 At2g32320 expressed protein contains Pfam profile: PF04446 family of unknown function (DUF549) 6 4 10 6 At2g32480 "membrane-associated zinc metalloprotease, putative similar to Hypothetical zinc metalloprotease All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.} Pfam PF00595: PDZ domain (Also known as DHR or GLGF); contains TIGRFAM TIGR00054: membrane-associated zinc metalloprotease, putative" 6 4 10 7 At2g32540 "cellulose synthase family protein similar to cellulose synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882]" 6 4 10 8 At2g35120 "glycine cleavage system H protein, mitochondrial, putative similar to SP|Q39732 Glycine cleavage system H protein, mitochondrial precursor {Flaveria anomala}; contains Pfam profile PF01597: Glycine cleavage H-protein" 6 4 10 9 At2g35170 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related low similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 6 4 10 10 At2g35340 "RNA helicase, putative similar to ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 6 4 10 11 At2g35390 "ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) identical to phosphoribosyl diphosphate synthetase 1 (ribose-phosphate pyrophosphokinase 1 (PRS I) [Arabidopsis thaliana] GI:633140, SP|Q42581" 6 4 10 12 At2g35550 expressed protein 6 4 10 13 At2g35612 expressed protein ; expression supported by MPSS 6 4 10 14 At2g35733 hypothetical protein 6 4 10 15 At2g35780 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 6 4 10 16 At2g38370 expressed protein 6 4 10 17 At2g38430 expressed protein 6 4 10 18 At2g38610 KH domain-containing protein 6 4 10 19 At2g38670 "ethanolamine-phosphate cytidylyltransferase, putative / phosphorylethanolamine transferase, putative / CTP:phosphoethanolamine cytidylyltransferase, putative similar to SP|Q99447 Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14) {Homo sapiens}; contains Pfam profile PF01467: Cytidylyltransferase" 6 4 10 20 At2g38810 "histone H2A, putative strong similarity to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 6 4 10 21 At2g38840 "guanylate-binding family protein similar to SP|Q01514 Interferon-induced guanylate-binding protein 1 (Guanine nucleotide-binding protein 1) (Interferon-gamma inducible protein MAG-1) {Mus musculus}; contains Pfam profile PF02263: Guanylate-binding protein, N-terminal domain" 6 4 10 22 At2g38995 expressed protein 6 4 10 23 At2g39030 "GCN5-related N-acetyltransferase (GNAT) family protein similar to SP|Q9SMB8 Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl- CoA: tyramine N-hydroxycinnamoyltransferase) {Nicotiana tabacum}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 6 4 10 24 At2g41560 "calcium-transporting ATPase 4, plasma membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical to SP|O22218 Calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) {Arabidopsis thaliana}" 6 4 10 25 At2g41610 expressed protein 6 4 11 1 At2g41740 villin 2 (VLN2) nearly identical to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115 6 4 11 2 At2g41800 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 6 4 11 3 At2g41945 expressed protein 6 4 11 4 At2g42000 plant EC metallothionein-like family 15 protein 84 C-terminal residues identical to EC protein homolog 1 (SP:P93746) {Arabidopsis thaliana}; contains Pfam PF02068: Plant PEC family metallothionein profile; 6 4 11 5 At2g42150 "DNA-binding bromodomain-containing protein contains Pfam domains, PF00439: Bromodomain and PF00249: Myb-like DNA-binding domain" 6 4 11 6 At2g42200 squamosa promoter-binding protein-like 9 (SPL9) identical to squamosa promoter binding protein-like 9 [Arabidopsis thaliana] GI:5931673; contains Pfam profile PF03110: SBP domain 6 4 11 7 At2g44820 expressed protein 6 4 11 8 At2g44870 expressed protein 6 4 11 9 At2g45010 "expressed protein weak similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 6 4 11 10 At2g45070 sec61beta family protein similar to SP|P52870 Protein transport protein SEC61 beta 1 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF03911: Sec61beta family 6 4 11 11 At2g45250 expressed protein 6 4 11 12 At2g45310 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 6 4 11 13 At2g45500 "AAA-type ATPase family protein similar to SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains Pfam profiles PF00004: ATPase AAA family, PF04212: MIT domain" 6 4 11 14 At2g45560 cytochrome P450 family protein 6 4 11 15 At2g48150 "glutathione peroxidase, putative " 6 4 11 16 At2g19340 "membrane protein, putative contains 3 transmembrane domains;" 6 4 11 17 At3g01130 expressed protein 6 4 11 18 At3g01180 "glycogen synthase, putative similar to glycogen synthase Q43847 from [Solanum tuberosum]" 6 4 11 19 At3g01330 "transcription factor, putative / E2F-like repressor E2L2 (E2L2) identical to E2F-like repressor E2L2 [Arabidopsis thaliana] GI:20502506" 6 4 11 20 At3g01380 phosphatidylinositolglycan class N (PIG-N) family protein similar to phosphatidylinositolglycan class N short form GB:BAA82620 [gi:5631308] [Mus musculus] 6 4 11 21 At3g01513 expressed protein ; expression supported by MPSS 6 4 11 22 At3g01560 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 6 4 11 23 At3g04150 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin type2 GB:CAA63023 [SP|P92996], GLP2A [SP|P92999] [Arabidopsis thaliana]" 6 4 11 24 At3g04210 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 6 4 11 25 At3g04380 "SET domain-containing protein (SUVR4) nearly identical to Su(VAR)3-9-related protein 4 [Arabidopsis thaliana] GI:17066863; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4) GI:17066862, which is an SET domain protein similar to Drosophila SU(VAR)3-9" 6 4 12 1 At3g04420 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365 : No apical meristem (NAM) protein 6 4 12 2 At3g04590 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 6 4 12 3 At3g04630 expressed protein 6 4 12 4 At3g04770 40S ribosomal protein SA (RPSaB) identical to p40 protein homolog GB:AAB67866 [Arabidopsis thaliana]; similar to 40S ribosomal protein SA (P40) GB:O65751 [Cicer arietinum] 6 4 12 5 At3g04810 "protein kinase, putative similar to LSTK-1-like kinase [Lycopersicon esculentum] GI:15637110; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 6 4 12 6 At3g07330 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 6 4 12 7 At3g07380 expressed protein 6 4 12 8 At3g07525 "autophagocytosis-associated family protein contains autophagocytosis associated protein C-terminal domain, Pfam:PF03987" 6 4 12 9 At3g07560 glycine-rich protein 6 4 12 10 At3g07720 kelch repeat-containing protein similar to epithiospecifier (GI:16118838) [Arabidopsis thaliana]; contains Pfam PF01344: Kelch motif (5 repeats) 6 4 12 11 At3g07760 expressed protein 6 4 12 12 At3g07910 expressed protein 6 4 12 13 At3g07940 "zinc finger and C2 domain protein, putative similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana];contains Pfam profile: PF01412 Putative GTP-ase activating protein for Arf" 6 4 12 14 At3g10915 "reticulon family protein low similarity to rS-Rex-s [Rattus norvegicus] GI:1143717, neuroendocrine-specific protein C [Homo sapiens] GI:307311; contains Pfam profile PF02453: Reticulon" 6 4 12 15 At3g10960 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 6 4 12 16 At3g11090 LOB domain family protein / lateral organ boundaries domain family protein (LBD21) identical to SP|Q9SRL8 Putative LOB domain protein 21 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 6 4 12 17 At3g11160 expressed protein 6 4 12 18 At3g11320 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, phosphate translocator [Nicotiana tabacum] GI:403023; contains Pfam profile: PF00892 Integral membrane protein DUF6" 6 4 12 19 At3g11380 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 4 12 20 At3g11500 "small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative similar to SWISS-PROT:Q15357 small nuclear ribonucleoprotein G (snRNP-G, Sm protein G, Sm-G, SmG) [Homo sapiens]" 6 4 12 21 At3g11540 gibberellin signal transduction protein (SPINDLY) identical to spindly GB:AAC49446 (GI:1589778) [Arabidopsis thaliana]; contains Pfam profile PF00515 TPR Domain 6 4 12 22 At3g13930 "dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase [Zea mays] GI:5669871; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain" 6 4 12 23 At3g13990 hydroxyproline-rich glycoprotein family protein 6 4 12 24 At3g14110 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 6 4 12 25 At3g14150 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414" 6 4 13 1 At3g14280 expressed protein 6 4 13 2 At3g14340 expressed protein 6 4 13 3 At3g14490 terpene synthase/cyclase family protein contains Pfam profile: PF01397 terpene synthase family 6 4 13 4 At3g14550 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to SP|Q43133 Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] {Sinapis alba}; contains Pfam profile PF00348: Polyprenyl synthetase" 6 4 13 5 At3g17120 expressed protein 6 4 13 6 At3g17170 ribosomal protein S6 family protein (RFC3) annotation temporarily based on supporting cDNA gi|15620809|dbj|AB057424.1|; contains TIGRfam TIGR00166 and Pfam PF01250 profiles ribosomal protein S6. 6 4 13 7 At3g17300 expressed protein 6 4 13 8 At3g17360 kinesin motor protein-related similar to KLP2 protein GB:CAA63826 from [Xenopus laevis] 6 4 13 9 At3g17510 CBL-interacting protein kinase 1 (CIPK1) identical to CBL-interacting protein kinase 1 [Arabidopsis thaliana] gi|11066952|gb|AAG28776; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 1 (CIPK1) GI:11066951 6 4 13 10 At3g17560 F-box family protein contains F-box domain Pfam:PF00646 6 4 13 11 At3g17700 cyclic nucleotide-binding transporter 1 / CNBT1 (CNGC20) identical to cyclic nucleotide-binding transporter 1 (CNBT1) GI:8131898 from [Arabidopsis thaliana]; member of the cyclic nucleotide-gated channel (CNGC) family- see PMID:11500563 6 4 13 12 At3g17760 "glutamate decarboxylase, putative similar to glutamate decarboxylase GB:Q07346 [Petunia x hybrida] (J. Biol. Chem. 268 (26), 19610-19617 (1993))" 6 4 13 13 At3g20400 hypothetical protein 6 4 13 14 At3g20460 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 6 4 13 15 At3g20630 "ubiquitin-specific protease 14, putative (UBP14) similar to ubiquitin-specific protease 14 GI:11993473 [Arabidopsis thaliana]" 6 4 13 16 At3g20690 F-box protein-related ontains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; contains weak hit to Pfam PF00646: F-box domain 6 4 13 17 At3g20850 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 4 13 18 At3g20900 expressed protein 6 4 13 19 At3g21130 F-box family protein contains Pfam profile: PF00646 F-box domain 6 4 13 20 At3g21175 zinc finger (GATA type) family protein similar to zinc finger protein ZIM gi:8918533 from [Arabidopsis thaliana]; contains Pfam PF00320: GATA zinc finger 6 4 13 21 At3g23860 GTP-binding protein-related low similarity to SP|Q99ME9 Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) {Mus musculus} 6 4 13 22 At3g23920 "beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative similar to beta-amylase enzyme [Arabidopsis thaliana] GI:6065749, beta-amylase PCT-BMYI from [Solanum tuberosum]; contains Pfam profile PF01373: Glycosyl hydrolase family 14" 6 4 13 23 At3g24090 "glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative / hexosephosphate aminotransferase, putative / glucosamine-6-phosphate synthase, putative / D-fructose-6-phosphate amidotransferase, putative / GLCN6P synthase, putative similar to SP|O94808 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6- phosphate amidotransferase 2) {Homo sapiens}; contains Pfam profiles PF00310: Glutamine amidotransferases class-II, PF01380:SIS domain" 6 4 13 24 At3g24130 pectinesterase family protein contains Pfam profile: PF01095 Pectinesterase 6 4 13 25 At3g24290 "ammonium transporter, putative similar to SP|Q9SQH9|AT13_ARATH Ammonium transporter 1, member 3 (AtAMT1;3) {Arabidopsis thaliana}; contains Pfam profile PF00909: Ammonium Transporter Family" 6 4 14 1 At3g24340 "SNF2 domain-containing protein / helicase domain-containing protein similar to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 6 4 14 2 At3g24515 "ubiquitin-conjugating enzyme, putative similar to Ubiquitin-conjugating enzyme E2 (Ubiquitin-protein ligase) (Ubiquitin carrier protein) from {Xenopus laevis} SP|P51669, {Schizosaccharomyces pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 6 4 14 3 At3g24550 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 6 4 14 4 At3g27310 expressed protein 6 4 14 5 At3g27360 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 6 4 14 6 At3g27520 expressed protein 6 4 14 7 At3g27580 "protein kinase, putative similar to serine/threonine protein kinase [Arabidopsis thaliana] gi|217861|dbj|BAA01715" 6 4 14 8 At3g27770 expressed protein 6 4 14 9 At3g27840 "50S ribosomal protein L12-2, chloroplast (CL12-B) identical to ribosomal protein L12 GB:X68046 [Arabidopsis thaliana] (J. Biol. Chem. 269 (10), 7330-7336 (1994))" 6 4 14 10 At3g28010 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 6 4 14 11 At3g28070 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575 6 4 14 12 At3g32270 hypothetical protein similar to putative replication protein A1 GB:AAC95163 GI:4006821 from [Arabidopsis thaliana] 6 4 14 13 At3g32896 expressed protein ; expression supported by SAGE 6 4 14 14 At3g33572 hypothetical protein 6 4 14 15 At3g42060 myosin heavy chain-related 6 4 14 16 At3g42250 hypothetical protein 6 4 14 17 At3g42340 "hypothetical protein various predicted Helicases, Arabidopsis thaliana" 6 4 14 18 At3g42550 "aspartyl protease family protein weak similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 6 4 14 19 At3g42600 hypothetical protein 6 4 14 20 At3g45710 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 4 14 21 At3g45760 "hypothetical protein hypothetical protein At2g39740 - Arabidopsis thaliana, EMBL:AC003000" 6 4 14 22 At3g45930 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 6 4 14 23 At3g45990 "actin-depolymerizing factor, putative similar to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 6 4 14 24 At3g46170 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 6 4 14 25 At3g46230 17.4 kDa class I heat shock protein (HSP17.4-CI) identical to 17.4 kDa class I heat shock protein SP:P19036 from [Arabidopsis thaliana] 6 4 15 1 At3g46420 "leucine-rich repeat family protein / protein kinase family protein contains leucine rich repeat (LRR) domains, INTERPRO:IPR001611; contains serine/threonine protein kinases active-site signature, Prosite:PS00108" 6 4 15 2 At3g46480 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to gibberellin 20-oxidase [gi:4678370]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 6 4 15 3 At3g49270 expressed protein 6 4 15 4 At3g49310 expressed protein contains PF05631: Protein of unknown function (DUF791) 6 4 15 5 At3g49490 expressed protein 6 4 15 6 At3g49550 expressed protein 6 4 15 7 At3g49730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 4 15 8 At3g49790 "expressed protein predicted protein, Arabidopsis thaliana" 6 4 15 9 At3g49970 "phototropic-responsive protein, putative similar to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 6 4 15 10 At3g50030 hypothetical protein 6 4 15 11 At3g52720 carbonic anhydrase family protein low similarity to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 6 4 15 12 At3g52770 "expressed protein emm32, Streptococcus pyogenes, EMBL:SPEMM32G" 6 4 15 13 At3g52920 expressed protein weak similarity to enterophilin-2L [Cavia porcellus] GI:12718845; contains Pfam profile PF04949: Family of unknown function (DUF662) 6 4 15 14 At3g52950 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 6 4 15 15 At3g53130 cytochrome P450 family protein similar to Cytochrome P450 97B2 (SP:048921) [Glycine max] 6 4 15 16 At3g53190 pectate lyase family protein similar to pectate lyase 2 GP:6606534 from [Musa acuminata] 6 4 15 17 At3g53330 plastocyanin-like domain-containing protein similar to mavicyanin SP:P80728 from [Cucurbita pepo] 6 4 15 18 At3g53380 "lectin protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain, PF00138: Legume lectins alpha domain, and PF00139: Legume lectins beta domain" 6 4 15 19 At3g55980 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat" 6 4 15 20 At3g56040 expressed protein 6 4 15 21 At3g56200 "amino acid transporter family protein low similarity to N system amino acids transporter NAT-1 [Mus musculus] GI:7406950; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 6 4 15 22 At3g56260 expressed protein 6 4 15 23 At3g56440 WD-40 repeat protein family contains 4 WD-40 repeats (PF00400) (2 weak); PS00778 Histidine acid phosphatases active site signature; similar to Gsa12p (GI:18307769) {Pichia pastoris}similar to uncharacterized protein JM5 (GP:3114828) [Homo sapiens] 6 4 15 24 At3g56500 serine-rich protein-related contains some similarity to serine-rich proteins 6 4 15 25 At3g56680 expressed protein 6 4 16 1 At3g56740 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 6 4 16 2 At3g59550 cohesion family protein SYN3 (SYN3) nearly identical to cohesion family protein SYN3 [Arabidopsis thaliana] GI:12006362; supporting cDNA gi|12006361|gb|AF281155.1|AF281155 6 4 16 3 At3g59620 hypothetical protein 6 4 16 4 At3g59770 "sacI homology domain-containing protein / WW domain-containing protein contains Pfam profiles PF00397: WW domain, PF02383: SacI homology domain; identical to cDNA SAC domain protein 9 (SAC9) GI:31415734" 6 4 16 5 At3g59830 "ankyrin protein kinase, putative similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674" 6 4 16 6 At3g59970 methylenetetrahydrofolate reductase 1 (MTHFR1) identical to methylenetetrahydrofolate reductase MTHFR1 [Arabidopsis thaliana] GI:5911425 6 4 16 7 At3g60030 "squamosa promoter-binding protein-like 12 (SPL12) identical to squamosa promoter binding protein-like 12 [Arabidopsis thaliana] GI:6006395; contains Pfam profiles PF03110: SBP domain, PF00023: Ankyrin repeat" 6 4 16 8 At3g60200 "expressed protein hypothetical proteins At2g44600 - Arabidopsis thaliana, EMBL:AAC27462" 6 4 16 9 At3g60250 "casein kinase II beta chain, putative (CKB3) similar to casein kinase II beta-3 chain (CK II) [Arabidopsis thaliana SWISS-PROT:O81275" 6 4 16 10 At3g62980 transport inhibitor response 1 (TIR1) (FBL1) E3 ubiquitin ligase SCF complex F-box subunit; identical to transport inhibitor response 1 GI:2352492 from [Arabidopsis thaliana] 6 4 16 11 At3g63040 "expressed protein predicted protein, C.elegans" 6 4 16 12 At3g63220 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 4 16 13 At3g63250 homocysteine S-methyltransferase 2 (HMT-2) 99.7% identical to homocysteine S-methyltransferase AtHMT-2 (GI:6685163) [Arabidopsis thaliana] 6 4 16 14 At3g63390 expressed protein 6 4 16 15 At3g63420 heterotrimeric G protein gamma-subunit (AGG1) 6 4 16 16 At4g00030 plastid-lipid associated protein PAP / fibrillin family protein contains Pfam profile PF04755: PAP_fibrillin 6 4 16 17 At4g00100 40S ribosomal protein S13 (RPS13A) similar to ribosomal protein S13; PF00312 (View Sanger Pfam): ribosomal protein S15; identical to cDNA AtRPS13A mRNA for cytoplasmic ribosomal protein S13 GI:6521011 6 4 16 18 At4g02460 "DNA mismatch repair protein, putative similar to SP|P54278 PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) {Homo sapiens}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF01119: DNA mismatch repair protein, C-terminal domain" 6 4 16 19 At4g02510 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 6 4 16 20 At4g02660 "WD-40 repeat family protein / beige-related contains Pfam PF00400: WD domain, G-beta repeat; similar to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal trafficking regulator - Bos taurus, EMBL: AF114785" 6 4 16 21 At4g02715 expressed protein 6 4 16 22 At4g02880 expressed protein 6 4 16 23 At4g02920 expressed protein 6 4 16 24 At4g03110 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327, CUG-BP and ETR-3 like factor 3 [Homo sapiens] GI:12746392; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 6 4 16 25 At4g03140 short-chain dehydrogenase/reductase (SDR) family protein similar to stem secoisolariciresinol dehydrogenase GI:13752458 from {Forsythia x intermedia}; similar to sex determination protein tasselseed 2 SP:P50160 from [Zea mays] 6 4 17 1 At4g07868 hypothetical protein 6 4 17 2 At4g07960 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 6 4 17 3 At4g08180 "oxysterol-binding family protein similar to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 6 4 17 4 At4g08240 expressed protein 6 4 17 5 At4g08380 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 6 4 17 6 At4g08450 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 4 17 7 At4g08630 expressed protein ; expression supported by MPSS 6 4 17 8 At4g08690 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650: CRAL/TRIO domain; similar to polyphosphoinositide binding protein Ssh2p (GI:2739046) [Glycine max]; similar to SEC14-like protein (GB:U82515) [D. discoideum] 6 4 17 9 At4g11510 expressed protein ; expression supported by MPSS 6 4 17 10 At4g11580 "F-box family protein predicted protein, Caenorhabditis elegans, PIR2:S44609 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250" 6 4 17 11 At4g11750 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 6 4 17 12 At4g11810 "SPX (SYG1/Pho81/XPR1) domain-containing protein weak similarity to SP|P51564 Tetracycline resistance protein, class H {Pasteurella multocida}, SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF03105: SPX domain" 6 4 17 13 At4g11970 YT521-B-like family protein contains Pfam profile PF04146: YT521-B-like family 6 4 17 14 At4g12010 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 6 4 17 15 At4g12200 zinc knuckle (CCHC-type) family protein contains Pfam profile PF00098: Zinc knuckle 6 4 17 16 At4g12270 "copper amine oxidase family protein contains similarity to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855; contains Pfam domains PF02728: Copper amine oxidase, N3 domain and PF02727: Copper amine oxidase, N2 domain" 6 4 17 17 At4g14760 M protein repeat-containing protein contains Pfam profile: PF02370 M protein repeat 6 4 17 18 At4g14810 hypothetical protein 6 4 17 19 At4g14950 expressed protein 6 4 17 20 At4g14990 expressed protein 6 4 17 21 At4g15120 VQ motif-containing protein contains PF05678: VQ motif 6 4 17 22 At4g15200 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 6 4 17 23 At4g15340 pentacyclic triterpene synthase (04C11) identical to pentacyclic triterpene synthase [gi:6650208] [PMID:11247608] 6 4 17 24 At4g15393 cytochrome P450 family protein similar to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; contains Pfam PF00067: Cytochrome P450 6 4 17 25 At4g17860 "hypothetical protein predicted protein, Arabidopsis thaliana, PATCHX:E327543 contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 6 4 18 1 At4g17910 "zinc finger (C3HC4-type RING finger) family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam domains PF01535: PPR repeat and PF00097: Zinc finger, C3HC4 type (RING finger)" 6 4 18 2 At4g18060 SH3 domain-containing protein 3 (SH3P3) nearly identical to SH3 domain-containing protein 3 [Arabidopsis thaliana] GI:16974680; contains Pfam profile PF00018: SH3 domain 6 4 18 3 At4g18110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 4 18 4 At4g18290 "inward rectifying potassium channel (KAT2) identical to inward rectifying K+ channel [Arabidopsis thaliana] gi|12666980|emb|CAC28122; Shaker-type channel (1P/6TM), PMID:11500563" 6 4 18 5 At4g18330 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site." 6 4 18 6 At4g18450 "ethylene-responsive factor, putative similar to ethylene response factor 1 GB:AAD03544 GI:4128208 from [Arabidopsis thaliana]; EREBP-1 (Ethylene-inducible DNA binding protein that interact with an ethylene-responsive element) - Nicotiana tabacum, PATCHX:D1007899" 6 4 18 7 At4g18500 hypothetical protein 6 4 18 8 At4g21280 "oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) identical to SP|Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) {Arabidopsis thaliana}; similar to SP|P12301 Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) {Spinacia oleracea}; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ)" 6 4 18 9 At4g21330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 6 4 18 10 At4g21490 pyridine nucleotide-disulphide oxidoreductase family protein similar to GI:3718005 alternative NADH-dehydrogenase {Yarrowia lipolytica}; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase 6 4 18 11 At4g21550 "transcriptional factor B3 family protein low similarity to SP|Q01593 Abscisic acid-insensitive protein 3 {Arabidopsis thaliana}, SP|P37398 Viviparous protein homolog {Oryza sativa}; contains Pfam profile PF02362: B3 DNA binding domain" 6 4 18 12 At4g21700 hypothetical protein 6 4 18 13 At4g21760 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to dalcochinin 8'-O-beta-glucoside beta-glucosidase precursor (GI:6118076) [Dalbergia cochinchinensis] 6 4 18 14 At4g21910 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 6 4 18 15 At4g21960 peroxidase 42 (PER42) (P42) (PRXR1) identical to SP|Q9SB81 Peroxidase 42 precursor (EC 1.11.1.7) (Atperox P42) (PRXR1) (ATP1a/ATP1b) {Arabidopsis thaliana} 6 4 18 16 At4g24500 hydroxyproline-rich glycoprotein family protein 6 4 18 17 At4g24550 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 6 4 18 18 At4g24710 "AAA-type ATPase family protein similar to HPV16 E1 protein binding protein [Homo sapiens] gi|2232019|gb|AAB64095; contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 6 4 18 19 At4g24740 protein kinase (AFC2) identical to protein kinase AFC2 [Arabidopsis thaliana] SWISS-PROT:P51567 6 4 18 20 At4g24930 "thylakoid lumenal 17.9 kDa protein, chloroplast SP:Q9SW33;GI:17369630;PMID:11719511; similar to expressed protein gi:12321169 {Oryza sativa} " 6 4 18 21 At4g24975 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 6 4 18 22 At4g25140 glycine-rich protein / oleosin 6 4 18 23 At4g25200 23.6 kDa mitochondrial small heat shock protein (HSP23.6-M) contains Pfam profile PF00011: Hsp20/alpha crystallin family 6 4 18 24 At4g27750 expressed protein 6 4 18 25 At4g27800 protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1) identical to SP|P49599|P2C3_ARATH Protein phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis thaliana}; similar to protein phosphatase-2C; PP2C (GI:3643090) [Mesembryanthemum crystallinum] 6 4 19 1 At4g27960 "ubiquitin-conjugating enzyme E2-17 kDa 9 (UBC9) E2; identical to gi:297883, SP:P35132; identical to cDNA UBC9 for ubiquitin conjugating enzyme homolog GI:297883" 6 4 19 2 At4g28005 expressed protein ; expression supported by MPSS 6 4 19 3 At4g28150 expressed protein 6 4 19 4 At4g28200 expressed protein 6 4 19 5 At4g28360 ribosomal protein L22 family protein 6 4 19 6 At4g28400 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase 2C-fission yeast, PIR2:S54297" 6 4 19 7 At4g31000 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum]; contains non-consensus donor splice site AT at exon 4; supported by cDNA gi:17065559 6 4 19 8 At4g31040 proton extrusion protein-related contains weak similarity to Proton extrusion protein pcxA (Swiss-Prot:P75028) [Synechocystis sp.] 6 4 19 9 At4g31170 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 6 4 19 10 At4g31250 "leucine-rich repeat transmembrane protein kinase, putative receptor kinase, Petunia inflata, Patchx:G498278" 6 4 19 11 At4g31430 expressed protein 6 4 19 12 At4g31470 "pathogenesis-related protein, putative similar to pathogenesis related protein-1 from Zea mays GI:3290004; contains Pfam profile PF00188: SCP-like extracellular protein" 6 4 19 13 At4g31615 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 6 4 19 14 At4g31670 "ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to ubiquitin-specific protease 15 (UBP15) [Arabidopsis thaliana] GI:11993475; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF01753: MYND finger" 6 4 19 15 At4g34170 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 4 19 16 At4g34215 expressed protein 6 4 19 17 At4g34340 expressed protein 6 4 19 18 At4g34400 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 6 4 19 19 At4g34555 "40S ribosomal protein S25, putative " 6 4 19 20 At4g34610 "homeodomain-containing protein similaritry to homeotic protein BEL1, Arabidopsis thaliana, PIR2:A57632" 6 4 19 21 At4g34790 auxin-responsive family protein similar to auxin-induced protein X10A (SP:P33080) [Glycine max.] PIR:JQ1099 6 4 19 22 At4g34850 "chalcone and stilbene synthase family protein similar to chalcone synthase homolog PrChS1, Pinus radiata, gb:U90341; similar to anther-specific protein [Nicotiana sylvestris][GI:2326774], YY2 protein [Oryza sativa][GI:2645170]" 6 4 19 23 AT5G57480 PC-1 D07 6 4 19 24 3XSSC PC-1 D19 6 4 19 25 AT1G29930 PC-1 H07 6 4 20 1 3XSSC PC-1 H19 6 4 20 2 AT3G44150 PC-1 L07 6 4 20 3 3XSSC PC-1 L19 6 4 20 4 AT4G00810 PC-1 P07 6 4 20 5 3XSSC PC-1 P19 6 4 20 6 At4g37470 "hydrolase, alpha/beta fold family protein low similarity to SP|Q59093 3-oxoadipate enol-lactonase I (EC 3.1.1.24) (Enol-lactone hydrolase I) (Beta-ketoadipate enol-lactone hydrolase I) {Acinetobacter calcoaceticus}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 6 4 20 7 At4g37530 "peroxidase, putative similar to peroxidase [Arabidopsis thaliana] gi|1402906|emb|CAA66958; identical to Pfam profile PF00141: Peroxidase; identical to cDNA peroxidase ATP37 GI:18874553" 6 4 20 8 At4g37690 "galactosyl transferase GMA12/MNN10 family protein low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 6 4 20 9 At4g37750 ovule development protein aintegumenta (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 6 4 20 10 At4g37930 glycine hydroxymethyltransferase / serine hydroxymethyltransferase / serine/threonine aldolase (SHM1) identical to serine hydroxymethyl transferase [Arabidopsis thaliana] GI:6899945 6 4 20 11 At4g38000 "Dof-type zinc finger domain-containing protein Zn finger protein BBF2aO -Nicotiana tabacum,PID:e246547" 6 4 20 12 At4g38140 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 6 4 20 13 At4g38180 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family and PF04434: SWIM zinc finger" 6 4 20 14 At5g01600 "ferritin 1 (FER1) identical to ferritin [Arabidopsis thaliana] GI:1246401, GI:8163920" 6 4 20 15 At5g01650 macrophage migration inhibitory factor family protein / MIF family protein contains pfam profile: PF001187 Macrophage migration inhibitory factor 6 4 20 16 At5g01790 expressed protein 6 4 20 17 At5g01850 "protein kinase, putative similar to protein kinase [Arabidopsis thaliana] gi|1054633|emb|CAA63387; contains protein kinase domain, Pfam:PF00069" 6 4 20 18 At5g02020 expressed protein 6 4 20 19 At5g02050 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 6 4 20 20 At5g02230 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 6 4 20 21 At5g02280 "synbindin, putative similar to Swiss-Prot:Q9ES56 synbindin (TRS23 homolog) [Mus musculus]" 6 4 20 22 At5g05000 "translocate of chloroplast 34 (TOC34) / GTP-binding protein (OEP34) contains Pfam PF04548: AIG1 family;contains TIGRFAM TIGR00991: GTP-binding protein and TIGR00231: small GTP-binding protein domain; 99.7% identical to atToc34 protein (GI:11557975) [Arabidopsis thaliana]; similar to Chain A, Pea Toc34 - A Novel Gtpase Of The Chloroplast Protein Translocon (GI:1865556) [Pisum sativum]; almost identical to SP:Q38906 Translocase of chloroplast 34; identical to cDNA GTP-binding protein (OEP34) GI:1151243" 6 4 20 23 At5g05060 expressed protein 6 4 20 24 At5g05240 expressed protein similar to unknown protein (gb AAD32815.2) 6 4 20 25 At5g05300 expressed protein similar to unknown protein (gb|AAF01528.1); expression supported by MPSS 6 4 21 1 At5g05430 expressed protein 6 4 21 2 At5g05490 "cohesion family protein SYN1, splice variant 1 (SYN1) identical to SYN1 splice variant 1 [Arabidopsis thaliana] GI:6453715" 6 4 21 3 At5g05620 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} 6 4 21 4 At5g05657 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to hin1 (GP:1619321) {Nicotiana tabacum}; confirmed by cDNA sequence Ceres:19481; confirmed by cDNA sequence Ceres:8166 non-consensus donor splice site (AC) at the exon|intron boundary at 9522; non-consensus acceptor splice site (At) at the intron|exon boundary at 9724; non-consensus donor splice site (GC) at the exon|intron boundary at 10302; non-consensus acceptor splice site (TC) at the intron|exon boundary at 10342; confirmed by cDNA sequence Ceres:8166 6 4 21 5 At5g08335 isoprenylcysteine carboxyl methyltransferase family protein / ICMT family protein similar to SP|O60725 Protein-S isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Isoprenylcysteine carboxylmethyltransferase) {Homo sapiens}; contains Pfam profile PF04140: Isoprenylcysteine carboxyl methyltransferase (ICMT) family 6 4 21 6 At5g08370 "alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative similar to alpha-galactosidase SP:Q42656 from [Coffea arabica]" 6 4 21 7 At5g08520 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 6 4 21 8 At5g08550 expressed protein 6 4 21 9 At5g08730 IBR domain-containing protein contains similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster] 6 4 21 10 At5g09210 hypothetical protein 6 4 21 11 At5g09310 expressed protein 6 4 21 12 At5g09370 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein - Hordeum vulgare, EMBL:AF109195; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 6 4 21 13 At5g12120 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 6 4 21 14 At5g12180 "calcium-dependent protein kinase, putative / CDPK, putative " 6 4 21 15 At5g12330 lateral root primordium 1 (LRP1) identical to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 6 4 21 16 At5g12380 "annexin, putative similar to annexin [Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays] GI:6272285; contains Pfam profile PF00191: Annexin" 6 4 21 17 At5g12900 expressed protein 6 4 21 18 At5g12960 expressed protein 6 4 21 19 At5g13150 "exocyst subunit EXO70 family protein leucine zipper-containing protein - Lycopersicon esculentum, EMBL:Z12127 contains Pfam domain PF03081: Exo70 exocyst complex subunit;" 6 4 21 20 At5g13210 expressed protein 6 4 21 21 At5g15930 plant adhesion molecule 1 (PAM1) identical to plant adhesion molecule 1 [Arabidopsis thaliana] GI:3511223; contains Pfam profile PF00566: TBC domain 6 4 21 22 At5g15990 hypothetical protein very low similarity to tropomyosin [Crassostrea gigas] GI:15419048 6 4 21 23 At5g16170 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 6 4 21 24 At5g16230 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Spinacia oleracea SP|P28645, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 6 4 21 25 At5g16370 "AMP-binding protein, putative similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 5 AMPBP5 (AMPBP5) GI:20799718" 6 4 22 1 At5g16410 "transferase family protein low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase Dianthus caryophyllus GI:3288180, GI:2239091; contains Pfam profile PF02458 transferase family" 6 4 22 2 At5g16580 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 6 4 22 3 At5g16630 DNA repair protein Rad4 family low similarity to SP|Q01831 DNA-repair protein complementing XP-C cells (Xeroderma pigmentosum group C complementing protein) {Homo sapiens}; contains Pfam profile PF03835: DNA repair protein Rad4 6 4 22 4 At5g19210 "DEAD/DEAH box helicase, putative EUKARYOTIC INITIATION FACTOR 4A-II (EIF-4A-II), Homo sapiens, SWISSPROT:IF42_HUMAN" 6 4 22 5 At5g19250 expressed protein 6 4 22 6 At5g19400 expressed protein 6 4 22 7 At5g19450 calcium-dependent protein kinase 19 (CDPK19) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655 6 4 22 8 At5g19630 expressed protein 6 4 22 9 At5g19690 oligosaccharyl transferase STT3 subunit family protein similar to SP|P39007 Oligosaccharyl transferase STT3 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF02516: Oligosaccharyl transferase STT3 subunit 6 4 22 10 At5g19860 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 6 4 22 11 At5g19910 SOH1 family protein contains Pfam profile: PF05669 SOH1 6 4 22 12 At5g23230 "isochorismatase hydrolase family protein low similarity to SP|P45743 Isochorismatase (EC 3.3.2.1) (2,3 dihydro-2,3 dihydroxybenzoate synthase) (Superoxide-inducible protein 1) (SOI1) {Bacillus subtilis}; contains Pfam profile PF00857: isochorismatase family protein" 6 4 22 13 At5g23270 "sugar transporter, putative similar to sugar transport protein [Arabidopsis thaliana] GI:16524, sugar transporter [Medicago truncatula] GI:1353516; contains Pfam profile PF00083: major facilitator superfamily protein" 6 4 22 14 At5g23410 expressed protein similar to Adagio 3 [Arabidopsis thaliana] GI:13487072/FKF1 [Arabidopsis thaliana] GI:6960305 6 4 22 15 At5g23450 "diacylglycerol kinase family protein contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 6 4 22 16 At5g23640 hypothetical protein 6 4 22 17 At5g23700 hypothetical protein 6 4 22 18 At5g23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 6 4 22 19 At5g23890 expressed protein weak similarity to SP|P12957 Caldesmon (CDM) {Gallus gallus} 6 4 22 20 At5g26610 D111/G-patch domain-containing protein contains Pfam PF01585: G-patch domain 6 4 22 21 At5g26751 shaggy-related protein kinase alpha / ASK-alpha (ASK1) identical to shaggy-related protein kinase alpha SP:P43288 GI:460832 from [Arabidopsis thaliana] 6 4 22 22 At5g26900 "WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595) {Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352" 6 4 22 23 At5g26960 "kelch repeat-containing F-box family protein predicted proteins, Arabidopsis thaliana and Oryza sativa; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 6 4 22 24 At5g27150 "sodium proton exchanger / Na+/H+ antiporter (NHX1) identical to Na+/H+ exchanger [Arabidopsis thaliana] gi|6650177|gb|AAF21755 and sodium proton exchanger Nhx1 [Arabidopsis thaliana] gi|4324597|gb|AAD16946; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 6 4 22 25 At5g27220 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} 6 4 23 1 At5g27410 aminotransferase class IV family protein contains Pfam profile: PF01063 aminotransferase class IV 6 4 23 2 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase identical to SP|Q39230 Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) {Arabidopsis thaliana} 6 4 23 3 At5g35525 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 6 4 23 4 At5g35580 "protein kinase, putative similar to auxin-regulated dual specificity cytosolic kinase [Lycopersicon esculentum] gi|14484938|gb|AAK62821" 6 4 23 5 At5g35695 hypothetical protein 6 4 23 6 At5g35737 hypothetical protein 6 4 23 7 At5g35910 "3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein low similarity to SP|Q01780 Polymyositis/scleroderma autoantigen 2 {Homo sapiens}; contains Pfam profiles PF00570: HRDC domain, PF01612: 3'-5' exonuclease" 6 4 23 8 At5g35950 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 6 4 23 9 At5g36120 YGGT family protein contains Pfam profile PF02325: YGGT family (unknown function) 6 4 23 10 At5g36170 "peptide chain release factor, putative similar to SP|P28367 Peptide chain release factor 2 (RF-2) {Bacillus subtilis}; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 6 4 23 11 At5g39390 leucine-rich repeat family protein / protein kinase family protein contains Pfam PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 6 4 23 12 At5g39450 F-box family protein contains Pfam:PF00646 F-box domain ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 4 23 13 At5g39630 vesicle transport v-SNARE family protein similar to v-SNARE AtVTI1a (GI:10177700) Arabidopsis thaliana; contains Pfam profile PF05008: Vesicle transport v-SNARE protein 6 4 23 14 At5g39690 no apical meristem (NAM) protein-related contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana} 6 4 23 15 At5g39860 "bHLH protein putative DNA-binding protein - Arabidopsis thaliana, EMBL:AC011765" 6 4 23 16 At5g39910 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 [Glycine max] GI:5669846; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 6 4 23 17 At5g40090 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 6 4 23 18 At5g40155 expressed protein 6 4 23 19 At5g42890 sterol carrier protein 2 (SCP-2) family protein similar to sterol carrier protein-2 [Homo sapiens] GI:432973; contains Pfam profile PF02036: SCP-2 sterol transfer family 6 4 23 20 At5g42920 expressed protein 6 4 23 21 At5g43060 "cysteine proteinase, putative / thiol protease, putative similar to cysteine proteinase RD21A precursor (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 6 4 23 22 At5g43120 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 6 4 23 23 At5g43280 "enoyl-CoA hydratase/isomerase family protein similar to Delta 3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial (ECH1) from Rattus norvegicus [SP|Q62651], from Homo sapiens [SP|Q13011]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 6 4 23 24 At5g43340 inorganic phosphate transporter identical to inorganic phosphate transporter [Arabidopsis thaliana] GI:3869190 6 4 23 25 At5g43480 hypothetical protein 6 4 24 1 At5g43540 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 6 4 24 2 At5g46115 expressed protein 6 4 24 3 At5g46150 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:835763; GI:4966357; GI:4585976; GI:11994416 from [Arabidopsis thaliana] 6 4 24 4 At5g46290 "3-oxoacyl-[acyl-carrier-protein] synthase I identical to Swiss-Prot:P52410 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) [Arabidopsis thaliana]" 6 4 24 5 At5g46340 O-acetyltransferase-related similar to O-acetyltransferase [Homo sapiens] GI:17016934 6 4 24 6 At5g46490 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 6 4 24 7 At5g46550 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 6 4 24 8 At5g46710 "zinc-binding family protein similar zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 6 4 24 9 At5g46770 expressed protein 6 4 24 10 At5g49400 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 6 4 24 11 At5g49460 "ATP-citrate synthase, putative / ATP-citrate (pro-S-)-lyase, putative / citrate cleavage enzyme, putative strong similarity to ATP:citrate lyase [Capsicum annuum] GI:13160653; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 6 4 24 12 At5g49600 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538; expression supported by MPSS" 6 4 24 13 At5g49650 "xylulose kinase, putative similar to D-xylulokinase [Pichia stipitis] gi|8100400|gb|AAF72328" 6 4 24 14 At5g49790 hypothetical protein low similarity to keratin-associated protein 16.1 [Mus musculus] GI:14030401 6 4 24 15 At5g49850 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 6 4 24 16 At5g50010 expressed protein 6 4 24 17 At5g50070 invertase/pectin methylesterase inhibitor family protein low similarity to pollen-specific protein Bnm1 [Brassica napus] GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 6 4 24 18 At5g52820 "WD-40 repeat family protein / notchless protein, putative similar to notchless [Xenopus laevis] GI:3687833; contains Pfam PF00400: WD domain, G-beta repeat (8 copies)" 6 4 24 19 At5g52880 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 6 4 24 20 At5g53030 expressed protein 6 4 24 21 At5g53070 ribosomal protein L9 family protein contains similarity to ribosomal protein L9 6 4 24 22 At5g53240 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 6 4 24 23 At5g53300 "ubiquitin-conjugating enzyme 10 (UBC10) E2; identical to gi:297877, SP:P35133" 6 4 24 24 At5g53470 "acyl-CoA binding protein, putative / ACBP, putative similar to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057" 6 4 24 25 At5g53520 "oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}, oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 6 4 25 1 At5g56180 "actin-related protein, putative (ARP8) strong similarity to actin-related protein 8A (ARP8) [Arabidopsis thaliana] GI:21427473; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427470|gb|AF507916.1|" 6 4 25 2 At5g56240 expressed protein 6 4 25 3 At5g56400 F-box family protein contains F-box domain Pfam:PF00646 6 4 25 4 At5g56460 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 6 4 25 5 At5g56640 expressed protein similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 6 4 25 6 At5g56700 F-box protein-related contains a partial F-box domain Pfam:PF00646 6 4 25 7 At5g56880 expressed protein 6 4 25 8 At5g56930 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 6 4 25 9 At5g59440 thymidylate kinase family protein similar to thymidylate kinase GI:291900 6 4 25 10 At5g59480 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 6 4 25 11 At5g59670 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 6 4 25 12 At5g59730 "exocyst subunit EXO70 family protein leucine zipper-containing protein, Lycopersicon esculentum, PIR:S21495 contains Pfam domain PF03081: Exo70 exocyst complex subunit;" 6 4 25 13 At5g59880 actin-depolymerizing factor 3 (ADF3) identical to SP|Q9ZSK4 Actin-depolymerizing factor 3 (ADF 3) (AtADF3) {Arabidopsis thaliana} 6 4 25 14 At5g59900 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 6 4 25 15 At5g60060 "F-box family protein various predicted proteins, Arabidopsis thaliana ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250" 6 4 25 16 At5g60120 "AP2 domain-containing transcription factor, putative Similar to Floral homeotic protein APETALA2 protein (SP:P47927) [Arabidopsis thaliana]; homolog HAP2, Hyacinthus orientalis, EMBL:AF134116" 6 4 25 17 At5g62780 DNAJ heat shock N-terminal domain-containing protein contains Pfam PF00226: DnaJ domain; similar to dnaJ (GI:144832) [Clostridium acetobutylicum] 6 4 25 18 At5g62840 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 6 4 25 19 At5g63010 WD-40 repeat family protein contains 4 WD-40 repeats (PF00400);low similarity to photomorphogenesis repressor (COP1) GI:2702280 [Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea nil] 6 4 25 20 At5g63050 expressed protein 6 4 25 21 At5g63180 pectate lyase family protein similar to pectate lyase GP:14289169 from [Salix gilgiana] 6 4 25 22 At5g63250 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 6 4 25 23 At5g63440 "expressed protein contains Pfam PF02594: Uncharacterized ACR, YggU family COG1872" 6 4 25 24 At5g63470 "CCAAT-box binding transcription factor Hap5a, putative " 6 4 25 25 At5g66010 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative similar to Heterogeneous nuclear ribonucleoprotein SP|P55795, SP|P31943, SP|P52597 {Homo sapiens}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain" 6 4 26 1 At5g66040 senescence-associated family protein almost identical to ketoconazole resistant protein GI:928938 from [Arabidopsis thaliana] full-length cDNA: Ceres:101608. 6 4 26 2 At5g66140 20S proteasome alpha subunit D2 (PAD2) (PRS1) (PRC6) identical to SP|O24616 Proteasome subunit alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha subunit D2) {Arabidopsis thaliana} 6 4 26 3 At5g66190 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) from {Pisum sativum} SP|P10933, {Mesembryanthemum crystallinum} SP|P41343, {Spinacia oleracea} SP|P00455; identical to cDNA ferredoxin-NADP+ reductase precursor (petH) GI:5730138" 6 4 26 4 At5g66320 zinc finger (GATA type) family protein 6 4 26 5 At5g66360 "ribosomal RNA adenine dimethylase family protein similar to SP|P41819 Dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF00398: ribosomal RNA adenine dimethylase family protein" 6 4 26 6 At5g66520 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 6 4 26 7 At5g66580 expressed protein 6 4 26 8 3xSSC 3xSSC 6 4 26 9 3xSSC 3xSSC 6 4 26 10 3xSSC 3xSSC 6 4 26 11 3xSSC 3xSSC 6 4 26 12 3xSSC 3xSSC 6 4 26 13 3xSSC 3xSSC 6 4 26 14 3xSSC 3xSSC 6 4 26 15 3xSSC 3xSSC 6 4 26 16 At3g45710 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 6 4 26 17 At3g45760 "hypothetical protein hypothetical protein At2g39740 - Arabidopsis thaliana, EMBL:AC003000" 6 4 26 18 At3g45930 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 6 4 26 19 At3g45990 "actin-depolymerizing factor, putative similar to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 6 4 26 20 At3g46170 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 6 4 26 21 At3g46230 17.4 kDa class I heat shock protein (HSP17.4-CI) identical to 17.4 kDa class I heat shock protein SP:P19036 from [Arabidopsis thaliana] 6 4 26 22 At3g46420 "leucine-rich repeat family protein / protein kinase family protein contains leucine rich repeat (LRR) domains, INTERPRO:IPR001611; contains serine/threonine protein kinases active-site signature, Prosite:PS00108" 6 4 26 23 At3g46480 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to gibberellin 20-oxidase [gi:4678370]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 6 4 26 24 Blank Blank 6 4 26 25 Blank Blank 7 1 1 1 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 7 1 1 2 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 1 1 3 Alien2 Control: Stratagene Spotreport Alien Oligo 7 1 1 4 Alien8 Control: Stratagene Spotreport Alien Oligo 7 1 1 5 atc04 Randomly generated negative control 7 1 1 6 atc10 Randomly generated negative control 7 1 1 7 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 1 1 8 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 7 1 1 9 At1g01920 "SET domain-containing protein low similarity to SP|Q43088 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) {Pisum sativum}; contains Pfam profile PF00856: SET domain" 7 1 1 10 At1g01980 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 7 1 1 11 At1g02090 "COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii [Arabidopsis thaliana] GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced" 7 1 1 12 At1g02120 GRAM domain-containing protein-related contains low similarity to PF02893: GRAM domain 7 1 1 13 At1g02280 "GTP-binding protein (TOC33) identical to atToc33 protein (GI:11557973) [Arabidopsis thaliana]; Carboxyl-terminal end highly similar to GTP-binding protein SP:U43377, location of EST gb|AA394770 and gb|R30089; identical to cDNA for chloroplast atToc33 protein GI:11557972" 7 1 1 14 At1g02330 expressed protein contains similarity to hepatocellular carcinoma-associated antigen 59 GI:7158847 from [Homo sapiens] 7 1 1 15 At1g02500 "S-adenosylmethionine synthetase 1 (SAM1) identical to S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase 1, AdoMet synthetase 1) [Arabidopsis thaliana] SWISS-PROT:P23686" 7 1 1 16 At1g02560 "ATP-dependent Clp protease proteolytic subunit (ClpP1) identical to nClpP1 GB:BAA82065 GI:5360579 from [Arabidopsis thaliana]; contains Pfam profile PF00574: Clp protease; contains TIGRfam profile TIGR00493: ATP-dependent Clp protease, proteolytic subunit ClpP" 7 1 1 17 At1g05180 auxin-resistance protein AXR1 (AXR1) identical to SP|P42744 Auxin-resistance protein AXR1 {Arabidopsis thaliana}; contains Pfam profile PF00899: ThiF family; identical to cDNA ubiquitin activating enzyme E1-related protein (AXR1) GI:304103 7 1 1 18 At1g05220 expressed protein ; expression supported by MPSS 7 1 1 19 At1g05385 photosystem II 11 kDa protein-related similar to Photosystem II 11 kDa protein precursor (SP|P74367)[strain PCC 6803] {Synechocystis sp.} 7 1 1 20 At1g05450 protease inhibitor/seed storage/lipid transfer protein (LTP)-related similar to geranyl diphosphate synthase large subunit [Mentha x piperita] GI:6449052 7 1 1 21 At1g05590 glycosyl hydrolase family 20 protein similar to beta-hexosaminidase precursor SP:P43077 from [Candida albicans] 7 1 1 22 At1g05640 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 7 1 1 23 At1g05785 Got1-like family protein contains Pfam PF04178: Got1-like family profile; contains 4 transmembrane domains; 7 1 1 24 At1g05820 "protease-associated (PA) domain-containing protein contains weak similarity to protease associated (PA) domain proteins, Pfam:PF02225" 7 1 1 25 At1g08310 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 7 1 2 1 At1g08370 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains some similarity to transcription factor [Danio rerio] gi|15617376|emb|CAC69871" 7 1 2 2 At1g08540 "RNA polymerase sigma subunit SigB (sigB) / sigma factor 2 (SIG2) identical to sigma factor SigB [Arabidopsis thaliana] GI:5478446, plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] GI:2879922, sigma factor [Arabidopsis thaliana] GI:2597831, sigma factor 2 (SIG2) [Arabidopsis thaliana] GI:2353173; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 7 1 2 3 At1g08600 "SNF2 domain-containing protein / helicase domain-containing protein similar to SP|P46100 Transcriptional regulator ATRX {Homo sapiens}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; non-consensus GC donor splice site at exon boundary 28614" 7 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 7 1 2 5 At1g08780 "prefoldin, putative similar to Swiss-Prot:Q9NQP4 prefoldin subunit 4 (Protein C-1) [Homo sapiens]" 7 1 2 6 At1g08930 early-responsive to dehydration stress protein (ERD6) / sugar transporter family protein identical to ERD6 protein {Arabidopsis thaliana} GI:3123712; contains Pfam profile PF00083: major facilitator superfamily protein; contains TIGRfam TIGR00879: Sugar transporter 7 1 2 7 At1g08990 "glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-1 from Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730], Oryctolagus cuniculus [SP|P13280]" 7 1 2 8 At1g11590 "pectin methylesterase, putative similar to fruit-specific pectin methylesterase GI:1617583 from [Lycopersicon esculentum]" 7 1 2 9 At1g11650 "RNA-binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains. ESTs gb|T44278, gb|R65195, gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1" 7 1 2 10 At1g11800 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 7 1 2 11 At1g11850 expressed protein 7 1 2 12 At1g11960 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein [Arabidopsis thaliana] GI:15375406 7 1 2 13 At1g12020 expressed protein 7 1 2 14 At1g12180 expressed protein 7 1 2 15 At1g12240 "beta-fructosidase (BFRUCT4) / beta-fructofuranosidase / invertase, vacuolar identical to beta-fructosidase GI:1871503 from [Arabidopsis thaliana]; contains Pfam profile PF00251:Glycosyl hydrolases family 32; identical to cDNA beta-fructosidase (vacuolar form) GI:1321683; similar to SP:Q43857" 7 1 2 16 At1g15010 expressed protein 7 1 2 17 At1g15040 glutamine amidotransferase-related 7 1 2 18 At1g15200 protein-protein interaction regulator family protein contains Pfam PF04696: pinin/SDK/memA/ protein conserved region 7 1 2 19 At1g15220 cytochrome c biogenesis protein family contains Pfam PF03918: Cytochrome C biogenesis protein; similar to Cytochrome c-type biogenesis protein cycL precursor.(SP:P45405) {Bradyrhizobium japonicum} 7 1 2 20 At1g15380 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 7 1 2 21 At1g15410 aspartate-glutamate racemase family contains Pfam profile PF|01177 Aspartate-glutamate racemase family; contains TIGRFAM TIGR00035: aspartate racemase; similar to aspartate racemase (GI:5458794){Pyrococcus abyssi} 7 1 2 22 At1g15580 auxin-responsive protein / indoleacetic acid-induced protein 5 (IAA5) / auxin-induced protein (AUX2-27) identical to SP|P33078 Auxin-responsive protein IAA5 (Indoleacetic acid-induced protein 5) (Auxin-induced protein AUX2-27) {Arabidopsis thaliana} 7 1 2 23 At1g15640 hypothetical protein 7 1 2 24 At1g18420 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 7 1 2 25 At1g18480 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 7 1 3 1 At1g18650 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 7 1 3 2 At1g18700 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI8 DnaJ homolog subfamily B member 7 Mus musculus; contains Pfam profile PF00226 DnaJ domain 7 1 3 3 At1g18890 "calcium-dependent protein kinase 1 (CDPK1) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 7 1 3 4 At1g18960 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain; contains similarity to transcription factor GI:9759592 from [Arabidopsis thaliana] 7 1 3 5 At1g19090 serine/threonine protein kinase (RKF2) nearly identical to receptor-like serine/threonine kinase GI:2465925 from [Arabidopsis thaliana]; intron 3 was added to circumvent a frameshift. Either a sequencing error exists or this may be a pseudogene. 7 1 3 6 At1g19140 expressed protein 7 1 3 7 At1g22040 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 1 3 8 At1g22100 hypothetical protein 7 1 3 9 At1g22260 expressed protein 7 1 3 10 At1g22290 "14-3-3 protein GF14, putative (GRF10) similar to 14-3-3 protein GF14 epsilon GI:5802798 from [Arabidopsis thaliana]" 7 1 3 11 At1g22430 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon esculentum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 7 1 3 12 At1g22490 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 1 3 13 At1g22660 "tRNA-nucleotidyltransferase, putative / tRNA adenylyltransferase, putative similar to tRNA nucleotidyltransferase [Lupinus albus] GI:1139585; contains Pfam profile PF01743: polyA polymerase family protein" 7 1 3 14 At1g22720 "wall-associated kinase, putative contains similarity to serine/threonine kinase gb|Y12531 from Brassica oleracea" 7 1 3 15 At1g26250 "proline-rich extensin, putative similar to extensin gi|1165322|gb|AAB53156; contains proline-rich extensin domains, INTERPRO:IPR002965" 7 1 3 16 At1g26310 "MADS-box protein, putative strong similarity to DNA-binding protein [Brassica rapa subsp. pekinensis] GI:6469345, SP|Q41276 Floral homeotic protein APETALA1 (MADS C) {Sinapis alba}; contains InterPro accession IPR002100: Transcription factor, MADS-box" 7 1 3 17 At1g26500 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 3 18 At1g26560 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 7 1 3 19 At1g26710 expressed protein 7 1 3 20 At1g26770 "expansin, putative (EXP10) similar to expansin At-EXP1 GI:1041702 from [Arabidopsis thaliana]; alpha-expansin gene family, PMID:11641069" 7 1 3 21 At1g26910 "60S ribosomal protein L10 (RPL10B) Nearly identical to ribosomal protein L10.e, Wilm's tumor suppressor homologue, gi|17682 (Z15157), however differences in sequence indicate this is a different member of the L10 family" 7 1 3 22 At1g26960 "homeobox-leucine zipper protein, putative / HD-ZIP transcription factor, putative similar to homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7) (HD-ZIP protein ATHB-3 (SP:Q00466| [Arabidopsis thaliana]; similar to Helianthus annuus gi|349379, and carrot, gi|1435022. Contains Homeobox domain motif" 7 1 3 23 At1g29870 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|O23627 Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis thaliana}; contains Pfam profile PF00587: tRNA synthetase class II core domain (G, H, P, S and T); contains non-consensus TA acceptor splice site at intron 4" 7 1 3 24 At1g29930 "chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2B) identical to SP|P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana}" 7 1 3 25 At1g30080 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]" 7 1 4 1 At1g30130 expressed protein similar to hypothetical protein GI:1469227 from [Brassica oleracea] 7 1 4 2 At1g30320 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 7 1 4 3 At1g30400 glutathione S-conjugate ABC transporter (MRP1) identical to glutathione S-conjugate transporting ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166 7 1 4 4 At1g30540 "ATPase, BadF/BadG/BcrA/BcrD-type family contains Pfam PF01869: BadF/BadG/BcrA/BcrD ATPase family; similar to Transcriptional regulators of NagC/XylR (ROK) family, sugar kinase (GI:15023013) [Clostridium acetobutylicum]; similar to N-acetylglucosamine kinase (EC 2.7.1.59) (GlcNAc kinase) (Swiss-Prot:Q9UJ70) [Homo sapiens]" 7 1 4 5 At1g30600 subtilase family protein Strong similarity to gb|U80583 proteinase TMP from Lycopersicon esculentum and is a member of the PF|00082 subtilase family 7 1 4 6 At1g33560 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 7 1 4 7 At1g33670 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to receptor kinase-like protein GB:AAB82755 GI:2586083 from [Oryza longistaminata] (Science 270 (5243), 1804-1806 (1995))" 7 1 4 8 At1g33860 hypothetical protein 7 1 4 9 At1g33920 lectin-related low similarity to PP2 lectin polypeptide [Cucurbita maxima] GI:410437 7 1 4 10 At1g34070 hypothetical protein 7 1 4 11 At1g34140 "polyadenylate-binding protein, putative / PABP, putative non-consensus splice donor TA at exon 1; similar to polyadenylate-binding protein (poly(A)-binding protein) from [Triticum aestivum] GI:1737492, [Nicotiana tabacum] GI:7673355, {Arabidopsis thaliana} SP|P42731; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 7 1 4 12 At1g34340 esterase/lipase/thioesterase family protein similar to late embryogenesis abundant protein (EMB8) GI:1350544 SP|Q40863 from (Picea glauca); contains Interpro entry IPR000379 esterase/lipase/thioesterase family 7 1 4 13 At1g34380 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 7 1 4 14 At1g44414 hypothetical protein 7 1 4 15 At1g44575 "photosystem II 22kDa protein, chloroplast / CP22 (PSBS) identical to photosystem II 22 kDa protein, chloroplast [precursor] SP:Q9XF91 from [Arabidopsis thaliana]; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 7 1 4 16 At1g44870 hypothetical protein 7 1 4 17 At1g44920 expressed protein 7 1 4 18 At1g45165 Expressed protein 7 1 4 19 At1g45207 "remorin family protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 7 1 4 20 At1g46408 MADS-box family protein contains similarity to MADS-box protein GI:2505875 from [Arabidopsis thaliana] 7 1 4 21 At1g46984 F-box protein-related contains weak hit to Pfam PF00646: F-box domain; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 7 1 4 22 At1g50040 expressed protein 7 1 4 23 At1g50120 expressed protein 7 1 4 24 At1g50340 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 1 4 25 At1g50400 "porin family protein low similarity to haymaker protein [Mus musculus] GI:17834089, mitochondrial outer membrane protein MOM35 [Mus musculus] GI:6650562; contains Pfam profile PF01459: Eukaryotic porin" 7 1 5 1 At1g50590 "pirin, putative similar to SP|O00625 Pirin {Homo sapiens}; contains Pfam profile PF02678: Pirin" 7 1 5 2 At1g50650 "stigma-specific Stig1 family protein low similarity to stigma-specific protein STIG1 [Nicotiana tabacum] GI:496647; contains Pfam profile PF04885: Stigma-specific protein, Stig1" 7 1 5 3 At1g50840 "polI-like DNA polymerase, putative similar to PolI-like DNA polymerase [Oryza sativa] GI:19912795 contains Pfam profiles PF01612: 3'-5' exonuclease, PF00476: DNA polymerase I family A" 7 1 5 4 At1g50920 GTP-binding protein-related similar to GTP-binding protein SP:Q99ME9 from [Mus musculus] 7 1 5 5 At1g53580 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II GI:1644427 from (Arabidopsis thaliana)" 7 1 5 6 At1g53640 hypothetical protein ; expression supported by MPSS 7 1 5 7 At1g53800 expressed protein 7 1 5 8 At1g53860 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 7 1 5 9 At1g54020 "myrosinase-associated protein, putative strong similarity to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216389,GI:1216391 from [Brassica napus]; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 7 1 5 10 At1g54060 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 7 1 5 11 At1g54200 expressed protein 7 1 5 12 At1g54240 hypothetical protein 7 1 5 13 At1g57760 expressed protein 7 1 5 14 At1g57830 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 7 1 5 15 At1g58150 hypothetical protein 7 1 5 16 At1g58210 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) {Petunia integrifolia} 7 1 5 17 At1g58330 "transcription factor-related low similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423, ocs-element binding factor 4 [Arabidopsis thaliana] GI:414613, mas-binding factor MBF3 [Solanum tuberosum] GI:13195751; supporting cDNA gi|6520153|dbj|AB028196.1|" 7 1 5 18 At1g58390 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 7 1 5 19 At1g58983 "40S ribosomal protein S2, putative similar to ribosomal protein S2 GI:939717 from [Urechis caupo]" 7 1 5 20 At1g59500 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 7 1 5 21 At1g62370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 1 5 22 At1g62430 phosphatidate cytidylyltransferase / CDP-diglyceride synthetase (CDS1) identical to SP|O04928 Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) {Arabidopsis thaliana} 7 1 5 23 At1g62620 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase 3 (FMO3) from Rattus norvegicus [GI:12006730], FMO1 from Canis familiaris] [GI:15420722], FMO1 from Homo sapiens [SP|Q01740]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like" 7 1 5 24 At1g62690 expressed protein 7 1 5 25 At1g62830 amine oxidase family protein / SWIRM domain-containing protein contains Pfam profile: PF01593 Flavin containing amine oxidase 7 1 6 1 At1g62880 cornichon family protein contains Pfam profile: PF03311 cornichon protein 7 1 6 2 At1g63050 "membrane bound O-acyl transferase (MBOAT) family protein low similarity to porcupine from [Xenopus laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516; contains Pfam profile PF03062: MBOAT family" 7 1 6 3 At1g63100 scarecrow transcription factor family protein similar to GI:1497987 from [Arabidopsis thaliana] (Cell (1996) In press) 7 1 6 4 At1g65800 "S-receptor protein kinase, putative similar to PIR|T05180|T05180 S-receptor kinase ARK3 precursor - [Arabidopsis thaliana]" 7 1 6 5 At1g65860 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase FMO3 (dimethylaniline monoxygenase (N-oxide forming) 3) GI:349533 [SP|P32417] from Oryctolagus cuniculus, [SP|P97501] from Mus musculus; contains Pfam profile PF00743 Flavin-binding monooxygenase-like domain" 7 1 6 6 At1g66045 hypothetical protein 7 1 6 7 At1g66100 "thionin, putative similar to thionin [Arabidopsis thaliana] GI:1181533" 7 1 6 8 At1g66240 "copper homeostasis factor, putative / copper chaperone, putative (CCH) similar to gi:3168840 contains Pfam profile PF00403: Heavy-metal-associated domain" 7 1 6 9 At1g66300 F-box family protein contains F-box domain Pfam:PF00646 7 1 6 10 At1g66470 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 1 6 11 At1g66520 "formyltransferase, putative similar to methionyl-tRNA formyltransferase [strain N315- Staphylococcus aureus] SWISS-PROT:Q99UQ2" 7 1 6 12 At1g69230 expressed protein 7 1 6 13 At1g69260 expressed protein 7 1 6 14 At1g69400 transducin family protein / WD-40 repeat family protein similar to mitotic checkpoint protein (GI:9294423) {Arabidopsis thaliana}; similar to mitotic checkpoint protein (BUB3) (SP:O43684) (Homo sapiens) 7 1 6 15 At1g69450 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 7 1 6 16 At1g69560 myb family transcription factor (MYB105) contains Pfam profile: PF00249: Myb-like DNA-binding domain 7 1 6 17 At1g69630 F-box family protein contains F-box domain Pfam:PF00646 7 1 6 18 At1g69810 WRKY family transcription factor 7 1 6 19 At1g69870 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 7 1 6 20 At1g72670 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 7 1 6 21 At1g72730 "eukaryotic translation initiation factor 4A, putative / eIF-4A, putative similar to Eukaryotic initiation factor 4A-10 GB:P41382 [Nicotiana tabacum]; identical to (putative) RNA helicase GB:CAA09211 [Arabidopsis thaliana] (Nucleic Acids Res. 27 (2), 628-636 (1999))" 7 1 6 22 At1g72900 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 7 1 6 23 At1g72960 root hair defective 3 GTP-binding (RHD3) family protein contains Pfam profile: PF05879 root hair defective 3 GTP-binding protein (RHD3) 7 1 6 24 At1g73150 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 7 1 6 25 At1g73190 "tonoplast intrinsic protein, alpha / alpha-TIP (TIP3.1) identical to SP|P26587 Tonoplast intrinsic protein, alpha (Alpha TIP) [Arabidopsis thaliana] (Plant Physiol. 99, 561-570 (1992))" 7 1 7 1 At1g73340 cytochrome P450 family protein similar to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450 7 1 7 2 At1g73390 expressed protein 7 1 7 3 AT5G57480 PC-1 A06 7 1 7 4 3XSSC PC-1 A18 7 1 7 5 AT1G29930 PC-1 E06 7 1 7 6 3XSSC PC-1 E18 7 1 7 7 AT3G44150 PC-1 I06 7 1 7 8 3XSSC PC-1 I18 7 1 7 9 AT4G00810 PC-1 M06 7 1 7 10 3XSSC PC-1 M18 7 1 7 11 At1g76230 expressed protein 7 1 7 12 At1g76290 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501 7 1 7 13 At1g76440 expressed protein 7 1 7 14 At1g76480 expressed protein ; expression supported by MPSS 7 1 7 15 At1g76640 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]" 7 1 7 16 At1g76705 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 7 1 7 17 At1g76860 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to SWISS-PROT:Q9Y4Z1 U6 snRNA-associated Sm-like protein LSm3 (MDS017) [Mouse]" 7 1 7 18 At1g76900 "F-box family protein / tubby family protein similar to Tubby protein (SP:P50586) {Mus musculus}; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein (GI:6730158) [Mus musculus]; similar to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:O00294) [Homo sapiens]; similar to phosphodiesterase (GI:467578) [Mus musculus]; contains Pfam profile: PF01167: Tub family; contains Pfam PF00646: F-box domain" 7 1 7 19 At1g79530 "glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative / NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, putative similar to glyceraldehyde-3-phosphate dehydrogenase [Pinus sylvestris] GI:1100223; contains Pfam profiles PF02800: Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain, PF00044: Glyceraldehyde 3-phosphate dehydrogenase NAD binding domain" 7 1 7 20 At1g79580 no apical meristem (NAM) family protein similar to OsNAC7 protein (GI:6730944) [Oryza sativa]; contains weak hit to Pfam PF02365 : No apical meristem (NAM) protein 7 1 7 21 At1g79720 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 7 1 7 22 At1g79780 "integral membrane protein, putative contains 1 transmembrane domain; contains plant integral membrane protein domain, TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 7 1 7 23 At1g79900 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 7 1 7 24 At1g79940 "DNAJ heat shock N-terminal domain-containing protein / sec63 domain-containing protein similar to SP|Q9UGP8 Translocation protein SEC63 homolog {Homo sapiens}; contains Pfam profiles PF00226 DnaJ domain, PF02889 Sec63 domain" 7 1 7 25 At1g80080 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 7 1 8 1 At1g80140 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase GI:7381227 from [Lycopersicon esculentum]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 7 1 8 2 At2g02980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 8 3 At2g03030 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 7 1 8 4 At2g03230 hypothetical protein 7 1 8 5 At2g03290 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 7 1 8 6 At2g03480 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase; non-consensus GA donor site at exon 4 7 1 8 7 At2g03530 F-box family protein-related similar to A3 protein (Swiss-Prot:Q41706)(unknown function) [Vigna unguiculata]; contains 9 transmembrane domains; supported by tandem duplication of F-box family protein (GI:3805763) (TIGR_Ath1:At2g07140) [Arabidopsis thaliana] 7 1 8 8 At2g03720 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 7 1 8 9 At2g03780 translin family protein similar to SP|Q99598 Translin-associated protein X (Translin-associated factor X) {Homo sapiens}; contains Pfam profile PF01997: Translin family 7 1 8 10 At2g07701 expressed protein 7 1 8 11 At2g07713 expressed protein 7 1 8 12 At2g07690 minichromosome maintenance family protein / MCM family protein similar to SP|P55862 DNA replication licensing factor MCM5 (CDC46 homolog) {Xenopus laevis}; contains Pfam profile PF00493: MCM2/3/5 family 7 1 8 13 At2g07880 hypothetical protein 7 1 8 14 At2g10175 hypothetical protein 7 1 8 15 At2g10380 hypothetical protein 7 1 8 16 At2g10940 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family 7 1 8 17 At2g10980 expressed protein 7 1 8 18 At2g16200 hypothetical protein 7 1 8 19 At2g16260 "glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from {Daucus carota} SP|Q03878, {Sinapis alba} SP|P49311, {Brassica napus} SP|Q05966, {Arabidopsis thaliana} SP|Q03251; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 7 1 8 20 At2g16460 expressed protein 7 1 8 21 At2g16490 XH domain-containing protein contains Pfam PF03469: XH domain 7 1 8 22 At2g16700 actin-depolymerizing factor 5 (ADF5) identical to SP|Q9ZNT3 Actin-depolymerizing factor 5 (ADF-5) (AtADF5) {Arabidopsis thaliana} 7 1 8 23 At2g16760 expressed protein 7 1 8 24 At2g16930 ribosomal protein L27 family protein contains Pfam profile PF01016: ribosomal protein L27 7 1 8 25 At2g16970 expressed protein ; expression supported by MPSS 7 1 9 1 At2g19770 profilin 4 (PRO4) (PFN4) identical to profilin 4 SP:Q38905 GI:1353768 from [Arabidopsis thaliana] 7 1 9 2 At2g19830 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 7 1 9 3 At2g20000 cell division cycle family protein / CDC family protein low similarity to SP|P30260|CC27_HUMAN Protein CDC27Hs (Cell division cycle protein 27 homolog) Homo sapiens; contains Pfam profile PF00515: TPR Domain 7 1 9 4 At2g20060 ribosomal protein L4 family protein contains Pfam profile PF00573: ribosomal protein L4/L1 family 7 1 9 5 At2g20230 expressed protein 7 1 9 6 At2g20290 "myosin, putative similar to myosin (GI:499047) [Arabidopsis thaliana]" 7 1 9 7 At2g20470 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 7 1 9 8 At2g20515 expressed protein 7 1 9 9 At2g23130 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 7 1 9 10 At2g23190 "cytochrome P450, putative Similar to Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];" 7 1 9 11 At2g23360 transport protein-related contains Pfam PF05911: Plant protein of unknown function (DUF869) profile; weak similarity to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] 7 1 9 12 At2g23420 nicotinate phosphoribosyltransferase family protein / NAPRTase family protein contains Pfam domain PF04095: Nicotinate phosphoribosyltransferase (NAPRTase) 7 1 9 13 At2g23590 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 1 9 14 At2g23660 LOB domain family protein / lateral organ boundaries domain family protein (LBD10) identical to SP|O64836 Putative LOB domain protein 10 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 7 1 9 15 At2g23820 metal-dependent phosphohydrolase HD domain-containing protein contains Pfam profile PF01966: HD domain 7 1 9 16 At2g23920 hypothetical protein 7 1 9 17 At2g26760 "cyclin, putative similar to CYCB1-1 protein [Petunia x hybrida] GI:6093215, B-type cyclin [Nicotiana tabacum] GI:849074; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 7 1 9 18 At2g26800 "hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative similar to SP|P35915 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA lyase) {Gallus gallus}; contains Pfam profile PF00682: HMGL-like" 7 1 9 19 At2g26960 "myb family transcription factor (MYB81) contains PFAM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB81) mRNA, partial cds GI:3941513" 7 1 9 20 At2g27000 cytochrome P450 family protein 7 1 9 21 At2g27130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 1 9 22 At2g27190 iron(III)-zinc(II) purple acid phosphatase (PAP12) identical to iron(III)-zinc(II) purple acid phosphatase [precursor] SP:Q38924 from [Arabidopsis thaliana] 7 1 9 23 At2g27330 RNA recognition motif (RRM)-containing protein 7 1 9 24 At2g27380 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 7 1 9 25 At2g30110 ubiquitin activating enzyme 1 (UBA1) E1; identical to GB:U80808 7 1 10 1 At2g30160 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 7 1 10 2 At2g30340 LOB domain protein 13 / lateral organ boundaries domain protein 13 (LBD13) identical to LOB DOMAIN 13 [Arabidopsis thaliana] GI:17227158 SP|Q9AT61 7 1 10 3 At2g30380 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641); expression supported by MPSS 7 1 10 4 At2g30540 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 7 1 10 5 At2g30580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 1 10 6 At2g30710 RabGAP/TBC domain-containing protein similar to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 7 1 10 7 At2g30770 "cytochrome P450 71A13, putative (CYP71A13) Identical to Cytochrome P450 71A13 (SP:O49342) [Arabidopsis thaliana]; similar to Cytochrome P450 (gi:5713172) [Nicotiana tabacum]." 7 1 10 8 At2g33385 "actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family low similarity to SP|O15144| ARP2/3 complex 34 kDa subunit (P34-ARC) (Actin-related protein 2/3 complex subunit 2) {Homo sapiens}; contains Pfam profile PF04045: Arp2/3 complex, 34 kD subunit p34-Arc" 7 1 10 9 At2g33435 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 7 1 10 10 At2g33580 "protein kinase family protein / peptidoglycan-binding LysM domain-containing protein protein kinase [Arabidopsis thaliana] GI:2852449; contains Pfam profiles PF01476: LysM domain, PF00069: Protein kinase domain" 7 1 10 11 At2g33630 3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent cholesterol dehydrogenase [Nocardia sp.] [GI:216809] 7 1 10 12 At2g33760 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 1 10 13 At2g33796 hypothetical protein 7 1 10 14 At2g34010 expressed protein 7 1 10 15 At2g34050 expressed protein contains Pfam PS00030: Eukaryotic putative RNA-binding region RNP-1 signature 7 1 10 16 At2g36670 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 7 1 10 17 At2g36695 expressed protein 7 1 10 18 At2g36870 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to cellulase (xyloglucan endo-transglycosylase) GI:311835 from [Tropaeolum majus]" 7 1 10 19 At2g36895 expressed protein 7 1 10 20 At2g37040 phenylalanine ammonia-lyase 1 (PAL1) nearly identical to SP|P35510 7 1 10 21 At2g37080 myosin heavy chain-related low similarity to myosin heavy chain [Rana catesbeiana] GI:4249701 7 1 10 22 At2g37230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 10 23 At2g37290 "RabGAP/TBC domain-containing protein low similarity to Rab6 GTPase activating protein, GAPCenA [Homo sapiens] GI:12188746; contains Pfam profile PF00566: TBC domain" 7 1 10 24 At2g39890 proline transporter 1 (ProT1) identical to proline transporter 1 GI:1769901 from [Arabidopsis thaliana] 7 1 10 25 At2g39950 expressed protein 7 1 11 1 At2g40090 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 7 1 11 2 At2g40113 hypothetical protein 7 1 11 3 At2g40250 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 7 1 11 4 At2g40310 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)(Galacturan 1,4-alpha-galacturonidase)" 7 1 11 5 At2g40440 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; 7 1 11 6 At2g40490 "uroporphyrinogen decarboxylase, putative / UPD, putative similar to uroporphyrinogen decarboxylase (chloroplast) from Nicotiana tabacum [SP|Q42967], Hordeum vulgare [SP|Q42855], Zea mays [SP|O81220]; contains Pfam domain uroporphyrinogen decarboxylase (URO-D) PF01208" 7 1 11 7 At2g43050 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 7 1 11 8 At2g43110 expressed protein 7 1 11 9 At2g43250 expressed protein and genefinder 7 1 11 10 At2g43310 expressed protein 7 1 11 11 At2g43490 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 7 1 11 12 At2g43540 expressed protein 7 1 11 13 At2g43700 lectin protein kinase family protein contains pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain 7 1 11 14 At2g43750 "cysteine synthase, chloroplast / O-acetylserine (thiol)-lyase / O-acetylserine sulfhydrylase / cpACS1 (OASB) identical to SP|P47999 Cysteine synthase, chloroplast precursor (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (cpACS1) {Arabidopsis thaliana}; identical to cDNA O-acetylserine lyase (At.OAS.7-4) GI:6983575" 7 1 11 15 At2g46390 expressed protein 7 1 11 16 At2g46450 "cyclic nucleotide-regulated ion channel, putative (CNGC12) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc3) GI:4581201 from [Arabidopsis thaliana]" 7 1 11 17 At2g46590 Dof zinc finger protein DAG2 / Dof affecting germination 2 (DAG2) identical to SP|Q9ZPY0 DOF zinc finger protein DAG2 (Dof affecting germination 2) {Arabidopsis thaliana} 7 1 11 18 At2g46640 hypothetical protein and genefinder; expression supported by MPSS 7 1 11 19 At2g46800 "zinc transporter (ZAT) identical to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 7 1 11 20 At2g46850 expressed protein 7 1 11 21 At2g46990 auxin-responsive protein / indoleacetic acid-induced protein 20 (IAA20) identical to SP|O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana} 7 1 11 22 At2g47050 invertase/pectin methylesterase inhibitor family protein low similarity to pollen-specific pectin esterase [Brassica rapa subsp. pekinensis] GI:1620652; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 1 11 23 At3g02360 "6-phosphogluconate dehydrogenase family protein contains Pfam profiles: PF00393 6-phosphogluconate dehydrogenase C-terminal domain, PF03446 NAD binding domain of 6-phosphogluconate ;similar to 6-phosphogluconate dehydrogenase GB:BAA22812 GI:2529229 [Glycine max]" 7 1 11 24 At3g02420 expressed protein 7 1 11 25 At3g02560 40S ribosomal protein S7 (RPS7B) similar to ribosomal protein S7 GB:AAD26256 from [Secale cereale] 7 1 12 1 At3g02600 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase [Mus musculus] GI:1487873; contains Pfam profile: PF01569 phosphatase PAP2 superfamily 7 1 12 2 At3g02780 isopentenyl-diphosphate delta-isomerase II / isopentenyl diphosphate:dimethylallyl diphosphate isomerase II (IPP2) identical to isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP2) GB:U49259 [Arabidopsis thaliana] 7 1 12 3 At3g02840 immediate-early fungal elicitor family protein similar to immediate-early fungal elicitor protein CMPG1 (GI:14582200) [Petroselinum crispum] 7 1 12 4 At3g02990 heat shock factor protein 2 (HSF2) / heat shock transcription factor 2 (HSTF2) identical to heat shock transcription factor 2 (HSF2) SP:Q96320 from [Arabidopsis thaliana]; contains Pfam profile: PF00447 HSF-type DNA-binding domain 7 1 12 5 At3g03050 "cellulose synthase family protein (CslD3) similar to cellulose synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-7 (gi:9622886) from Zea mays; contains Pfam profile PF03552: Cellulose synthase" 7 1 12 6 At3g05670 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 7 1 12 7 At3g05690 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 7 1 12 8 At3g05840 shaggy-related protein kinase gamma / ASK-gamma (ASK3) identical to shaggy-related protein kinase gamma SP:P43289 GI:456509 from [Arabidopsis thaliana] 7 1 12 9 At3g05900 neurofilament protein-related similar to NF-180 (GI:632549) [Petromyzon marinus] similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) [Homo sapiens] 7 1 12 10 At3g06040 "ribosomal protein L12 family protein contains similarity to 50S ribosomal protein L12-C, chloroplast precursor GB:P36212 from [Arabidopsis thaliana]" 7 1 12 11 At3g06080 expressed protein identical to unknown protein GB:AAF30301 from [Arabidopsis thaliana] 7 1 12 12 At3g06210 expressed protein contains Prosite PS00616: Histidine acid phosphatases phosphohistidine signature; 7 1 12 13 At3g06270 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase-2C (PP2C) GB:AAC36699 [Mesembryanthemum crystallinum]; contains Pfam profile: PF00481 protein phosphatase 2C" 7 1 12 14 At3g09200 60S acidic ribosomal protein P0 (RPP0B) similar to putative 60S acidic ribosomal protein P0 GB:P50346 [Glycine max] 7 1 12 15 At3g09260 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; almost identical to beta-glucosidase GI:1732570 from [Arabidopsis thaliana]; similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis thaliana] 7 1 12 16 At3g09430 hypothetical protein 7 1 12 17 At3g09490 "chloroplast lumen common family protein 2 TPR domains; similar to chloroplast lumen proteins [GI:4056493 (F3G5.19)(At2g37400)] and [GI:7413648 (T22P11.180),(At5g02590)] [Arabidopsis thaliana]; +" 7 1 12 18 At3g09680 40S ribosomal protein S23 (RPS23A) similar to 40S ribosomal protein S23 (S12) GB:P46297 from [Fragaria x ananassa] 7 1 12 19 At3g09735 DNA-binding S1FA family protein contains Pfam profile: PF04689 DNA binding protein S1FA 7 1 12 20 At3g09870 "auxin-responsive family protein similar to auxin-induced proteins (SP:P33083), (SP:P33082) [Glycine max] and indole-3-acetic acid induced protein ARG7 (SP:P32295) from soybean [Vigna radiata]" 7 1 12 21 At3g09922 "hypothetical protein no ATG start, annotated according to PMID:11123795; IPS1 mRNA, complete sequence GI:8164007" 7 1 12 22 At3g12290 "tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P07245 C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" 7 1 12 23 At3g12350 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 7 1 12 24 At3g12530 DNA replication protein-related similar to DNA replication protein Psf2 (GI:29365481) [Xenopus laevis]; contains Pfam profile PF04128: Domain of unknown function (DUF392) 7 1 12 25 At3g12580 "heat shock protein 70, putative / HSP70, putative strong similarity to heat shock protein GI:425194 [Spinacia oleracea]" 7 1 13 1 At3g12740 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Similar to GI:4585976; GI:4966357; GI:4835763; GI:9757735 from [Arabidopsis thaliana] 7 1 13 2 At3g12800 "short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profile PF00106:oxidoreductase, short chain dehydrogenase/reductase family" 7 1 13 3 At3g12970 expressed protein 7 1 13 4 At3g13030 "hAT dimerisation domain-containing protein contains Pfam profile: PF04937 domain of unknown function (DUF659), weak hit to PF05699 hAT family dimerisation domain" 7 1 13 5 At3g15358 expressed protein 7 1 13 6 At3g15370 "expansin, putative (EXP12) similar to expansin GI:11191999 from [Lycopersicon esculentum]; alpha-expansin gene family, PMID:11641069" 7 1 13 7 At3g15530 expressed protein 7 1 13 8 At3g15580 "autophagy 8i (APG8i) identical to autophagy 8i [Arabidopsis thaliana] GI:19912167; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3; supporting cDNA gi|21636957|gb|AF492760.1|" 7 1 13 9 At3g15730 phospholipase D alpha 1 / PLD alpha 1 (PLDALPHA1) (PLD1) / choline phosphatase 1 identical to SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) [Arabidopsis thaliana] 7 1 13 10 At3g15790 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 7 1 13 11 At3g15950 DNA topoisomerase-related similar to DNA topoisomerase IV subunit A (GI:26454107) [Mycoplasma penetrans] 7 1 13 12 At3g15990 "sulfate transporter, putative similar to sulfate transporter [Arabidopsis thaliana] GI:2285885; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain" 7 1 13 13 At3g18670 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 7 1 13 14 At3g18710 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 7 1 13 15 At3g18860 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] 7 1 13 16 At3g18900 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547; contains TIGRFAM TIGR01640: F-box protein interaction domain" 7 1 13 17 At3g19055 hypothetical protein 7 1 13 18 At3g19120 expressed protein 7 1 13 19 At3g19280 "glycoprotein 3-alpha-L-fucosyltransferase A / FucTA / core alpha-(1,3)-fucosyltransferase (FUT11) identical to Glycoprotein 3-alpha-L-fucosyltransferase A (Core alpha-(1,3)-fucosyltransferase)(Fuc-T C3) (FucTA) (FucT1) (AtFUT11)(SP:Q9LJK1) from [Arabidopsis thaliana]; contains Pfam profile PF00852: Fucosyl transferase; identical to cDNA alpha1,3-fucosyltransferase (FucTA) GI:13992482" 7 1 13 20 At3g19330 polyadenylate-binding protein-related / PABP-related similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana]; similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) (Swiss-Prot:P42731) [Arabidopsis thaliana] 7 1 13 21 At3g22030 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function; weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris] 7 1 13 22 At3g22090 expressed protein 7 1 13 23 At3g22260 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 7 1 13 24 At3g22310 "DEAD box RNA helicase, putative (RH9) similar to RNA helicases GI:3775995, GI:3775987 [Arabidopsis thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 7 1 13 25 At3g22435 XS domain-containing protein contains Pfam profile PF03468: XS domain 7 1 14 1 At3g22480 "prefoldin-related KE2 family protein similar to Swiss-Prot:Q9UHV9 prefoldin subunit 2 (Protein HSPC231) [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 7 1 14 2 At3g22660 rRNA processing protein-related contains weak similarity to rRNA processing protein EBP2 (EBNA1-binding protein homolog) (Swiss-Prot:P36049) [Saccharomyces cerevisiae] 7 1 14 3 At3g22720 "F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 7 1 14 4 At3g25640 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 7 1 14 5 At3g25690 "hydroxyproline-rich glycoprotein family protein Common family members: At4g18570, At4g04980, At5g61090 [Arabidopsis thaliana]; identical to cDNA CHUP1 for actin binding protein GI:28071264" 7 1 14 6 At3g25840 protein kinase family protein contains Pfam profile: PF00069 eukaryotic protein kinase domain 7 1 14 7 At3g25882 NPR1/NIM1-interacting protein 2 (NIMIN-2) identical to cDNA NIMIN-2 protein (nimin-2 gene)GI:12057155 7 1 14 8 At3g26030 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 7 1 14 9 At3g26085 CAAX amino terminal protease family protein contains Pfam profile PF02517 CAAX amino terminal protease family protein 7 1 14 10 At3g26210 "cytochrome P450 71B23, putative (CYP71B23) Identical to Cytochrome P450 71B23 (SP:Q9LTM0)[Arabidopsis thaliana];contains Pfam profile: PF00067 cytochrome P450" 7 1 14 11 At3g26260 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 7 1 14 12 At3g28990 hypothetical protein 7 1 14 13 At3g29034 expressed protein 7 1 14 14 At3g29180 expressed protein 7 1 14 15 At3g29210 "hypothetical protein similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At5g34900, At2g02210, At3g32900" 7 1 14 16 At3g29350 two-component phosphorelay mediator 1 (HP1) identical to ATHP1 [Arabidopsis thaliana] GI:4156241 7 1 14 17 At3g29380 transcription factor IIB (TFIIB) family protein contains Pfam profile: PF00382 transcription factor TFIIB repeat 7 1 14 18 At3g29636 "transferase-related similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234" 7 1 14 19 At3g29690 "transferase-related similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234" 7 1 14 20 At3g43740 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana] gi|14573457|gb|AAK68073" 7 1 14 21 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 7 1 14 22 At3g43990 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 7 1 14 23 At3g44070 expressed protein ; expression supported by MPSS 7 1 14 24 At3g44220 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 7 1 14 25 At3g44280 expressed protein 7 1 15 1 At3g44490 histone deacetylase-related / HD-related similar to SP|O09106 Histone deacetylase 1 (HD1) {Mus musculus} 7 1 15 2 At3g44550 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 7 1 15 3 At3g47420 "glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative similar to cAMP inducible 2 protein [Mus musculus] GI:4580997, glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982; contains Pfam profile PF00083: major facilitator superfamily protein" 7 1 15 4 At3g47460 "SMC2-like condensin, putative similar to SMC2-like condensin (TITAN3) [Arabidopsis thaliana] GI:14279543; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain" 7 1 15 5 At3g47600 myb family transcription factor (MYB94) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB94) GI:3941527 7 1 15 6 At3g47660 regulator of chromosome condensation (RCC1) family protein contains Pfam domain PF00415: Regulator of chromosome condensation (RCC1) 7 1 15 7 At3g47820 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 7 1 15 8 At3g47860 apolipoprotein D-related contains weak similarity to Apolipoprotein D precursor (ApoD) (Swiss-Prot:P51910) [Mus musculus] 7 1 15 9 At3g48050 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 7 1 15 10 At3g48090 disease resistance protein (EDS1) identical to disease resistance protein/lipase homolog EDS1 GI:4454567; contains Pfam profile PF01764: Lipase 7 1 15 11 At3g50980 "dehydrin, putative similar to dehydrin Xero 1 [Arabidopsis thaliana] SWISS-PROT:P25863" 7 1 15 12 At3g51040 expressed protein contains Pfam PF05608: Protein of unknown function (DUF778) 7 1 15 13 At3g51200 auxin-responsive family protein similar to auxin-induced protein TGSAUR12 (GI:10185816) [Tulipa gesneriana] 7 1 15 14 At3g51260 20S proteasome alpha subunit D (PAD1) 7 1 15 15 At3g51420 "strictosidine synthase family protein similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088" 7 1 15 16 At3g51480 "glutamate receptor family protein (GLR3.6) plant glutamate receptor family, PMID:11379626" 7 1 15 17 At3g51640 expressed protein 7 1 15 18 At3g51700 expressed protein 7 1 15 19 At3g54170 FKBP12 interacting protein (FIP37) identical to FKBP12 interacting protein (FIP37) GI:3859944 from [Arabidopsis thaliana] 7 1 15 20 At3g54230 "zinc finger protein-related / D111/G-patch domain-containing protein / RNA recognition motif (RRM)-containing protein KIAA0122 gene , Homo sapiens, EMBL:HSDKG02; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF01585: G-patch domain, weak hit to PF00641: Zn-finger in Ran binding protein and others" 7 1 15 21 At3g54400 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 7 1 15 22 At3g54460 "SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein similar to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00646: F-box domain" 7 1 15 23 At3g54610 "histone acetyltransferase (GCN5) nearly identical to histone acetyltransferase GCN5 [Arabidopsis thaliana] GI:13591696; contains Pfam profiles PF00583: acetyltransferase, GNAT family, PF00439: Bromodomain" 7 1 15 24 At3g54670 "structural maintenance of chromosomes (SMC) family protein similar to SMC1 protein [Bos taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC protein) [Xenopus laevis] GI:3328231; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain" 7 1 15 25 At3g54840 Rab GTPase (ARA6) identical to small GTPase Ara6 [Arabidopsis thaliana] GI:13160603 7 1 16 1 At3g54890 chlorophyll A-B binding protein / LHCI type I (CAB) identical to chlorophyll A/B-binding protein [Arabidopsis thaliana] GI:16207; contains Pfam profile: PF00504 chlorophyll A-B binding protein 7 1 16 2 At3g57670 "zinc finger (C2H2 type) protein (WIP2) identical to WIP2 protein [Arabidopsis thaliana] gi|18027012|gb|AAL55722; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 7 1 16 3 At3g57730 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 7 1 16 4 At3g57880 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 7 1 16 5 At3g57940 expressed protein contains Pfam profile PF05127: Putative ATPase (DUF699) 7 1 16 6 At3g58130 "N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related similar to SP|Q9Y2B2 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (EC 3.5.1.-) (Phosphatidylinositol-glycan biosynthesis, class L protein) (PIG-L) {Homo sapiens}" 7 1 16 7 At3g58190 LOB domain protein 29 / lateral organ boundaries domain protein 29 (LBD29) identical to SP|Q9M2J7 LOB domain protein 29 {Arabidopsis thaliana}; supported by full-length cDNA gi:17227167 7 1 16 8 At3g58370 K-Cl Co-transporter type 1 protein-related / KCC1 protein-related contains weak hit to Pfam profile PF03522: K-Cl Co-transporter type 1 (KCC1) 7 1 16 9 At3g58430 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains weak hit to Pfam PF00917: MATH domain 7 1 16 10 At3g61160 shaggy-related protein kinase beta / ASK-beta (ASK2) identical to shaggy-related protein kinase beta SP:O23145 GI:2569931 from [Arabidopsis thaliana] 7 1 16 11 At3g61210 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 7 1 16 12 At3g61380 expressed protein 7 1 16 13 At3g61415 "SKP1 family protein low similarity to SP|P52285 Glycoprotein FP21 precursor {Dictyostelium discoideum}; contains Pfam profile PF01466: Skp1 family, dimerisation domain" 7 1 16 14 At3g61580 delta-8 sphingolipid desaturase (SLD1) identical to delta-8 sphingolipid desaturase GI:3819710 from [Arabidopsis thaliana]; contains Pfam profile PF00487: Fatty acid desaturase; contains Pfam profile PF00173: Heme/Steroid binding domain 7 1 16 15 At3g61630 "AP2 domain-containing transcription factor, putative transcription factor Pti6 - Lycopersicon esculentum, PIR:T07728" 7 1 16 16 At3g61790 seven in absentia (SINA) family protein similar to siah-1A protein [Mus musculus] GI:297035; contains Pfam profile PF03145: Seven in absentia protein family 7 1 16 17 At3g61850 Dof zinc finger protein DAG1 / Dof affecting germination 1 (DAG1) / transcription factor BBFa (BBFA) identical to SP|Q43385 DOF zinc finger protein DAG1 (Dof affecting germination 1) (Transcription factor BBFa) (AtBBFa) (rolB domain B factor a) {Arabidopsis thaliana} 7 1 16 18 At4g00790 expressed protein 7 1 16 19 At4g00830 RNA recognition motif (RRM)-containing protein similar to nucleolin protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 7 1 16 20 At4g00980 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 7 1 16 21 At4g01026 expressed protein 7 1 16 22 At4g01190 phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase 7 1 16 23 At4g01230 reticulon family protein (RTNLB7) weak similarity to SP|O95197 Reticulon protein 3 (Neuroendocrine-specific protein-like) {Homo sapiens}; contains Pfam profile PF02453: Reticulon 7 1 16 24 At4g01400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 16 25 At4g01440 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 7 1 17 1 At4g04200 expressed protein 7 1 17 2 At4g04330 expressed protein 7 1 17 3 At4g04500 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 7 1 17 4 At4g04570 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 7 1 17 5 At4g04745 expressed protein 7 1 17 6 At4g04800 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 7 1 17 7 At4g04955 amidohydrolase family protein similar to SP|P32375 Allantoinase (EC 3.5.2.5) {Saccharomyces cerevisiae}; contains Pfam profile PF01979: Amidohydrolase family 7 1 17 8 At4g05000 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 7 1 17 9 At4g09720 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB7A from [Lotus japonicus]" 7 1 17 10 At4g09760 "choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375" 7 1 17 11 At4g09940 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 (Arabidopsis thaliana); contains Pfam PF04548: AIG1 family; 7 1 17 12 At4g09970 expressed protein 7 1 17 13 At4g10110 RNA recognition motif (RRM)-containing protein contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 7 1 17 14 At4g10170 "synaptobrevin-related family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; vesicle-associated membrane protein 7B, Arabidopsis thaliana, AF025333" 7 1 17 15 At4g10320 "isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putative similar to SP|P41252 Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) (IRS) {Homo sapiens}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 7 1 17 16 At4g10380 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 7 1 17 17 At4g13195 expressed protein 7 1 17 18 At4g13240 hypothetical protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 7 1 17 19 At4g13350 human Rev interacting-like protein-related / hRIP protein-related similar to SP|P52594 Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein) {Homo sapiens}; contains Pfam profile PF01412: Putative GTPase activating protein for Arf 7 1 17 20 At4g13410 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 7 1 17 21 At4g13570 "histone H2A, putative similar to histone H2A.F/Z from Arabidopsis thaliana GI:2407800, histone H2A.F/Z Strongylocentrotus purpuratus SP|P08991, histone H2A variant Drosophila melanogaster SP|P08985; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 7 1 17 22 At4g13620 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] GI:2281633; contains Pfam profile PF00847: AP2 domain" 7 1 17 23 At4g13780 "methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative similar to methionyl-tRNA synthetase [Oryza sativa] GI:4091008; contains Pfam profiles PF00133: tRNA synthetases class I (I, L, M and V), PF01588: Putative tRNA binding domain" 7 1 17 24 At4g13830 "DNAJ heat shock N-terminal domain-containing protein (J20) identical to DnaJ-like protein [Arabidopsis thaliana] GI:6691127; similar to SP|Q05646 Chaperone protein dnaJ Erysipelothrix rhusiopathiae, J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain" 7 1 17 25 At4g16170 expressed protein 7 1 18 1 At4g16215 expressed protein 7 1 18 2 At4g16380 expressed protein 7 1 18 3 At4g16440 "iron hydrogenase family protein contains Pfam profiles: PF02906 Iron only hydrogenase large subunit, C-terminal domain, PF02256 Iron hydrogenase small subunit" 7 1 18 4 At4g16560 "heat shock protein-related contains similarity to SWISS-PROT:P31170 small heat shock protein, chloroplast precursor [Arabidopsis thaliana]" 7 1 18 5 At4g16600 "glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-1 from Rattus norvegicus [SP|O08730], Homo sapiens [GI:496895], Mus musculus [SP|Q9R062]" 7 1 18 6 At4g16730 terpene synthase/cyclase family protein similar to myrcene/ocimene synthase [GI:9957293]; contains Pfam profile: PF01397 terpene synthase family 7 1 18 7 At4g16765 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|P40902 isp7 from Schizosaccharomyces pombe, GI:475959 flavanone-3-hydroxylase (naringenin 3-dioxygenase) from Medicago sativa, GI:1944197 flavanone 3-hydroxylase from Perilla frutescens; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 7 1 18 8 At4g19305 hypothetical protein 7 1 18 9 At4g19360 expressed protein 7 1 18 10 At4g19520 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 1 18 11 At4g19580 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 7 1 18 12 At4g19720 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 7 1 18 13 At4g19800 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 7 1 18 14 At4g19960 "potassium transporter family protein similar to potassium transporter [Arabidopsis thaliana] gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 7 1 18 15 At4g20010 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) 7 1 18 16 At4g22810 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 7 1 18 17 At4g22860 expressed protein 7 1 18 18 At4g23010 UDP-galactose transporter-related contains weak similarity to UDP-galactose transporter related isozyme 1 (GI:1669562) [Mus musculus] 7 1 18 19 At4g23070 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 7 1 18 20 At4g23220 protein kinase family protein contains Pfam PF00069: Protein kinase domain 7 1 18 21 At4g23280 "protein kinase, putative similar to receptor-like protein kinase 4 (gi:13506745), 5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis thaliana; contains Pfam protein kinase domain PF00069" 7 1 18 22 At4g23440 expressed protein 7 1 18 23 At4g23490 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 7 1 18 24 At4g26070 "mitogen-activated protein kinase kinase (MAPKK) (MKK1) (MEK1) identical to MEK1 [Arabidopsis thaliana] gi|2196704|gb|AAB97145; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 7 1 18 25 At4g26100 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 7 1 19 1 At4g26240 expressed protein 7 1 19 2 At4g26300 "arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative similar to SP|P37880 Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS) {Cricetulus longicaudatus}; contains Pfam profiles PF00750: arginyl-tRNA synthetase, PF03485: arginyl-tRNA synthetase N-terminal domain" 7 1 19 3 At4g26450 expressed protein 7 1 19 4 At4g26510 uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) nearly identical to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana} 7 1 19 5 At4g26640 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 7 1 19 6 At4g26690 glycerophosphoryl diester phosphodiesterase family protein weak similarity to glycerophosphodiester phosphodiesterase [Borrelia hermsii] GI:1399038; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 7 1 19 7 At4g29270 acid phosphatase class B family protein similar to acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 7 1 19 8 At4g29330 Der1-like family protein / degradation in the ER-like family protein contains Pfam profile: PF04511 Der1-like family 7 1 19 9 At4g29490 "Xaa-Pro dipeptidase, putative / prolidase, putative / imidodipeptidase, putative similar to SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase) {Homo sapiens}; contains Pfam profiles PF00557: metallopeptidase family M24, PF05195: Aminopeptidase P, N-terminal domain" 7 1 19 10 At4g29550 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 7 1 19 11 At4g29710 phosphodiesterase/nucleotide pyrophosphatase-related weak similarity to SP|Q13822 Ectonucleotide pyrophosphatase/phosphodiesterase 2 {Homo sapiens} 7 1 19 12 At4g29750 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 7 1 19 13 At4g29905 expressed protein 7 1 19 14 At4g29960 expressed protein 7 1 19 15 At4g32470 "ubiquinol-cytochrome C reductase complex 14 kDa protein, putative similar to SP|P48502 Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam profile PF02271: Ubiquinol-cytochrome C reductase complex 14kD subunit" 7 1 19 16 At4g32520 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 7 1 19 17 At4g32650 "inward rectifying potassium channel, putative (KAT3) (AKT4) (KC1) identical to K+ inward rectifying channel protein KC1 [Arabidopsis thaliana] gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel [Arabidopsis thaliana] gi|1165000|emb|CAA63601; Shaker-type channel (1P/6TM), PMID:11500563" 7 1 19 18 At4g32700 "DNA-directed DNA polymerase family protein similar to DNA helicase HEL308 [Homo sapiens] GI:19110782; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00476: DNA polymerase family A" 7 1 19 19 At4g32860 expressed protein 7 1 19 20 At4g32900 expressed protein 7 1 19 21 At4g33050 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 7 1 19 22 At4g33110 "coclaurine N-methyltransferase, putative similar to coclaurine N-methyltransferase [Coptis japonica] GI:16754879; contains Pfam profile PF02353: Cyclopropane-fatty-acyl-phospholipid synthase" 7 1 19 23 AT5G57480 PC-1 A06 7 1 19 24 3XSSC PC-1 A18 7 1 19 25 AT1G29930 PC-1 E06 7 1 20 1 3XSSC PC-1 E18 7 1 20 2 AT3G44150 PC-1 I06 7 1 20 3 3XSSC PC-1 I18 7 1 20 4 AT4G00810 PC-1 M06 7 1 20 5 3XSSC PC-1 M18 7 1 20 6 At4g35720 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 7 1 20 7 At4g35770 senescence-associated protein (SEN1) identical to senescence-associated protein GI:1046270 from [Arabidopsis thaliana] 7 1 20 8 At4g35905 expressed protein contains Pfam domain PF03966: Protein of unknown function (DUF343) 7 1 20 9 At4g35950 Rac-like GTP-binding protein (ARAC6) identical to rac-like GTP binding protein Arac6 GI:3406757 from [Arabidopsis thaliana] 7 1 20 10 At4g36080 "FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein contains Pfam profiles PF00454: Phosphatidylinositol 3- and 4-kinase, PF02259: FAT domain, PF02260: FATC domain" 7 1 20 11 At4g36130 "60S ribosomal protein L8 (RPL8C) ribosomal protein L8, cytosolic, tomato, PIR1:R5TOL8" 7 1 20 12 At4g36350 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 7 1 20 13 At4g36390 "radical SAM domain-containing protein / TRAM domain-containing protein similar to CDK5 activator-binding protein [Rattus norvegicus] GI:7330738; contains Pfam profiles PF00919: UPF0004 family protein, PF01938: TRAM domain, PF04055: radical SAM domain protein" 7 1 20 14 At4g39040 expressed protein contains PF01985: Uncharacterised protein family 7 1 20 15 At4g39080 "vacuolar proton ATPase, putative similar to Swiss-Prot:Q93050 vacuolar proton translocating ATPase 116 kDa subunit A isoform 1 (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit, Vacuolar proton pump subunit 1, Vacuolar adenosine triphosphatase subunit Ac116) [Homo sapiens]" 7 1 20 16 At4g39250 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 7 1 20 17 At4g39270 "leucine-rich repeat transmembrane protein kinase, putative receptor protein kinase erecta, Arabidopsis thaliana" 7 1 20 18 At4g39390 transporter-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593 7 1 20 19 At4g39440 expressed protein ; expression supported by MPSS 7 1 20 20 At4g39600 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 1 20 21 At4g39660 "alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative similar to SP|Q64565 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate aminotransferase) {Rattus norvegicus}; contains Pfam profile PF00202: aminotransferase, class III" 7 1 20 22 At5g03160 "DNAJ heat shock N-terminal domain-containing protein similar to P58 protein, Bos primigenius taurus, PIR:A56534; similar to p58 (GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ domain; contains Pfam PF00515: TPR Domain" 7 1 20 23 At5g03220 transcriptional co-activator-related contains weak similarity to Cofactor required for Sp1 transcriptional activation subunit 9 (Transcriptional co-activator CRSP33) (RNA polymerase transcriptional regulation mediator subunit 7 homolog) (hMED7) (Activator-recruited cofactor 34 kDa component) (ARC34) (Swiss-Prot:O43513) [Homo sapiens] 7 1 20 24 At5g03390 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 7 1 20 25 At5g03440 expressed protein 7 1 21 1 At5g03570 iron-responsive transporter-related similar to iron-regulated transporter IREG1 [Mus musculus] GI:7264727 7 1 21 2 At5g03630 "monodehydroascorbate reductase, putative monodehydroascorbate reductase (NADH), cucumber, PIR:JU0182" 7 1 21 3 At5g03810 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 7 1 21 4 At5g03870 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 7 1 21 5 At5g06460 ubiquitin activating enzyme 2 (UBA2) E1; identical to gi:1703477 7 1 21 6 At5g06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam profile: PF01805 surp module 7 1 21 7 At5g06680 tubulin family protein similar to SP|Q96CW5 Gamma-tubulin complex component 3 {Homo sapiens} 7 1 21 8 At5g06730 "peroxidase, putative similar to peroxidase [Arabidopsis thaliana] gi|1491617|emb|CAA68212" 7 1 21 9 At5g06905 cytochrome P450 family protein similar to SP|Q42798|C931_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) {Glycine max}; contains Pfam profile PF00067: Cytochrome P450 7 1 21 10 At5g06960 bZIP family transcription factor (OBF5) identical to bZIP family transcription factor (OBF5) GI:414615 from [Arabidopsis thaliana] 7 1 21 11 At5g07100 "WRKY family transcription factor SPF1 protein - Ipomoea batatas (sweet potato), PIR:S51529" 7 1 21 12 At5g07160 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 7 1 21 13 At5g10260 "Ras-related GTP-binding protein, putative similar to Ras-related protein Rab-6A SP:P20340 from [Homo sapiens]" 7 1 21 14 At5g10320 expressed protein 7 1 21 15 At5g10480 "protein tyrosine phosphatase-like protein, putative (PAS2) identical to PEPINO/PASTICCINO2 protein GI:24411193, GI:24575153 from [Arabidopsis thaliana]; contains Pfam:04387: protein tyrosine phosphatase-like protein" 7 1 21 16 At5g10540 peptidase M3 family protein / thimet oligopeptidase family protein similar to SP|P27237 Oligopeptidase A (EC 3.4.24.70) {Salmonella typhimurium}; contains Pfam profile PF01432: Peptidase family M3 7 1 21 17 At5g10695 expressed protein 7 1 21 18 At5g10730 expressed protein 7 1 21 19 At5g10900 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 7 1 21 20 At5g10960 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Homo sapiens]" 7 1 21 21 At5g14080 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 21 22 At5g14130 "peroxidase, putative identical to peroxidase ATP20a [Arabidopsis thaliana] gi|1546694|emb|CAA67338" 7 1 21 23 At5g14310 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 7 1 21 24 At5g14370 expressed protein 7 1 21 25 At5g14550 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 7 1 22 1 At5g14570 "transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362; contains Pfam profile PF00083: Sugar (and other) transporter" 7 1 22 2 At5g14750 "myb family transcription factor (MYB66) / werewolf (WER) contains PFAM profile: Myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB66) mRNA, partial cds GI:3941491; identical to GP:9755743 myb transcription factor werewolf (WER)/ MYB66 {Arabidopsis thaliana}" 7 1 22 3 At5g14820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 22 4 At5g17510 expressed protein 7 1 22 5 At5g17550 peroxisomal protein PEX19 family protein contains Pfam profile: PF04614 Pex19 protein family 7 1 22 6 At5g17710 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform a [Chlamydomonas reinhardtii] GI:15384277; contains Pfam profile PF01025: co-chaperone GrpE 7 1 22 7 At5g17760 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 7 1 22 8 At5g17930 MA3 domain-containing protein low similarity to SP|Q9P6R9 Cell cycle control protein cwf22 {Schizosaccharomyces pombe}; contains Pfam profile PF02847: MA3 domain 7 1 22 9 At5g18000 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 7 1 22 10 At5g18150 expressed protein similar to unknown protein (emb|CAB87627.1) 7 1 22 11 At5g18210 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain type dehydrogenase/reductase SP:Q08632 [Picea abies] 7 1 22 12 At5g20760 hypothetical protein 7 1 22 13 At5g20840 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to cDNA SAC domain protein 4 (SAC4) GI:31415724" 7 1 22 14 At5g20980 "5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent" 7 1 22 15 At5g21050 expressed protein 7 1 22 16 At5g21430 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile: PF00226 DnaJ domain; 7 1 22 17 At5g21940 expressed protein supported by full length cDNA GI:22531282 from [Arabidopsis thaliana] 7 1 22 18 At5g22080 DNAJ heat shock N-terminal domain-containing protein similar to J-domain protein Jiv [Bos taurus] GI:15777193; contains Pfam profile PF00226 DnaJ domain 7 1 22 19 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 7 1 22 20 At5g24760 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase from Solanum tuberosum [SP|p14673]; contains Pfam zinc-binding dehydrogenase domain PF00107" 7 1 22 21 At5g24820 "aspartyl protease family protein low similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 7 1 22 22 At5g24990 expressed protein 7 1 22 23 At5g25050 integral membrane transporter family protein similar to biopterin transporter (GI:3377706) [Leishmania mexicana]; contains 7 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter 7 1 22 24 At5g25230 "elongation factor Tu family protein translation Elongation Factor 2, Schizosaccharomyces pombe, PIR:T39902" 7 1 22 25 At5g25280 serine-rich protein-related contains some similarity to serine-rich proteins 7 1 23 1 At5g25420 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 7 1 23 2 At5g25470 expressed protein 7 1 23 3 At5g28450 "chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putative strong similarity to SP|P13869 Chlorophyll A-B binding protein, chloroplast precursor (LHCI type II CAB) {Petunia hybrida}; contains Pfam profile: PF00504 chlorophyll A-B binding protein" 7 1 23 4 At5g28484 hypothetical protein 7 1 23 5 At5g28646 wave-dampened2 (WVD2) nearly identical to WAVE-DAMPENED2 [Arabidopsis thaliana] GI:28453880 7 1 23 6 At5g28730 hypothetical protein 7 1 23 7 At5g28885 hypothetical protein 7 1 23 8 At5g28940 hypothetical protein 7 1 23 9 At5g30341 hypothetical protein 7 1 23 10 At5g32169 hypothetical protein 7 1 23 11 At5g37470 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 7 1 23 12 At5g37510 "NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644]" 7 1 23 13 At5g37670 "15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) contains Pfam profile: PF00011 Hsp20/alpha crystallin family; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 7 1 23 14 At5g37740 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 7 1 23 15 At5g37920 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430 contains Pfam PF04510 : Family of unknown function (DUF577)" 7 1 23 16 At5g37980 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 7 1 23 17 At5g38150 expressed protein 7 1 23 18 At5g38200 expressed protein 7 1 23 19 At5g41070 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 7 1 23 20 At5g41100 expressed protein 7 1 23 21 At5g41280 hypothetical protein contains Pfam profile: PF01657 domain of unknown function 7 1 23 22 At5g41330 potassium channel tetramerisation domain-containing protein contains Pfam profile PF02214: K+ channel tetramerisation domain 7 1 23 23 At5g41510 F-box family protein contains Pfam:PF00646 F-box domain 7 1 23 24 At5g41570 WRKY family transcription factor identical to WRKY transcription factor 24 (WRKY24) GI:15384230 from [Arabidopsis thaliana] 7 1 23 25 At5g41700 "ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131" 7 1 24 1 At5g41765 hypothetical protein 7 1 24 2 At5g44415 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 7 1 24 3 At5g44470 hypothetical protein 7 1 24 4 At5g44630 terpene synthase/cyclase family protein 7 1 24 5 At5g44680 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 7 1 24 6 At5g44800 "chromodomain-helicase-DNA-binding family protein / CHD family protein similar to chromatin remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana] GI:6478518; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo' (CHRromatin Organization MOdifier)" 7 1 24 7 At5g44870 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 1 24 8 At5g45030 expressed protein 7 1 24 9 At5g45090 lectin-related low similarity to PP2 lectin polypeptide [Cucurbita maxima] GI:410437; contains Pfam profile PF01582: TIR domain 7 1 24 10 At5g47610 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 1 24 11 At5g47660 DNA-binding protein-related similar to GTL1 [Arabidopsis thaliana] GI:2664198 7 1 24 12 At5g47820 kinesin-like protein (FRA1) identical to kinesin-like protein [Arabidopsis thaliana] GI:27260890; contains Pfam profile PF00225: Kinesin motor domain 7 1 24 13 At5g47860 expressed protein 7 1 24 14 At5g48040 hypothetical protein 7 1 24 15 At5g48100 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661197] 7 1 24 16 At5g48270 hypothetical protein 7 1 24 17 At5g48330 regulator of chromosome condensation (RCC1) family protein contains Pfam PF00415:Regulator of chromosome condensation (RCC1) domain (5 copies); similar to UVB-resistance protein UVR8 (GI:5478530) {Arabidopsis thaliana) 7 1 24 18 At5g51000 F-box family protein contains F-box domain Pfam:PF00646 7 1 24 19 At5g51060 respiratory burst oxidase protein C (RbohC) / NADPH oxidase nearly identical to respiratory burst oxidase protein C from Arabidopsis thaliana [gi:3242785] 7 1 24 20 At5g51200 expressed protein 7 1 24 21 At5g51250 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 1 24 22 At5g51410 LUC7 N_terminus domain-containing protein similar to cisplatin resistance-associated overexpressed protein [Homo sapiens] GI:6899846; contains Pfam profile PF03194: LUC7 N_terminus 7 1 24 23 At5g51470 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 7 1 24 24 At5g51630 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 1 24 25 At5g51670 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668) 7 1 25 1 At5g54420 hypothetical protein 7 1 25 2 At5g54480 hypothetical protein 7 1 25 3 At5g54610 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 7 1 25 4 At5g54670 kinesin-like protein C (KATC) 7 1 25 5 At5g54840 GTP-binding family protein similar to SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase spg1)(Sid3 protein) {Schizosaccharomyces pombe} 7 1 25 6 At5g54870 expressed protein strong similarity to unknown protein (pir||T04825) 7 1 25 7 At5g55010 hypothetical protein 7 1 25 8 At5g55070 "2-oxoacid dehydrogenase family protein similar to SP|Q01205 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) {Rattus norvegicus}; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme" 7 1 25 9 At5g57750 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 7 1 25 10 At5g57800 "CER1 protein, putative (WAX2) similar to maize glossy1 homolog GI:2213643 from [Oryza sativa]; contains Pfam profile PF01598: Sterol desaturase" 7 1 25 11 At5g57930 expressed protein 7 1 25 12 At5g57990 "ubiquitin-specific protease 23, putative (UBP23) identical to GI:11993486" 7 1 25 13 At5g58150 "leucine-rich repeat transmembrane protein kinase, putative " 7 1 25 14 At5g58210 hydroxyproline-rich glycoprotein family protein 7 1 25 15 At5g58340 expressed protein ; expression supported by MPSS 7 1 25 16 At5g58375 expressed protein 7 1 25 17 At5g60980 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein G3BP ras-GTPase-activating protein SH3-domain binding protein, Mus musculus, EMBL:MMU65313" 7 1 25 18 At5g61020 YT521-B-like family protein contains Pfam profile PF04146: YT521-B-like family 7 1 25 19 At5g61180 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 7 1 25 20 At5g61240 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 7 1 25 21 At5g61400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 1 25 22 At5g61440 thioredoxin family protein low similarity to thioredoxin [Callithrix jacchus] GI:13560979; contains Pfam profile: PF00085 Thioredoxin 7 1 25 23 At5g61580 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 7 1 25 24 At5g61630 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 7 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 7 1 26 1 At5g64390 KH domain-containing RNA-binding protein (HEN4) contains similarity to RNA-binding protein; identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404; contains Pfam domain PF00013: KH domain; identical to cDNA HEN4 (HEN4) GI:28261402 7 1 26 2 At5g64520 DNA repair protein-related contains weak similarity to DNA-repair protein XRCC2 (X-ray repair cross-complementing protein 2) (Swiss-Prot:O43543) [Homo sapiens] 7 1 26 3 At5g64560 "magnesium transporter CorA-like family protein (MRS2-2) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 7 1 26 4 At5g64700 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula]; contains Pfam profile PF00892: Integral membrane protein 7 1 26 5 At5g64750 "AP2 domain-containing transcription factor, putative contains similarity to transcription factor" 7 1 26 6 At5g64890 expressed protein 7 1 26 7 At5g64940 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 7 1 26 8 At5g67450 zinc finger (C2H2 type) protein 1 (AZF1) identical to Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] gi|6009887|dbj|BAA85108 7 1 26 9 At5g67500 "porin, putative similar to SP|P42055 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) {Solanum tuberosum}; contains Pfam profile PF01459: Eukaryotic porin" 7 1 26 10 At1g25083 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana); similar to ESTs dbj|AV540153.1, dbj|AV557490.1, gb|AI997696.1, gb|AW004516.1, dbj|AV521371.1" 7 1 26 11 At1g59077 hypothetical protein 7 1 26 12 ath-MIR166f miRNA gene Arabidopsis thaliana miR166f stem-loop 7 1 26 13 ath-MIR164c miRNA gene Arabidopsis thaliana miR164c stem-loop 7 1 26 14 ath-MIR166g miRNA gene Arabidopsis thaliana miR166g stem-loop 7 1 26 15 ath-MIR319a miRNA gene Arabidopsis thaliana miR319a stem-loop 7 1 26 16 At3g43740 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana] gi|14573457|gb|AAK68073" 7 1 26 17 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 7 1 26 18 At3g43990 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 7 1 26 19 At3g44070 expressed protein ; expression supported by MPSS 7 1 26 20 At3g44220 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 7 1 26 21 At3g44280 expressed protein 7 1 26 22 At3g44490 histone deacetylase-related / HD-related similar to SP|O09106 Histone deacetylase 1 (HD1) {Mus musculus} 7 1 26 23 At3g44550 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 7 1 26 24 Blank Blank 7 1 26 25 Blank Blank 7 2 1 1 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 7 2 1 2 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 2 1 3 Alien2 Control: Stratagene Spotreport Alien Oligo 7 2 1 4 Alien8 Control: Stratagene Spotreport Alien Oligo 7 2 1 5 atc04 Randomly generated negative control 7 2 1 6 atc10 Randomly generated negative control 7 2 1 7 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 2 1 8 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 7 2 1 9 At1g02720 glycosyl transferase family 8 protein low similarity to putative glycosyl transferase from Neisseria gonorrhoeae [GI:595812]; contains Pfam glycosyl transferase family 8 domain PF01501 7 2 1 10 At1g02780 60S ribosomal protein L19 (RPL19A) similar to ribosomal protein L19 GI:36127 from [Homo sapiens] 7 2 1 11 At1g02880 "thiamin pyrophosphokinase, putative similar to thiamin pyrophosphokinase [Mus musculus] gi|6468206|dbj|BAA87040" 7 2 1 12 At1g02930 "glutathione S-transferase, putative similar to glutathione S-transferase GI:860955 from [Hyoscyamus muticus]" 7 2 1 13 At1g03040 "basic helix-loop-helix (bHLH) family protein component of the pyruvate dehydrogenase complex E3, contains PF|00010 helix-loop-helix DNA-binding domain. ESTs gb|T45640 and gb|T22783 come from this gene" 7 2 1 14 At1g03080 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 7 2 1 15 At1g03230 "extracellular dermal glycoprotein, putative / EDGP, putative similar to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741" 7 2 1 16 At1g03290 "expressed protein ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene" 7 2 1 17 At1g05960 expressed protein similar to hypothetical protein GB:AAF80120 GI:8810459 from [Arabidopsis thaliana ] 7 2 1 18 At1g06030 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 7 2 1 19 At1g06160 "ethylene-responsive factor, putative similar to ethylene response factor 1 GB:AAD03544 GI:4128208 from [Arabidopsis thaliana]" 7 2 1 20 At1g06200 expressed protein 7 2 1 21 At1g06390 shaggy-related protein kinase iota / ASK-iota (ASK9) (GSK1) identical to shaggy-related protein kinase iota (ASK-iota) [Arabidopsis thaliana] SWISS-PROT:Q39012 7 2 1 22 At1g06440 expressed protein 7 2 1 23 At1g06630 F-box family protein contains F-box domain Pfam:PF00646 7 2 1 24 At1g06660 expressed protein 7 2 1 25 At1g09160 protein phosphatase 2C-related / PP2C-related similar to GB:AAC16260 7 2 2 1 At1g09220 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 2 2 At1g09380 integral membrane family protein / nodulin MtN21-related similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 7 2 2 3 At1g09430 "ATP-citrate synthase (ATP-citrate (pro-S-)-lyase/citrate cleavage enzyme), putative similar to ATP-citrate-lyase (GI:16648642) [Arabidopsis thaliana]; similar to ATP-citrate (pro-S-)-lyase (EC 4.1.3.8) (Citrate cleavage enzyme)(SP:Q91V92) {Mus musculus}; Location of EST gb|Z34587" 7 2 2 4 At1g09575 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 7 2 2 5 At1g09630 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:1370146 from [Lotus japonicus]" 7 2 2 6 At1g09780 "2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative strong similarity to SP|Q42908 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) {Mesembryanthemum crystallinum}; contains Pfam profile PF01676: Metalloenzyme superfamily" 7 2 2 7 At1g09815 DNA polymerase delta subunit 4 family contains similarity to Swiss-Prot:Q9HCU8 DNA polymerase delta subunit 4 (DNA polymerase delta subunit p12) [Homo sapiens] 7 2 2 8 At1g12390 cornichon family protein contains Pfam profile: PF03311 cornichon protein 7 2 2 9 At1g12440 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 7 2 2 10 At1g12630 AP2 domain-containing protein similar to DREB1B GI:3738226 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain 7 2 2 11 At1g12700 "helicase domain-containing protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles PF01535: PPR repeat, PF00271: Helicase conserved C-terminal domain" 7 2 2 12 At1g12850 phosphoglycerate/bisphosphoglycerate mutase family protein similar to XY4 protein [Silene vulgaris] GI:21386788; contains Pfam profile PF00300: phosphoglycerate mutase family 7 2 2 13 At1g12910 "flower pigmentation protein (AN11) contains 3 WD-40 repeats (PF00400); identical to GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11 (11), 1422-1434 (1997))" 7 2 2 14 At1g13090 "cytochrome P450 71B28, putative (CYP71B28) Identical to Cytochrome P450 (SP:Q9SAE3) [Arabidopsis thaliana]; strong similarity to gb|X97864 cytochrome P450 from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|N65665, gb|T14112, gb|T76255, gb|T20906 and gb|AI100027 come from this gene" 7 2 2 15 At1g13150 "cytochrome P450, putative strong similarity to gi|3313615 F21J9.9 from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family" 7 2 2 16 At1g15800 expressed protein 7 2 2 17 At1g15850 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); mRNA-associated protein mrnp 41 (SP:P78406) [Homo sapiens]; similar to mitotic checkpoint protein GI:9294423 from [Arabidopsis thaliana] 7 2 2 18 At1g16000 expressed protein 7 2 2 19 At1g16060 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 7 2 2 20 At1g16230 "syntaxin-related family protein similar to syntaxin of plants 51 [Arabidopsis thaliana] GI:13811644, syntaxin of plants 52 [Arabidopsis thaliana] GI:13811646" 7 2 2 21 At1g16290 expressed protein 7 2 2 22 At1g16445 methylase-related similar to YtqB (GI:2952524) [Streptococcus mutans] 7 2 2 23 At1g16510 auxin-responsive family protein similar to indole-3-acetic acid induced protein (SP:D14414) [Vigna radiata.]; ESTs gb|AA712892 and gb|Z17613 come from this gene 7 2 2 24 At1g19300 glycosyl transferase family 8 protein contains Pfam profile: PF01501 Glycosyl transferase family 8 7 2 2 25 At1g19360 expressed protein 7 2 3 1 At1g19520 expressed protein 7 2 3 2 At1g19580 bacterial transferase hexapeptide repeat-containing protein contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats) 7 2 3 3 At1g19770 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 7 2 3 4 At1g19840 auxin-responsive family protein similar to auxin-induced protein TGSAUR21 (GI:10185818) [Tulipa gesneriana] 7 2 3 5 At1g20020 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) from {Pisum sativum} SP|P10933, {Mesembryanthemum crystallinum} SP|P41343, {Spinacia oleracea} SP|P00455, [Capsicum annuum] GI:6899972" 7 2 3 6 At1g20090 "Rac-like GTP-binding protein (ARAC4) / Rho-like GTP-binding protein (ROP2) identical to SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP binding protein ROP2) [Arabidopsis thaliana], Rho-like GTP binding protein [Arabidopsis thaliana] GI:2654009" 7 2 3 7 At1g22880 glycosyl hydrolase family 9 protein similar to GB:AAB65156 and GB:AAA96135 7 2 3 8 At1g22910 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); similar to GB:AAC33496 7 2 3 9 At1g23050 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 7 2 3 10 At1g23080 "auxin efflux carrier protein, putative similar to efflux carrier of polar auxin transport [Brassica juncea] gi|12331173|emb|CAC24691" 7 2 3 11 At1g23240 caleosin-related family protein similar to caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]; similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 7 2 3 12 At1g23280 MAK16 protein-related contains similarity to MAK16 protein SP:P10962 from [Saccharomyces cerevisiae] 7 2 3 13 At1g23440 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site 7 2 3 14 At1g23480 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535 isoform contains GG acceptor splice site at intron 1" 7 2 3 15 At1g27160 valyl-tRNA synthetase / valine--tRNA ligase-related similar to valyl tRNA synthetase GI:1890130 from [Arabidopsis thaliana] 7 2 3 16 At1g27220 paired amphipathic helix repeat-containing protein similar to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 7 2 3 17 At1g27380 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 7 2 3 18 At1g27420 "kelch repeat-containing F-box family protein similar to MIPP proteins (gi|2191178, sp|P28575); contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 2 3 19 At1g27570 phosphatidylinositol 3- and 4-kinase family protein contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 7 2 3 20 At1g27610 hypothetical protein identical to hypothetical protein GB:AAF24964 GI:6693038 from (Arabidopsis thaliana) 7 2 3 21 At1g27770 "calcium-transporting ATPase 1, plasma membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid envelope ATPase 1 (PEA1) identical to SP|Q37145 Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) {Arabidopsis thaliana}; identical to cDNA envelope Ca2+-ATPase (PEA1) chloroplast gene encoding chloroplast protein GI:509809" 7 2 3 22 At1g27820 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Homo sapiens]" 7 2 3 23 At1g30757 expressed protein 7 2 3 24 At1g30810 transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains similarity to Swiss-Prot:P29375 retinoblastoma-binding protein 2 (RBBP-2) [Homo sapiens]; contains Pfam domains PF02375: jmjN domain and PF02373: jmjC domain; intron between exons 6 and 7 was required to circumvent a frameshift. There could be an underlying sequence error. 7 2 3 25 At1g30990 "major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:20810]; similar to ESTs gb|W43264, gb|H36765, gb|R30617, gb|AA042095, and emb|Z27272 ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 7 2 4 1 At1g31060 expressed protein similar to EST gb|T43267 7 2 4 2 At1g31240 expressed protein identical to hypothetical protein GB:AAD21690 GI:4512621 from (Arabidopsis thaliana) 7 2 4 3 At1g31300 expressed protein similar to hypothetical protein GB:AAF24587 GI:6692122 from [Arabidopsis thaliana] 7 2 4 4 At1g31470 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 7 2 4 5 At1g31520 hypothetical protein 7 2 4 6 At1g34570 expressed protein 7 2 4 7 At1g34640 expressed protein 7 2 4 8 At1g35090 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 7 2 4 9 At1g35170 expressed protein 7 2 4 10 At1g35375 hypothetical protein 7 2 4 11 At1g35460 basic helix-loop-helix (bHLH) family protein similar to GI:6166283 from [Pinus taeda] 7 2 4 12 At1g35625 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326" 7 2 4 13 At1g35670 "calcium-dependent protein kinase 2 (CDPK2) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 7 2 4 14 At1g47310 expressed protein 7 2 4 15 At1g47380 protein phosphatase 2C-related / PP2C-related contains similarity to protein phosphatase 2C GB:AAD25933 GI:4587992 from [Arabidopsis thaliana] 7 2 4 16 At1g47540 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 7 2 4 17 At1g47610 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein (GI:2739374) [Arabidopsis thaliana] 7 2 4 18 At1g47783 hypothetical protein 7 2 4 19 At1g47820 expressed protein identical to hypothetical protein GB:AAF19740 GI:6634732 from [Arabidopsis thaliana] 7 2 4 20 At1g48020 invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 2 4 21 At1g48070 expressed protein 7 2 4 22 At1g51100 expressed protein 7 2 4 23 At1g51160 "synbindin, putative similar to Swiss-Prot:Q9ES56 synbindin (TRS23 homolog) [Mus musculus]" 7 2 4 24 At1g51350 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 7 2 4 25 At1g51380 "eukaryotic translation initiation factor 4A, putative / eIF-4A, putative " 7 2 5 1 At1g51530 RNA recognition motif (RRM)-containing protein 7 2 5 2 At1g51590 "mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max][GI:6552504]" 7 2 5 3 At1g51710 "ubiquitin-specific protease 6, putative (UBP6) similar to GI:11993465" 7 2 5 4 At1g51770 "hypothetical protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 7 2 5 5 At1g54385 expressed protein ; expression supported by MPSS 7 2 5 6 At1g54440 "3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein similar to SP|Q01780 Polymyositis/scleroderma autoantigen 2 {Homo sapiens}; contains Pfam profiles PF00570: HRDC domain, PF01612: 3'-5' exonuclease" 7 2 5 7 At1g54620 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 2 5 8 At1g54700 hypothetical protein 7 2 5 9 At1g54840 expressed protein 7 2 5 10 At1g54920 expressed protein 7 2 5 11 At1g55060 polyubiquitin (UBQ12) identical to polyubiquitin (ubq12) gene sequence GI:304121 from [Arabidopsis thaliana] 7 2 5 12 At1g55130 "endomembrane protein 70, putative similar to multispanning membrane protein GI:2276460 from [Homo sapiens]" 7 2 5 13 At1g59630 "F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana] contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain;" 7 2 5 14 At1g59670 "glutathione S-transferase, putative similar to glutathione S-transferase GB:AAF29773 GI:6856103 from [Gossypium hirsutum]" 7 2 5 15 At1g59820 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Mus musculus [SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 7 2 5 16 At1g59850 expressed protein 7 2 5 17 At1g60000 "29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative similar to 29 kDa ribonucleoprotein chloroplast precursor {Nicotiana sylvestris} SP|Q08935, SP|Q08937; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) contains an AG-donor site at intron." 7 2 5 18 At1g60050 nodulin-related low similarity to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 7 2 5 19 At1g60280 no apical meristem (NAM) protein-related contains Pfam PF02365: No apical meristem (NAM) protein; contains similarity to NAM-like protein GI:4337200 from [Arabidopsis thaliana] 7 2 5 20 At1g60370 F-box family protein similar to hypothetical protein GI:9993352 from [Arabidopsis thaliana] 7 2 5 21 At1g63230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 5 22 At1g63260 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 7 2 5 23 At1g63440 "copper-exporting ATPase, putative / responsive-to-antagonist 1, putative / copper-transporting ATPase, putative similar to ATP dependent copper transporter SP|Q9S7J8 [Arabidopsis thaliana]" 7 2 5 24 At1g63500 protein kinase-related low similarity to protein kinase [Arabidopsis thaliana]; contains Pfam profile: PF00069 Eukaryotic protein kinase domain 7 2 5 25 At1g63660 "GMP synthase [glutamine-hydrolyzing], putative / glutamine amidotransferase, putative similar to SP|P38625 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase) {Saccharomyces cerevisiae}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 7 2 6 1 At1g63690 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 7 2 6 2 At1g63855 expressed protein 7 2 6 3 At1g63900 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 2 6 4 At1g66680 "S locus-linked protein, putative similar to S locus-linked protein SLL2 [Brassica napus] GI:1518113" 7 2 6 5 At1g66750 "cell division protein kinase, putative similar to cell division protein kinase 7 [Homo sapiens] SWISS-PROT:P50613" 7 2 6 6 At1g66910 "protein kinase, putative similar to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208" 7 2 6 7 At1g66950 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza] 7 2 6 8 At1g67110 "cytochrome P450, putative similar to Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];" 7 2 6 9 At1g67170 expressed protein similar to enterophilin-2L (GI:12718845) [Cavia porcellus]; similar to Hyaluronan mediated motility receptor (Intracellular hyaluronic acid binding protein) (Receptor for hyaluronan-mediated motility) (CD168 antigen) (Swiss-Prot:O75330) [Homo sapiens] 7 2 6 10 At1g67340 zinc finger (MYND type) family protein / F-box family protein 7 2 6 11 At1g67410 exostosin family protein contains Pfam profile: PF03016 Exostosin family 7 2 6 12 At1g70060 paired amphipathic helix repeat-containing protein similar to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 7 2 6 13 At1g70100 expressed protein 7 2 6 14 At1g70270 expressed protein 7 2 6 15 At1g70330 "equilibrative nucleoside transporter family protein contains similarity to SWISS-PROT:Q14542 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type, 36 kDa nucleolar protein HNP36, Hydrophobic nucleolar protein, 36 kDa, Delayed-early response protein 12) [Homo sapiens]" 7 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 7 2 6 17 At1g70510 homeobox protein knotted-1 like 2 (KNAT2) (K1) identical to homeobox protein knotted-1 like 2 ( KNAT2/ ATK1) SP: from [Arabidopsis thaliana] 7 2 6 18 At1g70660 ubiquitin-conjugating enzyme family protein similar to TRAF6-regulated IKK activator 1 beta Uev1A [Homo sapiens] GI:10880969; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 7 2 6 19 At1g70720 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q42534, Phaseolus vulgaris SP|Q43111; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 7 2 6 20 At1g73570 suppressor of lin-12-like protein-related / sel-1 protein-related similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L)(SP:Q9UBV2) {Homo sapiens} 7 2 6 21 At1g73610 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL6 (GI:15054390), EXL4 (GI:15054388) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 7 2 6 22 At1g73750 expressed protein contains Pfam profile: PF00561 alpha/beta hydrolase fold 7 2 6 23 At1g73805 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 7 2 6 24 At1g73965 CLE13 CLAVATA3/ESR-Related 13 (CLE13) 7 2 6 25 At1g74020 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088 7 2 7 1 At1g74180 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 7 2 7 2 At1g74240 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 7 2 7 3 AT5G57480 PC-1 B06 7 2 7 4 3XSSC PC-1 B18 7 2 7 5 AT1G29930 PC-1 F06 7 2 7 6 3XSSC PC-1 F18 7 2 7 7 AT3G44150 PC-1 J06 7 2 7 8 3XSSC PC-1 J18 7 2 7 9 AT4G00810 PC-1 N06 7 2 7 10 3XSSC PC-1 N18 7 2 7 11 At1g77020 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein [Saccharomyces cerevisiae]; contains Pfam profile PF00226 DnaJ domain 7 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 7 2 7 13 At1g77230 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 7 2 7 14 At1g77290 tetrachloro-p-hydroquinone reductive dehalogenase-related contains similarity to tetrachloro-p-hydroquinone reductive dehalogenase GI:148689 from [Flavobacterium sp.] 7 2 7 15 At1g77470 "replication factor C 36 kDA, putative similar to SWISS-PROT:P40937 activator 1 36 kDa subunit (Replication factor C 36 kDa subunit, A1 36 kDa subunit, RF-C 36 kDa subunit, RFC36) [Homo sapiens]" 7 2 7 16 At1g77510 "protein disulfide isomerase, putative similar to protein disulfide isomerase precursor GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit: PF00085 Thioredoxins" 7 2 7 17 At1g77690 "amino acid permease, putative similar to AUX1 (regulator of root gravitropism, putative permease) GI:1531758 GB:CAA67308 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 7 2 7 18 At1g77750 "30S ribosomal protein S13, chloroplast, putative similar to putative 30S ribosomal protein S13, chloroplast precursor GB:P42732 [Arabidopsis thaliana]" 7 2 7 19 At1g80290 "glycosyltransferase family protein 47 similar to exostosin, Homo sapiens [SP|O43909], [SP|Q16394]" 7 2 7 20 At1g80350 katanin 1 (KTN1) identical to katanin 1 (KTN1) [Arabidopsis thaliana] GI:14133602 7 2 7 21 At1g80500 expressed protein similar to Sedlin (Swiss-Prot:O14582) [Homo sapiens]; similar to MBP-1 interacting protein-2A; MIP-2A (GI:9937493) [Homo sapiens] 7 2 7 22 At1g80560 "3-isopropylmalate dehydrogenase, chloroplast, putative strong similarity to 3-ISOPROPYLMALATE DEHYDROGENASE PRECURSOR GB:P29102 SP|P29102 from [Brassica napus]" 7 2 7 23 At1g80740 chromomethylase 1 (CMT1) identical to chromomethylase GB:AAC02660 GI:2865416 from [Arabidopsis thaliana] 7 2 7 24 At1g80790 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 7 2 7 25 At1g80940 expressed protein 7 2 8 1 At1g80990 XH domain-containing protein contains Pfam profile PF03469: XH domain 7 2 8 2 At2g03980 "GDSL-motif lipase/hydrolase family protein similar to Anther-specific proline-rich protein APG from Brassica napus (SP|P40603 ), Arabidopsis thaliana (GI:22599); contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 7 2 8 3 At2g04037 hypothetical protein 7 2 8 4 At2g04190 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 7 2 8 5 At2g04270 glycoside hydrolase starch-binding domain-containing protein contains Pfam profile: PF00686 starch binding domain 7 2 8 6 At2g04450 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 7 2 8 7 At2g04520 "eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative strong similarity to translation initiation factor (eIF-1A) [Beta vulgaris] GI:17977975; contains Pfam profile PF01176: Eukaryotic initiation factor 1A" 7 2 8 8 At2g04700 ferredoxin thioredoxin reductase catalytic beta chain family protein contains Pfam profile: PF02943 ferredoxin thioredoxin reductase catalytic beta 7 2 8 9 At2g04795 expressed protein 7 2 8 10 At2g11620 hypothetical protein 7 2 8 11 At2g11890 expressed protein 7 2 8 12 At2g12480 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II precursor (Carboxypeptidase D) (CP-MII) (SP:P08818) [Hordeum vulgare] 7 2 8 13 At2g12695 hypothetical protein 7 2 8 14 At2g13360 "serine-glyoxylate aminotransferase-related similar to serine-glyoxylate aminotransferase (GI:21535798)[Methylobacterium dichloromethanicum; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V]" 7 2 8 15 At2g13450 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 7 2 8 16 At2g13720 hypothetical protein weak similarity to SP|P30182 DNA topoisomerase II (EC 5.99.1.3) {Arabidopsis thaliana} 7 2 8 17 At2g13810 "aminotransferase class I and II family protein low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii GP|14278621; contains Pfam profile PF00155 aminotransferase, classes I and II" 7 2 8 18 At2g17110 expressed protein 7 2 8 19 At2g17170 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; weak similarity to Protein kinase APK1A (EC 2.7.1.-) (Swiss-Prot:Q06548) [Arabidopsis thaliana]" 7 2 8 20 At2g17340 "pantothenate kinase-related contains Pfam domain, PF01937: Protein of unknown function; supported by tandem duplication of pantothenate kinase -related protein (TIGR_Ath1:At2g17320) [Arabidopsis thaliana]" 7 2 8 21 At2g17410 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain 7 2 8 22 At2g17600 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 7 2 8 23 At2g17670 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 8 24 At2g17800 Rac-like GTP-binding protein (ARAC1) (ATGP2) identical to Rac-like GTP-binding protein (ARAC1) SP:Q38902 from [Arabidopsis thaliana] 7 2 8 25 At2g17860 pathogenesis-related thaumatin family protein similar to receptor serine/threonine kinase PR5K [Arabidopsis thaliana] GI:1235680; contains Pfam profile PF00314: Thaumatin family 7 2 9 1 At2g20616 hypothetical protein 7 2 9 2 At2g20635 hypothetical protein 7 2 9 3 At2g20790 expressed protein weak similarity to clathrin-adaptor medium chain apm 3 (GI:12000359) [Dictyostelium discoideum]; weak similarity to Adapter-related protein complex 3 mu 2 subunit (Clathrin coat assembly protein AP47 homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2) (HA1 47 kDa subunit homolog 2) (P47B) (Swiss-Prot:P53678) [Rattus norvegicus] 7 2 9 4 At2g20820 expressed protein . 7 2 9 5 At2g20950 expressed protein 7 2 9 6 At2g20980 expressed protein 7 2 9 7 At2g21170 "triosephosphate isomerase, chloroplast, putative similar to Triosephosphate isomerase, chloroplast precursor: SP|P48496 from Spinacia oleracea, SP|P46225 from Secale cereale" 7 2 9 8 At2g21210 "auxin-responsive protein, putative similar to small auxin-up regulated protein SAUR (GI:3043536) [Raphanus sativus]" 7 2 9 9 At2g24030 expressed protein and genefinder 7 2 9 10 At2g24090 ribosomal protein L35 family protein contains Pfam profile PF01632: ribosomal protein L35 7 2 9 11 At2g24280 serine carboxypeptidase S28 family protein contains Pfam profile: PF05577 Serine carboxypeptidase S28 7 2 9 12 At2g24330 expressed protein 7 2 9 13 At2g24510 "F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]" 7 2 9 14 At2g24570 WRKY family transcription factor identical to WRKY transcription factor 17 GI:15991743 from [Arabidopsis thaliana] 7 2 9 15 At2g24740 "SET domain-containing protein (SUVH8) identical to SUVH8 [Arabidopsis thaliana] GI:13517757; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain" 7 2 9 16 At2g24800 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781338|emb|CAA71496" 7 2 9 17 At2g27500 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 7 2 9 18 At2g27540 expressed protein 7 2 9 19 At2g27720 60S acidic ribosomal protein P2 (RPP2A) 7 2 9 20 At2g27775 expressed protein 7 2 9 21 At2g27930 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 7 2 9 22 At2g27990 homeodomain-containing protein 7 2 9 23 At2g28140 expressed protein 7 2 9 24 At2g28200 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 7 2 9 25 At2g30940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 2 10 1 At2g30980 shaggy-related protein kinase delta / ASK-delta / ASK-dzeta (ASK4) identical to shaggy-related protein kinase delta (ASK-delta) (ASK- dzeta) [Arabidopsis thaliana] SWISS-PROT:Q39010 7 2 10 2 At2g31120 expressed protein 7 2 10 3 At2g31180 myb family transcription factor (MYB14) similar to myb-related transcription factor GI:1370140 from [Lycopersicon esculentum] 7 2 10 4 At2g31345 expressed protein 7 2 10 5 At2g31370 bZIP transcription factor (POSF21) identical to GB:Q04088 7 2 10 6 At2g31560 expressed protein 7 2 10 7 At2g31600 expressed protein 7 2 10 8 At2g34210 KOW domain-containing transcription factor family protein 7 2 10 9 At2g34260 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina} 7 2 10 10 At2g34370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 10 11 At2g34410 O-acetyltransferase family protein similar to O-acetyltransferase (GI:17016934) [Homo sapiens]; contains 11 transmembrane domains 7 2 10 12 At2g34555 gibberellin 2-oxidase / GA2-oxidase (GA2OX3) identical to ga2ox3 [GI:4678370] 7 2 10 13 At2g34600 expressed protein 7 2 10 14 At2g34780 expressed protein 7 2 10 15 At2g34840 "coatomer protein epsilon subunit family protein / COPE family protein similar to SP|O14579 Coatomer epsilon subunit (Epsilon-coat protein) (Epsilon-COP) from Homo sapiens, SP|Q60445 from Cricetulus griseus" 7 2 10 16 At2g37435 expressed protein 7 2 10 17 At2g37470 "histone H2B, putative strong similarity to histone H2B from Lycopersicon esculentum GI:3021483, GI:3021485, Capsicum annuum SP|O49118; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 7 2 10 18 At2g37630 myb family transcription factor (MYB91) contains Pfam profile: PF00249 myb-like DNA-binding domain 7 2 10 19 At2g37690 "phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative similar to SP|P55195 Phosphoribosylaminoimidazole carboxylase, chloroplast precursor (EC 4.1.1.21) (AIR carboxylase) (AIRC) {Vigna aconitifolia}; contains Pfam profiles PF02222: ATP-grasp domain, PF00731: AIR carboxylase" 7 2 10 20 At2g37840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 2 10 21 At2g37900 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 7 2 10 22 At2g38050 "3-oxo-5-alpha-steroid 4-dehydrogenase, putative / steroid 5-alpha-reductase, putative identical to gi:1280611; contains a steroid 5-alpha reductase, C-terminal domain" 7 2 10 23 At2g38110 phospholipid/glycerol acyltransferase family protein low similarity to SP|O87707 CicA protein {Caulobacter crescentus}; contains Pfam profile PF01553: Acyltransferase 7 2 10 24 At2g40650 pre-mRNA splicing factor PRP38 family protein contains Pfam profile PF03371: PRP38 family 7 2 10 25 At2g40710 expressed protein 7 2 11 1 At2g40850 phosphatidylinositol 3- and 4-kinase family protein contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 7 2 11 2 At2g40910 "F-box protein-related similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 7 2 11 3 At2g41020 WW domain-containing protein contains Pfam domain PF00397: WW domain 7 2 11 4 At2g41090 "calmodulin-like calcium-binding protein, 22 kDa (CaBP-22) identical to SP|P30187 22 kDa calmodulin-like calcium-binding protein (CABP-22) [Arabidopsis thaliana]" 7 2 11 5 At2g41240 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 2 11 6 At2g41300 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088; protein alignments support a CG non-consensus donor splice site. 7 2 11 7 At2g43910 "thiol methyltransferase, putative similar to thiol methyltransferase 1 GI:14583119 from [Brassica oleracea]" 7 2 11 8 At2g43950 expressed protein 7 2 11 9 At2g44065 "ribosomal protein L2 family protein similar to ribosomal protein L2 [Gossypium arboreum] GI:17644114; contains Pfam profile PF03947: Ribosomal Proteins L2, C-terminal domain" 7 2 11 10 At2g44110 "seven transmembrane MLO family protein / MLO-like protein 15 (MLO15) identical to MLO-like protein 15 (AtMlo15) SP:O80580 from [Arabidopsis thaliana]; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 7 2 11 11 At2g44260 expressed protein 7 2 11 12 At2g44330 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 2 11 13 At2g44500 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'axi 1 protein from Nicotiana tabacum -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 7 2 11 14 At2g44540 glycosyl hydrolase family 9 protein 7 2 11 15 At2g47210 myb family transcription factor contains Pfam profile: PF00249 myb DNA-binding domain 7 2 11 16 At2g47270 expressed protein 7 2 11 17 At2g47440 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain; similar to GP|2104534|AF001308 (T10M13.11)" 7 2 11 18 At2g47480 expressed protein 7 2 11 19 At2g47640 "small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative similar to small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2) [Mus musculus] SWISS-PROT:P43330" 7 2 11 20 At2g47690 NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-15 kDa) (CI-15 kDa) (Swiss-Prot:O43920) [Homo sapiens 7 2 11 21 At2g47860 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 7 2 11 22 At2g47900 "F-box family protein / tubby family protein similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein Length(GI:6730158) [Mus musculus]; similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Tubby protein homolog (Swiss-Prot:O88808) [Rattus norvegicus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family" 7 2 11 23 At3g03220 "expansin, putative (EXP13) similar to expansin precursor GB:AAD13631 from [Lycopersicon esculentum]; alpha-expansin gene family, PMID:11641069" 7 2 11 24 At3g03270 universal stress protein (USP) family protein / early nodulin ENOD18 family protein contains Pfam profile PF00582: universal stress protein family; similar to early nodulin ENOD18 (GI:11602747) [Vicia faba] 7 2 11 25 At3g03430 "polcalcin, putative / calcium-binding pollen allergen, putative almost identical to polcalcin Bra r 2/Bra n 2 (calcium-binding pollen allergen Bra r 2/Bra n 2) SP:Q39406 from [Brassica napus]" 7 2 12 1 At3g03490 peroxisomal protein PEX19 family protein contains Pfam profile: PF04614 Pex19 protein family 7 2 12 2 At3g03670 "peroxidase, putative similar to peroxidase GB:CAA66966 [Arabidopsis thaliana]" 7 2 12 3 At3g03730 F-box family protein contains F-box domain Pfam:PF00646 7 2 12 4 At3g03870 expressed protein predicted using genefinder 7 2 12 5 At3g03910 "glutamate dehydrogenase, putative similar to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis thaliana] SWISS-PROT:Q43314" 7 2 12 6 At3g06435 Expressed protein 7 2 12 7 At3g06480 "DEAD box RNA helicase, putative similar to RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF00397: WW domain" 7 2 12 8 At3g06610 DNA-binding enhancer protein-related similar to huntingtin interacting protein HYPK (GI:3329429) [Homo sapiens]; identical to Egd2p (GI:172043) [Saccharomyces cerevisiae] similar to EGD2 protein (GAL4 DNA-binding enhancer protein 2) (Swiss-Prot:P38879) [Saccharomyces cerevisiae] 7 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 7 2 12 10 At3g06760 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 7 2 12 11 At3g06830 "pectinesterase family protein contains Pfam profiles: PF01095 pectinesterase,PF04043 plant invertase/pectin methylesterase inhibitor" 7 2 12 12 At3g06990 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 7 2 12 13 At3g07040 "disease resistance protein RPM1 (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Identical to RPM1 (gi:1361985)" 7 2 12 14 At3g10080 "germin-like protein, putative similar to germin-like protein 2 [Oryza sativa] GI:2655287" 7 2 12 15 At3g10120 expressed protein 7 2 12 16 At3g10280 "fatty acid elongase 3-ketoacyl-CoA synthase, putative similar to fatty acid elongase 3-ketoacyl-CoA synthase 1 GB:AAC99312 [Arabidopsis thaliana]" 7 2 12 17 At3g10320 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 7 2 12 18 At3g10480 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein; N-terminus similar to unknown protein GB:AAD25613 [Arabidopsis thaliana] 7 2 12 19 At3g10510 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 2 12 20 At3g10640 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 7 2 12 21 At3g10690 "DNA gyrase subunit A family protein similar to SP|P94605 DNA gyrase subunit A (EC 5.99.1.3). {Clostridium acetobutylicum}; contains Pfam profiles PF00521: DNA gyrase/topoisomerase IV A subunit, PF03989: DNA gyrase C-terminal domain beta-propeller" 7 2 12 22 At3g13120 "30S ribosomal protein S10, chloroplast, putative similar to 30S ribosomal protein S10 GB:P02364 [Escherichia coli] (est matches suggest the N-terminal extension)" 7 2 12 23 At3g13175 expressed protein 7 2 12 24 At3g13260 replication protein-related similar to Xenopus laevis replication protein A1 (SW:RFA1_XENLA) {Arabidopsis thaliana} 7 2 12 25 At3g13310 DNAJ heat shock N-terminal domain-containing protein similar to J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile: PF00226 DnaJ domain 7 2 13 1 At3g13470 "chaperonin, putative similar SWISS-PROT:P21240- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) [Arabidopsis thaliana]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 7 2 13 2 At3g13530 MAP3K epsilon protein kinase identical to MAP3K epsilon protein kinase [Arabidopsis thaliana] gi|3549652|emb|CAA12272 7 2 13 3 At3g13672 seven in absentia (SINA) family protein low similarity to SP|P21461 Developmental protein seven in absentia {Drosophila melanogaster}; contains Pfam profile PF03145: Seven in absentia protein family 7 2 13 4 At3g13682 amine oxidase family protein / SWIRM domain-containing protein similar to polyamine oxidase isoform-1 [Homo sapiens] GI:14860862; contains Pfam profile:PF01593 Flavin containing amine oxidase 7 2 13 5 At3g16160 tesmin/TSO1-like CXC domain-containing protein low similarity to cysteine-rich polycomb-like protein (cpp1) [Glycine max] GI:4218187; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain 7 2 13 6 At3g16210 F-box family protein contains F-box domain Pfam:PF00646 7 2 13 7 At3g16390 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, epithiospecifier [Arabidopsis thaliana] GI:16118845; contains Pfam profiles PF01419 jacalin-like lectin family, PF01344 Kelch motif" 7 2 13 8 At3g16450 jacalin lectin family protein similar to SP|Q9SAV1 Myrosinase binding protein-like At1g52030 {Arabidopsis thaliana}; contains Pfam profile: PF01419 jacalin-like lectin domain 7 2 13 9 At3g16580 F-box family protein contains F-box domain Pfam:PF00646 7 2 13 10 At3g16640 translationally controlled tumor family protein similar to translationally controlled tumor protein GB:AAD10032 from [Hevea brasiliensis] 7 2 13 11 At3g16800 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase-2C GB:AAC36699 from [Mesembryanthemum crystallinum]" 7 2 13 12 At3g16857 "two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain; similar to ARR1 protein GB:BAA74528 from [Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39 (11), 1232-1239)" 7 2 13 13 At3g19490 "sodium hydrogen antiporter, putative similar to NhaD [Vibrio parahaemolyticus] gi|3123728|dbj|BAA25994; Na+/H+ aniporter (NhaD) family member, PMID:11500563" 7 2 13 14 At3g19530 hypothetical protein 7 2 13 15 At3g19680 expressed protein 7 2 13 16 At3g19740 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 7 2 13 17 At3g19910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 2 13 18 At3g19970 expressed protein 7 2 13 19 At3g20110 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 7 2 13 20 At3g20160 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:2578821; similar to geranyl geranyl pyrophosphate synthase GB:BAA23157 [Arabidopsis thaliana]" 7 2 13 21 At3g22880 "meiotic recombination protein, putative similar to Swiss-Prot:Q14565 meiotic recombination protein DMC1/LIM15 homolog [Homo sapiens]; contains non-consensus AT/AC non-consensus splice sites at intron 14" 7 2 13 22 At3g22940 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 7 2 13 23 At3g23090 expressed protein 7 2 13 24 At3g23150 "ethylene receptor, putative (ETR2) similar to putative ethylene receptor; ETR2 [Arabidopsis thaliana] gi|3687654|gb|AAC62208." 7 2 13 25 At3g23290 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 7 2 14 1 At3g23330 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 2 14 2 At3g23540 expressed protein ; expression supported by MPSS 7 2 14 3 At3g23600 "dienelactone hydrolase family protein similar to SP|Q9ZT66 Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) {Zea mays}; contains Pfam profile: PF01738 Dienelactone hydrolase family" 7 2 14 4 At3g26420 "glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotiana sylvestris]; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 7 2 14 5 At3g26480 "transducin family protein / WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (5 copies, 2 below cutoff); related to LACK protective antigen (GI:13625467) [Leishmania donovani]" 7 2 14 6 At3g26620 "LOB domain protein, putative / lateral organ boundaries domain protein, putative (LBD23) identical to SP|P59467 Putative LOB domain protein 23 {Arabidopsis thaliana}" 7 2 14 7 At3g26670 expressed protein 7 2 14 8 At3g26790 "transcriptional regulator (FUSCA3) identical to FUSCA3 GB:AAC35247 [Arabidopsis thaliana] (Plant J. 6, 379-387 (1994))" 7 2 14 9 At3g26850 expressed protein 7 2 14 10 At3g26980 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 2 14 11 At3g27030 expressed protein 7 2 14 12 At3g29810 "phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 similar to phytochelatin synthetase [Hordeum vulgare subsp. vulgare] GI:29570314; identified in Roudier, et al, Plant Phys. (2002) 130:538-548 (PMID:12376623); contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region" 7 2 14 13 At3g30190 hypothetical protein 7 2 14 14 At3g30390 "amino acid transporter family protein low similarity to neuronal glutamine transporter [Rattus norvegicus] GI:6978016; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 7 2 14 15 At3g30470 expressed protein 7 2 14 16 At3g30670 hypothetical protein 7 2 14 17 At3g30730 hypothetical protein 7 2 14 18 At3g31320 hypothetical protein 7 2 14 19 At3g31410 hypothetical protein similar to hypothetical protein GB:CAB77996 GI:7267513 from [Arabidopsis thaliana] 7 2 14 20 At3g44710 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 7 2 14 21 At3g44740 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|O23627 Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis thaliana}; contains Pfam profile PF00587: tRNA synthetase class II core domain (G, H, P, S and T)" 7 2 14 22 At3g44890 "50S ribosomal protein L9, chloroplast (CL9) contains Pfam profile PF03948: Ribosomal protein L9, C-terminal domain; contains Pfam profile PF01281: ribosomal protein L9, N-terminal domain; contains TIGRfam profile TIGR00158: ribosomal protein L9" 7 2 14 23 At3g44940 expressed protein 7 2 14 24 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 7 2 14 25 At3g45150 "TCP family transcription factor, putative similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440) Oryza sativa] ; auxin-induced basic helix-loop-helix transcription factor - Gossypium hirsutum, EMBL:AF165924" 7 2 15 1 At3g45360 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 7 2 15 2 At3g45420 "lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, Prosite:PS00108" 7 2 15 3 At3g48230 expressed protein several hypothetical proteins - Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function 7 2 15 4 At3g48290 "cytochrome P450, putative very strong similarity to Cytochrome P450 71A24 (SP:Q9STK9)[Arabidopsis thaliana];" 7 2 15 5 At3g48460 "GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 7 2 15 6 At3g48520 cytochrome P450 family protein similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450 7 2 15 7 At3g48700 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 7 2 15 8 At3g48760 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 7 2 15 9 At3g48920 myb family transcription factor (MYB45) similar to MybHv33 GI:456214 from [Hordeum vulgare]; contains PFAM profile: myb DNA binding domain PF00249 7 2 15 10 At3g48980 expressed protein 7 2 15 11 At3g51830 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain ; Contains nonconsensus AT/AA splice site at intron 7" 7 2 15 12 At3g51880 high mobility group protein alpha (HMGalpha) / HMG protein alpha nearly identical to HMG protein (HMGalpha) [Arabidopsis thaliana] GI:2832357; contains Pfam profile PF00505: HMG (high mobility group) box 7 2 15 13 At3g52030 F-box family protein / WD-40 repeat family protein 7 2 15 14 At3g52070 expressed protein 7 2 15 15 At3g52200 "dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide acetyltransferase (E2) subunit of PDC [Arabidopsis thaliana] GI:559395; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain; supporting cDNA gi|5881964|gb|AF066080.1|AF066080" 7 2 15 16 At3g52260 pseudouridine synthase family protein similar to SP|P39219 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 7 2 15 17 At3g52410 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 7 2 15 18 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 7 2 15 19 At3g54990 "AP2 domain-containing transcription factor, putative similar to (SP:P47927) Floral homeotic protein APETALA2, Arabidopsis thaliana, U12546" 7 2 15 20 At3g55030 "phosphatidylglycerolphosphate synthase, putative similar to phosphatidylglycerolphosphate synthase GI:13365519 from [Arabidopsis thaliana]; contains non-consensus CG acceptor splice site at exon 4" 7 2 15 21 At3g55190 "esterase/lipase/thioesterase family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 7 2 15 22 At3g55250 "expressed protein predicted pectate-lyase, Arabidopsis thaliana, PIR:T06728" 7 2 15 23 At3g55430 "glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative similar to beta-1,3 glucanase GI:7414433 from [Pisum sativum]; contains Pfam profile PF00332: Glycosyl hydrolases family 17" 7 2 15 24 At3g55500 "expansin, putative (EXP16) similar to expansin GI:2828241 from [Brassica napus]; alpha-expansin gene family, PMID:11641069" 7 2 15 25 At3g55670 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 7 2 16 1 At3g55730 myb family transcription factor (MYB109) contains Pfam profile: PF00249 myb-like DNA-binding domain 7 2 16 2 At3g58580 endonuclease/exonuclease/phosphatase family protein similar to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 7 2 16 3 At3g58640 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 7 2 16 4 At3g58810 "zinc transporter, putative similar to zinc transporter 4; ZnT4 [Mus musculus] gi|2582990|gb|AAB82593; similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 7 2 16 5 At3g58870 "expressed protein predicted protein, Arabidopsis thaliana" 7 2 16 6 At3g59040 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 16 7 At3g59090 expressed protein 7 2 16 8 At3g59260 "pirin, putative similar to SP|O00625 Pirin {Homo sapiens}; contains Pfam profile PF02678: Pirin" 7 2 16 9 At3g59310 expressed protein identical to anthocyanin-related membrane protein 1 [Arabidopsis thaliana] GI:16416383; supporting cDNA gi|16416382|dbj|AB060644.1| 7 2 16 10 At3g61970 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857 and RAV2 GI:3868859, AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile PF02362: B3 DNA binding domain" 7 2 16 11 At3g62020 germin-like protein (GLP10) identical to germin-like protein subfamily 2 member 4 [SP|Q9M263] 7 2 16 12 At3g62190 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain 7 2 16 13 At3g62250 "ubiquitin extension protein 5 (UBQ5) / 40S ribosomal protein S27A (RPS27aC) identical to GI:166933, GI:166934" 7 2 16 14 At3g62410 CP12 domain-containing protein contains Pfam domain PF02672: CP12 domain 7 2 16 15 At3g62470 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 16 16 At3g62650 "expressed protein putative mitochondrial carrier protein At2g47490 - Arabidopsis thaliana, EMBL:AC002535" 7 2 16 17 At3g62700 "glutathione-conjugate transporter, putative similar to glutathione-conjugate transporter AtMRP4 GI:2959767 from [Arabidopsis thaliana]" 7 2 16 18 At4g01580 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 7 2 16 19 At4g01610 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase GI:609175 from [Nicotiana rustica]; contains an unusually short, 5nt exon" 7 2 16 20 At4g01770 hypothetical protein similar to T15B16.9 7 2 16 21 At4g01830 "multidrug resistance P-glycoprotein, putative similar to multidrug resistant P-glycoprotein GI:4204793 from [Solanum tuberosum]" 7 2 16 22 At4g01950 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase 7 2 16 23 At4g01995 expressed protein 7 2 16 24 At4g02150 importin alpha-2 subunit identical to importin alpha-2 subunit (Karyopherin alpha-2 subunit) (KAP alpha) SP:O04294 from [Arabidopsis thaliana] 7 2 16 25 At4g02200 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 7 2 17 1 At4g05136 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 7 2 17 2 At4g05180 "oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ2) identical to SP|Q41932 Oxygen-evolving enhancer protein 3-2, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) {Arabidopsis thaliana}; similar to SP|P12301 Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) {Spinacia oleracea}; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ)" 7 2 17 3 At4g05350 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 7 2 17 4 At4g05410 "transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); U3 snoRNP-associated 55-kDa protein, Homo sapiens, gb:NP_004695; Vegetatible incompatibility protein HET-E-1 (SP:Q00808) [Podospora anserina]" 7 2 17 5 At4g05590 "expressed protein contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041)" 7 2 17 6 At4g05633 hypothetical protein 7 2 17 7 At4g06746 AP2 domain-containing transcription factor family protein similar to AP2 domain containing protein RAP2.9 (GI:2281643) [Arabidopsis thaliana]. 7 2 17 8 At4g07390 "PQ-loop repeat family protein / transmembrane family protein similar to SP|Q60441 Mannose-P-dolichol utilization defect 1 protein (Suppressor of Lec15 and Lec35 glycosylation mutation) {Cricetulus griseus}, Lec35 protein [Cricetulus griseus] GI:9858721; contains Pfam profile PF04193: PQ loop repeat" 7 2 17 9 At4g10540 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 7 2 17 10 At4g10590 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 7 2 17 11 At4g10770 oligopeptide transporter OPT family protein similar to oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein 7 2 17 12 At4g10840 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515 TPR Domain 7 2 17 13 At4g10960 "UDP-glucose 4-epimerase, putative / UDP-galactose 4-epimerase, putative / Galactowaldenase, putative similar to UDP-galactose 4-epimerase from Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba GI:3021357 [AJ005082]" 7 2 17 14 At4g11010 "nucleoside diphosphate kinase 3, mitochondrial (NDK3) identical to Nucleoside diphosphate kinase III, mitochondrial precursor (NDK III) (NDP kinase III) (NDPK III) (SP:O49203) [Arabidopsis thaliana]; contains Pfam PF00334 : Nucleoside diphosphate kinase domain;" 7 2 17 15 At4g11170 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 2 17 16 At4g11211 expressed protein 7 2 17 17 At4g13960 F-box family protein contains F-box domain Pfam:PF00646 7 2 17 18 At4g14000 expressed protein 7 2 17 19 At4g14150 phragmoplast-associated kinesin-related protein (PAKRP1) 7 2 17 20 At4g14180 expressed protein ; expression supported by MPSS 7 2 17 21 At4g14310 peroxisomal membrane protein-related contains weak similarity to Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) (Swiss-Prot:P42925) [Mus musculus] 7 2 17 22 At4g14360 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 7 2 17 23 At4g14480 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 2 17 24 At4g14520 DNA-directed RNA polymerase II-related contains similarity to Swiss-Prot:P38421 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) [Arabidopsis thaliana] 7 2 17 25 At4g16890 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 2 18 1 At4g16950 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein.; closest homolog in Col-0 to RPP5 of clutivar Landsberg erecta." 7 2 18 2 At4g17090 "beta-amylase (CT-BMY) / 1,4-alpha-D-glucan maltohydrolase identical to beta-amylase enzyme GI:6065749 from [Arabidopsis thaliana]" 7 2 18 3 At4g17160 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:1208537 from [Glycine max]" 7 2 18 4 At4g17310 expressed protein 7 2 18 5 At4g17380 "DNA mismatch repair MutS family protein similar to SP|O15457 MutS protein homolog 4 from {Homo sapiens}, from [Mus musculus] GI:16416651; contains Pfam profile PF00488: MutS domain V" 7 2 18 6 At4g17550 "transporter-related similar to cAMP inducible 2 protein [Mus musculus] GI:4580997, glycerol 3-phosphate permease [Homo sapiens] GI:7543982; contains Pfam profile PF00083: major facilitator superfamily protein" 7 2 18 7 At4g17590 nucleolar protein-related contains weak similarity to Swiss-Prot:P40991 nucleolar protein NOP2 [Saccharomyces cerevisiae] 7 2 18 8 At4g20160 expressed protein ; expression supported by MPSS 7 2 18 9 At4g20230 "terpene synthase/cyclase family protein vetispiradiene synthase, Hyoscyamus muticus, PATX:G763421" 7 2 18 10 At4g20390 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 7 2 18 11 At4g20440 "small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|Q05856 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Drosophila melanogaster}" 7 2 18 12 At4g20730 "filament protein-related similar to Cytadherence high molecular weight protein 2 (SP:P47460) [Mycoplasma genitalium]; similar to YEAST NUF1 protein (Spindle poly body spacer protein SPC110) (SP:P32380) {Saccharomyces cerevisiae}; also SP|Q9UKX2|MYH2_HUMAN Myosin heavy chain, skeletal muscle, SP|P31732|OV71_ONCVO Muscle cell intermediate filament protein SP|P12882|MYH1_HUMAN Myosin heavy chain, skeletal muscle,. SP|Q17107|AV71_ACAVI Muscle cell intermediate filament protein" 7 2 18 13 At4g20800 FAD-binding domain-containing protein similar to SP|P93479 Reticuline oxidase precursor (EC 1.5.3.9) (Berberine-bridge-forming enzyme) {Papaver somniferum}; contains Pfam profile PF01565: FAD binding domain 7 2 18 14 At4g20980 "eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative similar to initiation factor 3d [Arabidopsis thaliana] GI:12407755, SP|O15371 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d) {Homo sapiens}; contains Pfam profile PF05091: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)" 7 2 18 15 At4g21040 "Dof-type zinc finger domain-containing protein finger protein rolB, Arabidopsis thaliana, PID:g1359493" 7 2 18 16 At4g23610 expressed protein 7 2 18 17 At4g23660 "UbiA prenyltransferase family protein similar to para-hydroxybenzoate--polyprenyltransferase, mitochondrial [Precursor] [Saccharomyces cerevisiae], SP|P32378; contains PF01040 UbiA prenyltransferase family domain" 7 2 18 18 At4g23840 leucine-rich repeat family protein 7 2 18 19 At4g23885 expressed protein 7 2 18 20 At4g24020 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 7 2 18 21 At4g24080 "HpcH/HpaI aldolase family protein similar to SP|Q47098 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) (HHED aldolase) {Escherichia coli}; contains Pfam profile PF03328: HpcH/HpaI aldolase family" 7 2 18 22 At4g24240 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 7 2 18 23 At4g24270 RNA recognition motif (RRM)-containing protein low similarity to tumor-rejection antigen SART3 [Mus musculus] GI:7637845; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 7 2 18 24 At4g26840 ubiquitin-like protein (SMT3) identical to Ubiquitin-like protein SMT3 SP:P55852 from[Arabidopsis thaliana]; identical to cDNA SMT3 protein GI:1707371 7 2 18 25 At4g26900 "imidazole glycerol phosphate synthase hisHF, chloroplast / IGP synthase / ImGPP synthase / IGPS identical to SP|Q9SZ30 Imidazole glycerol phosphate synthase hisHF, chloroplast precursor (IGP synthase) {Arabidopsis thaliana}" 7 2 19 1 At4g27040 expressed protein 7 2 19 2 At4g27100 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 7 2 19 3 At4g27280 calcium-binding EF hand family protein similar to EF-hand Ca2+-binding protein CCD1 [Triticum aestivum] GI:9255753; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 7 2 19 4 At4g27340 Met-10+ like family protein ; contains Pfam profile PF02475: Met-10+ like-protein 7 2 19 5 At4g27500 expressed protein non-consensus GA donor splice site at exon 6 7 2 19 6 At4g27560 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 7 2 19 7 At4g30130 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 7 2 19 8 At4g30190 "ATPase 2, plasma membrane-type, putative / proton pump 2, putative / proton-exporting ATPase, putative strong similarity to SP|P19456 ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2) {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profile PF00690: Cation transporter/ATPase, N-terminus" 7 2 19 9 At4g30330 "small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative similar to SWISS-PROT:P08578 small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E, Sm-E, SmE) [Chicken]" 7 2 19 10 At4g30390 expressed protein 7 2 19 11 At4g30520 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 7 2 19 12 At4g30580 phospholipid/glycerol acyltransferase family protein 7 2 19 13 At4g30750 expressed protein 7 2 19 14 At4g30790 expressed protein 7 2 19 15 At4g33280 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 7 2 19 16 At4g33350 "chloroplast inner membrane import protein Tic22, putative similar to Tic22 [Pisum sativum] gi|3769671|gb|AAC64606" 7 2 19 17 At4g33510 2-dehydro-3-deoxyphosphoheptonate aldolase 2 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 / DAHP synthetase 2 (DHS2) nearly identical to SP|Q00218 7 2 19 18 At4g33550 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 2 19 19 At4g33700 "CBS domain-containing protein contains Pfam profiles PF00571: CBS domain, PF01595: Domain of unknown function" 7 2 19 20 At4g33760 "tRNA synthetase class II (D, K and N) family protein similar to SP|P36419 Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) {Thermus thermophilus}; contains Pfam profile PF00152: tRNA synthetases class II (D, K and N)" 7 2 19 21 At4g33910 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Drosophila melanogaster [GI:4336512]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 7 2 19 22 At4g33950 "protein kinase, putative similar to abscisic acid-activated protein kinase [Vicia faba] gi|6739629|gb|AAF27340; contains protein kinase domain, Pfam:PF00069" 7 2 19 23 AT5G57480 PC-1 B06 7 2 19 24 3XSSC PC-1 B18 7 2 19 25 AT1G29930 PC-1 F06 7 2 20 1 3XSSC PC-1 F18 7 2 20 2 AT3G44150 PC-1 J06 7 2 20 3 3XSSC PC-1 J18 7 2 20 4 AT4G00810 PC-1 N06 7 2 20 5 3XSSC PC-1 N18 7 2 20 6 At4g36530 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Sphingomonas sp.] GI:3426124; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 2 20 7 At4g36550 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 7 2 20 8 At4g36700 cupin family protein low similarity to preproMP27-MP32 from Cucurbita cv. Kurokawa Amakuri [GI:691752]; contains Pfam profile PF00190: Cupin 7 2 20 9 At4g36750 "quinone reductase family protein similar to 1,4-benzoquinone reductase [Phanerochaete chrysosporium][GI:4454993]; similar to Trp repressor binding protein [Escherichia coli][SP|P30849]; contains flavodoxin domain PF00258" 7 2 20 10 At4g36900 AP2 domain-containing protein RAP2.10 (RAP2.10) Identical to GP:2632063 and GP:7270639 [Arabidopsis thaliana]; identical to cDNA TINY-like protein GI:2632062 7 2 20 11 At4g36960 RNA recognition motif (RRM)-containing protein similar to SP|P48809 Heterogeneous nuclear ribonucleoprotein 27C (hnRNP 48) {Drosophila melanogaster}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); non-consensus TA donor splice site at exon 6 7 2 20 12 At4g37140 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Interpro entry IPR000379 esterase/lipase/thioesterase family" 7 2 20 13 At4g37190 expressed protein 7 2 20 14 At4g39790 expressed protein ; expression supported by MPSS 7 2 20 15 At4g39840 expressed protein 7 2 20 16 At4g39990 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303738 from [Pisum sativum]" 7 2 20 17 At4g40042 expressed protein 7 2 20 18 At5g01075 expressed protein 7 2 20 19 At5g01130 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 7 2 20 20 At5g01260 glycoside hydrolase starch-binding domain-containing protein low similarity to SP|P31797 Cyclomaltodextrin glucanotransferase precursor (EC 2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase) {Bacillus stearothermophilus}; contains Pfam profile PF00686: Starch binding domain 7 2 20 21 At5g01320 "pyruvate decarboxylase, putative strong similarity to pyruvate decarboxylase 1 [Vitis vinifera] GI:10732644; contains InterPro entry IPR000399: Pyruvate decarboxylase" 7 2 20 22 At5g04030 hypothetical protein 7 2 20 23 At5g04080 expressed protein 7 2 20 24 At5g04250 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 7 2 20 25 At5g04320 expressed protein 7 2 21 1 At5g04490 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 7 2 21 2 At5g04550 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668) 7 2 21 3 At5g04740 ACT domain-containing protein contains Pfam profile PF01842: ACT domain 7 2 21 4 At5g04800 "40S ribosomal protein S17 (RPS17D) 40S ribosomal protein S17, Lycopersicon esculentum, EMBL:AF161704" 7 2 21 5 At5g07320 "mitochondrial substrate carrier family protein similar to peroxisomal Ca-dependent solute carrier [Oryctolagus cuniculus] GI:2352427 (mitochondrial carrier superfamily); contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain" 7 2 21 6 At5g07370 "inositol polyphosphate 6-/3-/5-kinase 2a (IPK2a) contains Pfam domain, PF03770: Inositol polyphosphate kinase" 7 2 21 7 At5g07540 glycine-rich protein (GRP16) oleosin; glycine-rich protein 16 (GRP16) PMID:11431566 7 2 21 8 At5g07600 oleosin / glycine-rich protein 7 2 21 9 At5g07790 expressed protein 7 2 21 10 At5g07850 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 7 2 21 11 At5g08030 glycerophosphoryl diester phosphodiesterase family protein similar to glycerophosphodiester phosphodiesterase [Borrelia hermsii] GI:1399038; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 7 2 21 12 At5g08090 hypothetical protein 7 2 21 13 At5g11110 "sucrose-phosphate synthase, putative similar to sucrose-phosphate synthase isoform 1, Citrus unshiu, PIR:S72648" 7 2 21 14 At5g11170 "DEAD/DEAH box helicase, putative (RH15) DEAD BOX RNA helicase RH15, Arabidopsis thaliana, EMBL:ATH010466" 7 2 21 15 At5g11320 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana" 7 2 21 16 At5g11380 "1-deoxy-D-xylulose 5-phosphate synthase, putative / 1-deoxyxylulose-5-phosphate synthase, putative / DXP-synthase, putative similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] GI:21322713; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain" 7 2 21 17 At5g11560 PQQ enzyme repeat-containing protein contains Pfam profile PF01011: PQQ enzyme repeat 7 2 21 18 At5g11610 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 7 2 21 19 At5g11780 expressed protein 7 2 21 20 At5g11840 "expressed protein predicted proteins in Synechococcus ,Cyanophora and other organisms" 7 2 21 21 At5g14980 "esterase/lipase/thioesterase family protein low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 7 2 21 22 At5g15040 paired amphipathic helix repeat-containing protein contains Pfam profile PF02671: Paired amphipathic helix repeat 7 2 21 23 At5g15200 "40S ribosomal protein S9 (RPS9B) 40S ribosomal protein S9, Chlamydomonas sp., EMBL:AU066528" 7 2 21 24 At5g15260 "expressed protein predicted proteins, Arabidopsis thaliana" 7 2 21 25 At5g15440 circadian clock coupling factor-related similar to circadian clock coupling factor ZGT [Nicotiana tabacum] GI:14210079 7 2 22 1 At5g15480 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 7 2 22 2 At5g15630 "phytochelatin synthetase family protein / COBRA cell expansion protein COBL4 similar to phytochelatin synthetase [Hordeum vulgare subsp. vulgare] GI:29570314; identified in Roudier, et al, Plant Phys. (2002) 130:538-548 (PMID:12376623); contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region" 7 2 22 3 At5g15690 hypothetical protein very low similarity to MtN20 [Medicago truncatula] GI:2598591 7 2 22 4 At5g18330 U-box domain-containing protein weak similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582198; contains Pfam profile PF04564: U-box domain 7 2 22 5 At5g18390 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 2 22 6 At5g18525 "WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat" 7 2 22 7 At5g18580 tonneau 2 (TON2) identical to tonneau 2 protein (TON2) GI:11494362 from [Arabidopsis thaliana]; contains Pfam profile: PF00036 EF hand 7 2 22 8 At5g18710 hypothetical protein predicted proteins - Arabidopsis thaliana 7 2 22 9 At5g18770 F-box family protein contains F-box domain Pfam:PF00646 7 2 22 10 At5g18920 expressed protein 7 2 22 11 At5g18960 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282" 7 2 22 12 At5g22290 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain 7 2 22 13 At5g22350 expressed protein 7 2 22 14 At5g22520 expressed protein 7 2 22 15 At5g22555 expressed protein 7 2 22 16 At5g22710 expressed protein 7 2 22 17 At5g22770 "adaptin family protein similar to SP|P18484 adaptor-related protein complex 2 alpha 2 subunit (Alpha-adaptin C) (Clathrin assembly protein complex 2 alpha-C large chain) {Rattus norvegicus}; contains Pfam profiles PF01602 Adaptin N terminal region, PF02883 Adaptin C-terminal domain" 7 2 22 18 At5g22920 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles:PF05495 CHY zinc finger, PF00097 zinc finger, C3HC4 type (RING finger)" 7 2 22 19 At5g22980 "serine carboxypeptidase III, putative similar to serine carboxypeptidase III from Oryza sativa SP|P37891, Matricaria chamomilla GI:6960455, Hordeum vulgare SP|P21529, Triticum aestivum SP|P11515; contains Pfam profile PF0450 serine carboxypeptidase" 7 2 22 20 At5g25570 expressed protein 7 2 22 21 At5g25620 "flavin-containing monooxygenase, putative / FMO, putative similar to flavin-containing monooxygenases from Arabidopsis thaliana YUCCA2 GI:16555354, YUCCA3 GI:16555356; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 7 2 22 22 At5g25860 F-box family protein contains F-box domain Pfam:PF00646 7 2 22 23 At5g25920 hypothetical protein 7 2 22 24 At5g26070 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; similar to root nodule extensin [Pisum sativum] gi|15021750|gb|AAK77902; Common family members: At5g19800, At5g57070, At1g72790 [Arabidopsis thaliana]" 7 2 22 25 At5g26130 "pathogenesis-related protein, putative similar to PR-1a protein [Nicotiana tabacum] GI:19944; contains Pfam profile PF00188: SCP-like extracellular protein" 7 2 23 1 At5g26290 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 7 2 23 2 At5g26350 hypothetical protein 7 2 23 3 At5g32470 expressed protein 7 2 23 4 At5g32613 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 7 2 23 5 At5g33370 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 7 2 23 6 At5g33715 hypothetical protein 7 2 23 7 At5g34883 expressed protein 7 2 23 8 At5g34910 hypothetical protein 7 2 23 9 At5g35160 "endomembrane protein 70, putative p76, Homo sapiens, EMBL:HSU81006" 7 2 23 10 At5g35210 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease 7 2 23 11 At5g38370 hypothetical protein 7 2 23 12 At5g38400 hypothetical protein 7 2 23 13 At5g38570 F-box family protein contains F-box domain Pfam:PF00646 7 2 23 14 At5g38620 MADS-box protein (AGL73) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 7 2 23 15 At5g38800 bZIP transcription factor family protein similar to bZIP transcription factor GI:1769891 from [Arabidopsis thaliana]; contains PFAM profile: bZIP transcription factor PF00170 7 2 23 16 At5g38860 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 2 23 17 At5g39020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 2 23 18 At5g39100 "germin-like protein (GLP6) nearly identical to SP|P92997 Germin-like protein subfamily 1 member 13 precursor {Arabidopsis thaliana}; exon 2 interrupted by a stop codon, creating non-consensus donor and acceptor splice sites." 7 2 23 19 At5g41940 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 7 2 23 20 At5g42000 ORMDL family protein contains Pfam domain PF04061: ORMDL family 7 2 23 21 At5g42140 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 7 2 23 22 At5g42200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 2 23 23 At5g42360 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 2 23 24 At5g42420 "transporter-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593" 7 2 23 25 At5g42610 "hypothetical protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 7 2 24 1 At5g42655 expressed protein 7 2 24 2 At5g45220 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 7 2 24 3 At5g45275 expressed protein Requires functional assignment. 7 2 24 4 At5g45390 ATP-dependent Clp protease proteolytic subunit (ClpP4) identical to nClpP4 GI:5360593 from [Arabidopsis thaliana] 7 2 24 5 At5g45450 iron transporter-related low similarity to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865 7 2 24 6 At5g45610 expressed protein 7 2 24 7 At5g45650 "subtilase family protein contains Pfam domain, PF00082: Subtilase family; contains Pfam domain, PF02225: protease associated (PA) domain" 7 2 24 8 At5g45790 expressed protein ; expression supported by MPSS 7 2 24 9 At5g45850 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 7 2 24 10 At5g48440 FAD-dependent oxidoreductase family protein low similarity to hydrogen cyanide synthase HcnC from Pseudomonas fluorescens [GI:3220203]; contains Pfam profile PF01266 FAD dependent oxidoreductase 7 2 24 11 At5g48490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 2 24 12 At5g48650 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein 7 2 24 13 At5g48660 expressed protein ; expression supported by MPSS 7 2 24 14 At5g48840 "pantoate-beta-alanine ligase, putative similar to pantoate--beta-alanine ligase [Lotus japonicus] GI:2292921; contains Pfam profile PF02569: pantoate--beta-alanine ligase" 7 2 24 15 At5g48900 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa]; non-consensus AG donor splice site at exon 2 7 2 24 16 At5g49050 hypothetical protein 7 2 24 17 At5g49110 expressed protein ; expression supported by MPSS 7 2 24 18 At5g51830 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 7 2 24 19 At5g51870 MADS-box protein (AGL71) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 7 2 24 20 At5g52040 arginine/serine-rich splicing factor RSP41 (RSP41) nearly identical to SP|P92966 Arginine/serine-rich splicing factor RSP41 {Arabidopsis thaliana} 7 2 24 21 At5g52090 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 7 2 24 22 At5g52260 myb family transcription factor (MYB19) contains PFAM profile: Myb DNA binding domain PF00249 7 2 24 23 At5g52320 "cytochrome P450, putative " 7 2 24 24 At5g52500 expressed protein strong similarity to unknown protein (emb|CAB68146.1) 7 2 24 25 At5g52547 expressed protein 7 2 25 1 At5g55200 "co-chaperone grpE protein, putative similar to chaperone GrpE type 2 [Nicotiana tabacum] GI:3851640; contains Pfam profile PF01025: co-chaperone GrpE" 7 2 25 2 At5g55260 serine/threonine protein phosphatase PP-X isozyme 2 (PPX2) identical to SP|P48528 Serine/threonine protein phosphatase PP-X isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 7 2 25 3 At5g55440 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 7 2 25 4 At5g55500 "beta-(1,2)-xylosyltransferase (XYLT) identical to SP|Q9LDH0" 7 2 25 5 At5g55630 "outward rectifying potassium channel (KCO1) identical to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158 of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 7 2 25 6 At5g55690 MADS-box protein (AGL47) 7 2 25 7 At5g55860 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS 7 2 25 8 At5g55920 "nucleolar protein, putative similar to SP|P46087 Proliferating-cell nucleolar antigen p120 (Proliferation-associated nucleolar protein p120) {Homo sapiens}, SP|P40991 Nucleolar protein NOP2 {Saccharomyces cerevisiae}; contains Pfam profile PF01189: NOL1/NOP2/sun family" 7 2 25 9 At5g58540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 7 2 25 10 At5g58575 expressed protein 7 2 25 11 At5g58730 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 7 2 25 12 At5g58782 "dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative similar to GI:796076" 7 2 25 13 At5g58950 "protein kinase family protein concontains protein kinase domain, Pfam:PF00069" 7 2 25 14 At5g58990 expressed protein 7 2 25 15 At5g59140 "SKP1 family protein similar to elongin C, Drosophila melanogaster, GI:2780365 PIR:JC5794; contains Pfam profile PF01466: Skp1 family, dimerisation domain" 7 2 25 16 At5g59180 DNA-directed RNA polymerase II identical to Swiss-Prot:P38421 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) [Arabidopsis thaliana] 7 2 25 17 At5g61790 "calnexin 1 (CNX1) identical to calnexin homolog 1, Arabidopsis thaliana, EMBL:AT08315 [SP|P29402]" 7 2 25 18 At5g61850 "floral meristem identity control protein LEAFY (LFY) identical to PIR|B38104 LFY floral meristem identity control protein, splice form 2 - Arabidopsis thaliana; contains Pfam profile PF01698: Floricaula / Leafy protein" 7 2 25 19 At5g62040 brother of FT and TFL1 protein (BFT) identical to SP|Q9FIT4 BROTHER of FT and TFL1 protein {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 7 2 25 20 At5g62100 "BAG domain-containing protein similar to BAG domain containing proteins (At5g07220, At5g52060)" 7 2 25 21 At5g62250 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 7 2 25 22 At5g62310 "incomplete root hair elongation (IRE) / protein kinase, putative nearly identical to IRE (incomplete root hair elongation) [Arabidopsis thaliana] gi|6729346|dbj|BAA89783" 7 2 25 23 At5g62480 "glutathione S-transferase, putative " 7 2 25 24 At5g62530 delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) identical to delta-1-pyrroline-5-carboxylate dehydrogenase precursor [Arabidopsis thaliana] gi|15383744|gb|AAK73756; identical to cDNA delta-1-pyrroline-5-carboxylate dehydrogenase precursor (P5CDH) nuclear gene for mitochondrial product GI:15383743; contains Pfam profile PF00171:aldehyde dehydrogenase (NAD) family protein 7 2 25 25 At5g65070 MADS-box protein (MAF4) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam profile PF01486: K-box region 7 2 26 1 At5g65130 "AP2 domain-containing transcription factor, putative similar to AP2 domain transcription factor" 7 2 26 2 At5g65270 Ras-related GTP-binding family protein similar to GTP-binding protein RAB11A GI:1370142 from [Lotus japonicus]; contains Pfam profile: PF00071 Ras family 7 2 26 3 At5g65330 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL78 7 2 26 4 At5g65490 expressed protein similar to unknown protein (dbj BAA75199.1) 7 2 26 5 At5g65540 expressed protein 7 2 26 6 At5g65685 "soluble glycogen synthase-related contains weak similarity to Soluble glycogen synthase, chloroplast precursor (EC 2.4.1.11) (SS III) (Swiss-Prot:Q43846) [Solanum tuberosum]" 7 2 26 7 At5g65750 "2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to SP|P20967 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) {Saccharomyces cerevisiae}; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF00676: Dehydrogenase E1 component" 7 2 26 8 ath-MIR165a miRNA gene Arabidopsis thaliana miR165a stem-loop 7 2 26 9 ath-MIR396b miRNA gene Arabidopsis thaliana miR396b stem-loop 7 2 26 10 ath-MIR169j miRNA gene Arabidopsis thaliana miR169j stem-loop 7 2 26 11 ath-MIR395b miRNA gene Arabidopsis thaliana miR395b stem-loop 7 2 26 12 3xSSC 3xSSC 7 2 26 13 3xSSC 3xSSC 7 2 26 14 3xSSC 3xSSC 7 2 26 15 3xSSC 3xSSC 7 2 26 16 At3g44710 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 7 2 26 17 At3g44740 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|O23627 Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis thaliana}; contains Pfam profile PF00587: tRNA synthetase class II core domain (G, H, P, S and T)" 7 2 26 18 At3g44890 "50S ribosomal protein L9, chloroplast (CL9) contains Pfam profile PF03948: Ribosomal protein L9, C-terminal domain; contains Pfam profile PF01281: ribosomal protein L9, N-terminal domain; contains TIGRfam profile TIGR00158: ribosomal protein L9" 7 2 26 19 At3g44940 expressed protein 7 2 26 20 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 7 2 26 21 At3g45150 "TCP family transcription factor, putative similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440) Oryza sativa] ; auxin-induced basic helix-loop-helix transcription factor - Gossypium hirsutum, EMBL:AF165924" 7 2 26 22 At3g45360 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 7 2 26 23 At3g45420 "lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, Prosite:PS00108" 7 2 26 24 Blank Blank 7 2 26 25 Blank Blank 7 3 1 1 atc02 Randomly generated negative control 7 3 1 2 atc08 Randomly generated negative control 7 3 1 3 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 7 3 1 4 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 7 3 1 5 Alien4 Control: Stratagene Spotreport Alien Oligo 7 3 1 6 Alien10 Control: Stratagene Spotreport Alien Oligo 7 3 1 7 atc06 Randomly generated negative control 7 3 1 8 atc12 Randomly generated negative control 7 3 1 9 At1g02020 nitroreductase family protein contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide 7 3 1 10 At1g02065 squamosa promoter-binding protein-like 8 (SPL8) identical to squamosa promoter binding protein-like 8 [Arabidopsis thaliana] GI:5931679; contains Pfam profile PF03110: SBP domain 7 3 1 11 At1g02180 ferredoxin-related similar to Ferredoxin. (SP:O78510) [Cryptomonas phi] {Guillardia theta} 7 3 1 12 At1g02210 regulator of shoot apical meristem-related contains weak similarity to no apical meristem NAM (GI:1279640) [Petunia x hybrida] 7 3 1 13 At1g02390 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase 7 3 1 14 At1g02440 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor GB:AAA32729 GI:166586 from (Arabidopsis thaliana)" 7 3 1 15 At1g02630 "equilibrative nucleoside transporter, putative (ENT8) identical to putative equilibrative nucleoside transporter ENT8 [Arabidopsis thaliana] GI:28207664; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter" 7 3 1 16 At1g02690 "importin alpha-2 subunit, putative similar to importin alpha-2 subunit (Karyopherin alpha-2 subunit) (KAP alpha) SP:O04294 from [Arabidopsis thaliana]" 7 3 1 17 At1g05280 fringe-related protein Similar to hypothetical protein PID|e327464 (gb|Z97338) various hypothetical proteins from Arabidopsis thaliana strong similarity to unknown protein (pir||T13026) similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 7 3 1 18 At1g05330 expressed protein ; expression supported by MPSS 7 3 1 19 At1g05490 C protein immunoglobulin-A-binding beta antigen-related contains weak similarity to C protein immunoglobulin-A-binding beta antigen [Streptococcus agalactiae] gi|18028989|gb|AAL56250 7 3 1 20 At1g05550 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 7 3 1 21 At1g05700 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase, gi|2129635; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 7 3 1 22 At1g05740 hypothetical protein contains Pfam PF05811: Eukaryotic protein of unknown function (DUF842) 7 3 1 23 At1g05870 expressed protein 7 3 1 24 At1g05910 "cell division cycle protein 48-related / CDC48-related similar to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF00439: Bromodomain" 7 3 1 25 At1g08430 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 7 3 2 1 At1g08480 expressed protein 7 3 2 2 At1g08660 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 7 3 2 3 At1g08680 ARF GAP-like zinc finger-containing protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like zinc finger-containing protein ZiGA4 GI:10441354 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 7 3 2 4 At1g08820 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 7 3 2 5 At1g08890 "sugar transporter family protein similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 7 3 2 6 At1g09050 expressed protein 7 3 2 7 At1g09130 "ATP-dependent Clp protease proteolytic subunit, putative similar to nClpP5 GI:5360595 from [Arabidopsis thaliana]" 7 3 2 8 At1g11690 hypothetical protein 7 3 2 9 At1g11750 "ATP-dependent Clp protease proteolytic subunit (ClpP) identical to ATP-dependent Clp protease proteolytic subunit GI:2827888 from [Arabidopsis thaliana]; contains Pfam profile PF00574: Clp protease; contains TIGRfam profile TIGR00493: ATP-dependent Clp protease, proteolytic subunit ClpP" 7 3 2 10 At1g11890 "vesicle transport protein SEC22, putative identified as SEC22 by Raikhel, NV, et al. in Plant Physiol. 124: 1558-69 (2000); similar to vesicle trafficking protein gb|U91538 from Mus musculus; ESTs gb|F15494 and gb|F14097 come from this gene" 7 3 2 11 At1g11925 "stigma-specific Stig1 family protein contains Pfam profile PF04885: Stigma-specific protein, Stig1" 7 3 2 12 At1g12080 expressed protein 7 3 2 13 At1g12120 expressed protein contains Pfam domain PF05904: Plant protein of unknown function (DUF863) 7 3 2 14 At1g12300 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 3 2 15 At1g12360 "cytokinesis-related Sec1 protein (KEULE) similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family" 7 3 2 16 At1g15120 "ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative similar to SP|P48504 Ubiquinol-cytochrome C reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7) {Solanum tuberosum}; contains Pfam profile PF02320: Ubiquinol-cytochrome C reductase hinge protein" 7 3 2 17 At1g15150 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 7 3 2 18 At1g15270 "expressed protein ESTs gb|AA650895, gb|AA720043 and gb|R29777 come from this gene" 7 3 2 19 At1g15340 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 7 3 2 20 At1g15440 "transducin family protein / WD-40 repeat family protein Strong similarity to gb X95263 Periodic tryptophan protein 2 gene (PWP2) from Homo sapiens and contains 6 WD40, G-beta repeat domains" 7 3 2 21 At1g15510 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 3 2 22 At1g15710 prephenate dehydrogenase family protein contains Pfam profile: PF02153 prephenate dehydrogenase 7 3 2 23 At1g15770 expressed protein 7 3 2 24 At1g18530 "calmodulin, putative similar to calmodulin GI:1565285 from [Toxoplasma gondii]" 7 3 2 25 At1g18590 sulfotransferase family protein similar to SP|P52837 Flavonol 4'-sulfotransferase (EC 2.8.2.-) (F4-ST) {Flaveria chloraefolia}; contains Pfam profile PF00685: Sulfotransferase domain 7 3 3 1 At1g18760 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 3 2 At1g18830 transducin family protein / WD-40 repeat family protein similar to Sec31p (GI:13928450) {Oryza sativa} 7 3 3 3 At1g19000 myb family transcription factor similar to MybSt1 GI:7705206 from [Solanum tuberosum] 7 3 3 4 At1g19030 hypothetical protein 7 3 3 5 At1g19180 expressed protein 7 3 3 6 At1g19240 expressed protein 7 3 3 7 At1g22140 expressed protein 7 3 3 8 At1g22200 expressed protein 7 3 3 9 At1g22310 "DNA-binding protein-related contains Pfam profiles PF02178: AT hook motif, PF01429: Methyl-CpG binding domain" 7 3 3 10 At1g22370 UDP-glucoronosyl/UDP-glucosyl transferase family protein glycosyltransferase family 7 3 3 11 At1g22550 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 7 3 3 12 At1g22610 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 7 3 3 13 At1g22760 polyadenylate-binding protein 3 (PABP3) 7 3 3 14 At1g22830 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat. Gene continues on the 3' end of BAC F19G10 gb|AF000657 gene F19G10.21 7 3 3 15 At1g26370 "RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 7 3 3 16 At1g26440 expressed protein similar to SP|Q41706 A3 protein (unknown function) {Vigna unguiculata} 7 3 3 17 At1g26620 expressed protein ; expression supported by MPSS 7 3 3 18 At1g26665 expressed protein 7 3 3 19 At1g26799 expressed protein 7 3 3 20 At1g26850 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 7 3 3 21 At1g27050 homeobox-leucine zipper family protein contains Pfam profile:PF00046 Homeobox domain and Pfam profile:PF00076 RNA recognition motif 7 3 3 22 At1g27110 hypothetical protein 7 3 3 23 At1g29965 60S ribosomal protein L18A (RPL18aA) JRW 7 3 3 24 At1g30010 "intron maturase, type II family protein similar to SP|Q57005 Group II intron-encoded protein ltrA {Lactococcus lactis subsp}; contains Pfam profiles PF01348: Type II intron maturase, PF00078: Reverse transcriptase (RNA-dependent DNA polymerase" 7 3 3 25 At1g30190 expressed protein ; expression supported by MPSS 7 3 4 1 At1g30250 expressed protein 7 3 4 2 At1g30470 SIT4 phosphatase-associated family protein contains similarity to copper chaperone homolog CCH GB:AAF15286 GI:6525011 from [Glycine max]; contains Pfam profile PF04499: SIT4 phosphatase-associated protein 7 3 4 3 At1g30500 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) 7 3 4 4 At1g30660 toprim domain-containing protein contains Pfam profile PF01751: Toprim domain 7 3 4 5 At1g30720 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 7 3 4 6 At1g33750 terpene synthase/cyclase family protein similar to DELTA-CADINENE SYNTHASE ISOZYME A GB:Q43714 from [Gossypium arboreum] 7 3 4 7 At1g33810 expressed protein 7 3 4 8 At1g33980 Smg-4/UPF3 family protein contains Pfam PF03467: Smg-4/UPF3 family; similar to hUPF3B (GI:12232324) [Homo sapiens] 7 3 4 9 At1g34020 "transporter-related low similarity to UDP-sugar transporter [Drosophila melanogaster] GI:14971008, UDP-glucuronic acid transporter [Homo sapiens] GI:11463949" 7 3 4 10 At1g34200 "oxidoreductase family protein similar to AX110P [Daucus carota] GI:285739; contains Pfam profiles PF01408: Oxidoreductase family NAD-binding Rossmann fold, PF02894: Oxidoreductase family C-terminal alpha/beta domain" 7 3 4 11 At1g34280 hypothetical protein 7 3 4 12 At1g34440 hypothetical protein 7 3 4 13 At1g34510 "peroxidase, putative similar to peroxidase ATP13a GB:CAA67312 from [Arabidopsis thaliana]" 7 3 4 14 At1g44750 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 7 3 4 15 At1g44810 "expressed protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 7 3 4 16 At1g45000 "26S proteasome regulatory complex subunit p42D, putative similar to 26S proteasome regulatory complex subunit p42D [Drosophila melanogaster] gi|6434958|gb|AAF08391" 7 3 4 17 At1g45100 "polyadenylate-binding protein, putative / PABP, putative similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP|P42731, [Nicotiana tabacum] GI:7673355, [Cucumis sativus] GI:7528270; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 7 3 4 18 At1g45230 defective chloroplasts and leaves protein-related / DCL protein-related similar to defective chloroplasts and leaves (DCL) protein SP:Q42463 from [Lycopersicon esculentum] 7 3 4 19 At1g45616 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 7 3 4 20 At1g47230 "cyclin, putative similar to cyclin A-like protein [Nicotiana tabacum] GI:1064931, A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 7 3 4 21 At1g47270 "F-box family protein / tubby family protein contains Pfam profiles: PF00646 F-box domain, PF01167 Tub family; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein Length(GI:6730158) [Mus musculus]; similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Tubby protein homolog (Swiss-Prot:O88808) [Rattus norvegicus]" 7 3 4 22 At1g50200 "aminoacyl-tRNA synthetase family protein contains Pfam profiles: PF01411 tRNA synthetases class II (A), PF02272 DHHA1 domain" 7 3 4 23 At1g50270 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 3 4 24 At1g50460 "hexokinase, putative similar to hexokinase 1 [Spinacia oleracea] Swiss-Prot:Q9SEK3" 7 3 4 25 At1g50520 cytochrome P450 family protein similar to CYTOCHROME P450 93A3 GB:O81973 from [Glycine max] 7 3 5 1 At1g50710 expressed protein 7 3 5 2 At1g50770 hypothetical protein 7 3 5 3 At1g50980 F-box family protein contains F-box domain Pfam:PF00646 7 3 5 4 At1g51055 hypothetical protein 7 3 5 5 At1g53690 "DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative similar to SP|P53803 DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide (EC 2.7.7.6) (ABC10-alpha) (RPB7.0) (RPB10alpha) {Homo sapiens}; contains Pfam profile PF03604: DNA directed RNA polymerase, 7 kDa subunit" 7 3 5 6 At1g53750 26S proteasome AAA-ATPase subunit (RPT1a) similar to 26S proteasome ATPase subunit GI:1395190 from [Spinacia oleracea] 7 3 5 7 At1g53910 AP2 domain-containing protein RAP2.12 (RAP2.12) identical to AP2 domain containing protein GI:2281649 from [Arabidopsis thaliana] 7 3 5 8 At1g53970 hypothetical protein 7 3 5 9 At1g54095 expressed protein 7 3 5 10 At1g54140 "transcription initiation factor IID (TFIID) 31 kDa subunit (TAFII-31) family protein contains Pfam profile: PF02291 transcription initiation factor IID, 31kD subunit" 7 3 5 11 At1g54300 hypothetical protein 7 3 5 12 At1g54340 "isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative strong similarity to NADP-isocitrate dehydrogenase GI:5764653 from [Citrus limon]; Nicotiana tabacum SP|P50218" 7 3 5 13 At1g57980 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 7 3 5 14 At1g58070 expressed protein 7 3 5 15 At1g58242 hypothetical protein 7 3 5 16 At1g58280 expressed protein 7 3 5 17 At1g58450 "peptidyl-prolyl cis-trans isomerase FKBP-type family protein similar to rof1 from (Arabidopsis thaliana) GI:1373396, GI:1354207; contains Pfam profile PF00515 TPR Domain" 7 3 5 18 At1g58643 hypothetical protein 7 3 5 19 At1g59535 hypothetical protein identical to hypothetical protein GI:8778767 from (Arabidopsis thaliana) 7 3 5 20 At1g59580 "mitogen-activated protein kinase, putative / MAPK, putative (MPK2) identical to mitogen-activated protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana] SWISS-PROT:Q39022; PMID:12119167" 7 3 5 21 At1g62510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 3 5 22 At1g62580 flavin-containing monooxygenase family protein / FMO family protein low similarity to SP|P97501 Dimethylaniline monooxygenase [N-oxide forming] 3 (EC 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) {Mus musculus}; contains Pfam profile PF00743 Flavin-binding monooxygenase-like domain 7 3 5 23 At1g62750 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] 7 3 5 24 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 3 5 25 At1g62935 hypothetical protein 7 3 6 1 At1g62980 "expansin, putative (EXP18) identical to SWISS-PROT:Q9LQ07 alpha-expansin 18 precursor (At-EXP18)[Arabidopsis thaliana]; alpha-expansin gene family, PMID:11641069" 7 3 6 2 At1g63140 "O-methyltransferase, putative similar to GI:2781394" 7 3 6 3 At1g63190 hypothetical protein 7 3 6 4 At1g65920 "regulator of chromosome condensation (RCC1) family protein / zinc finger protein-related contains Pfam profiles: regulator of chromosome condensation (RCC1), PF01363 FYVE zinc finger" 7 3 6 5 At1g65985 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 7 3 6 6 At1g66150 "leucine-rich repeat protein kinase, putative (TMK1) identical to protein kinase TMK1 gi|166888|gb|AAA32876, SP|P43298 Putative receptor protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis thaliana}" 7 3 6 7 At1g66190 expressed protein ; expression supported by MPSS 7 3 6 8 At1g66350 "gibberellin regulatory protein (RGL1) similar to GB:CAA75492 from [Arabidopsis thaliana]; contains Pfam profile PF03514: GRAS family transcription factor; identical to cDNA RGL1 protein GI:15777856, RGL1 protein [Arabidopsis thaliana] GI:15777857" 7 3 6 9 At1g66410 calmodulin-1/4 (CAM4) identical to calmodulin [Arabidopsis thaliana] GI:16223; nearly identical to SP|P25854 Calmodulin-1/4 {Arabidopsis thaliana} 7 3 6 10 At1g66580 60S ribosomal protein L10 (RPL10C) contains Pfam profile: PF00826: Ribosomal L10 7 3 6 11 At1g66630 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 7 3 6 12 At1g69310 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 7 3 6 13 At1g69350 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535: PPR repeat 7 3 6 14 At1g69500 cytochrome P450 family protein similar to Cytochrome P450 86A2 (SP:O23066) [Arabidopsis thaliana]contains Pfam profile: PF00067: Cytochrome P450 7 3 6 15 At1g69526 "UbiE/COQ5 methyltransferase family protein low similarity to SP|Q05197 Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17) [Rhodopseudomonas sphaeroides] {Rhodobacter sphaeroides}; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 7 3 6 16 At1g69690 "TCP family transcription factor, putative similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440) Oryza sativa]" 7 3 6 17 At1g69750 cox19 family protein contains Pfam profile PF05490: Cox19 protein 7 3 6 18 At1g69930 "glutathione S-transferase, putative similar to glutathione transferase GB:CAA09188 [Alopecurus myosuroides]" 7 3 6 19 At1g69990 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor-like protein kinase GI:8777368 from [Arabidopsis thaliana]" 7 3 6 20 At1g72800 nuM1-related contains similarity with nuM1 GI:1279563 from [Medicago sativa] 7 3 6 21 At1g72840 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 3 6 22 At1g73020 "expressed protein contains Pfam profile PF04547: Protein of unknown function, DUF590; expression supported by MPSS" 7 3 6 23 At1g73090 expressed protein 7 3 6 24 At1g73230 nascent polypeptide-associated complex (NAC) domain-containing protein similar to SP|P20290 Transcription factor BTF3 (RNA polymerase B transcription factor 3) {Homo sapiens}; contains Pfam profile PF01849: NAC domain 7 3 6 25 At1g73290 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare]; glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase; 7 3 7 1 At1g73460 protein kinase family protein contains protein kinase domain Pfam:PF00069 7 3 7 2 At1g73510 hypothetical protein 7 3 7 3 AT5G57480 PC-1 C06 7 3 7 4 3XSSC PC-1 C18 7 3 7 5 AT1G29930 PC-1 G06 7 3 7 6 3XSSC PC-1 G18 7 3 7 7 AT3G44150 PC-1 K06 7 3 7 8 3XSSC PC-1 K18 7 3 7 9 AT4G00810 PC-1 O06 7 3 7 10 3XSSC PC-1 O18 7 3 7 11 At1g76360 "protein kinase, putative similar to protein kinase APK1B, SWISS-PROT:P46573; contains protein kinase domain, Pfam:PF00069" 7 3 7 12 At1g76405 expressed protein 7 3 7 13 At1g76520 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 7 3 7 14 At1g76580 SPL1-Related3 protein (SPL1R3) identical to cDNA partial mRNA for SPL1-Related3 protein (SPL1R3 gene) GI:6006428 7 3 7 15 At1g76750 hypothetical protein 7 3 7 16 At1g76810 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 7 3 7 17 At1g76940 "RNA recognition motif (RRM)-containing protein contains Pfam PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); similar to RNA-binding protein with multiple splicing homolog (RBP-MS) (HEart, RRM Expressed Sequence) (Hermes) (Swiss-Prot:Q9YGI5) [Xenopus laevis]; similar to RNA-binding protein with multiple splicing (RBP-MS) (Swiss-Prot:Q93062) [Homo sapiens]" 7 3 7 18 At1g76980 expressed protein 7 3 7 19 At1g79630 protein phosphatase 2C family protein / PP2C family protein contains Pfam PF00481 : Protein phosphatase 2C domain; similar to protein phosphatase-2C GI:3643088 from [Mesembryanthemum crystallinum] 7 3 7 20 At1g79670 "wall-associated kinase, putative similar to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]; isoform contains non-consensus AT-acceptor splice site." 7 3 7 21 At1g79810 "Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: zinc finger C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino terminal region" 7 3 7 22 At1g79860 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 7 3 7 23 At1g79975 expressed protein 7 3 7 24 At1g80040 expressed protein 7 3 7 25 At1g80200 expressed protein ; expression supported by MPSS 7 3 8 1 At1g80245 expressed protein 7 3 8 2 At2g03110 KH domain-containing protein 7 3 8 3 At2g03170 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At14), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1b GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 7 3 8 4 At2g03350 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 7 3 8 5 At2g03420 expressed protein 7 3 8 6 At2g03590 expressed protein similar to SP|Q41706 A3 protein (unknown function) {Vigna unguiculata} 7 3 8 7 At2g03670 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 7 3 8 8 At2g03840 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 7 3 8 9 At2g03890 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 7 3 8 10 At2g07722 hypothetical protein 7 3 8 11 At2g07787 expressed protein 7 3 8 12 At2g09900 hypothetical protein 7 3 8 13 At2g10070 expressed protein very low similarity to AHM1 [Triticum aestivum] GI:6691467 7 3 8 14 At2g10470 cytochrome P-450 aromatase-related similar to minor outer capsid protein VP4 (GI:13446784) [Human rotavirus C]; similar to cytochrome P-450 aromatase (GI:21170) [Gallus gallus]; 7 3 8 15 At2g10608 hypothetical protein 7 3 8 16 At2g11135 expressed protein 7 3 8 17 At2g11405 hypothetical protein 7 3 8 18 At2g16340 hypothetical protein 7 3 8 19 At2g16400 homeodomain-containing protein 7 3 8 20 At2g16570 amidophosphoribosyltransferase / glutamine phosphoribosylpyrophosphate amidotransferase / phosphoribosyldiphosphate 5-amidotransferase identical to amidophosphoribosyltransferase [Arabidopsis thaliana] GI:469193; identical to cDNA amidophosphoribosyltransferase GI:469192 7 3 8 21 At2g16620 protein kinase-related contains similarity to protein kinases 7 3 8 22 At2g16820 hypothetical protein 7 3 8 23 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 7 3 8 24 At2g17030 F-box family protein similar to hypothetical protein GB:AAB81667 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 7 3 8 25 At2g17055 disease resistance protein-related 7 3 9 1 At2g19900 "malate oxidoreductase, putative similar to NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (SP:P51615) {Vitis vinifera}" 7 3 9 2 At2g19940 "semialdehyde dehydrogenase family protein similar to N-acetyl-glutamyl-phosphate reductase [Campylobacter jejuni] GI:6650362; contains Pfam profiles PF02774: Semialdehyde dehydrogenase dimerisation domain, PF01118: Semialdehyde dehydrogenase NAD binding domain" 7 3 9 3 At2g20110 "tesmin/TSO1-like CXC domain-containing protein similar to SP|Q9WTJ6 Tesmin (Metallothionein-like 5, testis-specific) {Mus musculus}; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain" 7 3 9 4 At2g20150 expressed protein and genefinder 7 3 9 5 At2g20350 "AP2 domain-containing transcription factor, putative pFAM domain (PF00847)" 7 3 9 6 At2g20410 activating signal cointegrator-related similar to ASC-1 (GI:6581062) [Mus musculus]; similar to Activating signal cointegrator 1 (ASC-1) (Thyroid receptor interacting protein 4) (TRIP-4) (Swiss-Prot:Q15650) [Homo sapiens] 7 3 9 7 At2g20570 golden2-like transcription factor (GLK1) identical to golden2-like transcription factor GI:13311003 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 Myb-like DNA-binding domain 7 3 9 8 At2g20595 expressed protein 7 3 9 9 At2g23240 plant EC metallothionein-like family 15 protein identical to EC protein homolog 2 (SP:Q42377) {Arabidopsis thaliana}; identical to an EST: GB:X92116:ATECPRHOM; contains a vertebrate metallothionein signature (PS00203); contains Pfam profile PF02068: Plant PEC family metallothionein 7 3 9 10 At2g23300 "leucine-rich repeat transmembrane protein kinase, putative " 7 3 9 11 At2g23480 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 7 3 9 12 At2g23550 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 3 9 13 At2g23730 expressed protein 7 3 9 14 At2g23780 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 7 3 9 15 At2g23970 "defense-related protein, putative similar to defense-related protein [Brassica carinata] GI:14009290" 7 3 9 16 At2g24000 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 7 3 9 17 At2g26860 F-box family protein contains F-box domain Pfam:PF00646 7 3 9 18 At2g26900 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 7 3 9 19 At2g27035 plastocyanin-like domain-containing protein low similarity to SP:P80728 Mavicyanin {Cucurbita pepo}; contains Pfam profile PF02298: Plastocyanin-like domain 7 3 9 20 At2g27080 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related contains 1 transmembrane domain; similar to hin1 homolog (GI:13122296) [Arabidopsis thaliana]; similar to hin1 (GI:22830759) [Nicotiana tabacum] 7 3 9 21 At2g27250 CLAVATA3 CLAVATA3/ESR-Related (CLE) family of proteins; ligand for CLV1; responsible for negative regulation of meristem cell differention and replacement 7 3 9 22 At2g27285 "expressed protein weak similarity to maebl (GI:20087019) [Plasmodium falciparum], chimeric erythrocyte-binding protein MAEBL (GI:22086284) [Plasmodium falciparum]" 7 3 9 23 At2g27420 "cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]" 7 3 9 24 At2g27460 "sec23/sec24 transport family protein weak similarity to SP|P53992 Protein transport protein Sec24C (SEC24-related protein C) {Homo sapiens}; contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger" 7 3 9 25 At2g30220 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 7 3 10 1 At2g30280 expressed protein 7 3 10 2 At2g30430 hypothetical protein 7 3 10 3 At2g30480 expressed protein 7 3 10 4 At2g30630 expressed protein similar to H1-1flk [Arabidopsis thaliana] GI:388260 7 3 10 5 At2g30680 expressed protein weak similarity to callose synthase 1 catalytic subunit [Arabidopsis thaliana] GI:13649388 7 3 10 6 At2g30830 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 7 3 10 7 At2g30890 "membrane protein, putative similar to membrane protein SDR2 (GI:1747306) [Mus musculus]" 7 3 10 8 At2g33480 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 7 3 10 9 At2g33520 expressed protein 7 3 10 10 At2g33700 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phosphatase-2C (PP2C) (GI:3643085) [Mesembryanthemum crystallinum]" 7 3 10 11 At2g33740 copper-binding protein (CUTA) identical to copper-binding protein CUTA GI:12963361 from [Arabidopsis thaliana]; contains Pfam profile: PF03091 CutA1 divalent ion tolerance protein 7 3 10 12 At2g33830 dormancy/auxin associated family protein contains Pfam profile: PF05564 dormancy/auxin associated protein 7 3 10 13 At2g33860 auxin-responsive factor (ARF3) / ETTIN protein (ETT) identical to ETTIN GB:AF007788 from [Arabidopsis thaliana] 7 3 10 14 At2g34090 expressed protein similar to GP|1301832|gnl|PID|e239862|Z71287 7 3 10 15 At2g34160 expressed protein 7 3 10 16 At2g36750 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 7 3 10 17 At2g36810 expressed protein 7 3 10 18 At2g36950 heavy-metal-associated domain-containing protein nearly identical to farnesylated protein ATFP2 [GI:4097545] Pfam profile PF00403: Heavy-metal-associated domain 7 3 10 19 At2g37000 "TCP family transcription factor, putative similar to TFPD (GI:6681577) [Arabidopsis thaliana]" 7 3 10 20 At2g37140 "terpene synthase/cyclase-related contains Pfam profile PF03936: Terpene synthase family, metal binding domain" 7 3 10 21 At2g37180 plasma membrane intrinsic protein 2C (PIP2C) / aquaporin PIP2.3 (PIP2.3) / water-stress induced tonoplast intrinsic protein (RD28) identical to plasma membrane intrinsic protein 2C SP:P30302 from [Arabidopsis thaliana] 7 3 10 22 At2g37340 "splicing factor RSZ33 (RSZ33) nearly identical to splicing factor RSZ33 [Arabidopsis thaliana] GI:9843663; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00098: Zinc knuckle" 7 3 10 23 At2g37400 chloroplast lumen common family protein very similar to GI:6729507 (At5g02590) and GI:7413648 (At3g53560) [Arabidopsis thaliana] 7 3 10 24 At2g40000 expressed protein 7 3 10 25 At2g40040 "defective chloroplasts and leaves protein-related / DCL protein-related similar to DCL protein, chloroplast precursor (Defective chloroplasts and leaves protein) (Swiss-Prot:Q42463) [Lycopersicon esculentum]" 7 3 11 1 At2g40140 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat" 7 3 11 2 At2g40200 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 3 11 3 At2g40360 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to block of proliferation protein Bop1 (GI:1679772) [Mus musculus] 7 3 11 4 At2g40410 "Ca(2+)-dependent nuclease, putative similar to Ca(2+)-dependent nuclease [Arabidopsis thaliana] GI:7684292" 7 3 11 5 At2g40550 expressed protein 7 3 11 6 At2g40610 "expansin, putative (EXP8) similar to expansin 2 GI:7025493 from [Zinnia elegans]; alpha-expansin gene family, PMID:11641069" 7 3 11 7 At2g43180 expressed protein 7 3 11 8 At2g43190 ribonuclease P family protein similar to Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4) (Swiss-Prot:O95707) [Homo sapiens] 7 3 11 9 At2g43370 "U1 small nuclear ribonucleoprotein 70 kDa, putative " 7 3 11 10 At2g43430 "hydroxyacylglutathione hydrolase, mitochondrial / glyoxalase II (GLX2-1) identical to SP|O24495 Hydroxyacylglutathione hydrolase, mitochondrial precursor (EC 3.1.2.6) (Glyoxalase II) (Glx II) {Arabidopsis thaliana}" 7 3 11 11 At2g43600 glycoside hydrolase family 19 protein similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus] 7 3 11 12 At2g43660 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 7 3 11 13 At2g43800 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 7 3 11 14 At2g43860 "polygalacturonase, putative / pectinase, putative similar to SP|P48979 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus persica}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 7 3 11 15 At2g46495 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 11 16 At2g46535 expressed protein 7 3 11 17 At2g46700 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase homolog MCK1 [Zea mays] gi|1839597|gb|AAB47181" 7 3 11 18 At2g46760 "FAD-binding domain-containing protein strong similarity to At1g32300, At2g46740, At2g46750, At5g56490; contains PF01565: FAD binding domain" 7 3 11 19 At2g46890 expressed protein 7 3 11 20 At2g46940 expressed protein 7 3 11 21 At2g47110 ubiquitin extension protein 6 (UBQ6) / 40S ribosomal protein S27A (RPS27aB) identical to GI:166936 7 3 11 22 At2g47160 anion exchange family protein contains some similarity to SWISS-PROT:P04919 anion transport protein (anion exchange protein 1) [Mouse] {Mus musculus} 7 3 11 23 At3g02470 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase 7 3 11 24 At3g02530 "chaperonin, putative similar to SWISS-PROT:P80317- T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 7 3 11 25 At3g02660 "tRNA synthetase class I (W and Y) family protein similar to SP|P00952 Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS) {Bacillus stearothermophilus}; contains Pfam profiles PF00579: tRNA synthetases class I (W and Y), PF01479: S4 domain" 7 3 12 1 At3g02720 DJ-1 family protein / protease-related similar to Intracellular Protease [Pyrococcus horikoshii] GI:11513902; contains Pfam profile: PF01965 ThiJ/PfpI family 7 3 12 2 At3g02880 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profiles: PF00069 Eukaryotic protein kinase domain, PF00560 Leucine Rich Repeat (5 copies)" 7 3 12 3 At3g02930 expressed protein ; expression supported by MPSS 7 3 12 4 At3g03110 "exportin 1, putative strong similarity to Exportin1 (XPO1) protein [Arabidopsis thaliana] GI:7671510; contains Pfam profile PF03810: Importin-beta N-terminal domain" 7 3 12 5 At3g03170 expressed protein 7 3 12 6 At3g05725 expressed protein 7 3 12 7 At3g05780 "Lon protease, putative similar to Lon protease homolog 2 SP:P93655" 7 3 12 8 At3g05940 expressed protein contains Pfam profile PF03619: Domain of unknown function 7 3 12 9 At3g05990 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] gi|9837280|gb|AAG00510" 7 3 12 10 At3g06110 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 7 3 12 11 At3g06160 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 7 3 12 12 At3g06330 "zinc finger (C3HC4-type RING finger) family protein contains InterPro Entry IPR001841 Zn-finger, RING ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 7 3 12 13 At3g06390 integral membrane family protein similar to hypothetical protein GB:CAB10339 [Arabidopsis thaliana]; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 7 3 12 14 At3g09320 zinc finger (DHHC type) family protein similar to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 7 3 12 15 At3g09380 hypothetical protein contains Pfam profile PF01883: Domain of unknown function 7 3 12 16 At3g09550 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 7 3 12 17 At3g09620 "DEAD/DEAH box helicase, putative similar to RNA helicase GB:A57514 GI:897915 from [Rattus norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 7 3 12 18 At3g09770 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 7 3 12 19 At3g09810 "isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative strong similarity to isocitrate dehydrogenase (NAD+) GB:CAA65502 GI:3021506 [Nicotiana tabacum]" 7 3 12 20 At3g09970 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 Calcineurin-like phosphoesterase 7 3 12 21 At3g10030 aspartate/glutamate/uridylate kinase family protein low similarity to SP|Q9Z5K8 Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) {Lactococcus lactis}; contains Pfam profile PF00696: Amino acid kinase family 7 3 12 22 At3g12410 hypothetical protein 7 3 12 23 At3g12470 expressed protein 7 3 12 24 At3g12640 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 7 3 12 25 At3g12690 "protein kinase, putative similar to viroid symptom modulation protein [Lycopersicon esculentum] gi|7672777|gb|AAF66637" 7 3 13 1 At3g12860 "nucleolar protein Nop56, putative similar to XNop56 protein [Xenopus laevis] GI:14799394; contains Pfam profile PF01798: Putative snoRNA binding domain" 7 3 13 2 At3g12920 expressed protein 7 3 13 3 At3g13060 expressed protein contains Pfam profile PF04146: YT521-B-like family 7 3 13 4 At3g13080 ABC transporter family protein almost identical to MRP-like ABC transporter GI:2316016 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter 7 3 13 5 At3g15410 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596; identical to leucine-rich repeat protein [Arabidopsis thaliana] gi|2760084|emb|CAA76000" 7 3 13 6 At3g15470 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 7 3 13 7 At3g15630 expressed protein 7 3 13 8 At3g15690 "biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana]" 7 3 13 9 At3g15850 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 7 3 13 10 At3g15890 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 3 13 11 At3g16050 "stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963; contains Pfam domain, PF01680: SOR/SNZ family" 7 3 13 12 At3g16110 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 7 3 13 13 At3g18770 expressed protein 7 3 13 14 At3g18800 expressed protein 7 3 13 15 At3g18950 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein GI:2739374 from [Arabidopsis thaliana]; no characterized homologs 7 3 13 16 At3g19010 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains similarity to flavonol synthase (FLS) from [Solanum tuberosum] SP|Q41452, {Petunia hybrida} SP|Q07512; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 7 3 13 17 At3g19160 adenylate isopentenyltransferase 8 / adenylate dimethylallyltransferase / cytokinin synthase (IPT8) identical to adenylate isopentenyltransferase (IPT8) [Arabidopsis thaliana] GI:14279068 7 3 13 18 At3g19220 expressed protein 7 3 13 19 At3g19390 "cysteine proteinase, putative / thiol protease, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 7 3 13 20 At3g19440 pseudouridine synthase family protein low similarity to SP|P23851 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 7 3 13 21 At3g22160 VQ motif-containing protein contains PF05678: VQ motif 7 3 13 22 At3g22220 "hAT dimerisation domain-containing protein contains Pfam profiles PF04937: Protein of unknown function (DUF 659), PF05699 hAT family dimerisation domain" 7 3 13 23 At3g22380 expressed protein 7 3 13 24 At3g22420 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 3 13 25 At3g22530 expressed protein contains Pfam profile:PF00011 HSP20:Hsp20/alpha crystallin family 7 3 14 1 At3g22590 "RNA pol II accessory factor Cdc73 family protein contains Pfam PF05179: RNA pol II accessory factor, Cdc73 family" 7 3 14 2 At3g22780 CXC domain protein (TSO1) identical to CXC domain protein TSO1 [Arabidopsis thaliana] GI:7767425 7 3 14 3 At3g22840 chlorophyll A-B binding family protein / early light-induced protein (ELIP) identical to early light-induced protein; ELIP [Arabidopsis thaliana] GI:1872544; contains Pfam profile: PF00504 chlorophyll A-B binding protein; identical to cDNA early light-induced protein GI:1872543 7 3 14 4 At3g25730 "AP2 domain-containing transcription factor, putative contains Pfam profile: PF00847 AP2 domain; similar to RAV1 (DNA-binding protein) GB:BAA34250 [Arabidopsis thaliana] (Nucleic Acids Res. 27 (2), 470-478 (1999))" 7 3 14 5 At3g25790 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 7 3 14 6 At3g25910 expressed protein 7 3 14 7 At3g25970 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 3 14 8 At3g26115 expressed protein 7 3 14 9 At3g26160 cytochrome P450 family protein similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana] 7 3 14 10 At3g26320 "cytochrome P450 71B36, putative (CYP71B36) identical to Cytochrome P450 71B36 (SP:Q9LIP4) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 7 3 14 11 At3g26380 glycosyl hydrolase family protein 27 / alpha-galactosidase family protein / melibiase family protein similar to alpha-galactosidase GI:10944326 from [Phanerochaete chrysosporium] 7 3 14 12 At3g29075 glycine-rich protein 7 3 14 13 At3g29140 hypothetical protein 7 3 14 14 At3g29260 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 7 3 14 15 At3g29300 hypothetical protein 7 3 14 16 At3g29430 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:413730; similar to geranylgeranyl pyrophosphate synthase, chloroplast precursor GB:P34802 from [Arabidopsis thaliana]" 7 3 14 17 At3g29580 hypothetical protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471 7 3 14 18 At3g29760 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 7 3 14 19 At3g29780 expressed protein 7 3 14 20 At3g43870 hypothetical protein 7 3 14 21 At3g43930 "expressed protein predicted proteins, Arabidopsis thaliana; expression supported by MPSS" 7 3 14 22 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 7 3 14 23 At3g44160 chloroplast outer membrane protein-related low similarity to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607 7 3 14 24 At3g44340 "sec23/sec24 transport family protein contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger" 7 3 14 25 At3g44430 expressed protein 7 3 15 1 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 7 3 15 2 At3g44660 histone deacetylase-related / HD-related similar to SP|O09106 Histone deacetylase 1 (HD1) {Mus musculus} 7 3 15 3 At3g47500 Dof-type zinc finger domain-containing protein identical to H-protein promoter binding factor-2a GI:3386546 from [Arabidopsis thaliana] 7 3 15 4 At3g47560 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 7 3 15 5 At3g47710 bHLH family protein 7 3 15 6 At3g47770 "ABC transporter family protein AbcA, Dictyostelium discoideum, U66526" 7 3 15 7 At3g47930 "L-galactono-1,4-lactone dehydrogenase, putative strong similarity to L-galactono-1,4-lactone dehydrogenase, Brassica oleracea, Z97060 [gi:2760543], and gi:3986289 from Ipomea batatas" 7 3 15 8 At3g47990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 15 9 At3g48160 "transcription factor, putative / E2F-like repressor E2L3 (E2L3) identical to E2F-like repressor E2L3 [Arabidopsis thaliana] GI:20502508" 7 3 15 10 At3g48190 ataxia-telangiectasia mutated protein (Atm) identical to ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] GI:7529272; contains Pfam profile PF00855: PWWP domain; contains GA donor splice site at exon 73 7 3 15 11 At3g51090 expressed protein 7 3 15 12 At3g51130 expressed protein contains Pfam PF03676: Uncharacterised protein family (UPF0183) 7 3 15 13 At3g51320 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 3 15 14 At3g51370 "protein phosphatase 2C, putative / PP2C, putative similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain" 7 3 15 15 At3g51540 "expressed protein mucin 5AC, Homo sapiens, PIR:S53363" 7 3 15 16 At3g51600 nonspecific lipid transfer protein 5 (LTP5) identical to SP|Q9XFS7 Nonspecific lipid-transfer protein 5 (LTP 5) {Arabidopsis thaliana} 7 3 15 17 At3g51750 expressed protein 7 3 15 18 At3g51800 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 7 3 15 19 At3g54290 expressed protein contains Pfam PF03794: Domain of Unknown function 7 3 15 20 At3g54340 floral homeotic protein APETALA3 (AP3) 7 3 15 21 At3g54500 expressed protein 7 3 15 22 At3g54550 hypothetical protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 7 3 15 23 At3g54730 hypothetical protein 7 3 15 24 At3g54790 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 7 3 15 25 At3g54930 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 7 3 16 1 At3g54960 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 7 3 16 2 At3g57785 expressed protein 7 3 16 3 At3g57810 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 7 3 16 4 At3g58000 VQ motif-containing protein contains PF05678: VQ motif 7 3 16 5 At3g58060 "cation efflux family protein / metal tolerance protein, putative (MTPc3) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 7 3 16 6 At3g58250 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 7 3 16 7 At3g58310 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; belongs to a family which includes receptor-like kinase family proteins 7 3 16 8 At3g58470 expressed protein several hypothetical proteins - Saccharomyces cerevisiae 7 3 16 9 At3g58530 F-box family protein-related contains weak similarity to F-box protein FBL2 (GI:6010699) [Rattus norvegicus] 7 3 16 10 At3g61250 myb family transcription factor (MYB17) contains PFAM profile: Myb-like DNA-binding domain PF00249 7 3 16 11 At3g61310 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 7 3 16 12 At3g61470 "chlorophyll A-B binding protein (LHCA2) identical to Lhca2 protein [Arabidopsis thaliana] GI:4741940; similar to chlorophyll A-B binding protein, chloroplast [Precursor] SP:P13869 from [Petunia hybrida]; contains Pfam profile: PF00504 chlorophyll A-B binding protein" 7 3 16 13 At3g61530 ketopantoate hydroxymethyltransferase family protein similar to SP|Q9Y7B6 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) {Emericella nidulans}; contains Pfam profile PF02548: Ketopantoate hydroxymethyltransferase 7 3 16 14 At3g61690 expressed protein 7 3 16 15 At3g61730 hypothetical protein 7 3 16 16 At3g61880 "cytochrome P450, putative similar to cytochrome p450 SP:O48927 from [Arabidopsis thaliana]" 7 3 16 17 At3g61940 "zinc transporter, putative similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; similar to zinc transporter ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 7 3 16 18 At4g00890 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 7 3 16 19 At4g00930 "COP1-interacting protein 4.1 (CIP4.1) identical to cDNA CIP4.1 mRNA for COP1-interacting protein 4.1, GI:13160649" 7 3 16 20 At4g01070 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 7 3 16 21 At4g01130 "acetylesterase, putative similar to lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 7 3 16 22 At4g01270 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 16 23 At4g01340 CHP-rich zinc finger protein-related similar to A. thaliana CHP-rich zinc finger proteins 7 3 16 24 At4g01500 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 7 3 16 25 At4g01540 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365 : No apical meristem (NAM) protein 7 3 17 1 At4g04394 hypothetical protein 7 3 17 2 At4g04423 hypothetical protein 7 3 17 3 At4g04635 hypothetical protein 7 3 17 4 At4g04695 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Lycopersicon esculentum] gi|19171502|emb|CAC87494; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 7 3 17 5 At4g04860 Der1-like family protein / degradation in the ER-like family protein contains Pfam profile: PF04511 Der1-like family 7 3 17 6 At4g04910 "AAA-type ATPase family protein similar to SP|P18708 Vesicular-fusion protein NSF (N-ethylmaleimide-sensitive fusion protein) (NEM-sensitive fusion protein) {Cricetulus griseus}; contains Pfam profiles PF00004: ATPase AAA family, PF02359: Cell division protein 48 (CDC48) N-terminal domain; contains non-consensus AT-AC splice sites at intron 2" 7 3 17 7 At4g05040 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 7 3 17 8 At4g05095 hypothetical protein 7 3 17 9 At4g09810 "transporter-related low similarity to UDP-sugar transporter [Drosophila melanogaster] GI:14971008, UDP-glucuronic acid transporter [Homo sapiens] GI:11463949" 7 3 17 10 At4g09870 "F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; hypothetical protein T25N22.10 -Arabidopsis thaliana, PID:g3805763" 7 3 17 11 At4g10010 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 7 3 17 12 At4g10070 "KH domain-containing protein DNA-directed RNA polymerase (EC 2.7.7.6) II largestchain - mouse, PIR2:A28490" 7 3 17 13 At4g10210 "hypothetical protein IB1C3-1 protein, Arabidopsis thaliana, AJ011845 contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 7 3 17 14 At4g10265 "wound-responsive protein, putative similar to wound induced protein [Lycopersicon esculentum] GI:19320" 7 3 17 15 At4g10430 expressed protein 7 3 17 16 At4g10490 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to naringenin,2-oxoglutarate 3-dioxygenase [Dianthus caryophyllus][SP|Q05964], hyoscyamine 6 beta-hydroxylase [Atropa belladonna][gi:4996123]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 7 3 17 17 At4g13270 expressed protein 7 3 17 18 At4g13320 expressed protein 7 3 17 19 At4g13470 hypothetical protein 7 3 17 20 At4g13530 "expressed protein predicted protein, Arabidopsis thaliana" 7 3 17 21 At4g13680 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 7 3 17 22 At4g13730 RabGAP/TBC domain-containing protein low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 7 3 17 23 At4g13860 "glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein 2, mitochondrial precursor (AtGRP2) (Swiss-Prot:Q9SVM8) [Arabidopsis thaliana] ; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 7 3 17 24 At4g13890 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 7 3 17 25 At4g16265 "DNA-directed RNA polymerase II, putative similar to SP|P36958 DNA-directed RNA polymerase II 15.1 kDa polypeptide (EC 2.7.7.6) {Drosophila melanogaster}; contains Pfam profile PF02150: RNA polymerases M/15 Kd subunit" 7 3 18 1 At4g16320 expressed protein ; expression supported by MPSS 7 3 18 2 At4g16470 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 3 18 3 At4g16520 "autophagy 8f (APG8f) identical to autophagy 8f [Arabidopsis thaliana] GI:19912161; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 7 3 18 4 At4g16660 "heat shock protein 70, putative / HSP70, putative " 7 3 18 5 At4g16695 expressed protein 7 3 18 6 At4g16810 "expressed protein similar to vernalization 2 protein [Arabidopsis thaliana] GI:16945788, embryonic flower 2 [Arabidopsis thaliana] GI:14276050, fertilization-independent seed 2 protein [Arabidopsis thaliana] GI:4185499" 7 3 18 7 At4g16845 vernalization 2 protein (VRN2) identical to vernalization 2 protein [Arabidopsis thaliana] gi|16945788|gb|AAL32135 7 3 18 8 At4g19420 pectinacetylesterase family protein contains Pfam profile: PF03283 pectinacetylesterase 7 3 18 9 At4g19480 hypothetical protein 7 3 18 10 At4g19640 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB5A GI:1370178 from [Lotus japonicus]" 7 3 18 11 At4g19690 "iron-responsive transporter (IRT1) identical to Fe(II) transport protein [Arabidopsis thaliana] gi|1353266|gb|AAB01678; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 7 3 18 12 At4g19860 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to lysosomal phospholipase A2 [Mus musculus] GI:18699602; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 7 3 18 13 At4g19910 Toll-Interleukin-Resistance (TIR) domain-containing protein contains Pfam profile PF01582: TIR domain 7 3 18 14 At4g20050 expressed protein C65DMY30S 7 3 18 15 At4g20100 PQ-loop repeat family protein / transmembrane family protein similar to SP|Q10482 Seven transmembrane protein 1 {Schizosaccharomyces pombe}; contains Pfam profile PF04193: PQ loop repeat 7 3 18 16 At4g22890 expressed protein 7 3 18 17 At4g22950 "MADS-box protein (AGL19) MADS-box protein AGL14, Arabidopsis thaliana, gb:U20184" 7 3 18 18 At4g23130 receptor-like protein kinase 6 (RLK6) identical to receptor-like protein kinase 6 [Arabidopsis thaliana] GI:13506749; contains Pfam domain PF00069: Protein kinase domain 7 3 18 19 At4g23180 "receptor-like protein kinase 4, putative (RLK4) nearly identical to receptor-like protein kinase 4 [Arabidopsis thaliana] GI:13506745; contains Pfam domain, PF00069: Protein kinase domain; identical to cDNA receptor-like protein kinase 4 (RLK4) GI:13506744" 7 3 18 20 At4g23330 eukaryotic translation initiation factor-related contains weak similarity to Swiss-Prot:Q9LD55 eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) [Arabidopsis thaliana] 7 3 18 21 At4g23380 "hypothetical protein predicted proteins, Arabidopsis thaliana" 7 3 18 22 At4g23520 "cysteine proteinase, putative contains similarity to cysteine proteinase (thiol protease) RD21A GI:435619, SP:P43297 from [Arabidopsis thaliana]" 7 3 18 23 At4g23580 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 3 18 24 At4g26140 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor GI:3869280 from [Carica papaya]" 7 3 18 25 At4g26200 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthase from Malus x domestica, GI:1658062 [U73816], Pyrus pyrifolia GI:4586411" 7 3 19 1 At4g26370 antitermination NusB domain-containing protein contains Pfam profile: PF01029 NusB family 7 3 19 2 At4g26400 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 7 3 19 3 At4g26550 "expressed protein probable membrane protein YBL102w, yeast, PIR2:S45393" 7 3 19 4 At4g26580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 19 5 At4g26730 hypothetical protein 7 3 19 6 At4g26790 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 7 3 19 7 At4g29370 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 3 19 8 At4g29430 "40S ribosomal protein S15A (RPS15aE) ribosomal protein S15a - Brassica napus,PIR2:S20945" 7 3 19 9 At4g29610 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 6 (CDA6) [Arabidopsis thaliana] GI:3818575, cytidine deaminase homolog DesD [Arabidopsis thaliana] GI:4836446; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 7 3 19 10 At4g29670 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin 7 3 19 11 At4g29810 "mitogen-activated protein kinase kinase (MAPKK) (MKK2) identical to MAP kinase kinase 2 [Arabidopsis thaliana] gi|3219267|dbj|BAA28828; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 7 3 19 12 At4g29850 expressed protein contains Pfam PF05915: Eukaryotic protein of unknown function (DUF872) 7 3 19 13 At4g30020 subtilase family protein contains similarity to meiotic serine proteinase TMP GI:6468325 from [Lycopersicon esculentum] 7 3 19 14 At4g30080 transcriptional factor B3 family protein contains Pfam profile: PF02362 B3 DNA binding domain 7 3 19 15 At4g32560 paramyosin-related contains weak similarity to Paramyosin (Swiss-Prot:P10567) [Caenorhabditis elegans] 7 3 19 16 At4g32600 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING finger protein 38 [Homo sapiens] GI:21666412; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 7 3 19 17 At4g32785 expressed protein 7 3 19 18 At4g32840 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 7 3 19 19 At4g32950 "protein phosphatase 2C, putative / PP2C, putative phosphoprotein phosphatase, Arabidopsis thaliana, PIR2:S55457" 7 3 19 20 At4g33000 calcineurin B-like protein 10 (CBL10) identical to calcineurin B-like protein 10 [Arabidopsis thaliana] GI:29150248 7 3 19 21 At4g33160 F-box family protein (FBX13) contains similarity to fimbriata GI:547307 from [Antirrhinum majus] 7 3 19 22 At4g33230 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 7 3 19 23 AT5G57480 PC-1 C06 7 3 19 24 3XSSC PC-1 C18 7 3 19 25 AT1G29930 PC-1 G06 7 3 20 1 3XSSC PC-1 G18 7 3 20 2 AT3G44150 PC-1 K06 7 3 20 3 3XSSC PC-1 K18 7 3 20 4 AT4G00810 PC-1 O06 7 3 20 5 3XSSC PC-1 O18 7 3 20 6 At4g35790 phospholipase D delta / PLD delta (PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0 from [Arabidopsis thaliana]; supporting cDNA gi|11761141|dbj|AB031047.1| 7 3 20 7 At4g35850 pentatricopeptide (PPR) repeat-containing protein low similarity to CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat 7 3 20 8 At4g36000 pathogenesis-related thaumatin family protein similar to thaumatin-like protein precursor [Pyrus pyrifolia] GI:3241854; contains Pfam profile PF00314: Thaumatin family 7 3 20 9 At4g36050 endonuclease/exonuclease/phosphatase family protein 7 3 20 10 At4g36190 serine carboxypeptidase S28 family protein contains Pfam PF05577: Serine carboxypeptidase S28 7 3 20 11 At4g36240 "zinc finger (GATA type) family protein NTL1 protein, curled-leaved tobacco, PIR2:S46419" 7 3 20 12 At4g36430 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|6822093|emb|CAB71009; identical to cDNA class III peroxidase ATP31, GI:17530561" 7 3 20 13 At4g36490 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; supporting cDNA gi|23463078|gb|BT000834.1|" 7 3 20 14 At4g39140 expressed protein 7 3 20 15 At4g39200 "40S ribosomal protein S25 (RPS25E) ribosomal protein S25, Lycopersicon esculentum, PIR2:S40089" 7 3 20 16 At4g39300 expressed protein 7 3 20 17 At4g39360 hypothetical protein 7 3 20 18 At4g39510 cytochrome P450 family protein contains Pfam PF00067: Cytochrome P450; similar to Cytochrome P450 86A2 (SP:O23066) [Arabidopsis thaliana] 7 3 20 19 At4g39560 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; contains Prosite PS00018: EF-hand calcium-binding domain 7 3 20 20 At4g39710 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative similar to FK506 binding protein 1 (GP:21535744) [Arabidopsis thaliana]" 7 3 20 21 At4g39753 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 3 20 22 At5g03280 "ethylene-insensitive 2 (EIN2) identical to EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563; metal transport capacity has not been shown, PMID:11500563, PMID:1038174" 7 3 20 23 At5g03340 "cell division cycle protein 48, putative / CDC48, putative very strong similarity to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF02359: Cell division protein 48 (CDC48) N-terminal domain; supporting cDNA gi|26449351|dbj|AK117125.1|" 7 3 20 24 At5g03470 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B' (B'alpha) similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 7 3 20 25 At5g03530 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 7 3 21 1 At5g03690 "fructose-bisphosphate aldolase, putative similar to PIR|S65073 fructose-bisphosphate aldolase (EC 4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa]; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 7 3 21 2 At5g03750 hypothetical protein 7 3 21 3 At5g03920 expressed protein 7 3 21 4 At5g03980 GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile:PF00657 Lipase/Acylhydrolase with GDSL-like motif 7 3 21 5 At5g06560 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 7 3 21 6 At5g06620 expressed protein 7 3 21 7 At5g06790 expressed protein similar to unknown protein (emb|CAB67623.1); expression supported by MPSS 7 3 21 8 At5g06839 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 7 3 21 9 At5g07000 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 7 3 21 10 At5g07060 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 7 3 21 11 At5g07220 BAG domain-containing protein contains Pfam:PF02179 BAG domain 7 3 21 12 At5g07270 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 7 3 21 13 At5g10360 40S ribosomal protein S6 (RPS6B) 7 3 21 14 At5g10420 "ripening-responsive protein, putative similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family" 7 3 21 15 At5g10580 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 7 3 21 16 At5g10630 "elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix]" 7 3 21 17 At5g10780 "expressed protein HSPC184, Homo sapiens, EMBL:AF151018" 7 3 21 18 At5g10840 "endomembrane protein 70, putative TM4 family;" 7 3 21 19 At5g11010 pre-mRNA cleavage complex-related low similarity to SP|Q92989 Pre-mRNA cleavage complex II protein Clp1 {Homo sapiens} 7 3 21 20 At5g11060 homeobox protein knotted-1 like 4 (KNAT4) identical to homeobox protein knotted-1 like 4 ( KNAT4) SP:P48001 from [Arabidopsis thaliana] 7 3 21 21 At5g14200 "3-isopropylmalate dehydrogenase, chloroplast, putative strong similarity to SP|P29102 3-isopropylmalate dehydrogenase, chloroplast precursor {Brassica napus}" 7 3 21 22 At5g14260 "SET domain-containing protein low similarity to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 7 3 21 23 At5g14430 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 7 3 21 24 At5g14490 no apical meristem (NAM) family protein similar to CUC2 (GI:1944132) [Arabidopsis thaliana]; 7 3 21 25 At5g14640 protein kinase family protein similar to glycogen synthase kinase-3 homolog MsK-3 SP:P51139 from [Medicago sativa]; contains Pfam profile PF00069: Protein kinase domain 7 3 22 1 At5g14700 "cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Saccharum officinarum [GI:3341511]" 7 3 22 2 At5g14880 "potassium transporter, putative similar to potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 7 3 22 3 At5g14930 leaf senescence-associated protein (SAG101) nearly identical to leaf senescence-associated gene SAG101 (putative acyl hydrolase) [Arabidopsis thaliana] GI:8699168; contains Pfam profile PF01764: Lipase 7 3 22 4 At5g17610 expressed protein 7 3 22 5 At5g17670 expressed protein 7 3 22 6 At5g17810 homeobox-leucine zipper transcription factor family protein similar to to PRESSED FLOWER (GP:17907768) {Arabidopsis thaliana}; 7 3 22 7 At5g17870 plastid-specific ribosomal protein-related contains similarity to plastid-specific ribosomal protein 6 precursor GI:7578927 from [Spinacia oleracea] 7 3 22 8 At5g18060 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) GI:3043536 from radish [Raphanus sativus]" 7 3 22 9 At5g18110 novel cap-binding protein (nCBP) identical to novel cap-binding protein nCBP [Arabidopsis thaliana] GI:3108209; contains Pfam profile PF01652: Eukaryotic initiation factor 4E 7 3 22 10 At5g18260 expressed protein 7 3 22 11 At5g18300 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; NAC-domain protein TERN, Nicotiana tabacum, EMBL:AB021178" 7 3 22 12 At5g20900 expressed protein 7 3 22 13 At5g20940 "glycosyl hydrolase family 3 protein beta-glucosidase, common nasturtium, PIR:T10521" 7 3 22 14 At5g21105 "L-ascorbate oxidase, putative similar to L-ascorbate oxidase from {Nicotiana tabacum} SP|Q40588, {Cucurbita pepo var. melopepo} SP|P37064; contains Pfam profile PF00394: Multicopper oxidase; supported by cDNA gi_15215753_gb_AY050406.1_; A false intron was added between exons 4 and 5 to circumvent the single nucleotide insertion in this BAC which, otherwise, causes a frameshift." 7 3 22 15 At5g21150 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}; contains Pfam profile: PF02170 PAZ (Piwi Argonaut and Zwille), PF02171 Piwi domain" 7 3 22 16 At5g22000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 3 22 17 At5g22040 expressed protein 7 3 22 18 At5g22180 hypothetical protein 7 3 22 19 At5g22240 ovate family protein 60% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 7 3 22 20 At5g24870 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 7 3 22 21 At5g24930 zinc finger (B-box type) family protein similar to CONSTANS-like protein 1 GI:4091804 from [Malus x domestica] 7 3 22 22 At5g25110 CBL-interacting protein kinase 25 (CIPK25) identical to CBL-interacting protein kinase 25 [Arabidopsis thaliana] gi|17646697|gb|AAL41008 7 3 22 23 At5g25170 expressed protein 7 3 22 24 At5g25330 "hypothetical protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 7 3 22 25 At5g25390 "AP2 domain-containing transcription factor, putative AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] EMBL:AF003097" 7 3 23 1 At5g25490 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 7 3 23 2 At5g25530 "DNAJ heat shock protein, putative simlar to SP|P25685 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Homo sapiens}; contains Pfam profile PF00226: DnaJ domain" 7 3 23 3 At5g28540 luminal binding protein 1 (BiP-1) (BP1) SWISS-PROT:Q9LKR3 PMID:8888624 7 3 23 4 At5g28610 expressed protein 7 3 23 5 At5g28770 bZIP transcription factor family protein similar to seed storage protein opaque-2(bZIP family)GI:168428 from Zea mays; contains Pfam profile PF00170: bZIP transcription factor; identical to cDNA bZIP protein BZO2H3 GI:10954098 7 3 23 6 At5g28820 hypothetical protein 7 3 23 7 At5g29000 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 7 3 23 8 At5g29090 hypothetical protein 7 3 23 9 At5g31685 expressed protein ; expression supported by MPSS 7 3 23 10 At5g32312 hypothetical protein 7 3 23 11 At5g37550 expressed protein 7 3 23 12 At5g37610 hypothetical protein 7 3 23 13 At5g37800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 3 23 14 At5g37860 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 7 3 23 15 At5g38037 hypothetical protein 7 3 23 16 At5g38090 hypothetical protein 7 3 23 17 At5g38260 "serine/threonine protein kinase, putative similar to receptor serine/threonine kinase PR55K gi|1235680|gb|AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 7 3 23 18 At5g38320 expressed protein ; expression supported by MPSS 7 3 23 19 At5g41150 repair endonuclease (RAD1) (UVH1) contains Pfam PF02732 : ERCC4 domain; contains TIGRFAM TIGR00596: DNA repair protein (rad1); almost identical to 5' repair endonuclease (GI:8926611) [Arabidopsis thaliana] 7 3 23 20 At5g41210 glutathione S-transferase (GST10) identical to glutathione transferase AtGST 10 [Arabidopsis thaliana] GI:4049401 7 3 23 21 At5g41390 hypothetical protein contains 1 predicted transmembrane domain; 7 3 23 22 At5g41460 fringe-related protein strong similarity to unknown protein (pir||T13026) similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 7 3 23 23 At5g41630 F-box family protein contains F-box domain Pfam:PF00646 7 3 23 24 At5g41680 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to receptor-like protein kinase (GI:4008006) [Arabidopsis thaliana]; similar to receptor-like kinase RHG1 (GI:21239380) (GI:21239382) [Glycine max]" 7 3 23 25 At5g41820 geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related low similarity to SP|Q08602 [Rattus norvegicus] 7 3 24 1 At5g41880 DNA primase small subunit family contains Pfam profile: PF01896 DNA primase small subunit 7 3 24 2 At5g44530 subtilase family protein contains Pfam profiles: PF00082 subtilase family 7 3 24 3 At5g44575 expressed protein 7 3 24 4 At5g44720 "molybdenum cofactor sulfurase family protein weak similarity to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains Pfam profiles PF03476: MOSC N-terminal beta barrel domain, PF03473: MOSC domain" 7 3 24 5 At5g44750 "UMUC-like DNA repair family protein / BRCT domain-containing protein low similarity to Rev1S [Homo sapiens] GI:12483635; contains Pfam profiles PF00817: ImpB/MucB/SamB family, PF00533: BRCA1 C Terminus (BRCT) domain" 7 3 24 6 At5g44920 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 7 3 24 7 At5g44970 hypothetical protein contains a novel domain with similarity to F-box domain; 7 3 24 8 At5g45113 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 7 3 24 9 At5g45170 "CbbY protein-related low similarity to SP|P40119 CbbY protein, chromosomal {Alcaligenes eutrophus}" 7 3 24 10 At5g47720 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 7 3 24 11 At5g47770 "farnesyl pyrophosphate synthetase 1, mitochondrial (FPS1) / FPP synthetase 1 / farnesyl diphosphate synthase 1 identical to SP|Q09152 Farnesyl pyrophosphate synthetase 1, mitochondrial precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis thaliana}" 7 3 24 12 At5g47920 expressed protein similar to unknown protein (emb|CAB67623.1) 7 3 24 13 At5g47980 "transferase family protein similar to alcohol acyltransferase [Fragaria x ananassa][GI:10121328][PMID:10810141], deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034]" 7 3 24 14 At5g48160 "tropomyosin-related contains weak similarity to Tropomyosin, muscle (Allergen Ani s 3). (Swiss-Prot:Q9NAS5) [Anisakis simplex]" 7 3 24 15 At5g48210 expressed protein 7 3 24 16 At5g48375 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to thioglucosidase (GI:871992) [Arabidopsis thaliana] 7 3 24 17 At5g48410 "glutamate receptor family protein (GLR1.3) plant glutamate receptor family, PMID:11379626" 7 3 24 18 At5g51110 expressed protein 7 3 24 19 At5g51170 expressed protein 7 3 24 20 At5g51300 splicing factor-related contains similarity to SF1 protein [Drosophila melanogaster] GI:6687400 7 3 24 21 At5g51360 hypothetical protein 7 3 24 22 At5g51530 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 7 3 24 23 At5g51590 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 7 3 24 24 At5g51730 expressed protein 7 3 24 25 At5g51790 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 3 25 1 At5g54540 expressed protein 7 3 25 2 At5g54590 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 7 3 25 3 At5g54730 expressed protein 7 3 25 4 At5g54780 RabGAP/TBC domain-containing protein contains similarity to SP|P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains Pfam profile PF00566: TBC domain 7 3 25 5 At5g54930 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 7 3 25 6 At5g54970 expressed protein 7 3 25 7 At5g55110 "stigma-specific Stig1 family protein similar to stigma-specific protein STIG1 [Nicotiana tabacum] GI:496647; contains Pfam profile PF04885: Stigma-specific protein, Stig1" 7 3 25 8 At5g55150 F-box family protein similar to unknown protein (dbj|BAA95762.1) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 7 3 25 9 At5g57850 aminotransferase class IV family protein contains Pfam profile: PF01063 aminotransferase class IV 7 3 25 10 At5g57880 expressed protein ; expression supported by MPSS 7 3 25 11 At5g58040 fip1 motif-containing protein contains Pfam profile PF05182: Fip1 motif 7 3 25 12 At5g58100 expressed protein 7 3 25 13 At5g58240 "bis(5'-adenosyl)-triphosphatase, putative similar to bis(5'-adenosyl)-triphosphatase (Diadenosine 5',5'''- P1,P3-triphosphate hydrolase, Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE, Fragile histidine triad protein) [Homo sapiens] Swiss-Prot:P49789" 7 3 25 14 At5g58300 "leucine-rich repeat transmembrane protein kinase, putative " 7 3 25 15 At5g58430 "exocyst subunit EXO70 family protein leucine zipper-containing protein, Lycopersicon esculentum, PIR:S21495; contains Pfam domain PF03081: Exo70 exocyst complex subunit; similar to rexo70 (GI:2827160) {Rattus norvegicus}" 7 3 25 16 At5g58490 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 7 3 25 17 At5g61080 "expressed protein predicted proteins, Arabidopsis thaliana; expression supported by MPSS" 7 3 25 18 At5g61140 "DEAD box RNA helicase, putative similar to ASC-1 complex subunit P200 [Homo sapiens] GI:12061185; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF02889: Sec63 domain" 7 3 25 19 At5g61300 expressed protein 7 3 25 20 At5g61340 expressed protein 7 3 25 21 At5g61500 "autophagy 3 (APG3) identical to autophagy 3 [Arabidopsis thaliana] GI:19912141; contains Pfam profiles PF03986: Autophagocytosis associated protein N-terminal domain, PF03987: Autophagocytosis associated protein C-terminal domain" 7 3 25 22 At5g61540 "L-asparaginase, putative / L-asparagine amidohydrolase, putative similar to Swiss-Prot:O02467 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (Glycosylasparaginase) (Aspartylglucosaminidase)(N4-(N-acetyl-beta- glucosaminyl)-L-asparagine amidase) (AGA)[Spodoptera frugiperda]" 7 3 25 23 At5g61680 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 7 3 25 24 At5g61740 "ABC transporter family protein ABC family transporter, Entamoeba histolytica, TREMBL:EH058" 7 3 25 25 At5g64430 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 7 3 26 1 At5g64470 expressed protein similar to unknown protein (gb|AAD15463.1) 7 3 26 2 At5g64620 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 3 26 3 At5g64660 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 7 3 26 4 At5g64810 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 7 3 26 5 At5g64830 "programmed cell death 2 C-terminal domain-containing protein low similarity to SP|P46718 Programmed cell death protein 2 (Zinc finger protein Rp-8) {Mus musculus}; contains Pfam profile PF04194: Programmed cell death protein 2, C-terminal domain" 7 3 26 6 At5g65000 nucleotide-sugar transporter family protein low similarity to SP|Q9Y2D2 UDP N-acetylglucosamine transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 7 3 26 7 At5g65020 annexin 2 (ANN2) identical to annexin (AnnAt2) [Arabidopsis thaliana] GI:4959108 7 3 26 8 At5g67560 "ADP-ribosylation factor, putative identical to GP:15450888 ADP-ribosylation factor-like protein {Arabidopsis thaliana]" 7 3 26 9 At5g67620 expressed protein 7 3 26 10 At3g28300 integrin-related protein 14a identical to integrin-related At14a protein GI:11994573 [Arabidopsis thaliana] 7 3 26 11 At5g50640 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 7 3 26 12 ath-MIR163 miRNA gene Arabidopsis thaliana miR163 stem-loop 7 3 26 13 ath-MIR169k miRNA gene Arabidopsis thaliana miR169k stem-loop 7 3 26 14 ath-MIR395f miRNA gene Arabidopsis thaliana miR395f stem-loop 7 3 26 15 ath-MIR399f miRNA gene Arabidopsis thaliana miR399f stem-loop 7 3 26 16 At3g43870 hypothetical protein 7 3 26 17 At3g43930 "expressed protein predicted proteins, Arabidopsis thaliana; expression supported by MPSS" 7 3 26 18 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 7 3 26 19 At3g44160 chloroplast outer membrane protein-related low similarity to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607 7 3 26 20 At3g44340 "sec23/sec24 transport family protein contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger" 7 3 26 21 At3g44430 expressed protein 7 3 26 22 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 7 3 26 23 At3g44660 histone deacetylase-related / HD-related similar to SP|O09106 Histone deacetylase 1 (HD1) {Mus musculus} 7 3 26 24 Blank Blank 7 3 26 25 Blank Blank 7 4 1 1 atc02 Randomly generated negative control 7 4 1 2 atc08 Randomly generated negative control 7 4 1 3 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 7 4 1 4 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 7 4 1 5 Alien4 Control: Stratagene Spotreport Alien Oligo 7 4 1 6 Alien10 Control: Stratagene Spotreport Alien Oligo 7 4 1 7 atc06 Randomly generated negative control 7 4 1 8 atc12 Randomly generated negative control 7 4 1 9 At1g02820 late embryogenesis abundant 3 family protein / LEA3 family protein similar to late embryogenis abundant protein 5 GI:2981167 from [Nicotiana tabacum]; contains Pfam profile PF03242: Late embryogenesis abundant protein 7 4 1 10 At1g02850 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 7 4 1 11 At1g02960 expressed protein 7 4 1 12 At1g02990 expressed protein similar to mature-parasite-infected erythrocyte surface antigen (GI:160409) {Plasmodium falciparum} 7 4 1 13 At1g03110 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to WD-repeat domain 4 protein (GI:9955698) [Mus musculus] 7 4 1 14 At1g03170 expressed protein 7 4 1 15 At1g03350 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 7 4 1 16 At1g03410 "2-oxoglutarate-dependent dioxygenase, putative identical to 2A6 (GI:599622), a homolog of the tomato ethylene synthesis regulatory protein E8; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 7 4 1 17 At1g06070 "bZIP transcription factor, putative (bZIP69) similar to transcriptional activator RF2a GB:AF005492 GI:2253277 from [Oryza sativa]; contains Pfam profile PF00170: bZIP transcription factor" 7 4 1 18 At1g06130 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme GB:AAC49865 GI:2570338 from [Arabidopsis thaliana]" 7 4 1 19 At1g06250 lipase class 3 family protein similar to lipase GB:AAD01804 GI:4103627 from [Dianthus caryophyllus]; contains Pfam profile PF01764: Lipase 7 4 1 20 At1g06320 hypothetical protein 7 4 1 21 At1g06490 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 7 4 1 22 At1g06550 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 7 4 1 23 At1g06720 "expressed protein contains Pfam domain, PF04950: Protein of unknown function (DUF663)" 7 4 1 24 At1g06770 zinc finger (C3HC4-type RING finger) family protein 7 4 1 25 At1g09270 "importin alpha-1 subunit, putative (IMPA4) similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 7 4 2 1 At1g09320 agenet domain-containing protein contains Pfam PF05641: Agenet domain 7 4 2 2 At1g09483 hypothetical protein 7 4 2 3 At1g09520 expressed protein 7 4 2 4 At1g09660 "KH domain-containing quaking protein, putative similar to GB:AAC67357" 7 4 2 5 At1g09720 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 7 4 2 6 At1g09860 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 7 4 2 7 At1g09920 TRAF-type zinc finger-related contains Pfam PF02176: TRAF-type zinc finger; similar to TNF receptor associated factor 4 (GI:7274404) [Mus musculus] (GI:7274404); similar to Cysteine rich motif Associated to Ring and Traf domains protein (mCART1)(GI:1041446) [Mus musculus] 7 4 2 8 At1g12490 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 7 4 2 9 At1g12560 "expansin, putative (EXP7) similar to expansin GI:2828241 from [Brassica napus]; alpha-expansin gene family, PMID:11641069" 7 4 2 10 At1g12750 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 7 4 2 11 At1g12805 expressed protein 7 4 2 12 At1g12970 leucine-rich repeat family protein 7 4 2 13 At1g13040 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 2 14 At1g13200 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain 7 4 2 15 At1g13250 glycosyl transferase family 8 protein contains Pfam profile: PF01501 Glycosyl transferase family 8 7 4 2 16 At1g15910 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 7 4 2 17 At1g15940 expressed protein similar To androgen-induced prostate proliferative shutoff associated protein (GI:4559410) [Homo sapiens] 7 4 2 18 At1g16110 "wall-associated kinase, putative contains similarity to wall-associated kinase 2 GI:4826399 from [Arabidopsis thaliana]" 7 4 2 19 At1g16170 expressed protein 7 4 2 20 At1g16350 "inosine-5'-monophosphate dehydrogenase, putative strong similarity to SP|P47996 gb|L34684 inosine monophosphate dehydrogenase (IMPDH) from Arabidopsis thaliana; member of the PF|00478 IMP dehydrogenase family" 7 4 2 21 At1g16410 "cytochrome P450, putative similar to gb|AF069494 cytochrome P450 from Sinapis alba and is a member of the PF|00067 Cytochrome P450 family" 7 4 2 22 At1g16560 Per1-like family protein contains Pfam profile PF04080: Per1-like 7 4 2 23 At1g16610 "arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana]" 7 4 2 24 At1g19400 expressed protein 7 4 2 25 At1g19470 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 4 3 1 At1g19650 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to SP:P24859 from [Kluyveromyces lactissimilar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 7 4 3 2 At1g19710 glycosyl transferase family 1 protein contains Pfam profile: PF00534 glycosyl transferases group 1 7 4 3 3 At1g19900 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 7 4 3 4 At1g19960 expressed protein 7 4 3 5 At1g20150 subtilase family protein similar to subtilisin-type protease precursor GI:14150446 from [Glycine max] 7 4 3 6 At1g20225 expressed protein 7 4 3 7 At1g22940 "thiamin biosynthesis protein, putative strong similarity to hydroxymethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase (BTH1) GI:7488455 from [Brassica napus]" 7 4 3 8 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; strong similarity to farnesylated protein ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 7 4 3 9 At1g23130 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)]; location of ESTs gb|T45139 and gb|T43456 ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 7 4 3 10 At1g23190 "phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative strong similarity to SP|P93805 Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2) {Zea mays}; contains InterPro accession IPR006352: Phosphoglucosamine mutase" 7 4 3 11 At1g23340 "expressed protein similar to At1g70550, At1g10750 contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 7 4 3 12 At1g23380 "homeobox transcription factor (KNAT6) nearly identical to homeodomain transcription factor KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana], homeodomain transcription factor KNAT6 (KNAT6S) [Arabidopsis thaliana] GI:15991300" 7 4 3 13 At1g23510 expressed protein 7 4 3 14 At1g23570 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 7 4 3 15 At1g27290 expressed protein 7 4 3 16 At1g27350 expressed protein contains 1 transmembrane domain; similar to ribosome associated membrane protein RAMP4 GI:4585827 [Rattus norvegicus]; similar to ESTs gb|T20610 and gb|AA586199 7 4 3 17 At1g27450 adenine phosphoribosyltransferase 1 (APT1) nearly identical to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana} 7 4 3 18 At1g27510 expressed protein 7 4 3 19 At1g27670 expressed protein 7 4 3 20 At1g27720 transcription initiation factor IID (TFIID) component TAF4 family protein contains Pfam profile PF05236: Transcription initiation factor TFIID component TAF4 family 7 4 3 21 At1g27890 "CCR4-NOT transcription complex protein, putative contains similarity to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Human]" 7 4 3 22 At1g27950 lipid transfer protein-related low similarity to lipid transfer protein Picea abies GI:2627141; contains Pfam profile: PF00234: Protease inhibitor/seed storage/LTP family 7 4 3 23 At1g30850 hypothetical protein 7 4 3 24 At1g30910 "molybdenum cofactor sulfurase family protein weak similarity to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains Pfam profiles PF03476: MOSC N-terminal beta barrel domain, PF03473: MOSC domain" 7 4 3 25 At1g31130 expressed protein 7 4 4 1 At1g31175 expressed protein 7 4 4 2 At1g31350 F-box family protein similar to hypothetical protein GB:AAF24593 GI:6692128 from [Arabidopsis thaliana] ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 7 4 4 3 At1g31410 "putrescine-binding periplasmic protein-related similar to Chain A, Putrescine Receptor (Potf) (GI:3891734) [Escherichia coli]; similar to Chain C, Putrescine Receptor (Potf) (GI:3891736) [Escherichia coli]; similar to Putrescine-binding periplasmic protein precursor. (Swiss-Prot:P31133) [Escherichia coli]" 7 4 4 4 At1g31620 hypothetical protein 7 4 4 5 At1g31680 copper amine oxidase family protein contains similarity to amine oxidase [copper-containing] precursor [Pisum sativum] SWISS-PROT:Q43077 7 4 4 6 At1g34740 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 7 4 4 7 At1g34780 "protein disulfide isomerase-related contains weak similarity to Pfam:P08003 protein disulfide isomerase A4 precursor (Protein ERp-72, ERp72) [Mus musculus]" 7 4 4 8 At1g35230 arabinogalactan-protein (AGP5) identical to gi_3883128_gb_AAC77827 7 4 4 9 At1g35320 expressed protein 7 4 4 10 At1g35515 myb family transcription factor (MYB8) similar to DNA-binding protein GB:AAA98761 GI:1020155 from [Arabidopsis thaliana] 7 4 4 11 At1g35570 hypothetical protein 7 4 4 12 At1g35770 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 7 4 4 13 At1g35880 hypothetical protein 7 4 4 14 At1g47450 expressed protein 7 4 4 15 At1g47495 hypothetical protein 7 4 4 16 At1g47670 amino acid transporter family protein similar to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 7 4 4 17 At1g47740 expressed protein 7 4 4 18 At1g47885 "leucine-rich repeat family protein contains 2 leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 7 4 4 19 At1g47960 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 4 4 20 At1g48120 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 7 4 4 21 At1g48170 expressed protein 7 4 4 22 At1g51230 hypothetical protein similar to hypothetical protein GB:AAD30637 7 4 4 23 At1g51290 "F-box family protein (FBX10) contains Pfam F-box domain PF:00646; similar to F-box protein family, AtFBX9 (GP:20197985) {Arabidopsis thaliana}" 7 4 4 24 At1g51430 expressed protein 7 4 4 25 At1g51490 "glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to Cyanogenic Beta-Glucosidase (GI:1311386) (pdb:1CBG) [Trifolium repens] (J. Mol. Biol. 229 (3), 791-793 (1993))" 7 4 5 1 At1g51630 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 7 4 5 2 At1g51680 4-coumarate--CoA ligase 1 / 4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana} 7 4 5 3 At1g51820 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase GI:1321686 from (Arabidopsis thaliana); contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 7 4 5 4 At1g51880 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 7 4 5 5 At1g54500 rubredoxin family protein similar to SP|P00270 Rubredoxin (Rd) {Desulfovibrio gigas}; contains Pfam profile PF00301: Rubredoxin 7 4 5 6 At1g54560 "myosin, putative similar to myosin GI:433663 from [Arabidopsis thaliana]" 7 4 5 7 At1g54730 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 7 4 5 8 At1g54790 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 7 4 5 9 At1g54950 hypothetical protein 7 4 5 10 At1g55000 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 7 4 5 11 At1g55190 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 7 4 5 12 At1g55250 expressed protein weak similarity to PUMA1 [Parascaris univalens] GI:3068590 7 4 5 13 At1g59720 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 5 14 At1g59750 auxin-responsive factor (ARF1) identical to auxin response factor 1 GI:2245378 from [Arabidopsis thaliana] 7 4 5 15 At1g59885 hypothetical protein 7 4 5 16 At1g59940 two-component responsive regulator / response regulator 3 (ARR3) identical to response regulator 3 GI:3953595 from [Arabidopsis thaliana] 7 4 5 17 At1g60110 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 7 4 5 18 At1g60190 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 7 4 5 19 At1g60430 "ARP2/3 complex 21 kDa subunit family contains Pfam PF04062: P21-ARC (ARP2/3 complex 21 kDa subunit); similar to Arp2/3 complex subunit p21-Arc (GI:6983853) [Mus musculus]; similar to ARP2/3 complex 21 kDa subunit (P21-ARC) (Actin-related protein 2/3 complex subunit 3) (Swiss-Prot:O15145) [Homo sapiens]; similar to Chain E, Crystal Structure Of Arp23 COMPLEX Length(GI:17943203) [" 7 4 5 20 At1g60500 "dynamin family protein similar to RBTMx2 [Oncorhynchus mykiss] GI:1399452; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 7 4 5 21 At1g63320 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 5 22 At1g63380 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 7 4 5 23 At1g63570 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function DUF26; similar to receptor-like protein kinase 4 (GI:13506745) [Arabidopsis thaliana] 7 4 5 24 At1g63610 expressed protein 7 4 5 25 At1g63750 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 7 4 6 1 At1g63810 nucleolar RNA-associated family protein / Nrap family protein contains Pfam profile PF03813: Nrap protein; similar to nucleolar RNA-associated protein alpha (GI:18539461) [Mus musculus] 7 4 6 2 At1g63950 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 7 4 6 3 At1g63990 "DNA topoisomerase VIA, putative (SPO11-2) similar to topoisomerase 6 subunit A (spo11) [Arabidopsis thaliana] GI:12331186; contains Pfam profile PF04406: Type IIB DNA topoisomerase; identical to cDNA putative topoisomerase VIA (SPO11 gene 2) GI:7270976" 7 4 6 4 At1g66790 hypothetical protein 7 4 6 5 At1g66850 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to GP|3062791 Lipid transfer protein {Brassica rapa}; contains Pfam profile: PF00234: protease inhibitor/seed storage/LTP family 7 4 6 6 At1g67025 hypothetical protein 7 4 6 7 At1g67070 "phosphomannose isomerase, putative (DIN9) contains Pfam profile: PF01238 phosphomannose isomerase type I ;similar to phosphomannose isomerase GI:10834550 from [Arabidopsis thaliana]; identical to cDNA phosphomannose isomerase (din9) partial cds GI:10834549" 7 4 6 8 At1g67230 expressed protein 7 4 6 9 At1g67300 "hexose transporter, putative similar to hexose transporters from Solanum tuberosum [GI:8347246], Nicotiana tabacum [GI:8347244], Arabidopsis thaliana [GI:8347250]; contains Pfam profile PF00083: major facilitator superfamily protein" 7 4 6 10 At1g67460 "hypothetical protein contains Pfam domain PF03193: Protein of unknown function, DUF258" 7 4 6 11 At1g67520 lectin protein kinase family protein contains Pfam domains PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding) 7 4 6 12 At1g70160 expressed protein similar to hypothetical protein GI:4455225 from [Arabidopsis thaliana] 7 4 6 13 At1g70200 RNA recognition motif (RRM)-containing protein contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 7 4 6 14 At1g70390 F-box family protein contains Pfam profile: PF00646 F-box domain 7 4 6 15 At1g70430 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 4 6 16 At1g70570 "anthranilate phosphoribosyltransferase, putative similar to anthranilate phosphoribosyltransferase (EC 2.4.2.18) SP:O66576 from [Aquifex aeolicus]" 7 4 6 17 At1g70610 ABC transporter (TAP1) contains Pfam profile: PF00005 ABC transporters; similar to TAP1 protein (transporter of processed antigen) GB:AAD53033 (Oncorhynchus mykiss); identical to cDNA transporter associated with antigen processing-like protein (TAP1) GI:19335721 7 4 6 18 At1g70780 expressed protein 7 4 6 19 At1g70820 "phosphoglucomutase, putative / glucose phosphomutase, putative similar to phosphoglucomutase GI:534981 from [Spinacia oleracea], phosphomannomutase [Pseudomonas aeruginosa] GI:150994; contains InterPro accession IPR006352: Phosphoglucosamine mutase" 7 4 6 20 At1g73650 expressed protein 7 4 6 21 At1g73690 "cell division protein kinase, putative similar to cell division protein kinase 7 [Homo sapiens] SWISS-PROT:P50613" 7 4 6 22 At1g73860 kinesin motor protein-related similar to kinesin-C GB:AAF04841 from [Strongylocentrotus purpuratus] 7 4 6 23 At1g73910 actin-related protein 5 (ARP5) identical to actin-related protein 5 (ARP5) GI:21489922 from [Arabidopsis thaliana] 7 4 6 24 At1g74060 60S ribosomal protein L6 (RPL6B) similar to 60S ribosomal protein L6 (YL 16 like) GB:CAB57309 from [Cyanophora paradoxa] 7 4 6 25 At1g74120 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 7 4 7 1 At1g74300 "esterase/lipase/thioesterase family protein low similarity to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase [Rhodococcus sp. RHA1] GI:8978311; contains Interpro entry IPR000379" 7 4 7 2 At1g74350 "intron maturase, type II family protein similar to maturase [Arabidopsis thaliana] GI:6851020; contains Pfam profile: PF01348 Type II intron maturase" 7 4 7 3 AT5G57480 PC-1 D06 7 4 7 4 3XSSC PC-1 D18 7 4 7 5 AT1G29930 PC-1 H06 7 4 7 6 3XSSC PC-1 H18 7 4 7 7 AT3G44150 PC-1 L06 7 4 7 8 3XSSC PC-1 L18 7 4 7 9 AT4G00810 PC-1 P06 7 4 7 10 3XSSC PC-1 P18 7 4 7 11 At1g77120 alcohol dehydrogenase (ADH) identical to alcohol dehydrogenase GI:469467 from (Arabidopsis thaliana) 7 4 7 12 At1g77160 hypothetical protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 7 4 7 13 At1g77350 expressed protein 7 4 7 14 At1g77405 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 7 15 At1g77580 "myosin heavy chain-related low similarity to SP|P08799 Myosin II heavy chain, non muscle {Dictyostelium discoideum}" 7 4 7 16 At1g77640 "AP2 domain-containing transcription factor, putative Similar to DREB1A (GP:3660548) [Arabidopsis thaliana]" 7 4 7 17 At1g77780 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097946 from [Oryza sativa]" 7 4 7 18 At1g77815 hypothetical protein 7 4 7 19 At1g80390 auxin-responsive AUX/IAA family protein similar to SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7). [Mouse-ear cress] {Arabidopsis thaliana}; contains Pfam profile: PF02309: AUX/IAA family 7 4 7 20 At1g80440 "kelch repeat-containing F-box family protein similar to SP|Q9ER30 Kelch-related protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 4 7 21 At1g80620 ribosomal protein S15 family protein similar to ribosomal protein S15 GB:AAD36415 from [Thermotoga maritima] 7 4 7 22 At1g80680 nucleoporin family protein contains Pfam profile: PF04096 nucleoporin autopeptidase 7 4 7 23 At1g80860 expressed protein 7 4 7 24 At1g80890 expressed protein 7 4 7 25 At2g01080 expressed protein 7 4 8 1 At2g01120 "origin recognition complex subunit 4, putative (ORC4) similar to origin recognition complex subunit 4 (GI:15866782) [Zea mays]" 7 4 8 2 At2g04040 MATE efflux family protein contains Pfam profile: PF01554 uncharacterized membrane protein family 7 4 8 3 At2g04080 MATE efflux family protein similar to hypothetical protein GB:AAC27412; contains Pfam profile PF01554: Uncharacterized membrane protein family 7 4 8 4 At2g04340 expressed protein 7 4 8 5 At2g04395 expressed protein 7 4 8 6 At2g04550 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 7 4 8 7 At2g04630 "DNA-directed RNA polymerase II, putative similar to SP|Q24320 DNA-directed RNA polymerase II 14.4 kDa polypeptide (EC 2.7.7.6) (RPB6) {Drosophila melanogaster}; contains Pfam profile PF01192: RNA polymerases K / 14 to 18 kDa subunit" 7 4 8 8 At2g04845 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 7 4 8 9 At2g04890 scarecrow-like transcription factor 21 (SCL21) 7 4 8 10 At2g12120 "hypothetical protein similar to At2g06630, At1g45090, At2g05470, At5g28482" 7 4 8 11 At2g12280 "ligase, putative identical to residues 550 - 623 of 10-formyltetrahydrofolate synthetase (Formate--tetrahydrofolate ligase (EC 6.3.4.3)) from Arabidopsis thaliana GI:5921663" 7 4 8 12 At2g12935 hypothetical protein 7 4 8 13 At2g13126 hypothetical protein likely a pseudogene 7 4 8 14 At2g13570 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 7 4 8 15 At2g13650 GDP-mannose transporter (GONST1) identical to GDP-mannose transporter SP:Q941R4 from [Arabidopsis thaliana] 7 4 8 16 At2g13900 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 7 4 8 17 At2g14010 hypothetical protein and genefinder 7 4 8 18 At2g17230 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region 7 4 8 19 At2g17280 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 7 4 8 20 At2g17480 "seven transmembrane MLO family protein / MLO-like protein 8 (MLO8) identical to membrane protein Mlo8 [Arabidopsis thaliana] gi|14091586|gb|AAK53801; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 7 4 8 21 At2g17540 expressed protein 7 4 8 22 At2g17705 expressed protein 7 4 8 23 At2g17760 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 7 4 8 24 At2g17930 "FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein contains Pfam profiles PF02259 FAT domain, PF00454 Phosphatidylinositol 3- and 4-kinase, PF02260: FATC domain" 7 4 8 25 At2g17975 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 7 4 9 1 At2g20700 expressed protein 7 4 9 2 At2g20740 expressed protein 7 4 9 3 At2g20840 "secretory carrier membrane protein (SCAMP) family protein contains Pfam domain, PF04144: SCAMP family" 7 4 9 4 At2g20890 expressed protein 7 4 9 5 At2g21050 "amino acid permease, putative similar to AUX1 [Arabidopsis thaliana] GI:1531758; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 7 4 9 6 At2g21110 disease resistance-responsive family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 7 4 9 7 At2g21237 expressed protein 7 4 9 8 At2g21280 expressed protein similar to YfhF (GI:2804536) [Bacillus subtilis] 7 4 9 9 At2g24170 "endomembrane protein 70, putative similar to MURA transposase of maize Mutator transposon" 7 4 9 10 At2g24230 "leucine-rich repeat transmembrane protein kinase, putative " 7 4 9 11 At2g24395 chaperone protein dnaJ-related contains Pfam PF00684 : DnaJ central domain (4 repeats) 7 4 9 12 At2g24450 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan-protein 1 [Arabidopsis thaliana] gi|13377776|gb|AAK20857 7 4 9 13 At2g24610 "cyclic nucleotide-regulated ion channel, putative (CNGC14) similar to cyclic nucleotide and calmodulin-regulated ion channel (GI:4581205) [Arabidopsis thaliana]" 7 4 9 14 At2g24680 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 7 4 9 15 At2g24860 chaperone protein dnaJ-related similar to Tsi1-interacting protein TSIP1 (GI:4337001) [Nicotiana tabacum] 7 4 9 16 At2g24920 expressed protein 7 4 9 17 At2g27610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 9 18 At2g27690 "cytochrome P450, putative similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450; supported by cDNA: gi_13877668" 7 4 9 19 At2g27810 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 7 4 9 20 At2g27860 expressed protein 7 4 9 21 At2g28050 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 9 22 At2g28090 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 7 4 9 23 At2g28260 "cyclic nucleotide-regulated ion channel, putative (CNGC15) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana]" 7 4 9 24 At2g28310 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 7 4 9 25 At2g31035 hypothetical protein 7 4 10 1 At2g31082 Clavata3 / ESR-Related-7 (CLE7) CLAVATA3/ESR-Related 7 (CLE7) 7 4 10 2 At2g31230 "ethylene-responsive factor, putative similar to ethylene response factor 1 GB:AAD03544 GI:4128208 from [Arabidopsis thaliana]" 7 4 10 3 At2g31290 expressed protein 7 4 10 4 At2g31430 invertase/pectin methylesterase inhibitor family protein low similarity to pistil-specific gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 7 4 10 5 At2g31490 expressed protein 7 4 10 6 At2g31660 importin beta-2 subunit family protein similar to D-Importin 7/RanBP7 [Drosophila melanogaster] GI:7542336; contains Pfam profile PF03810: Importin-beta N-terminal domain 7 4 10 7 At2g31720 expressed protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 7 4 10 8 At2g34310 expressed protein 7 4 10 9 At2g34330 expressed protein 7 4 10 10 At2g34450 high mobility group (HMG1/2) family protein similar to HMG protein [Arabidopsis thaliana] GI:2832361; contains Pfam profile PF00505: HMG (high mobility group) box 7 4 10 11 At2g34510 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 7 4 10 12 At2g34655 expressed protein 7 4 10 13 At2g34710 homeobox-leucine zipper transcription factor (HB-14) identical to homeodomain transcription factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis thaliana]; 7 4 10 14 At2g34900 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 7 4 10 15 At2g34960 amino acid permease family protein similar to cationic amino acid transporter 3 [Rattus norvegicus] GI:2116552; contains Pfam profile PF00324: Amino acid permease 7 4 10 16 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 7 4 10 17 At2g37580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 7 4 10 18 At2g37750 expressed protein 7 4 10 19 At2g37780 DC1 domain-containing protein contains Pfam PF03107: DC1 domain 7 4 10 20 At2g37950 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 7 4 10 21 At2g38000 chaperone protein dnaJ-related weak similarity to Chaperone protein dnaJ (Swiss-Prot:Q9ZFC5) [Methylovorus sp.] 7 4 10 22 At2g38170 "calcium exchanger (CAX1) identical to high affinity calcium antiporter CAX1 [Arabidopsis thaliana] gi|9256741|gb|AAB05913, except a possible frameshift at base 58008. Sequence has been confirmed with 5 sequencing reads.; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 7 4 10 23 At2g38185 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 7 4 10 24 At2g40760 rhodanese-like domain-containing protein contains rhodanese-like domain PF00581 7 4 10 25 At2g40810 "WD-40 repeat protein family similar to Gsa12p(GI:18307769)[Pichia pastoris]; contains 3 Pfam PF00400: WD domain, G-beta repeats" 7 4 11 1 At2g40935 "expressed protein low similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 7 4 11 2 At2g40970 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 7 4 11 3 At2g41140 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820" 7 4 11 4 At2g41190 "amino acid transporter family protein low similarity to vesicular GABA transporter [Rattus norvegicus] GI:2587061; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 7 4 11 5 At2g41370 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 7 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 7 4 11 7 At2g43970 La domain-containing protein contains Pfam profile PF05383: La domain 7 4 11 8 At2g44030 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 7 4 11 9 At2g44160 methylenetetrahydrofolate reductase 2 (MTHFR2) identical to SP|O80585 Methylenetetrahydrofolate reductase (EC 1.5.1.20) {Arabidopsis thaliana} 7 4 11 10 At2g44210 expressed protein Pfam profile PF03080: Arabidopsis proteins of unknown function 7 4 11 11 At2g44390 DC1 domain-containing protein EST matches across the predicted intron; maybe a pseudo gene; highly similar to GP|2435515|AF024504; contains Pfam profile PF03107: DC1 domain 7 4 11 12 At2g44450 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 7 4 11 13 At2g44590 "dynamin-like protein D (DL1D) identical to dynamin-like protein D [Arabidopsis thaliana] GI:19569770; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 7 4 11 14 At2g44650 chloroplast chaperonin 10 (cpn10) identical to chloroplast chaperonin 10 GI:14041813 from [Arabidopsis thaliana] 7 4 11 15 At2g47330 "DEAD/DEAH box helicase, putative similar to RNA helicase [Rattus norvegicus] GI:897915; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 7 4 11 16 At2g47380 cytochrome c oxidase subunit Vc family protein / COX5C family protein contains Pfam profile: PF05799 cytochrome c oxidase subunit Vc (COX5C) 7 4 11 17 At2g47530 hypothetical protein 7 4 11 18 At2g47590 "photolyase/blue light photoreceptor (PHR2) identical to photolyase/blue light photoreceptor PHR2 [Arabidopsis thaliana] GI:3319288; contains Pfam domain, PF00875: deoxyribodipyrimidine photolyase" 7 4 11 19 At2g47760 ALG3 family protein contains Pfam profile: PF05208 ALG3 protein 7 4 11 20 At2g47820 expressed protein 7 4 11 21 At2g47940 DegP2 protease (DEGP2) identical to DegP2 protease GI:13172275 from [Arabidopsis thaliana]; identical to cDNA DegP2 protease (DEGP2) nuclear gene for chloroplast product GI:13172274 7 4 11 22 At2g47980 expressed protein 7 4 11 23 At3g03310 lecithin:cholesterol acyltransferase family protein / LACT family protein weak similarity to LCAT-like lysophospholipase (LLPL) [Homo sapiens] GI:4589720; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 7 4 11 24 At3g03370 expressed protein 7 4 11 25 At3g03550 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger domain, C3HC4 type (RING finger) 152633." 7 4 12 1 At3g03610 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 7 4 12 2 At3g03773 expressed protein 7 4 12 3 At3g03820 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 7 4 12 4 At3g03950 expressed protein contains Pfam profile PF04146: YT521-B-like family 7 4 12 5 At3g03990 "esterase/lipase/thioesterase family protein low similarity to 3-oxoadipate enol-lactone hydrolase [Pseudomonas sp. B13] GI:17736948, esterase V [Pseudomonas sp.] GI:402521; contains Interpro entry IPR000379" 7 4 12 6 At3g06530 BAP28-related similar to Protein BAP28 (Swiss-Prot:Q9H583) [Homo sapiens] 7 4 12 7 At3g06570 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 4 12 8 At3g36659 invertase/pectin methylesterase inhibitor family protein similar to extensin-like protein [Zea mays] GI:5917666 7 4 12 9 At3g06710 expressed protein 7 4 12 10 At3g06890 expressed protein 7 4 12 11 At3g06930 protein arginine N-methyltransferase family protein similar to protein arginine methyltransferase [Mus musculus] GI:5257221 7 4 12 12 At3g07100 "protein transport protein Sec24, putative similar to protein transport protein Sec24A (SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486" 7 4 12 13 At3g07160 glycosyl transferase family 48 protein similar to glucan synthase GB:AAD11794 [Filobasidiella neoformans var. neoformans] 7 4 12 14 At3g10190 "calmodulin, putative similar to calmodulin NtCaM13 [Nicotiana tabacum] GI:14625425, calmodulin GB:AAA34015 [Glycine max]; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 7 4 12 15 At3g10250 expressed protein 7 4 12 16 At3g10380 exocyst complex component-related identical to Probable exocyst complex component Sec8 (Swiss-Prot:Q93YU5) [Arabidopsis thaliana]; weak similarity to Exocyst complex component Sec8 (rSec8) (Swiss-Prot:Q62824) [Rattus norvegicus] 7 4 12 17 At3g10420 "sporulation protein-related similar to hypothetical proteins: GB:P51281 [Chloroplast Porphyra purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540 [Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium caldarium]; similar to stage III sporulation protein AA (GI:18145497) [Clostridium perfringens str. 13]; similar to stage III sporulation protein AA (mutants block sporulation after engulfment) (GI:22777578) [Oceanobacillus iheyensis]" 7 4 12 18 At3g10560 "cytochrome P450, putative similar to cytochrome P450 77A3 GB:O48928 [Glycine max]" 7 4 12 19 At3g10595 myb family transcription factor contains similarity to Pfam profile: PF00249 Myb DNA binding domain 7 4 12 20 At3g10730 sad1/unc-84-like 2 family protein contains 1 transmembrane domain; similar to Sad1 unc-84 domain protein 2 (GI:6538749) [Homo sapiens]; similar to Sad1/unc-84-like protein 2 (Fragment) (Swiss-Prot:Q9UH99) [Homo sapiens] 7 4 12 21 At3g10770 expressed protein 7 4 12 22 At3g13220 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter; similar to white protein GB:Q27256 [Anopheles gambiae] 7 4 12 23 At3g13228 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 12 24 At3g13370 hypothetical protein 7 4 12 25 At3g13430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 7 4 13 1 At3g13580 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] 7 4 13 2 At3g13630 hypothetical protein 7 4 13 3 At3g13740 URF 4-related similar to URF 4 (GI:49224) (Swiss-Prot:Q05370)[Synechococcus sp.] 7 4 13 4 At3g13782 nucleosome assembly protein (NAP) family protein similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP) 7 4 13 5 At3g16270 expressed protein gene model 7 4 13 6 At3g16330 expressed protein 7 4 13 7 At3g16510 C2 domain-containing protein contains similarity to shock protein SRC2 [Glycine max] gi|2055230|dbj|BAA19769 ; contains Pfam profile PF00168:C2 domain 7 4 13 8 At3g16540 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 7 4 13 9 At3g16700 "fumarylacetoacetate hydrolase family protein contains Pfam domain, PF01557: fumarylacetoacetate hydrolase family protein" 7 4 13 10 At3g16760 tetratricopeptide repeat (TPR)-containing protein low similarity to TPR-containing protein involved in spermatogenesis TPIS [Mus musculus] GI:6272682; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain 7 4 13 11 At3g16895 expressed protein 7 4 13 12 At3g16950 "dihydrolipoamide dehydrogenase 1, plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical to plastidic lipoamide dehydrogenase from Arabidopsis thaliana [gi:7159282]" 7 4 13 13 At3g19570 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 7 4 13 14 At3g19620 glycosyl hydrolase family 3 protein similar to beta-xylosidase A GB:BAA28267 from [Aspergillus oryzae] 7 4 13 15 At3g19800 expressed protein 7 4 13 16 At3g19860 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 7 4 13 17 At3g20020 protein arginine N-methyltransferase family protein similar to SP|Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens} 7 4 13 18 At3g20070 expressed protein 7 4 13 19 At3g20220 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana]" 7 4 13 20 At3g20270 "lipid-binding serum glycoprotein family protein similar to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain" 7 4 13 21 At3g22990 expressed protein 7 4 13 22 At3g23050 auxin-responsive protein / indoleacetic acid-induced protein 7 (IAA7) identical to SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7) 7 4 13 23 At3g23190 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]" 7 4 13 24 At3g23245 hypothetical protein 7 4 13 25 At3g23390 60S ribosomal protein L36a/L44 (RPL36aA) similar to ribosomal protein L41 GB:AAA34366 from [Candida maltosa] 7 4 14 1 At3g23460 cyclopropane fatty acid synthase-related similar to cyclopropane synthase [Sterculia foetida] GI:21069167 7 4 14 2 At3g23650 protein kinase-related contains similarity to protein kinases 7 4 14 3 At3g23700 "S1 RNA-binding domain-containing protein contains Pfam domain, PF00575: S1 RNA binding domain" 7 4 14 4 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 7 4 14 5 At3g26580 expressed protein 7 4 14 6 At3g26690 "MutT/nudix family protein similar to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 7 4 14 7 At3g26740 "light responsive protein-related similar to light regulated protein precursor SP:Q03200 [Oryza sativa] (Plant Mol. Biol. 22 (1), 165-170 (1993)), ccr protein GB:S52663 [Citrus X paradisi] (Plant Mol. Biol. 26 (1), 165-173 (1994))" 7 4 14 8 At3g26880 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 7 4 14 9 At3g26930 hypothetical protein 7 4 14 10 At3g27090 expressed protein similar to gda-1 [Pisum sativum] GI:2765418 7 4 14 11 At3g27150 "kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646 F-box domain" 7 4 14 12 At3g30250 hypothetical protein 7 4 14 13 At3g30320 hypothetical protein 7 4 14 14 At3g30530 bZIP transcription factor family protein similar to bZIP protein(G/HBF-1) GI:1905785 from [Glycine max ]; contains PFAM profile: bZIP transcription factor PF00170 7 4 14 15 At3g30600 hypothetical protein 7 4 14 16 At3g30775 "proline oxidase, mitochondrial / osmotic stress-responsive proline dehydrogenase (POX) (PRO1) (ERD5) nearly identical to SP|P92983 Proline oxidase, mitochondrial precursor (EC 1.5.3.-) (Osmotic stress- induced proline dehydrogenase) [Arabidopsis thaliana]; identical to cDNA proline oxidase precursor GI:1817543" 7 4 14 17 At3g30842 "ABC transporter protein, putative similar to pleiotropic drug resistance like protein [Nicotiana tabacum] GI:20522008, ABC1 protein [Nicotiana plumbaginifolia] GI:14331118; contains Pfam profile PF00005: ABC transporter" 7 4 14 18 At3g31915 hypothetical protein contains similarity to hypothetical proteins 7 4 14 19 At3g31980 "hypothetical protein low similarity to SP|P07271 DNA repair and recombination protein PIF1, mitochondrial precursor {Saccharomyces cerevisiae}" 7 4 14 20 At3g44785 "U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative contains Pfam profile PF00642 (View Sanger Pfam): Zinc finger C-x8-C-x5-C-x3-H type (and similar); similar to SP:Q94535 Splicing factor U2af 38 kDa subunit (U2 auxiliary factor 38 kDa subunit) Drosophila melanogaster" 7 4 14 21 At3g44830 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to lecithin:cholesterol acyltransferase [Rattus norvegicus] GI:2306762; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 7 4 14 22 At3g45000 SNF7 family protein contains Pfam profile PF03357: SNF7 family 7 4 14 23 At3g45050 expressed protein 7 4 14 24 At3g45210 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 7 4 14 25 At3g45290 "seven transmembrane MLO family protein / MLO-like protein 3 (MLO3) membrane protein Mlo3 [Arabidopsis thaliana] gi|14091576|gb|AAK53796; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 7 4 15 1 At3g45470 zinc finger protein-related contains low similarity to Swiss-Prot:O76924 ariadne-2 protein (Ari-2) [Drosophila melanogaster] 7 4 15 2 At3g45530 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 7 4 15 3 At3g48340 "cysteine proteinase, putative similar to cysteine endopeptidase precursor [Ricinus communis] GI:2944446; contains Pfam profile PF00112: Papain family cysteine protease" 7 4 15 4 At3g48410 "hydrolase, alpha/beta fold family protein low simiilarity to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase [Rhodococcus sp. RHA1] GI:8978311, SP|Q59695|ACOC_PSEPU Dihydrolipoamide acetyltransferase component of acetoin cleaving system (EC 2.3.1.12) (Acetoin dehydrogenase E2 component) {Pseudomonas putida}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 4 15 5 At3g48580 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endoxyloglucan transferase EXGT-A4 GI:5139002 from [Arabidopsis thaliana]" 7 4 15 6 At3g48640 expressed protein 7 4 15 7 At3g48820 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 7 4 15 8 At3g48860 expressed protein 7 4 15 9 At3g49030 F-box family protein contains F-box domain Pfam:PF00646 7 4 15 10 At3g49080 ribosomal protein S9 family protein contains Pfam profile PF00380: ribosomal protein S9 7 4 15 11 At3g51930 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); myosin heavy chain kinase B (SP:P90648)(GI:1903458) [Dictyostelium discoideum] 7 4 15 12 At3g51970 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 7 4 15 13 At3g52105 expressed protein 7 4 15 14 At3g52150 RNA recognition motif (RRM)-containing protein similar to chloroplast RNA-binding protein cp33 [Arabidopsis thaliana] GI:681912; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain 7 4 15 15 At3g52300 "ATP synthase D chain-related contains weak similarity to ATP synthase D chain, mitochondrial (EC 3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]" 7 4 15 16 At3g52350 D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain 7 4 15 17 At3g52525 "ovate protein, putative 83% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568" 7 4 15 18 At3g52560 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 7 4 15 19 At3g55090 "ABC transporter family protein ATP-binding cassette-sub-family G-member 2, Mus musculus, EMBL:AF140218" 7 4 15 20 At3g55140 pectate lyase family protein similar to pollen allergen Amb a 1.3 SP:P27761 from [Ambrosia artemisiifolia] 7 4 15 21 At3g55330 photosystem II reaction center PsbP family protein contains Pfam profile PF01789: PsbP 7 4 15 22 At3g55370 Dof-type zinc finger domain-containing protein 7 4 15 23 At3g55560 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 7 4 15 24 At3g55610 delta 1-pyrroline-5-carboxylate synthetase B / P5CS B (P5CS2) identical to SP|P54888 7 4 15 25 At3g55770 "LIM domain-containing protein similar to pollen specific LIM domain protein 1b [Nicotiana tabacum] GI:6467905, PGPS/D1 [Petunia x hybrida] GI:4105772; contains Pfam profile PF00412: LIM domain" 7 4 16 1 At3g55830 "glycosyltransferase family protein 47 similar to exostose-related protein 2, Homo sapiens, PIR:JC5935 [SP|Q93063], EXTL2, Mus musculus [GI:10443633]" 7 4 16 2 At3g58700 "60S ribosomal protein L11 (RPL11B) ribosomal protein L11, cytosolic, Arabidopsis thaliana, PIR:S49033" 7 4 16 3 At3g58750 "citrate synthase, glyoxysomal, putative strong similarity to SP|P49299 Citrate synthase, glyoxysomal precursor {Cucurbita maxima}; contains Pfam profile PF00285: Citrate synthase" 7 4 16 4 At3g58930 F-box family protein contains F-box domain Pfam:PF00646 7 4 16 5 At3g58990 aconitase C-terminal domain-containing protein contains Pfam profile PF00694: Aconitase C-terminal domain 7 4 16 6 At3g59140 "ABC transporter family protein putative multi resistance protein mrp - Arabidopsis thaliana, EMBL:ATMRPPROT" 7 4 16 7 At3g59200 F-box family protein contains F-box domain Pfam:PF00646 7 4 16 8 At3g59350 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 7 4 16 9 At3g59390 "expressed protein protein CG15643 - Drosophila melanogaster, EMBL:AE003499" 7 4 16 10 At3g62070 "expressed protein hypothetical protein F14M4.23 - Arabidopsis thaliana, PIR:T02193" 7 4 16 11 At3g62130 epimerase-related contains weak similarity to isopenicillin N epimerase (Swiss-Prot:P18549) [Streptomyces clavuligerus] 7 4 16 12 At3g62310 "RNA helicase, putative similar to SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43 (Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 7 4 16 13 At3g62370 expressed protein 7 4 16 14 At3g62540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 16 15 At3g62600 DNAJ heat shock family protein similar to DnaJ homolog subfamily B member 11 precursor (SP:Q99KV1){Mus musculus}; contains Pfam PF00226: DnaJ domain; contains PfaPF01556: DnaJ C terminal regionm 7 4 16 16 At3g62760 "glutathione S-transferase, putative Glutathione transferase III(b) - Zea mays, EMBL:AJ010296" 7 4 16 17 At3g62800 "double-stranded RNA-binding domain (DsRBD)-containing protein weak similarity to SP|P19525 Interferon-induced, double-stranded RNA-activated protein kinase (EC 2.7.1.-) {Homo sapiens}; contains Pfam profile PF00035: Double-stranded RNA binding motif" 7 4 16 18 At4g01670 "expressed protein similar to A. thaliana hypothetical protein F14M4.23, GenBank accession number AC004411" 7 4 16 19 At4g01720 "WRKY family transcription factor similar to wild oat DNA-binding protein ABF2, GenBank accession number Z48431" 7 4 16 20 At4g01890 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:7381227; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 7 4 16 21 At4g01915 expressed protein 7 4 16 22 At4g02050 "sugar transporter, putative similar to SP|Q10710 Sugar carrier protein A {Ricinus communis}, glucose transporter [Saccharum hybrid cultivar H65-7052] GI:347855; contains Pfam profile PF00083: major facilitator superfamily protein" 7 4 16 23 At4g02100 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 7 4 16 24 At4g02235 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); low similarity to APETALA3 homolog PcAP3 [Papaver californicum] GI:3170498 7 4 16 25 At4g02300 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 7 4 17 1 At4g05240 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 7 4 17 2 At4g05300 hypothetical protein 7 4 17 3 At4g05470 F-box family protein (FBL21) contains similarity to N7 protein GI:3273101 from [Medicago truncatula] 7 4 17 4 At4g05540 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 7 4 17 5 At4g06534 hypothetical protein 7 4 17 6 At4g06676 expressed protein ; expression supported by MPSS 7 4 17 7 At4g07450 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 7 4 17 8 At4g07493 hypothetical protein 7 4 17 9 At4g10650 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 7 4 17 10 At4g10710 transcriptional regulator-related similar to chromatin-specific transcription elongation factor FACT 140 kDa subunit (GI:5499741) [Homo sapiens] 7 4 17 11 At4g10870 "hypothetical protein predicted proteins, Arabidopsis thaliana" 7 4 17 12 At4g10925 F-box family protein contains Pfam PF00646: F-box domain 7 4 17 13 At4g11070 "WRKY family transcription factor other putative proteins, Arabidopsis thaliana" 7 4 17 14 At4g11110 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400); similar to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana]; contains non-consensus (GC) donor splice sites at introns 4 and 6 7 4 17 15 At4g11270 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); related to TGF-beta resistance-associated protein TRAG (GI:15624071) {Mus musculus}; similar to beta-transducin repeats containing protein - Homo sapiens,PID:e1284220; 3' EST no_NP:TC8031" 7 4 17 16 At4g11330 "mitogen-activated protein kinase, putative / MAPK, putative (MPK5) similar to mitogen-activated protein kinase homolog 5 (AtMPK5)[Arabidopsis thaliana] SWISS-PROT:Q39025; PMID:12119167; possible internal deletion at position 161, missing one A residue; reference GI:457401" 7 4 17 17 At4g14060 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 7 4 17 18 At4g14103 F-box family protein contains F-box domain Pfam:PF00646 7 4 17 19 At4g14220 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 17 20 At4g14270 expressed protein 7 4 17 21 At4g14385 expressed protein 7 4 17 22 At4g14420 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum] gi|1762945|gb|AAC49975" 7 4 17 23 At4g14580 CBL-interacting protein kinase 4 (CIPK4) identical to CBL-interacting protein kinase 4 [Arabidopsis thaliana] gi|13249503|gb|AAG01367; identical to cDNA calcineurin B-like (CBL) interacting protein kinase 4 (CIPK4) GI:13249502 7 4 17 24 At4g14630 germin-like protein (GLP9) identical to germin-like protein subfamily 1 member 8 [SP|Q9LEA7] 7 4 17 25 At4g16990 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 7 4 18 1 At4g17030 "expansin-related identical to SWISS-PROT:O23547 expansin-related protein 1 precursor (At-EXPR1)[Arabidopsis thaliana]; related to expansins, http://www.bio.psu.edu/expansins/" 7 4 18 2 At4g17200 F-box family protein contains F-box domain Pfam:PF00646 7 4 18 3 At4g17245 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 18 4 At4g17460 homeobox-leucine zipper protein 1 (HAT1) / HD-ZIP protein 1 identical to Homeobox-leucine zipper protein HAT1 (SP:P46600) [Arabidopsis thaliana] 7 4 18 5 At4g17500 "ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein identical to SP|O80337 Ethylene responsive element binding factor 1 (EREBP-2 protein) [Arabidopsis thaliana]; a false single bp exon was added to circumvent a single basepair insertion in the genomic sequence, supported by cDNA/genome alignment." 7 4 18 6 At4g17620 glycine-rich protein 7 4 18 7 At4g17690 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781336|emb|CAA71495" 7 4 18 8 At4g20290 expressed protein 7 4 18 9 At4g20340 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein contains Pfam profile: PF02002 TFIIE alpha subunit 7 4 18 10 At4g20500 expressed protein 7 4 18 11 At4g20680 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 7 4 18 12 At4g20850 subtilase family protein contains similarity to Tripeptidyl-peptidase II (EC 3.4.14.10) (TPP-II) (Tripeptidyl aminopeptidase) (Swiss-Prot:P29144) [Homo sapiens] 7 4 18 13 At4g20910 double-stranded RNA binding protein-related / DsRBD protein-related contains weak similarity to Pfam profile PF00035: Double-stranded RNA binding motif 7 4 18 14 At4g21090 "adrenodoxin-like ferredoxin 1 similar to SP|P10109 Adrenodoxin, mitochondrial precursor (Adrenal ferredoxin) (Hepatoredoxin) from Homo sapiens, SP|P29330 Adrenodoxin (Adrenal ferredoxin) from Ovis aries; contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domains; identical to GI:28192428" 7 4 18 15 At4g21140 expressed protein ; expression supported by MPSS 7 4 18 16 At4g23720 expressed protein ; expression supported by MPSS 7 4 18 17 At4g23770 expressed protein 7 4 18 18 At4g23930 "expressed protein hin1 protein homolog, Oryza sativa, PIR:T02662" 7 4 18 19 At4g23970 hypothetical protein 7 4 18 20 At4g24140 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas putida] GI:2822275, hydroxymuconic semialdehyde hydrolase, Pseudomonas stutzeri, AF039534; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 4 18 21 At4g24180 pathogenesis-related thaumatin family protein similar to SP|P28493 Pathogenesis-related protein 5 precursor (PR-5) {Arabidopsis thaliana}; contains Pfam profile PF00314: Thaumatin family 7 4 18 22 At4g24300 "hypothetical protein hypothetical protein - Arabidopsis thaliana, PIR2:T05128" 7 4 18 23 At4g24370 expressed protein 7 4 18 24 At4g26940 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 7 4 18 25 At4g26980 expressed protein 7 4 19 1 At4g27140 2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1 identical to SP|P15457 7 4 19 2 At4g27220 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 7 4 19 3 At4g27400 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 7 4 19 4 At4g27440 "protochlorophyllide reductase B, chloroplast / PCR B / NADPH-protochlorophyllide oxidoreductase B (PORB) identical to SP:P21218 protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) [Arabidopsis thaliana]" 7 4 19 5 At4g27600 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 7 4 19 6 At4g27620 expressed protein 7 4 19 7 At4g30220 "small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative similar to SWISS-PROT:Q15356 small nuclear ribonucleoprotein F (snRNP-F, Sm protein F, Sm-F, SmF) [Mouse]" 7 4 19 8 At4g30280 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana]" 7 4 19 9 At4g30440 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 7 4 19 10 At4g30480 tetratricopeptide repeat (TPR)-containing protein similar to SP|Q99614 Tetratricopeptide repeat protein 1 {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 7 4 19 11 At4g30640 F-box family protein (FBL19) contains similarity to SKP1 interacting partner 1 GI:10716947 from [Arabidopsis thaliana] 7 4 19 12 At4g30700 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 7 4 19 13 At4g30825 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 19 14 At4g30880 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 7 4 19 15 At4g33400 dem protein-related / defective embryo and meristems protein-related identical to dem GI:2190419 from [Lycopersicon esculentum] 7 4 19 16 At4g33460 "ABC transporter family protein ABC-type transport protein sll1623 -Synechocystis,PIR2:S74812" 7 4 19 17 At4g33610 glycine-rich protein 7 4 19 18 At4g33650 dynamin-like protein 2a (ADL2a) identical to dynamin like protein 2a (ADL2a) [Arabidopsis thaliana] GI:19032337; supported by cDNA gi:19032336 7 4 19 19 At4g33820 glycosyl hydrolase family 10 protein similar to tapetum-specific endoxylanase [Zea mays] GI:7920155; contains Pfam profile PF00331: Glycosyl hydrolase family 10 7 4 19 20 At4g33870 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781334|emb|CAA71494" 7 4 19 21 At4g34000 "ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) / ABA-responsive elements-binding factor (ABF3) identical to abscisic acid responsive elements-binding factor (ABF3) GI:6739280 from [Arabidopsis thaliana]; identical to cDNA abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds GI:6739279" 7 4 19 22 At4g34050 "caffeoyl-CoA 3-O-methyltransferase, putative nearly identical to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa] isoform contains a GT-TG intron which removes an internal segment of the protein." 7 4 19 23 AT5G57480 PC-1 D06 7 4 19 24 3XSSC PC-1 D18 7 4 19 25 AT1G29930 PC-1 H06 7 4 20 1 3XSSC PC-1 H18 7 4 20 2 AT3G44150 PC-1 L06 7 4 20 3 3XSSC PC-1 L18 7 4 20 4 AT4G00810 PC-1 P06 7 4 20 5 3XSSC PC-1 P18 7 4 20 6 At4g36610 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas fluorescens] GI:1871461; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 4 20 7 At4g36650 "transcription factor IIB (TFIIB) family protein contains Pfam domain, PF00382: Transcription factor TFIIB repeat" 7 4 20 8 At4g36790 "transporter-related low similarity to spinster membrane proteins from [Drosophila melanogaster] GI:12003976, GI:12003972, GI:12003974, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein" 7 4 20 9 At4g36850 PQ-loop repeat family protein / transmembrane family protein similar to SP|Q10482 Seven transmembrane protein 1 {Schizosaccharomyces pombe}; contains Pfam profile PF04193: PQ loop repeat 7 4 20 10 At4g37020 expressed protein 7 4 20 11 At4g37080 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 7 4 20 12 At4g37240 expressed protein 7 4 20 13 At4g37295 expressed protein 7 4 20 14 At4g39890 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 7 4 20 15 At4g39950 "cytochrome P450 79B2, putative (CYP79B2) identical to cytochrome P450 (79B2) SP:O81346 from [Arabidopsis thaliana]" 7 4 20 16 At4g40090 arabinogalactan-protein (AGP3) InDels between the genome sequence and the cDNA prevent identical translations from being annotated; the basis for this is under investigation. 7 4 20 17 At5g01020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 7 4 20 18 At5g01190 "laccase, putative / diphenol oxidase, putative similar to diphenol oxidase [Nicotiana tabacum][GI:1685087]" 7 4 20 19 At5g01230 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 7 4 20 20 At5g01380 expressed protein 7 4 20 21 At5g01440 insulin-degrading enzyme-related contains weak similarity to Swiss-Prot:P14735 insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin protease) [Homo sapiens] 7 4 20 22 At5g04140 glutamate synthase (GLU1) / ferredoxin-dependent glutamate synthase (Fd-GOGAT 1) identical to ferredoxin-dependent glutamate synthase precursor [Arabidopsis thaliana] GI:3869251 7 4 20 23 At5g04200 "latex-abundant protein, putative (AMC9) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain" 7 4 20 24 At5g04380 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 7 4 20 25 At5g04430 "KH domain-containing protein NOVA, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70477" 7 4 21 1 At5g04620 "aminotransferase class I and II family protein similar to 8-amino-7-oxononanoate synthase, Bacillus sphaericus, PIR:JQ0512 [SP|P22806], Bacillus subtilis [SP|P53556]; contains Pfam protile PF00155 aminotransferase, classes I and II" 7 4 21 2 At5g04680 expressed protein 7 4 21 3 At5g04830 expressed protein 7 4 21 4 At5g04885 "glycosyl hydrolase family 3 protein contains Pfam profiles PF00933: Glycosyl hydrolase family 3 N terminal domain, PF01915: Glycosyl hydrolase family 3 C terminal domain" 7 4 21 5 At5g07430 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 7 4 21 6 At5g07480 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase 1 [SP|Q96330], 2-oxoglutarate-dependent dioxygenase - Solanum chacoense, EMBL:AF104925; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 7 4 21 7 At5g07660 structural maintenance of chromosomes (SMC) family protein similar to SMC-like protein (MIM) [Arabidopsis thaliana] GI:5880614; contains Pfam profile PF02463: RecF/RecN/SMC N terminal domain 7 4 21 8 At5g07710 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 7 4 21 9 At5g07910 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 7 4 21 10 At5g07970 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 7 4 21 11 At5g08139 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 21 12 At5g08170 porphyromonas-type peptidyl-arginine deiminase family protein contains Pfam PF04371: Porphyromonas-type peptidyl-arginine deiminase 7 4 21 13 At5g11210 "glutamate receptor family protein (GLR2.5) plant glutamate receptor family, PMID:11379626" 7 4 21 14 At5g11270 expressed protein 7 4 21 15 At5g11440 hypothetical protein 7 4 21 16 At5g11500 expressed protein contains Pfam profile PF05670: Domain of unknown function (DUF814) 7 4 21 17 At5g11660 "hypothetical protein many predicted proteins, Arabidopsis thaliana" 7 4 21 18 At5g11720 alpha-glucosidase 1 (AGLU1) identical to alpha-glucosidase 1 [Arabidopsis thaliana] GI:2323344 7 4 21 19 At5g11900 eukaryotic translation initiation factor SUI1 family protein similar to SP|O43583 Density-regulated protein (DRP1 protein) (Smooth muscle cell associated protein-3) {Homo sapiens}; contains Pfam profile PF01253: Translation initiation factor SUI1 7 4 21 20 At5g11960 expressed protein 7 4 21 21 At5g15100 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 7 4 21 22 At5g15160 bHLH family protein 7 4 21 23 At5g15310 myb family transcription factor contains PFAM profile: myb DNA-binding domain PF00249 7 4 21 24 At5g15380 "cytosine methyltransferase, putative similar to cytosine methyltransferase [Arabidopsis thaliana] GI:7658293; contains Pfam profile PF00627: UBA/TS-N domain" 7 4 21 25 At5g15540 "expressed protein low similarity to DNA repair and meiosis protein Rad9 [Coprinus cinereus] GI:1353390, SP|Q09725 Sister chromatid cohesion protein mis4 {Schizosaccharomyces pombe}" 7 4 22 1 At5g15580 "expressed protein unknown protein F14P3.18 - Arabidopsis thaliana, EMBL:AC009755" 7 4 22 2 At5g15740 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 7 4 22 3 At5g15790 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 22 4 At5g18420 "expressed protein non-consensus GC donor splice site at exon 1, unknown (C40) protein, Homo sapiens, EMBL:AF103798" 7 4 22 5 At5g18475 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 22 6 At5g18630 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 7 4 22 7 At5g18650 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 7 4 22 8 At5g18810 "SC35-like splicing factor, 28 kD (SCL28) nearly identical to SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana] GI:9843655; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 7 4 22 9 At5g18860 inosine-uridine preferring nucleoside hydrolase family protein contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase 7 4 22 10 At5g19020 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 22 11 At5g19050 expressed protein 7 4 22 12 At5g22400 "rac GTPase activating protein, putative similar to rac GTPase activating protein 1 [Lotus japonicus] GI:3695059; contains Pfam profile PF00620: RhoGAP domain" 7 4 22 13 At5g22460 "esterase/lipase/thioesterase family protein low similarity to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase [Rhodococcus sp. RHA1] GI:8978311, SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}; contains Interpro entry IPR000379" 7 4 22 14 At5g22610 F-box family protein contains F-box domain Pfam:PF00646 7 4 22 15 At5g22650 "expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4;" 7 4 22 16 At5g22820 expressed protein 7 4 22 17 At5g22870 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related weak similarity to hin1 [Nicotiana tabacum] GI:1619321 7 4 22 18 At5g23040 expressed protein similar to unknown protein (emb|CAB62636.1) 7 4 22 19 At5g23090 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) identical to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 7 4 22 20 At5g25757 expressed protein 7 4 22 21 At5g25800 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 7 4 22 22 At5g25980 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to thioglucosidase (GI:871992) [Arabidopsis thaliana]; similar to myrosinase precursor (EC 3.2.3.1)(Sinigrinase) (Thioglucosidase) SP|P37702 from [Arabidopsis thaliana] 7 4 22 23 At5g26030 "ferrochelatase I identical to Swiss-Prot:P42043 ferrochelatase I, chloroplast/mitochondrial precursor (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase) [Arabidopsis thaliana]" 7 4 22 24 At5g26180 NOL1/NOP2/sun family protein similar to NOL1R [Homo sapiens] GI:16226071; contains Pfam profile PF01189: NOL1/NOP2/sun family 7 4 22 25 At5g26230 "expressed protein predicted protein, Arabidopsis thaliana" 7 4 23 1 At5g26667 uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) identical to uridylate kinase / UMP/CMP kinase SP:O04905 from [Arabidopsis thaliana] 7 4 23 2 At5g26740 expressed protein contains Pfam profile PF03619: Domain of unknown function 7 4 23 3 At5g33220 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 7 4 23 4 At5g33303 hypothetical protein 7 4 23 5 At5g34500 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 7 4 23 6 At5g34838 "hypothetical protein contains Pfam domain, PF04827: Protein of unknown function (DUF635)" 7 4 23 7 At5g34970 "hypothetical protein similar to At5g36850, At1g27780, At2g05560, At3g42730, At1g52020, At2g14770, At3g43390, At3g24390, At1g34740, At1g25886, At4g03300, At4g05280" 7 4 23 8 At5g35040 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 7 4 23 9 At5g35270 cytochrome P-450 aromatase-related similar to minor outer capsid protein VP4 (GI:13446784) [Human rotavirus C]; similar to cytochrome P-450 aromatase (GI:21170) [Gallus gallus]; 7 4 23 10 At5g35330 methyl-CpG-binding domain-containing protein similar to methyl-CpG binding protein MBD4 [Mus musculus] GI:3800807; contains Pfam profile PF01429: Methyl-CpG binding domain 7 4 23 11 At5g38460 "ALG6, ALG8 glycosyltransferase family protein similar to SP|Q9Y672 Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase) {Homo sapiens}; contains Pfam profile PF03155: ALG6, ALG8 glycosyltransferase family" 7 4 23 12 At5g38520 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Terrabacter sp. DBF63] GI:14196240; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 7 4 23 13 At5g38680 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 4 23 14 At5g38740 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 7 4 23 15 At5g38920 hypothetical protein 7 4 23 16 At5g38970 "cytochrome P450, putative similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum};" 7 4 23 17 At5g39160 germin-like protein (GLP2a) (GLP5a) identical to germin-like protein subfamily 1 member 18 SP|P92999 [PMID:9869400] 7 4 23 18 At5g39210 expressed protein 7 4 23 19 At5g42050 expressed protein similar to gda-1 [Pisum sativum] GI:2765418 7 4 23 20 At5g42090 expressed protein 7 4 23 21 At5g42250 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon esculentum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 7 4 23 22 At5g42310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 23 23 At5g42480 DNAJ plastid division protein (ARC6) almost identical to dnaJ plastid division protein ARC6 (GI:33436339) [Arabidopsis thaliana];low similarity to cell division protein Ftn2 [Synechococcus sp. PCC 7942] GI:16226084; contains Pfam profile PF00226: DnaJ domain 7 4 23 24 At5g42540 5'-3' exoribonuclease (XRN2) identical to XRN2 [Arabidopsis thaliana] GI:11875630; contains Pfam domain PF03159: Putative 5'-3' exonuclease domain 7 4 23 25 At5g42710 hypothetical protein 7 4 24 1 At5g42770 Maf family protein contains Pfam domain PF02545: Maf-like protein 7 4 24 2 At5g45310 expressed protein 7 4 24 3 At5g45350 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 7 4 24 4 At5g45510 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 7 4 24 5 At5g45570 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At4g08430, At5g28235" 7 4 24 6 At5g45710 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 7 4 24 7 At5g45760 transducin family protein / WD-40 repeat family protein 7 4 24 8 At5g45910 "GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 7 4 24 9 At5g45970 Rac-like GTP-binding protein (ARAC2) identical to RAC-like GTP binding protein ARAC2 SP:Q38903 7 4 24 10 At5g48545 histidine triad family protein / HIT family protein contains Pfam profile PF01230:HIT domain; contains Prosite motif PS00892: HIT family signature. 7 4 24 11 At5g48590 expressed protein 7 4 24 12 At5g48720 expressed protein 7 4 24 13 At5g48780 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 7 4 24 14 At5g48950 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 7 4 24 15 At5g49000 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 7 4 24 16 At5g49170 expressed protein similar to unknown protein (gb|AAF63814.1) 7 4 24 17 At5g49215 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase [Brassica napus] GI:1212786; contains PF00295: Glycosyl hydrolases family 28 7 4 24 18 At5g51930 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 7 4 24 19 At5g51990 "DRE-binding protein, putative / CRT/DRE-binding factor, putative similar to DREB1C GI:3738228 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain" 7 4 24 20 At5g52150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 24 21 At5g52210 "ADP-ribosylation factor, putative similar to arf-related protein (ARP) (SP:Q63055){Rattus norvegicus}; contains Pfam domain PF00025: ADP-ribosylation factor family" 7 4 24 22 At5g52380 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 7 4 24 23 At5g52440 HCF106 protein identical to HCF106 [Arabidopsis thaliana] GI:4894914; contains Pfam profile PF02416: mttA/Hcf106 family 7 4 24 24 At5g52600 "myb family transcription factor (MYB82) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB82) mRNA, partial cds GI:3941515" 7 4 24 25 At5g52660 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA-binding domain 7 4 25 1 At5g55320 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to wax synthase [Simmondsia chinensis] GI:5020219 [EC 2.3.1.75] 7 4 25 2 At5g55380 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to wax synthase [gi:5020219] from Simmondsia chinensis 7 4 25 3 At5g55550 RNA recognition motif (RRM)-containing protein similar to DAZ associated protein 1 [Homo sapiens] GI:8671754; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 7 4 25 4 At5g55600 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain and PF05641: Agenet domain 7 4 25 5 At5g55750 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 7 4 25 6 At5g55810 "nicotinamide-nucleotide adenylyltransferase, putative / NAD(+) pyrophosphorylase, putative similar to nicotinamide mononucleotide adenylyl transferase [Homo sapiens] GI:11245478; contains Pfam profile PF01467: Cytidylyltransferase" 7 4 25 7 At5g55970 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 7 4 25 8 At5g56030 heat shock protein 81-2 (HSP81-2) nearly identical to SP|P55737 Heat shock protein 81-2 (HSP81-2) {Arabidopsis thaliana} 7 4 25 9 At5g58610 "PHD finger transcription factor, putative " 7 4 25 10 At5g58670 phosphoinositide-specific phospholipase C (PLC1) identical to phosphoinositide specific phospholipase C [Arabidopsis thaliana] GI:902923 7 4 25 11 At5g58830 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 7 4 25 12 At5g58890 "MADS-box family protein various predicted proteins, Oryza sativa and Arabidopsis thaliana" 7 4 25 13 At5g59050 expressed protein 7 4 25 14 At5g59090 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 7 4 25 15 At5g59240 "40S ribosomal protein S8 (RPS8B) 40S ribosomal protein S8, Prunus armeniaca, EMBL:AF071889" 7 4 25 16 At5g59300 "ubiquitin-conjugating enzyme 7 (UBC7) E2; identical to gi:992703, SP:P42747" 7 4 25 17 At5g61920 hypothetical protein 7 4 25 18 At5g61980 ARF GTPase-activating domain-containing protein similar to GCN4-complementing protein (GCP1) GI:6465806 from [Arabidopsis thaliana] 7 4 25 19 At5g62150 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 7 4 25 20 At5g62190 "DEAD box RNA helicase (PRH75) nearly identical to RNA helicase [Arabidopsis thaliana] GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 7 4 25 21 At5g62370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 7 4 25 22 At5g62430 Dof-type zinc finger domain-containing protein similar to H-protein promoter binding factor-2a GI:3386546 from [Arabidopsis thaliana] 7 4 25 23 At5g62575 expressed protein 7 4 25 24 At5g62630 expressed protein 7 4 25 25 At5g65180 "expressed protein contains Pfam domain, PF04818: Protein of unknown function, DUF618" 7 4 26 1 At5g65210 bZIP family transcription factor (TGA1) identical to transcription factor (TGA1) GI:16550 from [Arabidopsis thaliana] 7 4 26 2 At5g65390 arabinogalactan-protein (AGP7) 7 4 26 3 At5g65430 "14-3-3 protein GF14 kappa (GRF8) identical to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from [Arabidopsis thaliana]" 7 4 26 4 At5g65600 "legume lectin family protein / protein kinase family protein contains Pfam domains PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 7 4 26 5 At5g65660 hydroxyproline-rich glycoprotein family protein 7 4 26 6 At5g65810 expressed protein similar to unknown protein (emb CAB66910.1) 7 4 26 7 At5g65870 phytosulfokines 5 (PSK5) identical to phytosulfokines 5 (PSK5) from [Arabidopsis thaliana] 7 4 26 8 ath-MIR157c miRNA gene Arabidopsis thaliana miR157c stem-loop 7 4 26 9 ath-MIR166b miRNA gene Arabidopsis thaliana miR166b stem-loop 7 4 26 10 ath-MIR169e miRNA gene Arabidopsis thaliana miR169e stem-loop 7 4 26 11 3xSSC 3xSSC 7 4 26 12 3xSSC 3xSSC 7 4 26 13 3xSSC 3xSSC 7 4 26 14 3xSSC 3xSSC 7 4 26 15 3xSSC 3xSSC 7 4 26 16 At3g44785 "U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative contains Pfam profile PF00642 (View Sanger Pfam): Zinc finger C-x8-C-x5-C-x3-H type (and similar); similar to SP:Q94535 Splicing factor U2af 38 kDa subunit (U2 auxiliary factor 38 kDa subunit) Drosophila melanogaster" 7 4 26 17 At3g44830 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to lecithin:cholesterol acyltransferase [Rattus norvegicus] GI:2306762; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 7 4 26 18 At3g45000 SNF7 family protein contains Pfam profile PF03357: SNF7 family 7 4 26 19 At3g45050 expressed protein 7 4 26 20 At3g45210 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 7 4 26 21 At3g45290 "seven transmembrane MLO family protein / MLO-like protein 3 (MLO3) membrane protein Mlo3 [Arabidopsis thaliana] gi|14091576|gb|AAK53796; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 7 4 26 22 At3g45470 zinc finger protein-related contains low similarity to Swiss-Prot:O76924 ariadne-2 protein (Ari-2) [Drosophila melanogaster] 7 4 26 23 At3g45530 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 7 4 26 24 Blank Blank 7 4 26 25 Blank Blank 8 1 1 1 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 8 1 1 2 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 8 1 1 3 Alien2 Control: Stratagene Spotreport Alien Oligo 8 1 1 4 Alien8 Control: Stratagene Spotreport Alien Oligo 8 1 1 5 atc04 Randomly generated negative control 8 1 1 6 atc10 Randomly generated negative control 8 1 1 7 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 8 1 1 8 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 8 1 1 9 At1g01020 transmembrane ARV1-like family protein contains similarity to ARV1 [Homo sapiens] gi|12044055|gb|AAG47671 8 1 1 10 At1g01070 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 8 1 1 11 At1g01210 "DNA-directed RNA polymerase III family protein similar to SP|O13896 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS)" 8 1 1 12 At1g01260 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 8 1 1 13 At1g01460 phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase 8 1 1 14 At1g01510 "C-terminal binding protein (ANGUSTIFOLIA) nearly identical to C-terminal binding protein ANGUSTIFOLIA [Arabidopsis thaliana] GI:15408535; contains Pfam profile PF02826: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain" 8 1 1 15 At1g01680 U-box domain-containing protein 8 1 1 16 At1g01730 expressed protein 8 1 1 17 At1g04310 "ethylene receptor-related similar to ethylene receptor CS-ETR2 [Cucumis sativus] GI:6136818; contains Pfam profiles PF01590: GAF domain, PF00512: His Kinase A (phosphoacceptor) domain" 8 1 1 18 At1g04380 "2-oxoglutarate-dependent dioxygenase, putative Strong similarity to Arabidopsis 2A6 (gb|X83096), tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 8 1 1 19 At1g04550 auxin-responsive protein / indoleacetic acid-induced protein 12 (IAA12) identical to SP|Q38830 Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) {Arabidopsis thaliana} 8 1 1 20 At1g04590 expressed protein isoform contains GG acceptor splice site at intron 7 8 1 1 21 At1g04760 synaptobrevin family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana} 8 1 1 22 At1g04820 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] 8 1 1 23 At1g04970 "lipid-binding serum glycoprotein family protein low similarity to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain" 8 1 1 24 At1g05010 "1-aminocyclopropane-1-carboxylate oxidase / ACC oxidase / ethylene-forming enzyme (ACO) (EAT1) Identical to 1-aminocyclopropane-1-carboxylate oxidase (ACC oxidase) gb|X66719 (EAT1). ESTs gb|T43073, gb|T5714, gb|R90435, gb|R44023, gb|AA597926, gb|AI099676, gb|AA650810 and gb|29725 come from this gene" 8 1 1 25 At1g07620 GTP1/OBG family protein similar to SP|P20964 Spo0B-associated GTP-binding protein {Bacillus subtilis}; contains Pfam profile PF01018: GTP1/OBG family 8 1 2 1 At1g07670 "calcium-transporting ATPase 4, endoplasmic reticulum-type (ECA4) identical to SP|Q9XES1 Calcium-transporting ATPase 4, endoplasmic reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana); contains InterPro Accession IPR006069: Cation transporting ATPase" 8 1 2 2 At1g07780 phosphoribosylanthranilate isomerase 1 (PAI1) identical to gi:619751 8 1 2 3 At1g07820 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 8 1 2 4 At1g07960 thioredoxin family protein low similarity to protein disulfide isomerase 4 [Giardia intestinalis] GI:13489047; contains Pfam profile PF00085: Thioredoxin 8 1 2 5 At1g07985 Expressed protein 8 1 2 6 At1g08110 "lactoylglutathione lyase, putative / glyoxalase I, putative similar to lactoylglutathione lyase SP:O04885 from [Brassica juncea]" 8 1 2 7 At1g08150 sodium/hydrogen exchanger family protein contains InterPro entry IPR006153: Sodium/hydrogen exchanger 8 1 2 8 At1g10740 expressed protein 8 1 2 9 At1g10790 hypothetical protein contains similarity to envelope glycoproteins 8 1 2 10 At1g10950 "endomembrane protein 70, putative " 8 1 2 11 At1g10990 expressed protein and genscan 8 1 2 12 At1g11180 "secretory carrier membrane protein (SCAMP) family protein contains Pfam domain, PF04144: SCAMP family" 8 1 2 13 At1g11240 expressed protein 8 1 2 14 At1g11390 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 8 1 2 15 At1g11430 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor [Garden snapdragon] SWISS-PROT:Q38732" 8 1 2 16 At1g14210 ribonuclease T2 family protein contains similarity to RNase GI:7768564 from [Nicotiana tabacum]; contains Pfam profile PF00445: Ribonuclease T2 family 8 1 2 17 At1g14260 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 1 2 18 At1g14400 "ubiquitin-conjugating enzyme 1 (UBC1) E2; identical to gi:431259, SP:P25865" 8 1 2 19 At1g14460 DNA polymerase-related weak similarity to DNA polymerase III holoenzyme tau subunit [Thermus thermophilus] GI:2583049 8 1 2 20 At1g14630 hypothetical protein 8 1 2 21 At1g14685 expressed protein 8 1 2 22 At1g14810 "semialdehyde dehydrogenase family protein similar to SP:O31219 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH) {Legionella pneumophila}; contains Pfam profiles PF02774: Semialdehyde dehydrogenase dimerisation domain, PF01118: Semialdehyde dehydrogenase NAD binding domain" 8 1 2 23 At1g14840 expressed protein 8 1 2 24 At1g17530 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 8 1 2 25 At1g17590 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 8 1 3 1 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 8 1 3 2 At1g17780 expressed protein 8 1 3 3 At1g17940 expressed protein 8 1 3 4 At1g17990 "12-oxophytodienoate reductase, putative similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]" 8 1 3 5 At1g18200 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 8 1 3 6 At1g18265 expressed protein 8 1 3 7 At1g21120 "O-methyltransferase, putative similar to GI:2781394" 8 1 3 8 At1g21190 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to SWISS-PROT:Q9Y4Z1 U6 snRNA-associated Sm-like protein LSm3 (MDS017) [Mouse]" 8 1 3 9 At1g21360 expressed protein 8 1 3 10 At1g21410 F-box family protein similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 8 1 3 11 At1g21610 wound-responsive family protein similar to wound-responsive protein 14.05 (GI:16506638) [Castanea sativa]; ESTs gb T42839 and gb|AA395192 come from this gene 8 1 3 12 At1g21670 expressed protein similar to TolB protein precursor (SP:P50601) {Pseudomonas aeruginosa} 8 1 3 13 At1g21830 expressed protein EST gb|T21171 comes from this gene 8 1 3 14 At1g21880 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 8 1 3 15 At1g24450 ribonuclease III family protein contains similarity to Swiss-Prot:P51837 ribonuclease III (EC 3.1.26.3) (RNase III) [Coxiella burnetii] 8 1 3 16 At1g24510 "T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 8 1 3 17 At1g24793 "UDP-3-0-acyl N-acetylglucosamine deacetylase family protein / F-box protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain and weak hit to Pfam PF00646: F-box domain; similar to ESTs dbj AV442495.1, gb|BE522756.1, gb|T42945.1, gb|BE525268.1, gb|BE523201.1, gb|BE526298.1, gb|T42945.1, gb|AA651584.1, dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1" 8 1 3 18 At1g24996 "expressed protein nearly identical to At1g25170, At1g25097, At1g24822; similar to ESTs dbj AV530941.1, dbj|AV530975.1, gb|BE037999.1, gb|BE037993.1, gb|AI995009.1, gb|AI099531.1, gb|N37906.1, gb|T76894.1" 8 1 3 19 At1g25330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 8 1 3 20 At1g25380 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 8 1 3 21 At1g25540 phytochrome and flowering time regulatory protein (PFT1) PMID: 12815435 8 1 3 22 At1g25886 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At4g03300" 8 1 3 23 At1g28760 expressed protein ; expression supported by MPSS 8 1 3 24 At1g29030 apoptosis inhibitory 5 (API5) family protein contains Pfam profile PF05918: Apoptosis inhibitory protein 5 (API5) 8 1 3 25 At1g29200 hypothetical protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 8 1 4 1 At1g29270 expressed protein 8 1 4 2 At1g29410 "phosphoribosylanthranilate isomerase, putative strong similarity to GI:619749 from [Arabidopsis thaliana] (Plant Cell 7 (4), 447-461 (1995))" 8 1 4 3 At1g29470 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 8 1 4 4 At1g29660 "GDSL-motif lipase/hydrolase family protein low similarity to family II lipase EXL1 [Arabidopsis thaliana] GI:15054382; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 8 1 4 5 At1g29720 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 8 1 4 6 At1g32560 "late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein contains Pfam domain, PF03760: Late embryogenesis abundant (LEA) group 1" 8 1 4 7 At1g32630 expressed protein 8 1 4 8 At1g32790 "RNA-binding protein, putative similar to RNA-binding protein GB:CAB40027 GI:4539439 from [Arabidopsis thaliana]" 8 1 4 9 At1g32860 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]" 8 1 4 10 At1g33040 "nascent polypeptide-associated complex (NAC) domain-containing protein similar to alpha-NAC, non-muscle form [Mus musculus] GI:1666690; contains Pfam profile PF01849: NAC domain" 8 1 4 11 At1g33080 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 8 1 4 12 At1g33290 sporulation protein-related isoform contains non-consensus AT-donor acceptor site at intron 6; similar to Stage III sporulation protein AA. (Swiss-Prot:Q01367) [Bacillus subtilis]; similar to SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to stage III sporulation protein AA (GI:18145497) [Clostridium perfringens str. 13] 8 1 4 13 At1g33350 pentatricopeptide (PPR) repeat-containing protein contains multiple Pfam domains: PF01535: PPR repeat 8 1 4 14 At1g42480 expressed protein 8 1 4 15 At1g42630 zinc knuckle (CCHC-type) family protein contains Pfam profile PF00098: Zinc knuckle 8 1 4 16 At1g43170 60S ribosomal protein L3 (RPL3A) identical to ribosomal protein GI:166858 from [Arabidopsis thaliana] 8 1 4 17 At1g43310 "triose phosphate/phosphate translocator-related similar to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 8 1 4 18 At1g43670 "fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative very strong similarity to SP|P46267 Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6- bisphosphate 1-phosphohydrolase) (FBPase) {Brassica napus}; contains Pfam profile PF00316: fructose-1,6-bisphosphatase" 8 1 4 19 At1g43722 hypothetical protein 8 1 4 20 At1g43950 "auxin-responsive factor, putative similar to auxin response factor 9 [Arabidopsis thaliana] GI:4580575; contains Pfam profile PF02362: B3 DNA binding domain; non-consensus TT donor splice site at exon 5" 8 1 4 21 At1g44020 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 1 4 22 At1g49120 "AP2 domain-containing transcription factor, putative similar to ethylene-responsive element binding factor GI:8809573 from [Nicotiana sylvestris]" 8 1 4 23 At1g49180 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 8 1 4 24 At1g49360 F-box family protein contains Pfam PF00646: F-box domain 8 1 4 25 At1g49420 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 8 1 5 1 At1g49620 kip-related protein 7 (KRP7) / cyclin-dependent kinase inhibitor 7 (ICK7) identical to cyclin-dependent kinase inhibitor 7 (krp7) [Arabidopsis thaliana] GI:14422297 8 1 5 2 At1g49660 expressed protein 8 1 5 3 At1g49850 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 1 5 4 At1g49910 "WD-40 repeat family protein / mitotic checkpoint protein, putative contains 5 WD-40 repeats (PF00400) (1 weak); similar to testis mitotic checkpoint protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]" 8 1 5 5 At1g52760 "esterase/lipase/thioesterase family protein low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 8 1 5 6 At1g52820 "2-oxoglutarate-dependent dioxygenase, putative similar to AOP1 [Arabidopsis lyrata][GI:16118889]; contains Pfam profile PF03171: 2OG-Fe(II) oxygenase superfamily domain" 8 1 5 7 At1g52960 "hypothetical protein very low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 8 1 5 8 At1g53020 ubiquitin-conjugating enzyme family protein similar to ubiquitin-conjugating enzyme GB:3319990 from [Mus musculus]; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 8 1 5 9 At1g53170 ethylene-responsive element-binding factor 8 / ERF transcription factor 8 (ERF8) identical to ERF transcription factor 8 GI:10567108 from [Arabidopsis thaliana] 8 1 5 10 At1g53240 "malate dehydrogenase [NAD], mitochondrial identical to mitochondrial NAD-dependent malate dehydrogenase GI:3929649 SP|Q9ZP06 from [Arabidopsis thaliana]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 8 1 5 11 At1g53380 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 8 1 5 12 At1g53450 expressed protein 8 1 5 13 At1g56045 ribosomal protein L41 family protein contains Pfam doamin PF05162: Ribosomal protein L41 8 1 5 14 At1g56090 "tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain; similar to infertility-related sperm protein [Homo sapiens] GI:10863768, TPR-containing protein involved in spermatogenesis TPIS [Mus musculus] GI:6272680" 8 1 5 15 At1g56250 SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 8 1 5 16 At1g56290 "CwfJ-like family protein contains Pfam profiles PF04677: Protein similar to CwfJ N terminus 1, PF04676: Protein similar to CwfJ N terminus 2" 8 1 5 17 At1g56500 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P95649 CbbY protein {Rhodobacter sphaeroides}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 8 1 5 18 At1g56555 hypothetical protein 8 1 5 19 At1g57540 expressed protein contains similarity to T-box domain GI:5931592 from (Cynops pyrrhogaster) 8 1 5 20 At1g57580 F-box family protein contains Pfam:PF00646 F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 8 1 5 21 At1g61450 expressed protein contains similarity to myosin II GI:1763303 from [Schizosaccharomyces pombe]; expression supported by MPSS 8 1 5 22 At1g61520 chlorophyll A-B binding protein / LHCI type III (LHCA3.1) nearly identical to PSI type III chlorophyll a/b-binding protein GI:430947; contains Pfam profile: PF00504 chlorophyll A-B binding protein; similar to PSI type III chlorophyll a/b-binding protein GI:430947 from [Arabidopsis thaliana] 8 1 5 23 At1g61680 "terpene synthase/cyclase family protein similar to 1,8-cineole synthase [GI:3309117][Salvia officinalis]; contains Pfam profile: PF01397 terpene synthase family" 8 1 5 24 At1g61740 "expressed protein contains Pfam profile: PF01925 domain of unknown function DUF81; identical to cDNA hypothetical protein, partial GI:4079631" 8 1 5 25 At1g61900 expressed protein contains similarity to glutamic acid/alanine-rich protein GI:6707830 from [Trypanosoma congolense] 8 1 6 1 At1g61970 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 8 1 6 2 At1g62170 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 GI:9937311 from [Cucurbita maxima]; contains Pfam profile PF00079: Serpin (serine protease inhibitor) 8 1 6 3 At1g62225 expressed protein 8 1 6 4 At1g64930 "cytochrome P450, putative similar to cytochrome P450 CYP89 (SP:Q42602)[Arabidopsis thaliana]; similar to cytochrome p450 GI:438242 from [Solanum melongena]" 8 1 6 5 At1g64990 expressed protein contains similarity to putative G-protein coupled receptor GI:6649579 from [Homo sapiens] 8 1 6 6 At1g65130 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 8 1 6 7 At1g65170 ubiquitin carboxyl-terminal hydrolase family protein contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 8 1 6 8 At1g65320 CBS domain-containing protein contains Pfam profile PF00571: CBS domain 8 1 6 9 At1g65370 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 8 1 6 10 At1g65550 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 8 1 6 11 At1g65620 LOB domain protein 6 / lateral organ boundaries domain protein 6 (LBD6) / asymmetric leaves2 (AS2) identical to SP|O04479 LOB domain protein 6 (ASYMMETRIC LEAVES2) {Arabidopsis thaliana} 8 1 6 12 At1g68360 zinc finger protein-related similar to zinc finger protein GI:790683 from [Arabidopsis thaliana] 8 1 6 13 At1g68420 asparaginyl-tRNA synthetase-related similar to asparaginyl-tRNA synthetase SP:Q9SW96 from [Arabidopsis thaliana] 8 1 6 14 At1g68580 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain and PF05641: Agenet domain 8 1 6 15 At1g68610 "hypothetical protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 8 1 6 16 At1g68790 expressed protein 8 1 6 17 At1g68840 "DNA-binding protein RAV2 (RAV2) / AP2 domain-containing protein RAP2.8 identical to RAV2 GI:3868859 from [Arabidopsis thaliana], AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile: PF00847 AP2-domain" 8 1 6 18 At1g68990 "DNA-directed RNA polymerase, mitochondrial (RPOMT) identical to SP|P92969 DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6) {Arabidopsis thaliana}" 8 1 6 19 At1g69060 expressed protein 8 1 6 20 At1g71810 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 8 1 6 21 At1g71860 protein tyrosine phosphatase 1 (PTP1) identical to protein tyrosine phosphatase 1 GI:3170531 from [Arabidopsis thaliana]; contains Pfam profile: PF00102 protein-tyrosine phosphatase 8 1 6 22 At1g72020 expressed protein 8 1 6 23 At1g72060 expressed protein 8 1 6 24 At1g72220 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger); similar to GI:4928397 from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4), 579-590 (1999))" 8 1 6 25 At1g72280 "endoplasmic reticulum oxidoreductin 1 (ERO1) family protein contains Pfam domain, PF04137: Endoplasmic Reticulum Oxidoreductin 1 (ERO1)" 8 1 7 1 At1g72470 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 8 1 7 2 At1g72530 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor (required for chloroplast differentiation) GB:Q38732 [Antirrhinum majus]" 8 1 7 3 AT5G57480 PC-1 A05 8 1 7 4 3XSSC PC-1 A17 8 1 7 5 AT1G29930 PC-1 E05 8 1 7 6 3XSSC PC-1 E17 8 1 7 7 AT3G44150 PC-1 I05 8 1 7 8 3XSSC PC-1 I17 8 1 7 9 AT4G00810 PC-1 M05 8 1 7 10 3XSSC PC-1 M17 8 1 7 11 At1g75290 "isoflavone reductase, putative similar to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: Isoflavone reductase" 8 1 7 12 At1g75360 hypothetical protein 8 1 7 13 At1g75530 forkhead-associated domain-containing protein / FHA domain-containing protein 8 1 7 14 At1g75600 "histone H3.2, putative strong similarity to histone H3.2 SP|P11105 GI:417103 from Lolium temulentum, histone H3.2 from Mus pahari GI:515005; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 8 1 7 15 At1g75800 pathogenesis-related thaumatin family protein similar to receptor serine/threonine kinase PR5K [Arabidopsis thaliana] GI:1235680; contains Pfam profile: PF00314 Thaumatin family 8 1 7 16 At1g75860 expressed protein 8 1 7 17 At1g76040 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]" 8 1 7 18 At1g76070 expressed protein 8 1 7 19 At1g78730 F-box family protein contains F-box domain Pfam:PF00646 8 1 7 20 At1g78780 pathogenesis-related family protein contains similarity to pathogen-related protein (GI:499073) (Swiss-Prot:P16273) [Hordeum vulgare] 8 1 7 21 At1g78900 vacuolar ATP synthase catalytic subunit A / V-ATPase A subunit / vacuolar proton pump alpha subunit / V-ATPase 69 kDa subunit identical to SP|O23654 Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) {Arabidopsis thaliana} 8 1 7 22 At1g78950 "beta-amyrin synthase, putative similar to beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and GI:8918271 from [Pisum sativum]" 8 1 7 23 At1g79110 expressed protein 8 1 7 24 At1g79160 expressed protein 8 1 7 25 At1g79370 cytochrome P450 family protein similar to cytochrome P450 GI:984542 [Sorghum bicolor]; similar to cytochrome P450 GI:6739530 [Manihot esculenta] 8 1 8 1 At1g79430 myb family transcription factor-related 8 1 8 2 At2g01970 "endomembrane protein 70, putative " 8 1 8 3 At2g02030 F-box family protein contains F-box domain Pfam:PF00646 8 1 8 4 At2g02250 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 8 1 8 5 At2g02340 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 8 1 8 6 At2g02515 expressed protein 8 1 8 7 At2g02570 expressed protein 8 1 8 8 At2g02750 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 8 9 At2g02800 protein kinase (APK2b) identical to protein kinase APK2b [Arabidopsis thaliana] gi|2852449|dbj|BAA24695 8 1 8 10 At2g06050 "12-oxophytodienoate reductase (OPR3) / delayed dehiscence1 (DDE1) nearly identical to DELAYED DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314]; contains Pfam profile PF00724:oxidoreductase, FAD/FMN-binding; identical to cDNA OPDA-reductase homolog GI:5059114" 8 1 8 11 At2g06200 expressed protein 8 1 8 12 At2g06700 hypothetical protein 8 1 8 13 At2g06860 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 8 1 8 14 At2g07180 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 8 1 8 15 At2g07290 hypothetical protein 8 1 8 16 At2g07749 hypothetical protein contains Pfam profile PF05919: Mitovirus RNA-dependent RNA polymerase 8 1 8 17 At2g07674 expressed protein 8 1 8 18 At2g15170 plant basic secretory protein (BSP) family protein similar to NtPRp27 [Nicotiana tabacum] GI:5360263; contains Pfam profile PF04450: Plant Basic Secretory Protein 8 1 8 19 At2g15260 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 8 1 8 20 At2g15390 "xyloglucan fucosyltransferase, putative (FUT4) identical to SP|Q9SJP2 Probable fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 8 1 8 21 At2g15460 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 8 1 8 22 At2g15620 "ferredoxin--nitrite reductase, putative strong similarity to ferredoxin--nitrite reductase [Nicotiana tabacum] GI:19893; contains Pfam profiles PF03460: Nitrite/Sulfite reductase ferredoxin-like half domain, PF01077: Nitrite and sulphite reductase 4Fe-4S domain" 8 1 8 23 At2g15690 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 8 24 At2g15910 CSL zinc finger domain-containing protein contains Pfam PF05207: CSL zinc finger domain 8 1 8 25 At2g16010 hypothetical protein 8 1 9 1 At2g18870 hypothetical protein contains 1 transmembrane domain; tandem duplication of fibronectin type III domain protein (GI:3004551) (TIGR_Ath1:At2g18880) [Arabidopsis thaliana] 8 1 9 2 At2g18900 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); related to LACK protective antigen (GI:13625467) [Leishmania donovani] 8 1 9 3 At2g19060 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL6 GI:15054390, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 8 1 9 4 At2g19130 "S-locus lectin protein kinase family protein contains Pfam domains PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding)" 8 1 9 5 At2g19330 "leucine-rich repeat family protein contains leucine rich repeats, Pfam:PF00560" 8 1 9 6 At2g19400 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 8 1 9 7 At2g19580 senescence-associated protein-related similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855; contains a transmembrane 4 family signature; rare (GC) splice donor consensus found instead of (GT) at intron 2. 8 1 9 8 At2g19620 Ndr family protein similar to SP|O23969 Pollen specific protein SF21 {Helianthus annuus}; contains Pfam profile PF03096: Ndr family 8 1 9 9 At2g22270 expressed protein 8 1 9 10 At2g22340 hypothetical protein 8 1 9 11 At2g22520 hypothetical protein and grail 8 1 9 12 At2g22600 KH domain-containing protein 8 1 9 13 At2g22780 "malate dehydrogenase, glyoxysomal, putative strong similarity to glyoxysomal malate dehydrogenase (EC 1.1.1.37) SP|P19446 {Citrullus lanatus}, SP|P46488 {Cucumis sativus}, [Medicago sativa] GI:2827078, SP|Q42972 {Oryza sativa}, SP|Q9ZP05 {Arabidopsis thaliana}, SP|P37228 {Glycine max}; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 8 1 9 14 At2g22830 "squalene monooxygenase, putative / squalene epoxidase, putative similar to SP|O65404 (SE 1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)" 8 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 8 1 9 16 At2g23010 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 8 1 9 17 At2g25850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain; identical to cDNA GI:31747890" 8 1 9 18 At2g25920 expressed protein 8 1 9 19 At2g26100 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 1 9 20 At2g26150 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 8 1 9 21 At2g26340 expressed protein 8 1 9 22 At2g26400 "acireductone dioxygenase (ARD/ARD') family protein similar to iron-deficiency induced gene [Hordeum vulgare] GI:14522834, SIPL [Homo sapiens] GI:16551383; contains Pfam profile PF03079: ARD/ARD' family" 8 1 9 23 At2g26560 "patatin, putative similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734" 8 1 9 24 At2g26600 glycosyl hydrolase family 17 protein 8 1 9 25 At2g29260 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 8 1 10 1 At2g29340 short-chain dehydrogenase/reductase (SDR) family protein similar to tropinone reductase-I GI:424160 from [Datura stramonium] 8 1 10 2 At2g29490 "glutathione S-transferase, putative similar to glutathione S-transferase 103-1A [Arabidopsis thaliana] SWISS-PROT:P46421" 8 1 10 3 At2g29530 "mitochondrial import inner membrane translocase (TIM10) identical to mitochondrial import inner membrane translocase subunit Tim10 [Arabidopsis thaliana] Swiss-Prot:Q9ZW33; contains Pfam domain, PF02953: Tim10/DDP family zinc finger" 8 1 10 4 At2g29680 "cell division control protein CDC6, putative almost identical to DNA replication protein CDC6 GI:18056480 from [Arabidopsis thaliana]; identical to cDNA CDC6 protein (2g29680 gene) GI:18056479" 8 1 10 5 At2g29730 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 1 10 6 At2g29910 F-box family protein contains F-box domain Pfam:PF00646 8 1 10 7 At2g29940 ABC transporter family protein similar to ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia] 8 1 10 8 At2g32590 barren family protein low similarity to SP|Q9Y7R3 Condensin complex subunit 2 (p105) {Schizosaccharomyces pombe}; contains Pfam profile PF05786: Barren protein 8 1 10 9 At2g32640 expressed protein 8 1 10 10 At2g32770 purple acid phosphatase (PAP13) identical to purple acid phosphatase (PAP13) [Arabidopsis thaliana] GI:20257489; contains Pfam profile PF00149: Ser/Thr protein phosphatase 8 1 10 11 At2g32820 hypothetical protein and genscan 8 1 10 12 At2g32970 expressed protein 8 1 10 13 At2g33030 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 8 1 10 14 At2g33210 "chaperonin, putative similar to SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial precursor (HSP60-2) [Cucurbita maxima]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 8 1 10 15 At2g33260 tryptophan/tyrosine permease family protein contains Pfam profile PF03222: Tryptophan/tyrosine permease family 8 1 10 16 At2g35810 expressed protein 8 1 10 17 At2g35870 expressed protein 8 1 10 18 At2g36020 "abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 8 1 10 19 At2g36060 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 8 1 10 20 At2g36240 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 10 21 At2g36295 expressed protein 8 1 10 22 At2g36430 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 8 1 10 23 At2g36485 expressed protein 8 1 10 24 At2g39080 expressed protein 8 1 10 25 At2g39140 pseudouridine synthase family protein 8 1 11 1 At2g39310 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 8 1 11 2 At2g39370 expressed protein 8 1 11 3 At2g39520 hypothetical protein 8 1 11 4 At2g39580 expressed protein 8 1 11 5 At2g39730 "ribulose bisphosphate carboxylase/oxygenase activase / RuBisCO activase identical to SWISS-PROT:P10896 ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA)[Arabidopsis thaliana]" 8 1 11 6 At2g39760 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 8 1 11 7 At2g42240 "RNA recognition motif (RRM)-containing protein similar to RNA-binding protein (Hermes) from {Gallus gallus} SP|Q9W6I1, {Xenopus laevis} SP|Q9YGP5, {Mus musculus} SP|Q9WVB0; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 1 11 8 At2g42280 basic helix-loop-helix (bHLH) family protein 8 1 11 9 At2g42440 LOB domain protein 17 / lateral organ boundaries domain protein 17 (LBD17) nearly identical to SP|Q9SLB6 LOB domain protein 17 {Arabidopsis thaliana}; identical to ASYMMETRIC LEAVES2-like protein 15 [Arabidopsis thaliana] GI:19919001 8 1 11 10 At2g42500 serine/threonine protein phosphatase PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100 Serine/threonine protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 8 1 11 11 At2g42620 F-box family protein (ORE9) E3 ubiquitin ligase SCF complex F-box subunit; identical to F-box containing protein ORE9 GI:15420162 from [Arabidopsis thaliana] 8 1 11 12 At2g42680 "ethylene-responsive transcriptional coactivator, putative similar to ethylene-responsive transcriptional coactivator [Lycopersicon esculentum] gi|5669634|gb|AAD46402" 8 1 11 13 At2g42850 cytochrome P450 family protein similar to taxane 13-alpha-hydroxylase (GI:17148242) {Taxus cuspidata} 8 1 11 14 At2g42900 expressed protein 8 1 11 15 At2g45580 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome p450 8 1 11 16 At2g45630 "oxidoreductase family protein low similarity to SP|P36234 Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) {Hyphomicrobium methylovorum}; contains Pfam profile PF00389: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain" 8 1 11 17 At2g45780 expressed protein 8 1 11 18 At2g45840 expressed protein 8 1 11 19 At2g46020 "transcription regulatory protein SNF2, putative similar to SP|P22082 Transcription regulatory protein SNF2 (SWI/SNF complex component SNF2) {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 8 1 11 20 At2g46060 transmembrane protein-related contains weak similarity to Swiss-Prot:Q9HCN3 transmembrane protein 8 precursor (M83 protein) [Homo sapiens] 8 1 11 21 At2g46220 expressed protein 8 1 11 22 At2g46270 G-box binding factor 3 (GBF3) identical to G-box binding factor 3 (GBF3) SP:P42776 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 8 1 11 23 At3g01590 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044 Pfam profile PF01263: Aldose 1-epimerase 8 1 11 24 At3g01640 "GHMP kinase family protein contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288" 8 1 11 25 At3g01810 expressed protein 8 1 12 1 At3g01850 "ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family; contains non-consensus splice sites at exon 1 and exon2" 8 1 12 2 At3g01980 "short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profiles: PF00106 short chain dehydrogenase, PF00678 short chain dehydrogenase/reductase C-terminus" 8 1 12 3 At3g02040 glycerophosphoryl diester phosphodiesterase family protein contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 8 1 12 4 At3g02180 expressed protein 8 1 12 5 At3g02210 "phytochelatin synthetase family protein / COBRA cell expansion protein COBL3 similar to phytochelatin synthetase [Hordeum vulgare subsp. vulgare] GI:29570314; identified in Roudier, et al, Plant Phys. (2002) 130:538-548 (PMID:12376623); supported by cDNA: gi|26452134|dbj|AK118555.1; contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region" 8 1 12 6 At3g04830 expressed protein 8 1 12 7 At3g04890 expressed protein 8 1 12 8 At3g05060 "SAR DNA-binding protein, putative strong similarity to SAR DNA-binding protein-1 [Pisum sativum] GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain" 8 1 12 9 At3g05110 hypothetical protein 8 1 12 10 At3g05270 expressed protein similar to endosome-associated protein (EEA1) (GI:1016368) [Homo sapiens]; similar to smooth muscle myosin heavy chain (GI:4417214) [Homo sapiens; contains Pfam profile PF05911: Plant protein of unknown function (DUF869) 8 1 12 11 At3g05330 "cyclin family low similarity to microtubule-binding protein TANGLED1 [Zea mays] GI:11228986; contains Pfam profile PF00134: Cyclin, N-terminal domain" 8 1 12 12 At3g05510 phospholipid/glycerol acyltransferase family protein similar to SP|Q16635 Tafazzin from Homo sapiens; contains Pfam profile: PF01553 Acyltransferase 8 1 12 13 At3g05545 "transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein similar to VIP2 protein [Avena fatua] gi|6996144|emb|CAB75506; contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 8 1 12 14 At3g07980 "protein kinase, putative similar to MAP3K epsilon protein kinase [Arabidopsis thaliana] gi|3549652|emb|CAA12272" 8 1 12 15 At3g08030 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 8 1 12 16 At3g08620 KH domain-containing protein 8 1 12 17 At3g08680 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profile: PF00069 Eukaryotic protein kinase domain, PF00560 leucine Rich Repeat (5 copies)" 8 1 12 18 At3g08860 "alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative similar to similar to SP|Q64565 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate aminotransferase) {Rattus norvegicus}; contains Pfam profile PF00202: aminotransferase, class III" 8 1 12 19 At3g08910 "DNAJ heat shock protein, putative similar to SP|P25685 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Homo sapiens}; contains Pfam profile PF00226: DnaJ domain" 8 1 12 20 At3g09032 expressed protein 8 1 12 21 At3g09080 transducin family protein / WD-40 repeat family protein contains 8 WD-40 repeats; similar to JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus] 8 1 12 22 At3g11560 expressed protein 8 1 12 23 At3g11600 expressed protein weak similarity to B-type cyclin (GI:849074) [Nicotiana tabacum] 8 1 12 24 At3g11760 expressed protein 8 1 12 25 At3g11820 "syntaxin 121 (SYP121) / syntaxin-related protein (SYR1) contains Pfam profiles: PF00804 syntaxin and PF05739: SNARE domain; identical to cDNA syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788, SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 8 1 13 1 At3g11940 40S ribosomal protein S5 (RPS5B) similar to 40S ribosomal protein S5 GB:AAC98068 GI:4056502 from [Arabidopsis thaliana] 8 1 13 2 At3g11964 S1 RNA-binding domain-containing protein similar to SP|Q05022 rRNA biogenesis protein RRP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00575: S1 RNA binding domain 8 1 13 3 At3g12120 "omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) / delta-12 desaturase identical to omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) SP:P46313 [Arabidopsis thaliana (Mouse-ear cress)] (Plant Cell 6:147-158(1994))" 8 1 13 4 At3g12170 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI7 DnaJ homolog subfamily B member 8 [Mus musculus]; contains Pfam profile: PF00226 DnaJ domain 8 1 13 5 At3g14590 C2 domain-containing protein low similarity to SP|Q16974 Calcium-dependent protein kinase C (EC 2.7.1.-) {Aplysia californica}; contains Pfam profile PF00168: C2 domain 8 1 13 6 At3g14640 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 8 1 13 7 At3g14820 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 GI:15054386 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 8 1 13 8 At3g14850 expressed protein 8 1 13 9 At3g14980 "PHD finger transcription factor, putative contains Pfam profile: PF00628 PHD-finger" 8 1 13 10 At3g15020 "malate dehydrogenase [NAD], mitochondrial, putative similar to mitochondrial NAD-dependent malate dehydrogenase GB:CAA10320 SP|Q9ZP06 [Arabidopsis thaliana]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 8 1 13 11 At3g15170 cup-shaped cotyledon1 protein / CUC1 protein (CUC1) identical to CUP-SHAPED COTYLEDON1 (CUC1) (GI:12060422) [Arabidopsis thaliana] 8 1 13 12 At3g15230 hypothetical protein 8 1 13 13 At3g17800 expressed protein 8 1 13 14 At3g17860 expressed protein 8 1 13 15 At3g18050 expressed protein 8 1 13 16 At3g18110 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 8 1 13 17 At3g18250 expressed protein ; expression supported by MPSS 8 1 13 18 At3g18300 expressed protein ; expression supported by MPSS 8 1 13 19 At3g18460 "hypothetical protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 8 1 13 20 At3g18510 expressed protein 8 1 13 21 At3g21200 expressed protein 8 1 13 22 At3g21250 ABC transporter family protein similar to MRP-like ABC transporter GB:AAC49791 from [Arabidopsis thaliana] 8 1 13 23 At3g21420 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|Q9ZWQ9 Flavonol synthase (EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 8 1 13 24 At3g21480 transcription activation domain-interacting protein-related contains weak similarity to Pax transcription activation domain interacting protein PTIP (GI:4336734) [Mus musculus] 8 1 13 25 At3g21620 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 8 1 14 1 At3g21680 expressed protein 8 1 14 2 At3g21810 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 8 1 14 3 At3g21865 expressed protein 8 1 14 4 At3g24570 "peroxisomal membrane 22 kDa family protein contains Mpv17 / PMP22 family domain, Pfam:PF04117" 8 1 14 5 At3g24630 hypothetical protein 8 1 14 6 At3g24800 "PRT1 protein (PRT1) E3, N-end rule ubiquitin ligase, contains two RING finger domain; identical to PRT1 [Arabidopsis thaliana] GI:3319884" 8 1 14 7 At3g24860 "hydroxyproline-rich glycoprotein family protein contains proline-rich domains, INTERPRO:IPR000694" 8 1 14 8 At3g25120 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 8 1 14 9 At3g25170 rapid alkalinization factor (RALF) family protein 8 1 14 10 At3g25430 "CAF1 family ribonuclease contains Pfam domain, PF04857: CAF1 family ribonuclease" 8 1 14 11 At3g25500 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 8 1 14 12 At3g28110 hypothetical protein 8 1 14 13 At3g28150 expressed protein 8 1 14 14 At3g28340 "galactinol synthase, putative " 8 1 14 15 At3g28390 "P-glycoprotein, putative similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare]" 8 1 14 16 At3g28570 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 8 1 14 17 At3g28630 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 8 1 14 18 At3g28810 hypothetical protein 8 1 14 19 At3g28860 "multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein GI:3849833 from [Arabidopsis thaliana]; contains Pfam profiles PF00005: ABC transporter and PF00664: ABC transporter transmembrane region; identical to cDNA MDR-like p-glycoprotein (At3g28860) GI:24324261" 8 1 14 20 At3g42630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 14 21 At3g42700 hypothetical protein 8 1 14 22 At3g42870 hypothetical protein 8 1 14 23 At3g42960 alcohol dehydrogenase (ATA1) identical to alcohol dehydrogenase (ATA1) GI:2501781 from [Arabidopsis thaliana] 8 1 14 24 At3g43250 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] 8 1 14 25 At3g43320 hypothetical protein 8 1 15 1 At3g43520 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 8 1 15 2 At3g43550 "GDSL-motif lipase, putative similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 8 1 15 3 At3g46520 actin 12 (ACT12) identical to SP|P53497 Actin 12 {Arabidopsis thaliana} 8 1 15 4 At3g46580 methyl-CpG-binding domain-containing protein weak similarity to SP|P51608 Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2) {Homo sapiens}; contains Pfam profile PF01429: Methyl-CpG binding domain 8 1 15 5 At3g46760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 1 15 6 At3g46820 "serine/threonine protein phosphatase PP1 isozyme 5 (TOPP5) / phosphoprotein phosphatase 1 identical to SP|P48485 Serine/threonine protein phosphatase PP1 isozyme 5 (EC 3.1.3.16) {Arabidopsis thaliana}, phosphoprotein phosphatase 1 GI:166803 {Arabidopsis thaliana}" 8 1 15 7 At3g47000 "glycosyl hydrolase family 3 protein beta-D-glucan exohydrolase, Nicotiana tabacum, TREMBL:AB017502_1" 8 1 15 8 At3g47060 "FtsH protease, putative contains similarity to FtsH protease GI:13183728 from [Medicago sativa]" 8 1 15 9 At3g47240 hypothetical protein 8 1 15 10 At3g47290 "phosphoinositide-specific phospholipase C family protein similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] GI:1771381, 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] GI:2765140; contains Pfam profiles PF00168: C2 domain, PF00388: Phosphatidylinositol-specific phospholipase C, X domain" 8 1 15 11 At3g50070 "cyclin family protein similar to cyclin D3.1 protein [Nicotiana tabacum] GI:4160300, CycD3;2 [Lycopersicon esculentum] GI:6434199; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 8 1 15 12 At3g50130 expressed protein ; expression supported by MPSS 8 1 15 13 At3g50300 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 8 1 15 14 At3g50360 caltractin / centrin identical to caltractin; centrin GI:3688162 from [Arabidopsis thaliana] 8 1 15 15 At3g50530 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820" 8 1 15 16 At3g50570 "hydroxyproline-rich glycoprotein family protein contains proline-rich protein domains, INTERPRO:IPR000694" 8 1 15 17 At3g50750 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 8 1 15 18 At3g50810 "integral membrane protein, putative contains 4 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 8 1 15 19 At3g53420 plasma membrane intrinsic protein 2A (PIP2A) / aquaporin PIP2.1 (PIP2.1) identical to plasma membrane intrinsic protein 2A SP: P43286 from [Arabidopsis thaliana] 8 1 15 20 At3g53460 "29 kDa ribonucleoprotein, chloroplast / RNA-binding protein cp 29 nearly identical to SP|Q43349 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29) {Arabidopsis thaliana}" 8 1 15 21 At3g53590 "leucine-rich repeat transmembrane protein kinase, putative CLV1 receptor kinase, Arabidopsis thaliana, EMBL:ATU96879" 8 1 15 22 At3g53630 "expressed protein predicted proteins, Arabidopsis thaliana" 8 1 15 23 At3g53780 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 8 1 15 24 At3g53840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 1 15 25 At3g53980 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 8 1 16 1 At3g54000 expressed protein 8 1 16 2 At3g56780 F-box family protein contains F-box domain Pfam:PF00646 8 1 16 3 At3g56840 FAD-dependent oxidoreductase family protein contains Pfam profile PF01266 FAD dependent oxidoreductase 8 1 16 4 At3g57010 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324] 8 1 16 5 At3g57070 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 8 1 16 6 At3g57250 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 8 1 16 7 At3g57310 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 8 1 16 8 At3g57450 expressed protein 8 1 16 9 At3g57510 endo-polygalacturonase (ADPG1) identical to endo-polygalacturonase [Arabidopsis thaliana] GI:2597824 8 1 16 10 At3g60270 "uclacyanin, putative similar to uclacyanin 3 GI:3395770 from [Arabidopsis thaliana]; contains Pfam profile PF02298: Plastocyanin-like domain" 8 1 16 11 At3g60330 "ATPase, plasma membrane-type, putative / proton pump, putative similar to P-type H(+)-transporting ATPase from Nicotiana plumbaginifolia [SP|Q08435, SP|Q08436], Lycopersicon esculentum [GI:5901757, SP|P22180], Solanum tuberosum [GI:435003]; contains InterPro accession IPR001757: ATPase, E1-E2 type" 8 1 16 12 At3g60490 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana]" 8 1 16 13 At3g60540 sec61beta family protein similar to SP|P52870 Protein transport protein SEC61 beta 1 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF03911: Sec61beta family 8 1 16 14 At3g60710 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 8 1 16 15 At3g60770 "40S ribosomal protein S13 (RPS13A) AtRPS13A mRNA for cytoplasmic ribosomal protein S13, Arabidopsis thaliana,AB031739" 8 1 16 16 At3g60930 expressed protein 8 1 16 17 At3g60990 expressed protein 8 1 16 18 At4g00140 expressed protein 8 1 16 19 At4g00190 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 8 1 16 20 At4g00315 F-box family protein contains F-box domain Pfam:PF00646 8 1 16 21 At4g00340 "S-locus glycoprotein family protein / curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein contains Pfam profiles: PF01453 lectin (probable mannose binding), PF00954 S-locus glycoprotein family, PF00024 PAN domain" 8 1 16 22 At4g00450 expressed protein 8 1 16 23 At4g00520 acyl-CoA thioesterase family protein contains Pfam profile: PF02551 acyl-CoA thioesterase 8 1 16 24 At4g00630 "K+ efflux antiporter, putative (KEA2) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; similar to SWISS-PROT:SPP03819 Glutathione-regulated potassium-efflux system protein kefC (K(+)/H(+) antiporter) [Escherichia coli]" 8 1 16 25 At4g00670 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 8 1 17 1 At4g03160 hypothetical protein 8 1 17 2 At4g03200 "expressed protein contains Pfam PF03190: Protein of unknown function, DUF255" 8 1 17 3 At4g03330 "syntaxin, putative (SYP123) similar to SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 8 1 17 4 At4g03390 "leucine-rich repeat transmembrane protein kinase, putative similar to Z. mays leucine-rich repeat transmembrane protein kinase LRRTPK 1, GenBank accession number AF023164" 8 1 17 5 At4g03520 "thioredoxin M-type 2, chloroplast (TRX-M2) nearly identical to SP|Q9SEU8 Thioredoxin M-type 2, chloroplast precursor (TRX-M2) {Arabidopsis thaliana}" 8 1 17 6 At4g03580 hypothetical protein 8 1 17 7 At4g03940 expressed protein 8 1 17 8 At4g03977 hypothetical protein 8 1 17 9 At4g08740 hypothetical protein 8 1 17 10 At4g08800 "protein kinase, putative similar to dual specificity kinase 1 gi|1216484|gb|AAB47968; contains protein kinase domain, Pfam:PF00069" 8 1 17 11 At4g08940 expressed protein 8 1 17 12 At4g09010 "L-ascorbate peroxidase, chloroplast, putative identical to SP|P82281|TL29_ARATH (EC 1.11.1.11) {Arabidopsis thaliana}; ascorbate peroxidase - Spinacia oleracea, (gi:1669585); contains Pfam domain PF00141: Peroxidase; contains TIGRfam domain TIGR01409: Tat (twin-arginine translocation) pathway signal sequence; identical to ascorbate peroxidase APX4 (AT4g09010) mRNA, partial cds GI:31980499" 8 1 17 13 At4g09200 SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 8 1 17 14 At4g09290 hypothetical protein 8 1 17 15 At4g09500 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 1 17 16 At4g09530 auxin-responsive family protein similar to auxin-induced protein TGSAUR12 (GI:10185816) [Tulipa gesneriana]; auxin-induced protein SAUR-AC1 (PIR2:T06084) [Arabidopsis thaliana] 8 1 17 17 At4g12300 "cytochrome P450 family protein flavonoid 3',5'-hydroxylase - Campanula medium, PID:d1003951" 8 1 17 18 At4g12360 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 8 1 17 19 At4g12520 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 14 kDa polypeptide [Catharanthus roseus] GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 8 1 17 20 At4g12570 "ubiquitin-protein ligase, putative similar to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-) {Saccharomyces cerevisiae}; contains Pfam profiles PF00240: Ubiquitin family, PF00632: HECT-domain (ubiquitin-transferase)" 8 1 17 21 At4g12750 expressed protein 8 1 17 22 At4g12800 "photosystem I reaction center subunit XI, chloroplast (PSI-L) / PSI subunit V identical to Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) (Swiss-Prot:Q9SUI4) [Arabidopsis thaliana]; contains Pfam profile PF02605: photosystem I reaction center subunit XI; contains 2 transmembrane domains" 8 1 17 23 At4g12980 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana]" 8 1 17 24 At4g13040 AP2 domain-containing transcription factor family protein contains Pfam profile PF00847: AP2 domain 8 1 17 25 At4g15415 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B' (B'gamma) identical to B' regulatory subunit of PP2A [Arabidopsis thaliana] GI:2160694; similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 8 1 18 1 At4g15460 glycine-rich protein 8 1 18 2 At4g15620 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 8 1 18 3 At4g15680 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 8 1 18 4 At4g15810 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 8 1 18 5 At4g15880 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; low similarity to sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; identical to cDNA hypothetical protein, partial (1189 bp) GI:2326349" 8 1 18 6 At4g16040 hypothetical protein 8 1 18 7 At4g16090 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 8 1 18 8 At4g18540 expressed protein ; expression supported by MPSS 8 1 18 9 At4g18590 expressed protein 8 1 18 10 At4g18740 expressed protein 8 1 18 11 At4g18790 "NRAMP metal ion transporter 5, putative (NRAMP5) identical to heavy metal transporter [Arabidopsis thaliana]gi|12657269|emb|CAC27822; similar to metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 8 1 18 12 At4g18960 "floral homeotic protein AGAMOUS (AG) contains an ACG start codon (Riechmann, Ito, and Meyerowitz, Mol Cell Biol, 1999); supported by cDNA gi|16155|emb|X53579" 8 1 18 13 At4g19003 expressed protein contains Pfam PF05871: Eukaryotic protein of unknown function (DUF852) 8 1 18 14 At4g19120 early-responsive to dehydration stress protein (ERD3) identical to ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase; identical to cDNA ERD3 GI:15320409 8 1 18 15 At4g19170 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris][GI:6715257]; neoxanthin cleavage enzyme, Lycopersicon esculentum, PATX:E325797" 8 1 18 16 At4g22000 expressed protein 8 1 18 17 At4g22080 pectate lyase family protein similar to pectate lyase 2 GP:6606534 from [Musa acuminata] 8 1 18 18 At4g22214 expressed protein 8 1 18 19 At4g22235 expressed protein 8 1 18 20 At4g22370 hypothetical protein 8 1 18 21 At4g22430 hypothetical protein 8 1 18 22 At4g22620 "auxin-responsive family protein auxin-induced protein 10A, Glycine max., PIR2:JQ1099" 8 1 18 23 At4g22680 myb family transcription factor (MYB85) similar to myb DNA-binding protein GI:1020155 from [Arabidopsis thaliana] 8 1 18 24 At4g25240 "multi-copper oxidase type I family protein pollen-specific protein precursor -Nicotiana tabacum, PID:g19902; contains Pfam profile: PF00394 Multicopper oxidase" 8 1 18 25 At4g25300 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Petunia x hybrida][GI:311658], anthocyanidin synthase [Torenia fournieri][GI:12583673]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 8 1 19 1 At4g25433 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 8 1 19 2 At4g25490 "DRE-binding protein (DREB1B) / CRT/CRE-binding factor 1 (CBF1) / transcriptional activator CBF1 identical to DREB1B GI:3738225 from [Arabidopsis thaliana], DREB1B [Arabidopsis thaliana] GI:3660550, transcriptional activator CBF1 [Arabidopsis thaliana] GI:1899058, CRT/CRE binding factor 1 [Arabidopsis thaliana] GI:4091982; supported by cDNA:gi_1899057_gb_U77378.1_ATU77378; identical to cDNA transcriptional activator CBF1 GI:1899057" 8 1 19 3 At4g25650 "Rieske [2Fe-2S] domain-containing protein similar to cell death suppressor protein lls1 from Zea mays [gi:1935909], Rieske iron-sulfur protein Tic55 from Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske [2Fe-2S] domain" 8 1 19 4 At4g25690 expressed protein 8 1 19 5 At4g25860 oxysterol-binding family protein contains Pfam profile PF01237: Oxysterol-binding protein 8 1 19 6 At4g25920 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 8 1 19 7 At4g28430 reticulon family protein contains Pfam profile PF02453: Reticulon 8 1 19 8 At4g28485 hypothetical protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 8 1 19 9 At4g28640 auxin-responsive protein / indoleacetic acid-induced protein 11 (IAA11) identical to SP|Q38829 Auxin-responsive protein IAA11 (Indoleacetic acid-induced protein 11) {Arabidopsis thaliana} 8 1 19 10 At4g28700 "ammonium transporter, putative similar to SP|O04161 Ammonium transporter 1, member 2 (LeAMT1;2) {Lycopersicon esculentum}; contains Pfam profile PF00909: Ammonium Transporter Family" 8 1 19 11 At4g28840 expressed protein 8 1 19 12 At4g28910 expressed protein 8 1 19 13 At4g29080 "auxin-responsive AUX/IAA family protein similar to SP|Q38826 Auxin-responsive protein IAA8, SP|Q38827 Auxin-responsive protein IAA9 from Arabidopsis thaliana; contains Pfam profile: PF02309: AUX/IAA family" 8 1 19 14 At4g29140 MATE efflux protein-related several hypothetical proteins - Arabidopsis thaliana; contains Pfam profile PF01554: Uncharacterized membrane protein family 8 1 19 15 At4g31710 "glutamate receptor family protein (GLR2.4) plant glutamate receptor family, PMID:11379626" 8 1 19 16 At4g31750 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase 2C, Medicago sativa, PID:g2582800" 8 1 19 17 At4g31875 expressed protein 8 1 19 18 At4g31920 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 8 1 19 19 At4g32060 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 8 1 19 20 At4g32110 expressed protein 8 1 19 21 At4g32290 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 8 1 19 22 At4g32350 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 8 1 19 23 AT5G57480 PC-1 A05 8 1 19 24 3XSSC PC-1 A17 8 1 19 25 AT1G29930 PC-1 E05 8 1 20 1 3XSSC PC-1 E17 8 1 20 2 AT3G44150 PC-1 I05 8 1 20 3 3XSSC PC-1 I17 8 1 20 4 AT4G00810 PC-1 M05 8 1 20 5 3XSSC PC-1 M17 8 1 20 6 At4g34890 "xanthine dehydrogenase, putative similar to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH [SP|P47990]; contains Pfam profile PF02738 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain" 8 1 20 7 At4g34950 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 8 1 20 8 At4g35110 expressed protein 8 1 20 9 At4g35160 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase, Pinus taeda, gb:U39301" 8 1 20 10 At4g35300 transporter-related low similarity to hexose transporter [Solanum tuberosum] GI:8347246; contains Pfam profile PF00083: major facilitator superfamily protein 8 1 20 11 At4g35350 "cysteine endopeptidase, papain-type (XCP1) identical to papain-type cysteine endopeptidase XCP1 GI:6708181 from [Arabidopsis thaliana]" 8 1 20 12 At4g35500 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 8 1 20 13 At4g35550 homeobox-leucine zipper protein (HB-2) / HD-ZIP protein HB2 homeodomain protein [Populus tremula x Populus tremuloides] GI:3955021; contains Pfam PF00046: Homeobox domain 8 1 20 14 At4g38220 "aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative similar to aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase, ACY-1)[Homo sapiens] SWISS-PROT:Q03154" 8 1 20 15 At4g38230 "calcium-dependent protein kinase, putative / CDPK, putative calmodulin-domain protein kinase CDPK isoform 6 [Arabidopsis thaliana] gi|1399275|gb|AAB03246; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 8 1 20 16 At4g38400 "expansin family protein (EXPL2) contains Pfam profile: PF01357 pollen allergen; expansin-like gene, PMID:11641069, www.bio.psu.edu/expansins" 8 1 20 17 At4g38470 protein kinase family protein similar to protein kinase [gi:170047] from Glycine max; contains Pfam protein kinase domain PF00069 8 1 20 18 At4g38630 "26S proteasome regulatory subunit S5A (RPN10) identical to multiubiquitin chain binding protein (MBP1) SP:P55034, GI:1165206" 8 1 20 19 At4g38690 1-phosphatidylinositol phosphodiesterase-related contains weak similarity to 1-phosphatidylinositol phosphodiesterase precursor (EC 4.6.1.13) (Phosphatidylinositol diacylglycerol-lyase) (Phosphatidylinositol- specific phospholipase C) (PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes] 8 1 20 20 At4g38870 F-box family protein contains Pfam profile: PF00646 F-box domain 8 1 20 21 At4g38910 expressed protein 8 1 20 22 At5g02320 myb family transcription factor (MYB3R5) contains Pfam profile: PF00249 myb-like DNA binding domain; identical to cDNA putative c-myb-like transcription factor MYB3R-5 (MYB3R5) GI:15375300 8 1 20 23 At5g02380 metallothionein protein 2B (MT-2B) identical to SWISS-PROT:Q38805 metallothionein-like protein 2B (MT-2B) [Arabidopsis thaliana] 8 1 20 24 At5g02530 "RNA and export factor-binding protein, putative BcDNA.LD24793, Drosophila melanogaster, EMBL:AF172637" 8 1 20 25 At5g02580 expressed protein 8 1 21 1 At5g02730 allergen V5/Tpx-1-related family protein low similarity to SP|Q05968 Pathogenesis-related protein 1 precursor {Hordeum vulgare}; contains Pfam profile PF00188: SCP-like extracellular protein 8 1 21 2 At5g02770 expressed protein 8 1 21 3 At5g02930 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 8 1 21 4 At5g02990 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 8 1 21 5 At5g05670 expressed protein 8 1 21 6 At5g05730 "anthranilate synthase, alpha subunit, component I-1 (ASA1) identical to SP|P32068" 8 1 21 7 At5g05890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 1 21 8 At5g05930 guanylyl cyclase-related (GC1) similar to guanylyl cyclase (GC1) GI:21436486 from [Arabidopsis thaliana]; identical to cDNA putative guanylate cyclase GI:21436486 8 1 21 9 At5g06090 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase 8 1 21 10 At5g06130 chaperone protein dnaJ-related similar to unknown protein (pir||T00468); contains Pfam PF00684 : DnaJ central domain (4 repeats) 8 1 21 11 At5g06265 hyaluronan mediated motility receptor-related contains weak similarity to hyaluronan mediated motility receptor (Intracellular hyaluronic acid binding protein) (Receptor for hyaluronan-mediated motility) (CD168 antigen) (Swiss-Prot:O75330) [Homo sapiens] 8 1 21 12 At5g06310 expressed protein similar to unknown protein (gb|AAD29059.1) 8 1 21 13 At5g09390 CD2-binding protein-related similar to CD2 cytoplasmic domain binding protein [Homo sapiens] GI:3983427 8 1 21 14 At5g09450 pentatricopeptide (PPR) repeat-containing protein low similiarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat 8 1 21 15 At5g09630 expressed protein 8 1 21 16 At5g09690 "magnesium transporter CorA-like family protein (MRS2-7) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 8 1 21 17 At5g09860 nuclear matrix protein-related low similarity to nuclear matrix protein p84 [Homo sapiens] GI:550058 8 1 21 18 At5g09900 "26S proteasome regulatory subunit, putative (RPN5) p55 protein-like" 8 1 21 19 At5g10050 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 8 1 21 20 At5g10090 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 8 1 21 21 At5g13230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 21 22 At5g13290 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 1 21 23 At5g13450 "ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative identical to SP|Q96251; similar to SP|P22778 ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) {Ipomoea batatas}; contains Pfam profile PF00213: ATP synthase F1, delta subunit" 8 1 21 24 At5g13500 "expressed protein predicted protein At2g25260 - Arabidopsis thaliana, EMBL:AC007070" 8 1 21 25 At5g13650 "elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2" 8 1 22 1 At5g13700 "polyamine oxidase, putative similar to SP|O64411 Polyamine oxidase precursor (EC 1.5.3.11) from Zea mays" 8 1 22 2 At5g13860 tumour susceptibility gene 101 (TSG101) family protein similar to SP|Q99816 Tumor susceptibility gene 101 protein {Homo sapiens}; contains Pfam profile PF05743: Tumour susceptibility gene 101 protein (TSG101) 8 1 22 3 At5g13920 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 8 1 22 4 At5g16680 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 8 1 22 5 At5g16730 "expressed protein weak similarity to microtubule binding protein D-CLIP-190 [Drosophila melanogaster] GI:2773363, SMC2-like condensin [Arabidopsis thaliana] GI:14279543" 8 1 22 6 At5g16870 expressed protein 8 1 22 7 At5g16920 expressed protein 8 1 22 8 At5g17090 expressed protein 8 1 22 9 At5g17150 hypothetical protein 8 1 22 10 At5g17310 "UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative strong similarity to SP|P19595 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum}; contains Pfam profile PF01704: UTP--glucose-1-phosphate uridylyltransferase" 8 1 22 11 At5g17360 expressed protein 8 1 22 12 At5g19950 expressed protein 8 1 22 13 At5g19980 integral membrane family protein contains Pfam profile: PF00892 Integral membrane protein; similar to LPG2 protein (GI:9998817) [Leishmania mexicana] 8 1 22 14 At5g20140 SOUL heme-binding family protein contains PFam profile PF04832: SOUL heme-binding protein 8 1 22 15 At5g20170 expressed protein 8 1 22 16 At5g20350 "zinc finger (DHHC type) family protein / ankyrin repeat family protein similar to patsas protein [Drosophila melanogaster] GI:6002770; contains Pfam profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc finger domain" 8 1 22 17 At5g20410 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative identical to monogalactosyldiacylglycerol synthase [gi:3367638] from Arabidopsis thaliana, similar to MGDG synthase type A [gi:9884651] from Glycine max" 8 1 22 18 At5g20580 "expressed protein predicted protein, Arabidopsis thaliana" 8 1 22 19 At5g20635 expressed protein 8 1 22 20 At5g23930 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 8 1 22 21 At5g23990 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane component" 8 1 22 22 At5g24155 "squalene monooxygenase, putative / squalene epoxidase, putative similar to SP|O65404 (SE 1,1), SP|O65402 (SE 1,2)" 8 1 22 23 At5g24200 expressed protein ; expression supported by MPSS 8 1 22 24 At5g24320 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 8 1 22 25 At5g24360 protein kinase family protein / Ire1 homolog-1 (IRE1-1) identical to Ire1 homolog-1 [Arabidopsis thaliana] GI:15277137; cDNA Ire1 homolog-1 GI:15277136; 8 1 23 1 At5g24540 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 8 1 23 2 At5g24590 "turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC2 (GI:6456751) {Arabidopsis thaliana}; identical to cDNA TIP mRNA, GI:9408600" 8 1 23 3 At5g27520 mitochondrial substrate carrier family protein 8 1 23 4 At5g27580 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL89 8 1 23 5 At5g27750 F-box family protein contains F-box domain Pfam:PF00646 8 1 23 6 At5g27810 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 8 1 23 7 At5g27960 MADS-box protein (AGL90) 8 1 23 8 At5g28020 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to O-acetylserine(thiol) lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 8 1 23 9 At5g28220 "expressed protein predicted proteins, Arabidopsis thaliana, D.melanogaster, C.elegans and S.pombe" 8 1 23 10 At5g28270 "hypothetical protein similar to At2g12100, At2g05450, At1g45090, At2g16180, At2g06750" 8 1 23 11 At5g36200 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to unknown protein (pir||T00841) 8 1 23 12 At5g36260 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 8 1 23 13 At5g36800 expressed protein 8 1 23 14 At5g36880 "acetyl-CoA synthetase, putative / acetate-CoA ligase, putative similar to SP|P27550 (Escherichia coli) and gi:8439651 (Homo sapiens); contains Pfam AMP-binding enzyme domain PF00501" 8 1 23 15 At5g37050 "hypothetical protein hypothetical protein T28J14.60 - Arabidopsis thaliana, PIR:T48483" 8 1 23 16 At5g37100 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 8 1 23 17 At5g37270 "zinc finger (C3HC4-type RING finger) family protein ow similarity to RING-H2 finger protein RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam domain zinc finger, C3HC4 type (RING finger) PF00097" 8 1 23 18 At5g37340 zinc finger (ZPR1-type) family protein contains similarity to zinc-finger protein ZPR1 (Zinc finger protein 259) [Mus musculus] SWISS-PROT:Q62384 8 1 23 19 At5g40190 calmodulin-binding protein 8 1 23 20 At5g40250 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHX1a [Arabidopsis thaliana] GI:3790591; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 8 1 23 21 At5g40430 myb family transcription factor (MYB22) contains Pfam profile: PF00249 myb-like DNA-binding domain 8 1 23 22 At5g40490 "RNA recognition motif (RRM)-containing protein ribonucleoprotein, Xenopus laevis, PIR:S40778; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 1 23 23 At5g40620 hypothetical protein 8 1 23 24 At5g40670 PQ-loop repeat family protein / transmembrane family protein similar to SP|O60931 Cystinosin {Homo sapiens}; contains Pfam profile PF04193: PQ loop repeat 8 1 23 25 At5g40850 urophorphyrin III methylase (UPM1) identical to urophorphyrin III methylase (GI:1146165) [Arabidopsis thaliana]; similar to s-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase (GI:1490606) [Arabidopsis thaliana]; similar to Diphthine synthase (Diphtamide biosynthesis methyltransferase) (DPH5) (SP:P32469) [Saccharomyces cerevisiae]; contains Pfam PF00590 : Tetrapyrrole (Corrin/Porphyrin) Methylases domain; contains TIGRFAM PF00590: Tetrapyrrole (Corrin/Porphyrin) Methylases 8 1 24 1 At5g40900 "expressed protein similar to GI:2827651, GI:7527728, GI:4406788,GI:6063544, GI:10764853 from [Arabidopsis thaliana]; expression supported by MPSS" 8 1 24 2 At5g43580 "protease inhibitor, putative similar to SP|P19873 Inhibitor of trypsin and hageman factor (CMTI-V) {Cucurbita maxima}; contains Pfam profile PF00280: Potato inhibitor I family" 8 1 24 3 At5g43640 40S ribosomal protein S15 (RPS15E) 8 1 24 4 At5g43820 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 8 1 24 5 At5g43880 expressed protein 8 1 24 6 At5g44010 expressed protein 8 1 24 7 At5g44070 "phytochelatin synthase 1 (PCS1) identical to phytochelatin synthase [Arabidopsis thaliana] gi|18254401|gb|AAL66747; identical to cDNA phytochelatin synthase, GI:18254400" 8 1 24 8 At5g44240 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus musculus} SP|P70704, {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 8 1 24 9 At5g44300 dormancy/auxin associated family protein contains Pfam profile: PF05564 dormancy/auxin associated protein 8 1 24 10 At5g46800 "mitochondrial carnitine/acyl carrier, putative / a bout de souffle (BOU) / CAC-like protein identical to SP|Q93XM7 Mitochondrial carnitine/acylcarnitine carrier-like protein (A BOUT DE SOUFFLE) (Carnitine/acylcarnitine translocase-like protein) (CAC-like protein) {Arabidopsis thaliana}; contains Pfam profile: PF00153 mitochondrial carrier protein" 8 1 24 11 At5g46860 syntaxin 22 (SYP22) (VAM3) identical to GP|8809669| syntaxin related protein AtVam3p [Arabidopsis thaliana] 8 1 24 12 At5g47020 glycine-rich protein strong similarity to unknown protein (emb|CAB87688.1) 8 1 24 13 At5g47080 "casein kinase II beta chain, putative similar to casein kinase II beta chain (CK II) [Arabidopsis thaliana] SWISS-PROT:P40228" 8 1 24 14 At5g47225 hypothetical protein 8 1 24 15 At5g47280 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 8 1 24 16 At5g47440 expressed protein strong similarity to unknown protein (pir||G71442) 8 1 24 17 At5g47455 expressed protein 8 1 24 18 At5g50100 "expressed protein contains Pfam domain PF04134: Protein of unknown function, DUF393" 8 1 24 19 At5g50150 expressed protein strong similarity to unknown protein (gb|AAF04872.1) contains Pfam profile PF03080: Arabidopsis proteins of unknown function 8 1 24 20 At5g50310 kelch repeat-containing protein similar to Kelch repeats protein 3 (SP:Q08979) [Saccharomyces cerevisiae]; contains Pfam PF01344: Kelch motif (6 repeats) 8 1 24 21 At5g50360 expressed protein 8 1 24 22 At5g50530 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 8 1 24 23 At5g50580 "SUMO activating enzyme, putative nearly identical to SUMO activating enzyme 1b [Arabidopsis thaliana] GI:22652852; nearly identical to At5g50680; contains Pfam profile PF00899: ThiF family" 8 1 24 24 At5g50790 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 8 1 24 25 At5g50840 expressed protein 8 1 25 1 At5g53560 cytochrome b5 isoform 1 identical to SP|Q42342 Cytochrome b5 isoform 1 [Arabidopsis thaliana] 8 1 25 2 At5g53620 expressed protein 8 1 25 3 At5g53810 "O-methyltransferase, putative similar to GI:2781394" 8 1 25 4 At5g53860 expressed protein 8 1 25 5 At5g54000 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to Flavonol synthase (EC 1.14.11.-) (FLS) from Lisianthus russellianus] {Eustoma grandiflorum} [SP|Q9M547], Leucoanthocyanidin dioxygenase (LDOX) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) from Malus spp. [SP|P51091]; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 8 1 25 6 At5g54060 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 1 25 7 At5g54190 "protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophyllide oxidoreductase A (PORA) identical to SP:Q42536 protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) [Arabidopsis thaliana]" 8 1 25 8 At5g54250 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC4) identical to cyclic nucleotide and calmodulin-regulated ion channel (cngc4) GI:4581203 from [Arabidopsis thaliana] 8 1 25 9 At5g56970 FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase from Zea mays [gi:3882018] [gi:3341978] 8 1 25 10 At5g57020 myristoyl-CoA:protein N-myristoyltransferase 1 (NMT1) identical to N-myristoyltransferase 1 (NMT1) [Arabidopsis thaliana] GI:7339834 8 1 25 11 At5g57150 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 8 1 25 12 At5g57180 expressed protein ; supporting cDNA gi|13991645|gb|AF359387.1|AF359387 8 1 25 13 At5g57345 expressed protein 8 1 25 14 At5g57400 hypothetical protein 8 1 25 15 At5g57570 hypothetical protein 8 1 25 16 At5g57625 allergen V5/Tpx-1-related family protein low similarity to SP|Q40374 Pathogenesis-related protein PR-1 precursor {Medicago truncatula}; contains Pfam profile PF00188: SCP-like extracellular protein 8 1 25 17 At5g60160 "aspartyl aminopeptidase, putative similar to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21) {Homo sapiens}; contains Pfam profile PF02127: Aminopeptidase I zinc metalloprotease (M18)" 8 1 25 18 At5g60220 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 8 1 25 19 At5g60380 "hypothetical protein many predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 8 1 25 20 At5g60410 "DNA-binding family protein contains Pfam profiles: PF02037 SAP domain, PF02891 MIZ zinc finger, PF00628 PHD-finger" 8 1 25 21 At5g60580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 8 1 25 22 At5g60610 F-box family protein contains F-box domain Pfam:PF00646 8 1 25 23 At5g60770 "high-affinity nitrate transporter, putative strong similarity to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 8 1 25 24 At5g60830 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 8 1 25 25 At5g63510 bacterial transferase hexapeptide repeat-containing protein contains similarity to acetyltransferase; contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats) 8 1 26 1 At5g63570 "glutamate-1-semialdehyde 2,1-aminomutase 1 (GSA 1) / glutamate-1-semialdehyde aminotransferase 1 (GSA-AT 1) identical to GSA 1 [SP|P42799]" 8 1 26 2 At5g63740 zinc finger protein-related 8 1 26 3 At5g63800 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:7939621 from [Lycopersicon esculentum]; contains Pfam profile PF01301: Glycosyl hydrolases family 35 8 1 26 4 At5g63960 "DNA-directed DNA polymerase delta catalytic subunit, putative (POLD1) similar to DNA polymerase delta [Glycine max] GI:2895198, OsPol delta large subunit [Oryza sativa (japonica cultivar-group) GI:9188570; contains Pfam profiles: PF03175 DNA polymerase type B, organellar and viral, PF00136 DNA polymerase family B, PF03104 DNA polymerase family B, exonuclease domain" 8 1 26 5 At5g64000 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 8 1 26 6 At5g64170 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 8 1 26 7 At5g64210 "alternative oxidase 2, mitochondrial (AOX2) nearly identical to SP|O22049" 8 1 26 8 At5g66620 LIM domain-containing protein contains Pfam profile PF00412: LIM domain 8 1 26 9 At5g66675 expressed protein 8 1 26 10 At5g66820 expressed protein 8 1 26 11 At5g66880 "serine/threonine protein kinase, putative similar to serine-threonine protein kinase [Triticum aestivum] gi|2055374|gb|AAB58348" 8 1 26 12 At5g67030 "zeaxanthin epoxidase (ZEP) (ABA1) identical to GI:9857296 AtABA1; controls Pfam profiles PF01360: Monooxygenase and PF00498: FHA domain; identical to cDNA AtABA1, GI:9857295" 8 1 26 13 At5g67080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 1 26 14 At5g67240 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 8 1 26 15 At5g67290 FAD-dependent oxidoreductase family protein contains Pfam profile PF01266: FAD dependent oxidoreductase 8 1 26 16 At3g42630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 1 26 17 At3g42700 hypothetical protein 8 1 26 18 At3g42870 hypothetical protein 8 1 26 19 At3g42960 alcohol dehydrogenase (ATA1) identical to alcohol dehydrogenase (ATA1) GI:2501781 from [Arabidopsis thaliana] 8 1 26 20 At3g43250 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] 8 1 26 21 At3g43320 hypothetical protein 8 1 26 22 At3g43520 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 8 1 26 23 At3g43550 "GDSL-motif lipase, putative similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 8 1 26 24 Blank Blank 8 1 26 25 Blank Blank 8 2 1 1 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 8 2 1 2 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 8 2 1 3 Alien2 Control: Stratagene Spotreport Alien Oligo 8 2 1 4 Alien8 Control: Stratagene Spotreport Alien Oligo 8 2 1 5 atc04 Randomly generated negative control 8 2 1 6 atc10 Randomly generated negative control 8 2 1 7 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 8 2 1 8 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 8 2 1 9 At1g03457 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 2 1 10 At1g03510 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 2 1 11 At1g03700 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 8 2 1 12 At1g03760 prefoldin subunit family protein contains similarity to Swiss-Prot:O94763 RNA polymerase II subunit 5-mediating protein (RPB5-mediating protein) [Homo sapiens]; contains Pfam profile PF02996: Prefoldin subunit 8 2 1 13 At1g03890 "cupin family protein similar to Arabidopsis thaliana 12S seed storage proteins SP|P15455 [gi|808937] and SP|P15456, Brassica napus cruciferin storage protein, gi|762919, and others; contains Pfam profile PF00190 Cupin; Location of ESTs YAY049-3' end, gb|Z26364 and YAY049-5' end, gb|Z26363" 8 2 1 14 At1g03940 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 8 2 1 15 At1g04100 auxin-responsive protein / indoleacetic acid-induced protein 10 (IAA10) identical to SP|Q38828 Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) {Arabidopsis thaliana} 8 2 1 16 At1g04140 "transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to neural cell adhesion molecule 2, large isoform precursor gb|M76710 from Xenopus laevis, and beta transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from" 8 2 1 17 At1g06800 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 8 2 1 18 At1g06840 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor protein kinase GB:BAA11869 GI:1389566 from [Arabidopsis thaliana]" 8 2 1 19 At1g07020 expressed protein 8 2 1 20 At1g07070 60S ribosomal protein L35a (RPL35aA) similar to ribosomal protein L35a GI:57118 from [Rattus norvegicus] 8 2 1 21 At1g07250 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucose glucosyltransferase GI:453245 from [Manihot esculenta] 8 2 1 22 At1g07310 C2 domain-containing protein contains similarity to shock protein SRC2 [Glycine max] gi|2055230|dbj|BAA19769 ; contains Pfam profile PF00168:C2 domain 8 2 1 23 At1g07430 "protein phosphatase 2C, putative / PP2C, putative similar to GB:CAB90633 from [Fagus sylvatica]" 8 2 1 24 At1g07476 hypothetical protein 8 2 1 25 At1g09950 "transcription factor-related low similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423, SP|P23923 Transcription factor HBP-1b {Triticum aestivum}" 8 2 2 1 At1g09995 expressed protein 8 2 2 2 At1g10150 "expressed protein similar to ESTs gb|T20511, gb|T45308, gb|H36493, and gb|AA651176" 8 2 2 3 At1g10210 "mitogen-activated protein kinase, putative / MAPK, putative (MPK1) identical to mitogen-activated protein kinase homolog 1 (AtMPK1)[Arabidopsis thaliana] SWISS-PROT:Q39021; PMID:12119167" 8 2 2 4 At1g10380 expressed protein 8 2 2 5 At1g10430 serine/threonine protein phosphatase PP2A-1 catalytic subunit (PP2A1) identical to SP|Q07098 Serine/threonine protein phosphatase PP2A-1 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 8 2 2 6 At1g10580 transducin family protein / WD-40 repeat family protein similar to splicing factor hPRP17 (gi|3283220); contains 7 WD-40 repeats (PF00400);similar to ESTs emb|F15435 and dbj|AUO62661 8 2 2 7 At1g10620 "protein kinase family protein contains serine/threonine protein kinases active-site signature, PROSITE:PS00108" 8 2 2 8 At1g13280 "allene oxide cyclase family protein similar to ERD12 [GI:15320414], allene oxide cyclase GI:8977961 from [Lycopersicon esculentum]; contains Pfam profile PF06351: Allene oxide cyclase" 8 2 2 9 At1g13340 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 8 2 2 10 At1g13510 expressed protein 8 2 2 11 At1g13560 aminoalcoholphosphotransferase (AAPT1) identical to aminoalcoholphosphotransferase GI:3661593 from [Arabidopsis thaliana] 8 2 2 12 At1g13750 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 8 2 2 13 At1g13810 expressed protein ; expression supported by MPSS 8 2 2 14 At1g13990 expressed protein 8 2 2 15 At1g14060 expressed protein 8 2 2 16 At1g16680 "DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative similar to S-locus protein 5 GI:6069485 from [Brassica rapa]; contains Pfam profile PF00226 DnaJ domain" 8 2 2 17 At1g16730 expressed protein 8 2 2 18 At1g16880 uridylyltransferase-related similar to [Protein-PII] uridylyltransferase (PII uridylyl- transferase) (Uridylyl removing enzyme) (UTase)(SP:Q9AC53) [Caulobacter crescentus] 8 2 2 19 At1g16900 curculin-like (mannose-binding) lectin family protein very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 8 2 2 20 At1g17090 expressed protein Pfam 8 2 2 21 At1g17145 expressed protein 8 2 2 22 At1g17310 MADS-box protein (AGL100) similar to transcription factor GB:BAA25245 GI:2981610 from [Ceratopteris richardii]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 8 2 2 23 At1g17370 "oligouridylate-binding protein, putative similar to oligouridylate binding protein [Nicotiana plumbaginifolia] GI:6996560; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 2 2 24 At1g20260 "vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative strong similarity to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF02874: ATP synthase alpha/beta family beta-barrel domain" 8 2 2 25 At1g20320 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 8 2 3 1 At1g20500 4-coumarate--CoA ligase family / 4-coumaroyl-CoA synthase family similar to SP|Q42524 and SP|Q9S725; contains Pfam AMP-binding enzyme domain PF00501 8 2 3 2 At1g20540 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Rbap46 polypeptide (GI:9454362) [Gallus gallus] 8 2 3 3 At1g20693 high mobility group protein beta1 (HMGbeta1) / HMG protein beta1 nearly identical to HMG protein (HMGbeta1) [Arabidopsis thaliana] GI:2832359 8 2 3 4 At1g20740 expressed protein ; expression supported by MPSS 8 2 3 5 At1g20900 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 2 3 6 At1g20950 pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related similar to pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit SP:Q41140 from [Ricinus communis] 8 2 3 7 At1g23630 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 8 2 3 8 At1g23680 hypothetical protein contains Pfam profile PF02713: Domain of unknown function DUF220 8 2 3 9 At1g23840 expressed protein 8 2 3 10 At1g23890 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 8 2 3 11 At1g24040 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 8 2 3 12 At1g24090 "RNase H domain-containing protein very low similarity to GAG-POL precursor [Oryza sativa (japonica cultivar-group)] GI:5902445; contains Pfam profiles PF00075: RNase H, PF04134: Protein of unknown function, DUF393" 8 2 3 13 At1g24260 "MADS-box protein (AGL9) strongly similar to GB:O22456, MADS-box protein, Location of EST gb|H37053" 8 2 3 14 At1g24270 hypothetical protein 8 2 3 15 At1g28000 hypothetical protein 8 2 3 16 At1g28060 small nuclear ribonucleoprotein family protein / snRNP family protein contains similarity to U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo sapiens] gi|2708307|gb|AAC51926 8 2 3 17 At1g28190 expressed protein 8 2 3 18 At1g28230 purine permease (PUP1) identical to purine permease GI:7620007 from [Arabidopsis thaliana] 8 2 3 19 At1g28370 ERF domain protein 11 (ERF11) identical to ERF domain protein 11 (AtERF11) GI:15207789 from [Arabidopsis thaliana] 8 2 3 20 At1g28395 expressed protein 8 2 3 21 At1g28560 snRNA activating complex family protein similar to snRNA activating protein complex 50 kDa subunit (SNAPc 50 kDa subunit) (Proximal sequence element-binding transcription factor beta subunit) (PSE-binding factor beta subunit) (PTF beta subunit) (Swiss-Prot:Q92966) [Homo sapiens] 8 2 3 22 At1g28580 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 8 2 3 23 At1g31740 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor [Brassica oleracea] SWISS-PROT:P49676" 8 2 3 24 At1g31800 cytochrome P450 family protein similar to Cytochrome P450 97B2 (SP:048921) [Glycine max]; contains Pfam profile: PF00067: Cytochrome P450 8 2 3 25 At1g31950 "terpene synthase/cyclase family protein similar to sesquiterpene synthases [GI:11934937][Lycopersicon hirsutum], [GI:11934933][Lycopersicon esculentum]; contains Pfam profile: PF01397: Terpene synthase family" 8 2 4 1 At1g32020 F-box family protein similar to heat shock transcription factor HSF30-like protein GI:9759202 from [Arabidopsis thaliana] ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 8 2 4 2 At1g32210 "defender against cell death 1 (DAD1) identical to defender against cell death 1 (DAD-1, AtDAD1) [Arabidopsis thaliana] SWISS-PROT:Q39080" 8 2 4 3 At1g32250 "calmodulin, putative similar to calmodulin GB:M59770 GI:160127 from (Plasmodium falciparum); contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 8 2 4 4 At1g32390 hypothetical protein 8 2 4 5 At1g32415 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 2 4 6 At1g35930 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 8 2 4 7 At1g36050 expressed protein 8 2 4 8 At1g36390 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform b [Chlamydomonas reinhardtii] GI:15384279; contains Pfam profile PF01025: co-chaperone GrpE 8 2 4 9 At1g36670 hypothetical protein 8 2 4 10 At1g37037 hypothetical protein 8 2 4 11 At1g37150 holocarboxylase synthetase 2 (HCS2.d) identical to holocarboxylase synthetase hcs2.d [Arabidopsis thaliana] GI:19698373; contains non-consensus GG acceptor splice sites; contains Pfam profile PF03099: Biotin/lipoate A/B protein ligase family; contains TIGRfam profile TIGR00121: biotin--acetyl-CoA-carboxylase ligase; 8 2 4 12 At1g40390 hypothetical protein 8 2 4 13 At1g41830 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 8 2 4 14 At1g48200 expressed protein 8 2 4 15 At1g48260 CBL-interacting protein kinase 17 (CIPK17) identical to CBL-interacting protein kinase 17 [Arabidopsis thaliana] gi|14571553|gb|AAK64513 8 2 4 16 At1g48430 "dihydroxyacetone kinase family protein similar to dihydroxyacetone kinases; contains Pfam profiles PF02733: DAK1 domain, PF02734: DAK2 domain" 8 2 4 17 At1g48490 "protein kinase, putative similar to incomplete root hair elongation (IRE) [Arabidopsis thaliana] gi|6729346|dbj|BAA89783" 8 2 4 18 At1g48630 "guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative contains 7 WD-40 repeats (PF00400); very similar to guanine nucleotide-binding protein; activated protein kinase C receptor; RACK1 (GI:9294068) {Arabidopsis thaliana}; similar to WD-40 repeat auxin-dependent protein ARCA (SP:O24456) [Arabidopsis thaliana];" 8 2 4 19 At1g48690 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 8 2 4 20 At1g48870 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]; similar to rab11 binding protein GI:4512103 from [Bos taurus]" 8 2 4 21 At1g48940 plastocyanin-like domain-containing protein 8 2 4 22 At1g51920 expressed protein 8 2 4 23 At1g51970 hypothetical protein 8 2 4 24 At1g52150 "homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to to HD-zip transcription factor (athb-8) (GI:7270235) [Arabidopsis thaliana]; contains Pfam profiles PF01852: START domain, PF00046: Homeobox domain" 8 2 4 25 At1g52190 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 8 2 5 1 At1g52360 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); similar to (SP:O55029) Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus musculus]; similar to GI:298096 from [Homo sapiens]" 8 2 5 2 At1g52410 caldesmon-related weak similarity to Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus] 8 2 5 3 At1g52550 expressed protein 8 2 5 4 At1g52600 "signal peptidase, putative similar to SP|P13679 Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-) {Canis familiaris}; contains Pfam profile PF00461: Signal peptidase I" 8 2 5 5 At1g55280 expressed protein 8 2 5 6 At1g55330 arabinogalactan-protein (AGP21) 8 2 5 7 At1g55475 expressed protein 8 2 5 8 At1g55520 transcription initiation factor IID-2 (TFIID-2) / TATA-box factor 2 / TATA sequence-binding protein 2 (TBP2) identical to Swiss-Prot:P28148|TF22_ARATH Transcription initiation factor TFIID-2 (TATA-box factor 2) (TATA sequence-binding protein 2) (TBP-2) [Arabidopsis thaliana] 8 2 5 9 At1g55660 F-box family protein contains F-box domain Pfam:PF00646 8 2 5 10 At1g55700 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 2 5 11 At1g55870 "CAF1 family ribonuclease contains Pfam domain, PF04857: CAF1 family ribonuclease" 8 2 5 12 At1g55910 "metal transporter, putative (ZIP11) similar to putative zinc transporter ZIP2 [Arabidopsis thaliana] gi|3252868|gb|AAC24198; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 8 2 5 13 At1g60560 SWIM zinc finger family protein contains Pfam domain PF04434: SWIM zinc finger 8 2 5 14 At1g60630 "leucine-rich repeat family protein similar to receptor kinase GI:498278 from [Petunia integrifolia]; contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 8 2 5 15 At1g60810 ATP citrate-lyase -related similar to ATP citrate-lyase GI:949989 from [Rattus norvegicus] 8 2 5 16 At1g60860 ARF GTPase-activating domain-containing protein 8 2 5 17 At1g61010 "cleavage and polyadenylation specificity factor, putative similar to cleavage and polyadenylation specificity factor 73 kDa subunit [Homo sapiens] SWISS-PROT:Q9UKF6" 8 2 5 18 At1g61070 "plant defensin-fusion protein, putative (PDF2.4) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); contains gamma-thionin domain" 8 2 5 19 At1g61215 DNA-binding bromodomain-containing protein contains Pfam profile PF00439: Bromodomain 8 2 5 20 At1g61280 expressed protein similar to SP|P57054 Down syndrome critical region protein 5 (Down syndrome critical region protein C) {Homo sapiens}; expression supported by MPSS 8 2 5 21 At1g64040 "serine/threonine protein phosphatase PP1 isozyme 3 (TOPP3) / phosphoprotein phosphatase 1 identical to SP|P48483 Serine/threonine protein phosphatase PP1 isozyme 3 (EC 3.1.3.16) {Arabidopsis thaliana}, phosphoprotein phosphatase 1 GB:AAA32838 GI:166799 from [Arabidopsis thaliana]" 8 2 5 22 At1g64090 reticulon family protein (RTNLB3) weak similarity to SP|O95197 Reticulon protein 3 (Neuroendocrine-specific protein-like) {Homo sapiens}; contains Pfam profile PF02453: Reticulon 8 2 5 23 At1g64260 "zinc finger protein-related contains Pfam profiles PF03108: MuDR family transposase, PF04434: SWIM zinc finger" 8 2 5 24 At1g64320 myosin heavy chain-related similar to myosin heavy chain (GI:4249703) [Rana catesbeiana]; similar to smooth muscle myosin heavy chain SM2 (GI:2352945) [Homo sapiens] 8 2 5 25 At1g64480 calcineurin B-like protein 8 (CBL8) identical to calcineurin B-like protein 8 (GI:15866276) [Arabidopsis thaliana]; similar to CALCINEURIN B SUBUNIT GB:P25296 from [Saccharomyces cerevisiae] 8 2 6 1 At1g64540 F-box family protein contains F-box domain Pfam:PF00646 8 2 6 2 At1g64710 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]" 8 2 6 3 At1g64760 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 8 2 6 4 At1g67570 expressed protein 8 2 6 5 At1g67630 DNA polymerase alpha subunit B family contains Pfam profile: PF04058 DNA polymerase alpha subunit B 8 2 6 6 At1g67780 hypothetical protein 8 2 6 7 At1g67830 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 8 2 6 8 At1g67950 RNA recognition motif (RRM)-containing protein 8 2 6 9 At1g67980 "caffeoyl-CoA 3-O-methyltransferase, putative similar to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa]" 8 2 6 10 At1g68140 expressed protein 8 2 6 11 At1g68190 zinc finger (B-box type) family protein 8 2 6 12 At1g70850 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 8 2 6 13 At1g70900 expressed protein 8 2 6 14 At1g71070 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein similar to glucosaminyl (N-acetyl) transferase GB:4758422 from [Homo sapiens] 8 2 6 15 At1g71130 "AP2 domain-containing transcription factor, putative " 8 2 6 16 At1g71300 Vps52/Sac2 family protein similar to SP|P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family 8 2 6 17 At1g71340 glycerophosphoryl diester phosphodiesterase family protein contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 8 2 6 18 At1g71530 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 8 2 6 19 At1g71691 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 Lipase Acylhydrolase with GDSL-like motif" 8 2 6 20 At1g74400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 domain of unknown function 8 2 6 21 At1g74440 expressed protein similar to YGL010w-like protein GB:AAC32136 [Picea mariana] 8 2 6 22 At1g74620 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 2 6 23 At1g74680 exostosin family protein contains Pfam profile: PF03016 Exostosin family 8 2 6 24 At1g74860 expressed protein 8 2 6 25 At1g74910 ADP-glucose pyrophosphorylase family protein contains Pfam profile PF00483: Nucleotidyl transferase; low similarity to mannose-1-phosphate guanylyltransferase [Hypocrea jecorina] GI:3323397 8 2 7 1 At1g75080 brassinosteroid signalling positive regulator (BZR1) identical to to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 8 2 7 2 At1g75140 expressed protein 8 2 7 3 AT5G57480 PC-1 B05 8 2 7 4 3XSSC PC-1 B17 8 2 7 5 AT1G29930 PC-1 F05 8 2 7 6 3XSSC PC-1 F17 8 2 7 7 AT3G44150 PC-1 J05 8 2 7 8 3XSSC PC-1 J17 8 2 7 9 AT4G00810 PC-1 N05 8 2 7 10 3XSSC PC-1 N17 8 2 7 11 At1g77860 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 8 2 7 12 At1g77920 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 8 2 7 13 At1g78080 AP2 domain-containing transcription factor RAP2.4 identical to AP2 domain containing protein GI:2281633 from [Arabidopsis thaliana] 8 2 7 14 At1g78140 methyltransferase-related similar to Probable delta(24)-sterol C-methyltransferase (Swiss-Prot:O14321) [Schizosaccharomyces pombe]; similar to C5-O-methyltransferase (GI:5921167) [Streptomyces avermitilis]; similar to S-adenosyl-methionine-sterol-C- methyltransferase (GI:3560474) [Nicotiana tabacum] 8 2 7 15 At1g78290 "serine/threonine protein kinase, putative similar to serine-threonine protein kinase [Triticum aestivum] gi|2055374|gb|AAB58348" 8 2 7 16 At1g78360 "glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya]" 8 2 7 17 At1g78540 transcription factor-related weak similarity to STAT protein (GI:2230824) and STATc protein (GI:13235235) [Dictyostelium discoideum] 8 2 7 18 At1g78600 zinc finger (B-box type) family protein similar to zinc finger protein GI:3618316 from [Oryza sativa] 8 2 7 19 At2g01175 expressed protein 8 2 7 20 At2g01200 auxin-responsive AUX/IAA family protein contains Pfam profile: PF02309 AUX/IAA family 8 2 7 21 At2g01330 transducin family protein / WD-40 repeat family protein contains 10 WD-40 repeats (PF00400); similar to 66kDa stress protein (SWISS-PROT: P90587)[ Physarum polycephalum (Slime mold)] 8 2 7 22 At2g01400 expressed protein 8 2 7 23 At2g01560 hypothetical protein 8 2 7 24 At2g01620 expressed protein 8 2 7 25 At2g01760 two-component responsive regulator family protein / response regulator family protein similar to response regulator 9 (GI:14189890) [Zea mays]; similar to ARR1 protein (GI:4210449) [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 8 2 8 1 At2g01820 "leucine-rich repeat protein kinase, putative similar to protein kinase TMK1 gi|166888|gb|AAA32876; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain" 8 2 8 2 At2g04940 scramblase-related weak similarity to Phospholipid scramblase 1 (PL scramblase 1) (Ca(2 )-dependent phospholipid scramblase 1) (Transplantability associated protein 1) (TRA1) (NOR1) (Swiss-Prot:Q9JJ00) [Mus musculus]; weak similarity to Phospholipid scramblase 4 (PL scramblase 4) (Ca(2 )-dependent phospholipid scramblase 4) (Swiss-Prot:Q9NRQ2) [Homo sapiens] 8 2 8 3 At2g05080 "hypothetical protein low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 8 2 8 4 At2g05290 expressed protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 8 2 8 5 At2g05360 hypothetical protein 8 2 8 6 At2g05590 expressed protein similar to nucleolar protein C7C (GI:13540302) [Rattus norvegicus] 8 2 8 7 At2g05635 hypothetical protein 8 2 8 8 At2g05870 cytochrome P-450 aromatase-related similar to minor outer capsid protein VP4 (GI:13446784) [Human rotavirus C]; similar to cytochrome P-450 aromatase (GI:21170) [Gallus gallus]; 8 2 8 9 At2g05920 subtilase family protein contains similarity to cucumisin-like serine protease GI:3176874 from [Arabidopsis thaliana] 8 2 8 10 At2g14050 minichromosome maintenance family protein / MCM family protein low similarity to SP|P49736 DNA replication licensing factor MCM2 {Homo sapiens}; contains Pfam profile PF00493: MCM2/3/5 family 8 2 8 11 At2g14110 expressed protein 8 2 8 12 At2g14390 hypothetical protein 8 2 8 13 At2g14510 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 8 2 8 14 At2g14690 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 8 2 8 15 At2g14750 "adenylylsulfate kinase 1 (AKN1) identical to adenylylsulfate kinase 1, chloroplast precursor (APS kinase, Adenosine-5'phosphosulfate kinase, ATP adenosine-5'- phosphosulfate 3'-phosphotransferase) [Arabidopsis thaliana] SWISS-PROT:Q43295" 8 2 8 16 At2g14890 arabinogalactan-protein (AGP9) identical to gi|10880495|gb|AAG24277 8 2 8 17 At2g14910 expressed protein 8 2 8 18 At2g18020 60S ribosomal protein L8 (RPL8A) 8 2 8 19 At2g18050 "histone H1-3 (HIS1-3) similar to histone H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3 [Arabidopsis thaliana] GI:1809305" 8 2 8 20 At2g18200 hypothetical protein 8 2 8 21 At2g18240 "RER1 protein, putative similar to SP|O48671 RER1B protein (AtRER1B) {Arabidopsis thaliana}, SP|O48670 RER1A protein (AtRER1A) {Arabidopsis thaliana}; contains Pfam profile PF03248: Rer1 family" 8 2 8 22 At2g18400 ribosomal protein L6 family protein 8 2 8 23 At2g18460 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502); contains non-consensus splice sites" 8 2 8 24 At2g18630 expressed protein unusual splice site at second intron; GA instead of conserved GT at donor site; similar to At14a GI:11994571 and GI:11994573 [Arabidopsis thaliana] 8 2 8 25 At2g18690 expressed protein 8 2 9 1 At2g21340 "enhanced disease susceptibility protein, putative / salicylic acid induction deficient protein, putative similar to enhanced disease susceptibility 5 [Arabidopsis thaliana] GI:16589070" 8 2 9 2 At2g21400 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 8 2 9 3 At2g21590 "glucose-1-phosphate adenylyltransferase large subunit, putative / ADP-glucose pyrophosphorylase, putative strong similarity to SP|P55231" 8 2 9 4 At2g21630 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 8 2 9 5 At2g21830 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 2 9 6 At2g21870 expressed protein 8 2 9 7 At2g22040 "transducin family protein / WD-40 repeat family protein similar to Pop3 (GI:3434986) [Schizosaccharomyces pombe]; contains Pfam PF00400: WD domain, G-beta repeat (6 copies, 2 weak);" 8 2 9 8 At2g22090 UBP1 interacting protein 1a (UBA1a) nearly identical to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); based on cDNA of partial mRNA for UBP1 interacting protein 1a (uba1a) GI:19574235 8 2 9 9 At2g24970 expressed protein 8 2 9 10 At2g25060 plastocyanin-like domain-containing protein 8 2 9 11 At2g25240 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 8 2 9 12 At2g25300 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 2 9 13 At2g25480 expressed protein 8 2 9 14 At2g25540 "cellulose synthase, catalytic subunit, putative similar to cellulose synthase-1 [gi:9622874] and -2 [gi:9622876] from Zea mays" 8 2 9 15 At2g25680 expressed protein ; expression supported by MPSS 8 2 9 16 At2g25735 expressed protein 8 2 9 17 At2g28340 zinc finger (GATA type) family protein and genefinder 8 2 9 18 At2g28390 SAND family protein similar to Sand (GI:3928166) [Takifugu rubripes]; contains Pfam PF03164: SAND family protein 8 2 9 19 At2g28550 AP2 domain-containing transcription factor RAP2.7 (RAP2.7) nearly identical to AP2 domain transcription factor RAP2.7 (GI:2281639) [Arabidopsis thaliana] 8 2 9 20 At2g28605 expressed protein 8 2 9 21 At2g28780 expressed protein 8 2 9 22 At2g28820 ribosomal protein L16 family protein contains Pfam PF00252 domain ribosomal protein L16 8 2 9 23 At2g29020 Rab5-interacting family protein similar to Protein C20orf24 (Rab5-interacting protein) (RIP5) (PNAS-11) (Swiss-Prot:Q9BUV8) [Homo sapiens]; contains transmembrane domains 8 2 9 24 At2g29070 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 8 2 9 25 At2g31760 zinc finger protein-related contains low similarity to zinc finger proteins and Pfam PF01485: IBR domain 8 2 10 1 At2g31810 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 8 2 10 2 At2g31960 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase; contains non-consensus splice aite AC at exon 33" 8 2 10 3 At2g32010 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 8 2 10 4 At2g32180 expressed protein 8 2 10 5 At2g32235 expressed protein 8 2 10 6 At2g32370 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 8 2 10 7 At2g32430 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 2 10 8 At2g35010 thioredoxin family protein similar to SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa}; contains Pfam profile: PF00085 Thioredoxin 8 2 10 9 At2g35060 "potassium transporter family protein similar to HAK2 [Hordeum vulgare] GI:7108599, potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 8 2 10 10 At2g35210 human Rev interacting-like family protein / hRIP family protein similar to ARFGAP1 protein GI:7211442 from [Homo sapiens]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 8 2 10 11 At2g35270 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 2 10 12 At2g35460 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum]; 8 2 10 13 At2g35520 "defender against cell death 2 (DAD2) identical to defender against cell death 2 (DAD-2, AtDAD2) [Arabidopsis thaliana] SWISS-PROT:O22622" 8 2 10 14 At2g35640 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 8 2 10 15 At2g35680 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 8 2 10 16 At2g38250 DNA-binding protein-related contains similarity to DNA-binding protein GI:170271 from [Nicotiana tabacum] 8 2 10 17 At2g38310 "expressed protein low similarity to early flowering protein 1 [Asparagus officinalis] GI:1572683, SP|P80889 Ribonuclease 1 (EC 3.1.-.-) {Panax ginseng}" 8 2 10 18 At2g38470 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain; 8 2 10 19 At2g38540 nonspecific lipid transfer protein 1 (LTP1) identical to SP|Q42589 8 2 10 20 At2g38710 AMMECR1 family similar to AMMECR1 (GI:6063688) [Homo sapiens]; contains Pfam profile PF01871: AMMECR1 8 2 10 21 At2g38770 expressed protein 8 2 10 22 At2g38880 histone-like transcription factor (CBF/NF-Y) family protein similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays] and CCAAT-binding transcription factor subunit A (CBF-A) (NF-Y protein chain B) (NF-YB) (CAAT-box DNA binding protein subunit B) (SP:P25210) [Petromyzon marinus]; contains a CBF/NF-Y subunit signature (PDOC00578) presernt in members of histone-like transcription factor family; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 2 10 23 At2g38910 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase, isoform AK1 (CDPK) [Arabidopsis thaliana] SWISS-PROT:Q06850; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 8 2 10 24 At2g41450 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to Swift [Xenopus laevis] GI:14164561; contains Pfam profiles PF00583: acetyltransferase, GNAT family, PF00533: BRCA1 C Terminus (BRCT) domain" 8 2 10 25 At2g41510 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase, Zea mays [gi:3882018] [gi:3441978]" 8 2 11 1 At2g41660 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 8 2 11 2 At2g41710 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana];Pfam domain (PF00847)" 8 2 11 3 At2g41840 40S ribosomal protein S2 (RPS2C) 8 2 11 4 At2g41890 "curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein contains Pfam profiles: PF01453 lectin (probable mannose binding), PF00024 PAN domain" 8 2 11 5 At2g42050 hypothetical protein similar to SP|Q07981 FMRFamide-related peptides precursor HF-4 (HeptaFaRP) {Helix aspersa}; contains Pfam profile PF03778: Protein of unknown function (DUF321) 8 2 11 6 At2g42110 expressed protein 8 2 11 7 At2g44700 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; 8 2 11 8 At2g44750 "thiamin pyrophosphokinase, putative similar to thiamin pyrophosphokinase [Mus musculus] gi|6468206|dbj|BAA87040" 8 2 11 9 At2g44920 "thylakoid lumenal 15 kDa protein, chloroplast identical to SP|O22160 Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) {Arabidopsis thaliana}; contains 8 pentapeptide repeats" 8 2 11 10 At2g44970 lipase-related contains weak similarity to lipase [Pseudomonas aeruginosa] gi|3550950|gb|AAC34733. 8 2 11 11 At2g45130 "SPX (SYG1/Pho81/XPR1) domain-containing protein weak similarity to NUC-2 [Neurospora crassa] GI:1399532, xenotropic and polytropic murine leukemia virus receptor [Mus musculus castaneus] GI:6093320; contains Pfam profile PF03105: SPX domain" 8 2 11 12 At2g45170 "autophagy 8e (APG8e) identical to autophagy 8e [Arabidopsis thaliana] GI:19912159; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 8 2 11 13 At2g45360 expressed protein 8 2 11 14 At2g45430 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 2 11 15 At2g48030 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 8 2 11 16 At2g48080 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 8 2 11 17 At3g01030 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 8 2 11 18 At3g01070 plastocyanin-like domain-containing protein 8 2 11 19 At3g01220 "homeobox-leucine zipper protein, putative / HD-ZIP transcription factor, putative similar to homeobox-leucine zipper protein, HAT7 (GB:Q00466) [Arabidopsis thaliana]" 8 2 11 20 At3g01280 "porin, putative similar to SP|P42055 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) {Solanum tuberosum}; contains Pfam profile PF01459: Eukaryotic porin" 8 2 11 21 At3g01410 RNase H domain-containing protein low similarity to GAG-POL precursor [Oryza sativa (japonica cultivar-group)] GI:5902445; contains Pfam profile: PF00075 RNase H 8 2 11 22 At3g01460 "PHD finger family protein / methyl-CpG binding domain-containing protein contains Pfam profiles PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG binding domain" 8 2 11 23 At3g04030 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 8 2 11 24 At3g04080 apyrase (APY1) identical to apyrase (Atapy1) GI:6002631 from [Arabidopsis thaliana] 8 2 11 25 At3g04260 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 8 2 12 1 At3g04310 expressed protein 8 2 12 2 At3g04470 expressed protein 8 2 12 3 At3g04530 "phosphoenolpyruvate carboxylase kinase 2 (PPCK2) phosphoenolpyruvate carboxylase kinase 2 [Arabidopsis thaliana] gi|13877128|gb|AAK43710; contains protein kinase domain, Pfam:PF00069" 8 2 12 4 At3g04660 F-box family protein contains F-box domain Pfam:PF00646 8 2 12 5 At3g04720 hevein-like protein (HEL) identical to SP|P43082 Hevein-like protein precursor {Arabidopsis thaliana}; similar to SP|P09762 Wound-induced protein WIN2 precursor {Solanum tuberosum}; contains Pfam profile PF00187: Chitin recognition protein 8 2 12 6 At3g07195 proline-rich family protein 8 2 12 7 At3g07260 forkhead-associated domain-containing protein / FHA domain-containing protein contains Pfam profile: PF00498 Forkhead-associated (FHA) domain (putative nuclear protein) 8 2 12 8 At3g07425 expressed protein 8 2 12 9 At3g07460 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 8 2 12 10 At3g07590 "small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative similar to SWISS-PROT:SP|P13641 small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1, Sm-D1, Sm-D autoantigen)[Mouse]" 8 2 12 11 At3g07650 zinc finger (B-box type) family protein similar to zinc finger protein GB:BAA33206 [Oryza sativa] 8 2 12 12 At3g07790 DGCR14-related similar to DGCR14 protein (DiGeorge syndrome critical region 14) (ES2 protein) (Swiss-Prot:Q96DF8) [Homo sapiens] 8 2 12 13 At3g07840 "polygalacturonase, putative / pectinase, putative strong similarity to polygalacturonase PGA3 [Arabidopsis thaliana] GI:3152948; contains non-consensus AA acceptor splice site at exon 3" 8 2 12 14 At3g10815 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 8 2 12 15 At3g10860 "ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative similar to ubiquinol--cytochrome c reductase GI:633687 from [Solanum tuberosum]" 8 2 12 16 At3g10980 expressed protein 8 2 12 17 At3g11020 DRE-binding protein (DREB2B) identical to DREB2B GI:3738232 from [Arabidopsis thaliana]; supported by cDNA:gi_3738231_dbj_AB007791.1_AB007791 8 2 12 18 At3g11200 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 8 2 12 19 At3g11260 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana]; supporting cDNA gi|24953994|gb|AY150812.1| 8 2 12 20 At3g11400 eukaryotic translation initiation factor 3G / eIF3g nearly identical to eukaryotic translation initiation factor 3g [Arabidopsis thaliana] GI:12407751 8 2 12 21 At3g11450 "DNAJ heat shock N-terminal domain-containing protein / cell division protein-related similar to GlsA [Volvox carteri f. nagariensis] GI:4633129; contains Pfam profiles PF00226 DnaJ domain, PF00249 Myb-like DNA-binding domain" 8 2 12 22 At3g13820 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 8 2 12 23 At3g13860 "chaperonin, putative similar to SWISS-PROT:P29197- chaperonin CPN60, mitochondrial precursor (HSP60) [Arabidopsis thaliana] ; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 8 2 12 24 At3g14030 hypothetical protein 8 2 12 25 At3g14075 "lipase class 3 family protein low similarity to calmodulin-binding heat-shock protein CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam profile PF01764: Lipase, PF03893: Lipase 3 N-terminal region" 8 2 13 1 At3g14200 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|O75190|DJB6_HUMAN DnaJ homolog subfamily B member 6 (Heat shock protein J2) {Homo sapiens}; contains Pfam profile PF00226 DnaJ domain 8 2 13 2 At3g14230 AP2 domain-containing protein RAP2.2 (RAP2.2) identical to AP2 domain containing protein RAP2.2 GI:2281629 from [Arabidopsis thaliana] 8 2 13 3 At3g14380 integral membrane family protein similar to unknown protein GB:AAD50013 from [Arabidopsis thaliana]; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588); contains 4 transmembrane domains 8 2 13 4 At3g14420 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414" 8 2 13 5 At3g17000 "ubiquitin-conjugating enzyme, putative similar to Non-Canonical UBiquitin Conjugating Enzyme 1 (NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus] GI:7363050, [Homo sapiens] GI:7362973; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 8 2 13 6 At3g17070 "peroxidase, putative similar to peroxidase GB:AAD37376 [Glycine max]" 8 2 13 7 At3g17205 HECT-domain-containing protein / ubiquitin-transferase family protein weak similarity to ubiquitin-protein ligase 2 [Arabidopsis thaliana] GI:7108523; contains Pfam profile PF00632: HECT-domain (ubiquitin-transferase) 8 2 13 8 At3g17240 "dihydrolipoamide dehydrogenase 2, mitochondrial / lipoamide dehydrogenase 2 (MTLPD2) nearly identical to GB:AAF34796 [gi:6984216] from [Arabidopsis thaliana]; alternative splice form exists" 8 2 13 9 At3g17400 F-box family protein contains Pfam profile: PF00646 F-box domain 8 2 13 10 At3g17460 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 8 2 13 11 At3g17609 bZIP transcription factor family protein / HY5-like protein (HYH) nearly identical to HY5-like protein [Arabidopsis thaliana] GI:18042111; similar to TGACG-motif binding factor GI:2934884 from [Glycine max]; contains Pfam profile: PF00170 bZIP transcription factor 8 2 13 12 At3g17630 "cation/hydrogen exchanger, putative (CHX19) similar to putative Na+/H+-exchanging protein GB:CAA23036 from [Arabidopsis thaliana]; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 8 2 13 13 At3g20300 expressed protein 8 2 13 14 At3g20340 expressed protein 8 2 13 15 At3g20510 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 8 2 13 16 At3g20560 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin 8 2 13 17 At3g20740 fertilization-independent endosperm protein (FIE) contains 6 WD-40 repeats (PF00400); identical to fertilization-independent endosperm protein (GI:4567095) [Arabidopsis thaliana] 8 2 13 18 At3g20800 "rcd1-like cell differentiation protein, putative similar to protein involved in sexual development [Schizosaccharomyces pombe] GI:1620896; contains Pfam profile PF04078: Cell differentiation family, Rcd1-like" 8 2 13 19 At3g20950 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]; 8 2 13 20 At3g21060 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to Retinoblastoma-binding protein 5 (RBBP-5) [Homo sapiens](RBQ-3) 8 2 13 21 At3g23750 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 8 2 13 22 At3g23805 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 8 2 13 23 At3g23970 F-box family protein contains Pfam:PF00646 F-box domain 8 2 13 24 At3g24030 hydroxyethylthiazole kinase family protein contains Pfam profile: PF02110 hydroxyethylthiazole kinase family 8 2 13 25 At3g24180 "expressed protein contains Pfam domain PF04685: Protein of unknown function, DUF608" 8 2 14 1 At3g24230 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 8 2 14 2 At3g24390 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At4g05280, At1g25886, At4g03300" 8 2 14 3 At3g24480 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 8 2 14 4 At3g27200 plastocyanin-like domain-containing protein contains similarity to uclacyanin I GI:3399767 GB:AAC32038 from [Arabidopsis thaliana] 8 2 14 5 At3g27260 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 8 2 14 6 At3g27410 expressed protein 8 2 14 7 At3g27460 expressed protein 8 2 14 8 At3g27630 hypothetical protein 8 2 14 9 At3g27690 chlorophyll A-B binding protein (LHCB2:4) nearly identical to Lhcb2 protein [Arabidopsis thaliana] GI:4741950; similar to chlorophyll A-B binding protein 151 precursor (LHCP) GB:P27518 from [Gossypium hirsutum]; contains Pfam PF00504: Chlorophyll A-B binding protein 8 2 14 10 At3g27890 NADPH-dependent FMN reductase family protein contains Pfam profile: PF03358 NADPH-dependent FMN reductase 8 2 14 11 At3g27940 LOB domain family protein / lateral organ boundaries domain family protein (LBD26) identical to SP|Q9LIJ0 LOB domain protein 26 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 8 2 14 12 At3g32070 hypothetical protein 8 2 14 13 At3g32140 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 8 2 14 14 At3g32910 "hypothetical protein similar to At2g15200, At2g04970, At1g32830, At2g14140, At4g03990" 8 2 14 15 At3g33064 hypothetical protein 8 2 14 16 At3g42110 hypothetical protein 8 2 14 17 At3g42155 hypothetical protein 8 2 14 18 At3g42410 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 8 2 14 19 At3g42480 hypothetical protein 8 2 14 20 At3g45580 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature" 8 2 14 21 At3g45640 "mitogen-activated protein kinase, putative / MAPK, putative (MPK3) identical to mitogen-activated protein kinase homolog (AtMPK3)[Arabidopsis thaliana] SWISS-PROT:Q39023; PMID:12119167" 8 2 14 22 At3g45800 hypothetical protein 8 2 14 23 At3g45860 "receptor-like protein kinase, putative similar to receptor-like protein kinase 4 (gi:13506745), 5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis thaliana; contains Pfam protein kinase domain PF00069" 8 2 14 24 At3g46040 "40S ribosomal protein S15A (RPS15aD) cytoplasmic ribosomal protein S15a, Arabidopsis thaliana, EMBL:ATAF1412" 8 2 14 25 At3g46100 histidyl-tRNA synthetase / histidine--tRNA ligase identical to histidyl-tRNA synthetase [Arabidopsis thaliana] GI:3659909 8 2 15 1 At3g46290 "protein kinase, putative similar to receptor-like protein kinase [Catharanthus roseus] gi|1644291|emb|CAA97692" 8 2 15 2 At3g46350 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 8 2 15 3 At3g49140 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 2 15 4 At3g49200 hypothetical protein 8 2 15 5 At3g49360 glucosamine/galactosamine-6-phosphate isomerase family protein similar to SP|O95336 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) {Homo sapiens}; contains Pfam profile PF01182: Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase 8 2 15 6 At3g49420 Got1-like family protein contains Pfam profile: PF04178 Got1-like family 8 2 15 7 At3g49600 "ubiquitin-specific protease 26 (UBP26) similar to GI:11993492; RNA binding protein - Homo sapiens, EMBL:AB016089 (N-terminus), several ubiquitin carboxyl-terminal hydrolases from aa pos. 712" 8 2 15 8 At3g49660 "transducin family protein / WD-40 repeat family protein beta-transducin, Schizosaccharomyces pombe, EMBL:CAA17803" 8 2 15 9 At3g49840 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 8 2 15 10 At3g49900 "BTB/POZ domain-containing protein contains BTB/POZ domain, INTERPRO:IPR000210" 8 2 15 11 At3g52610 expressed protein 8 2 15 12 At3g52660 "RNA recognition motif (RRM)-containing protein heterogeneous nuclear ribonucleoprotein R, Homo sapiens, PIR:T02673; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 2 15 13 At3g52800 "zinc finger (AN1-like) family protein contains Pfam domain, PF01428: AN1-like Zinc finger" 8 2 15 14 At3g52860 expressed protein 8 2 15 15 At3g53000 F-box family protein / SKP1 interacting partner 3-related low similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951; contains Pfam profile PF00646: F-box domain 8 2 15 16 At3g53060 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At6), putative E3 ubiquitin ligase; similar to Skp1 GI:4959710 from [Medicago sativa]" 8 2 15 17 At3g53232 expressed protein 8 2 15 18 At3g53270 "expressed protein endopeptidase Clp ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079" 8 2 15 19 At3g55870 "anthranilate synthase, alpha subunit, putative similar to anthranilate synthase alpha subunit, Ruta graveolens, EMBL:RGANTSYNB [gi:960291], Arabidopsis thaliana [SP|P32068]" 8 2 15 20 At3g55910 "expressed protein PA26, p53 regulated PA26-T3 nuclear protein, Homo sapiens, EMBL:AF033121" 8 2 15 21 At3g56090 "ferritin, putative similar to ferritin subunit cowpea2 precursor [Vigna unguiculata] GI:2970654; contains Pfam profile PF00210: Ferritin-like domain" 8 2 15 22 At3g56130 biotin/lipoyl attachment domain-containing protein low similarity to SP|Q06881 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.}; contains Pfam profile PF00364: Biotin-requiring enzyme 8 2 15 23 At3g56310 "alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative similar to alpha-galactosidase SP:Q42656 from [Coffea arabica]" 8 2 15 24 At3g56370 "leucine-rich repeat transmembrane protein kinase, putative leucine-rich receptor-like protein kinase - Malus domestica, EMBL:AF053127" 8 2 15 25 At3g56550 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 2 16 1 At3g56610 expressed protein 8 2 16 2 At3g59430 expressed protein 8 2 16 3 At3g59480 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 8 2 16 4 At3g59670 expressed protein ; expression supported by MPSS 8 2 16 5 At3g59710 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 8 2 16 6 At3g59880 "expressed protein hypothetical protein F6E13.14 - Arabidopsis thaliana, PIR:T00681; expression supported by MPSS" 8 2 16 7 At3g59920 Rab GDP dissociation inhibitor (GDI2) identical to Rab GDP dissociation inhibitor AtGDI2 [Arabidopsis thaliana] GI:2446981 8 2 16 8 At3g60080 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 2 16 9 At3g60140 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to Cyanogenic Beta-Glucosidase (GI:1311386)(pdb:1CBG) [Trifolium Repens]; identical beta-glucosidase GI:10834547 8 2 16 10 At3g62850 "zinc finger protein-related contains Pfam profiles PF04396: Protein of unknown function DUF537, weak hit to PF00096: Zinc finger, C2H2 type" 8 2 16 11 At3g62910 "peptide chain release factor, putative similar to peptide chain release factor 1 [Escherichia coli] GI:147567; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 8 2 16 12 At3g63090 expressed protein 8 2 16 13 At3g63150 GTP-binding protein-related low similarity to SP|Q38912 RAC-like GTP binding protein ARAC3 (GTP-binding protein ROP6) {Arabidopsis thaliana}; contains Pfam profile PF00036: EF hand (domain) 8 2 16 14 At3g63280 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 2 16 15 At3g63320 "protein phosphatase 2C-related / PP2C-related protein phosphatase 2C - Rattus norvegicus, EMBL:AF095927" 8 2 16 16 At3g63460 "WD-40 repeat family protein hypothetical protein contains similarity to ec31p [Oryza sativa] gi|13928450|dbj|BAB47154; contains Pfam profile PF00400: WD domain, G-beta repeat" 8 2 16 17 At3g63500 expressed protein 8 2 16 18 At4g02350 exocyst complex subunit Sec15-like family protein contains Pfam profile PF04091: Exocyst complex subunit Sec15-like 8 2 16 19 At4g02405 expressed protein 8 2 16 20 At4g02550 expressed protein 8 2 16 21 At4g02600 "seven transmembrane MLO family protein / MLO-like protein 1 (MLO1) identical to MLO-like protein 1 (MLO protein homolog 1) [Arabidopsis thaliana] SWISS-PROT:O49621; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 8 2 16 22 At4g02750 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 2 16 23 At4g02810 expressed protein 8 2 16 24 At4g02980 auxin-binding protein 1 (ABP1) identical to Auxin-binding protein 1 precursor (ABP) (Swiss-Prot:P33487) [Arabidopsis thaliana] 8 2 16 25 At4g03040 hypothetical protein 8 2 17 1 At4g07523 hypothetical protein 8 2 17 2 At4g07670 protease-associated (PA) domain-containing protein similar to PF02225: PA domain; similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (SP:Q9Y3Q) {Homo sapiens};similar to Glutamate carboxypeptidase II (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase)(Folylpoly-gamma-glutamate carboxypeptidase) (FGCP) (Folate hydrolase 1) (Prostate-specific membrane antigen homolog) (SP|O77564) {Sus scrofa} 8 2 17 3 At4g08040 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthase from Malus sylvestris [SP|P37821], Solanum tuberosum [GI:520914]" 8 2 17 4 At4g08130 hypothetical protein 8 2 17 5 At4g08280 "expressed protein hypothetical protein ssr1391 - Synechocystis sp. (strain PCC 6803),PIR2:S75571" 8 2 17 6 At4g08320 "tetratricopeptide repeat (TPR)-containing protein glutamine-rich tetratricopeptide repeat (TPR) containing protein (SGT) - Rattus norvegicus,PID:e1285298 (SP|O70593); contains Pfam profile PF00515 TPR Domain" 8 2 17 7 At4g08500 "mitogen-activated protein kinase kinase, putative similar to mitogen-activated protein kinase MEKK1 GP|1255448 [Arabidopsis thaliana]" 8 2 17 8 At4g08555 expressed protein 8 2 17 9 At4g11380 "beta-adaptin, putative strong similarity to SP|Q10567 Adapter-related protein complex 1 beta 1 subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin [Drosophila melanogaster] GI:434902; contains Pfam profile: PF01602 Adaptin N terminal region" 8 2 17 10 At4g11430 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to hydroxyproline-rich glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765" 8 2 17 11 At4g11640 "serine racemase, putative similar to serine racemase [Mus musculus] GI:6448865; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 8 2 17 12 At4g11690 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 2 17 13 At4g11850 phospholipase D gamma 1 / PLD gamma 1 (PLDGAMMA1) identical to phospholipase D gamma 1 SP:Q9T053 from [Arabidopsis thaliana] 8 2 17 14 At4g11910 "expressed protein hypothetical protein F7H19.100 -Arabidopsis thaliana,PID:e1310060" 8 2 17 15 At4g12050 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 2 17 16 At4g12110 sterol desaturase family protein similar to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; contains Pfam profile PF01598: Sterol desaturase 8 2 17 17 At4g14680 sulfate adenylyltransferase 3 / ATP-sulfurylase 3 (APS3) identical to ATP sulfurylase (APS3) [Arabidopsis thaliana] GI:1575327 8 2 17 18 At4g14713 expressed protein 8 2 17 19 At4g14850 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 2 17 20 At4g14905 kelch repeat-containing F-box family protein contains Pfam PF01344: Kelch motif (2 copies) and PF00646: F-box domain; similar to putative SKP1 interacting partner 6 (GP:21689879) (SKIP6) {Arabidopsis thaliana}|19798784|gb|AU230074.1|AU230074 8 2 17 21 At4g15040 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 8 2 17 22 At4g15075 hypothetical protein 8 2 17 23 At4g15230 "ABC transporter family protein similar to pleiotropic drug resistance like protein [Nicotiana tabacum] GI:20522008, PDR5-like ABC transporter [Spirodela polyrhiza] GI:1514643; contains Pfam profile PF00005: ABC transporter" 8 2 17 24 At4g15270 glucosyltransferase-related contains some similarity to glucosyltransferase GI:14349251 from [Nicotiana tabacum] 8 2 17 25 At4g17730 syntaxin 23 (SYP23) / PEP12-like protein identical to SP|O04378 Syntaxin 23 (AtSYP23) (AtPLP) (AtPEP12-like protein) {Arabidopsis thaliana} 8 2 18 1 At4g17785 myb family transcription factor (MYB39) contains Pfam profile: PF00249 myb-like DNA-binding domain 8 2 18 2 At4g17960 expressed protein 8 2 18 3 At4g18010 inositol polyphosphate 5-phosphatase II (IP5PII) nearly identical to inositol polyphosphate 5-phosphatase II [Arabidopsis thaliana] GI:10444263 isoform contains an AT-acceptor splice site at intron 6 8 2 18 4 At4g18160 "outward rectifying potassium channel, putative (KCO6) similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 8 2 18 5 At4g18220 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 8 2 18 6 At4g18370 "protease HhoA, chloroplast (SPPA) (HHOA) identical to SP|Q9SEL7 Protease HhoA, chloroplast precursor (EC 3.4.21.-) {Arabidopsis thaliana}" 8 2 18 7 At4g18390 "TCP family transcription factor, putative similar to TFPD (GI:6681577) [Arabidopsis thaliana]; teosinte branched1 protein - Zea mays, PIR2:T04347" 8 2 18 8 At4g21180 "DNAJ heat shock N-terminal domain-containing protein / sec63 domain-containing protein similar to SP|Q9UGP8 Translocation protein SEC63 homolog {Homo sapiens}; contains Pfam profiles PF00226 DnaJ domain, PF02889 Sec63 domain" 8 2 18 9 At4g21215 expressed protein 8 2 18 10 At4g21380 "S-locus protein kinase, putative (ARK3) identical to PIR|T05180|T05180 S-receptor kinase ARK3 precursor - [Arabidopsis thaliana]" 8 2 18 11 At4g21445 expressed protein 8 2 18 12 At4g21580 "oxidoreductase, zinc-binding dehydrogenase family protein Pig3 Homo sapiens, PID:G2754812; contains Pfam zinc-binding dehydrogenase domain PF00107" 8 2 18 13 At4g21630 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 8 2 18 14 At4g21810 Der1-like family protein / degradation in the ER-like family protein contains Pfam profile: PF04511 Der1-like family 8 2 18 15 At4g21850 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 8 2 18 16 At4g24410 expressed protein 8 2 18 17 At4g24450 starch excess protein-related similar to SEX1 [Arabidopsis thaliana] GI:12044358 8 2 18 18 At4g24590 expressed protein 8 2 18 19 At4g24650 adenylate isopentenyltransferase 4 / cytokinin synthase (IPT4) identical to adenylate isopentenyltransferase (IPT4) [Arabidopsis thaliana] GI:14279062 8 2 18 20 At4g24790 expressed protein ; expression supported by MPSS 8 2 18 21 At4g24840 expressed protein 8 2 18 22 At4g25020 "KOW domain-containing protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF00467: KOW motif" 8 2 18 23 At4g25080 "magnesium-protoporphyrin O-methyltransferase, putative / magnesium-protoporphyrin IX methyltransferase, putative similar to SP|Q55467 Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase) {Synechocystis sp.}" 8 2 18 24 At4g27650 pelota (PEL1) identical to pelota [Arabidopsis thaliana] GI:3941543; contains InterPro accession IPR004403: Peptide chain release factor eRF/aRF subunit 1 8 2 18 25 At4g27680 "MSP1 protein, putative / intramitochondrial sorting protein, putative similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) [Saccharomyces cerevisiae]; contains Pfam domain, PF00004: ATPase, AAA family" 8 2 19 1 At4g27840 expressed protein 8 2 19 2 At4g27900 expressed protein 8 2 19 3 At4g28040 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 8 2 19 4 At4g28088 "hydrophobic protein, putative / low temperature and salt responsive protein, putative similar to Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) GI:15214251" 8 2 19 5 At4g28250 "beta-expansin, putative (EXPB3) similar to soybean pollen allergen (cim1) protein - soybean, PIR2:S48032; beta-expansin gene family, PMID:11641069" 8 2 19 6 At4g28300 hydroxyproline-rich glycoprotein family protein 8 2 19 7 At4g30920 "cytosol aminopeptidase family protein contains Pfam profiles: PF00883 cytosol aminopeptidase family catalytic domain, PF02789: cytosol aminopeptidase family N-terminal domain" 8 2 19 8 At4g30970 hypothetical protein 8 2 19 9 At4g31090 expressed protein 8 2 19 10 At4g31120 Skb1 methyltransferase family protein contains Pfam profile: PF05185 Skb1 methyltransferase 8 2 19 11 At4g31300 20S proteasome beta subunit A (PBA1) (PRCD) identical to cDNA proteasome subunit prcd GI:2511593 8 2 19 12 At4g31360 expressed protein 8 2 19 13 At4g31520 SDA1 family protein contains Pfam profile PF05285: SDA1 8 2 19 14 At4g31550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 8 2 19 15 At4g34090 expressed protein 8 2 19 16 At4g34131 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 2 19 17 At4g34250 "fatty acid elongase, putative similar to fatty acid elongase 1 (Fae1), Arabidopsis thaliana, U29142 [GI:881615]" 8 2 19 18 At4g34280 "transducin family protein / WD-40 repeat family protein similar to TUPA (GI:11066216) [Emericella nidulans]; similar to damage-specific DNA binding protein 2, Homo sapiens ,PIR2:I38909; contains Pfam PF00400: WD domain, G-beta repeat (3 copies,1 weak)|19797453|gb|AU229277.1|AU229277" 8 2 19 19 At4g34440 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 8 2 19 20 At4g34490 cyclase-associated protein (cap1) identical to cyclase-associated protein (cap1) GI:3169136 from [Arabidopsis thaliana] 8 2 19 21 At4g34660 SH3 domain-containing protein 2 (SH3P2) nearly identical to SH3 domain-containing protein 2 [Arabidopsis thaliana] GI:16974678; contains Pfam profile PF00018: SH3 domain 8 2 19 22 At4g34720 vacuolar ATP synthase 16 kDa proteolipid subunit 1 / V-ATPase 16 kDa proteolipid subunit 1 (AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}; contains Pfam profile PF00137: ATP synthase subunit C 8 2 19 23 AT5G57480 PC-1 B05 8 2 19 24 3XSSC PC-1 B17 8 2 19 25 AT1G29930 PC-1 F05 8 2 20 1 3XSSC PC-1 F17 8 2 20 2 AT3G44150 PC-1 J05 8 2 20 3 3XSSC PC-1 J17 8 2 20 4 AT4G00810 PC-1 N05 8 2 20 5 3XSSC PC-1 N17 8 2 20 6 At4g37340 cytochrome P450 family protein Similar to Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana]; 8 2 20 7 At4g37410 "cytochrome P450, putative similar to cytochrome p450 SP:O65790 from [Arabidopsis thaliana]" 8 2 20 8 At4g37580 "N-acetyltransferase, putative / hookless1 (HLS1) contains Pfam profile PF00583: acetyltransferase, GNAT family; identical to cDNA putative N-acetyltransferase hookless1 (HLS1) GI:1277089" 8 2 20 9 At4g37650 short-root transcription factor (SHR) 8 2 20 10 At4g37800 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to N-terminal partial sequence of endo-xyloglucan transferase GI:2244732 from [Gossypium hirsutum]" 8 2 20 11 At4g37860 hypothetical protein 8 2 20 12 At4g38050 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 8 2 20 13 At4g38090 expressed protein contains Pfam PF01205: Uncharacterized protein family UPF0029 8 2 20 14 At5g01490 "cation exchanger, putative (CAX4) identical to cation/proton antiporter [Arabidopsis thaliana] gi|15426028|gb|AAK97656; similar to high affinity calcium antiporter CAX1 [Arabidopsis thaliana] gi|9256741|gb|AAB05913; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 8 2 20 15 At5g01530 chlorophyll A-B binding protein CP29 (LHCB4) identical to CP29 [Arabidopsis thaliana] GI:298036; contains Pfam profile: PF00504 chlorophyll A-B binding protein 8 2 20 16 At5g01680 "cation/hydrogen exchanger, putative (CHX26) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 8 2 20 17 At5g01740 "expressed protein wound-inducible protein wun1 protein - Solanum tuberosum, PIR:JQ0398" 8 2 20 18 At5g01900 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA binding domain 8 2 20 19 At5g01960 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 2 20 20 At5g02100 oxysterol-binding family protein similar to SWH1 [Saccharomyces cerevisiae] GI:402658; contains Pfam profile PF01237: Oxysterol-binding protein 8 2 20 21 At5g02160 expressed protein 8 2 20 22 At5g04920 vacuolar protein sorting 36 family protein / VPS36 family protein contains Pfam PF04132: Vacuolar protein sorting 36 8 2 20 23 At5g04960 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 8 2 20 24 At5g05110 "cysteine protease inhibitor, putative / cystatin, putative similar to cysteine proteinase inhibitor [Glycine max] GI:1944342; contains Pfam profile PF00031: Cystatin domain" 8 2 20 25 At5g05170 "cellulose synthase, catalytic subunit (Ath-B) nearly identical to gi:2827143, cellulose synthase, catalytic subunit (Ath-B)" 8 2 21 1 At5g05320 "monooxygenase, putative (MO3) similar to GI:3426064; identical to cDNA monooxygenase 3, partial GI:3426065" 8 2 21 2 At5g05360 expressed protein similar to unknown protein (pir||T02500) 8 2 21 3 At5g05530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 2 21 4 At5g05570 "transducin family protein / WD-40 repeat family protein similar to unknown protein (pir||T04661); contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 2 weak)|8683726|gb|AV524198.1|AV524198" 8 2 21 5 At5g08210 expressed protein 8 2 21 6 At5g08270 expressed protein 8 2 21 7 At5g08415 "lipoic acid synthase family protein similar to lipoic acid synthase from Arabidopsis thaliana [gi:3928758], from Mus musculus [gi:14669826] Pfam profile PF04055: radical SAM domain protein" 8 2 21 8 At5g08470 "peroxisome biogenesis protein (PEX1) identical to peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains Pfam profile PF00004: ATPase, AAA family; identical to cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA, partial cds GI:12006271" 8 2 21 9 At5g08590 "serine/threonine protein kinase (ASK2) identical to serine/threonine-protein kinase ASK2, SWISS-PROT: P43292; contains protein kinase domain, Pfam:PF00069" 8 2 21 10 At5g08650 "GTP-binding protein LepA, putative " 8 2 21 11 At5g09240 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 8 2 21 12 At5g09270 expressed protein 8 2 21 13 At5g12010 expressed protein 8 2 21 14 At5g12050 expressed protein 8 2 21 15 At5g12230 expressed protein 8 2 21 16 At5g12280 hypothetical protein 8 2 21 17 At5g12430 "DNAJ heat shock N-terminal domain-containing protein similarity to TETRATRICOPEPTIDE REPEAT PROTEIN 2 , human, SWISSPROT:TTC2_HUMAN; contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 8 2 21 18 At5g12840 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 8 2 21 19 At5g13010 "RNA helicase, putative similar to DEAH-box RNA helicase [Chlamydomonas reinhardtii] GI:12044832; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 8 2 21 20 At5g13080 "WRKY family transcription factor WRKY DNA binding protein - Solanum tuberosum, EMBL:AJ278507" 8 2 21 21 At5g15820 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 2 21 22 At5g15860 expressed protein 8 2 21 23 At5g16040 regulator of chromosome condensation (RCC1) family protein similar to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 8 2 21 24 At5g16100 hypothetical protein 8 2 21 25 At5g16280 expressed protein 8 2 22 1 At5g16300 expressed protein 8 2 22 2 At5g16460 hypothetical protein similar to unknown protein (pir||T02326) 8 2 22 3 At5g16520 expressed protein 8 2 22 4 At5g19090 "heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3" 8 2 22 5 At5g19140 "auxin/aluminum-responsive protein, putative strong similarity to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 8 2 22 6 At5g19300 "expressed protein contains Pfam profile PF02598: Uncharacterized ACR, COG2106" 8 2 22 7 At5g19340 expressed protein 8 2 22 8 At5g19500 tryptophan/tyrosine permease family protein contains Pfam profile PF03222: Tryptophan/tyrosine permease family 8 2 22 9 At5g19560 hypothetical protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 8 2 22 10 At5g19740 "peptidase M28 family protein ileal peptidase I100 - Rattus norvegicus, EMBL:AF009921; contains Pfam profiles PF04389: Peptidase family M28, PF02225: PA domain" 8 2 22 11 At5g19800 "hydroxyproline-rich glycoprotein family protein similar to extensin [Catharanthus roseus] gi|1486263|dbj|BAA13175; contains proline-rich extensin domains, INTERPRO:IPR002965" 8 2 22 12 At5g23120 "photosystem II stability/assembly factor, chloroplast (HCF136) identical to SP|O82660 Photosystem II stability/assembly factor HCF136, chloroplast precursor {Arabidopsis thaliana}" 8 2 22 13 At5g23180 hypothetical protein 8 2 22 14 At5g23320 isoprenylcysteine carboxyl methyltransferase family protein / ICMT family protein similar to SP|O12947 Protein-S isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Isoprenylcysteine carboxylmethyltransferase) (Farnesyl cysteine carboxyl methyltransferase) (FCMT) {Xenopus laevis}; contains Pfam profile PF04140: Isoprenylcysteine carboxyl methyltransferase (ICMT) family 8 2 22 15 At5g23380 expressed protein 8 2 22 16 At5g23510 expressed protein 8 2 22 17 At5g23570 "XS domain-containing protein / XS zinc finger domain-containing protein-related contains Pfam profiles PF03468: XS domain, weak hit to PF03470: XS zinc finger domain" 8 2 22 18 At5g23750 "remorin family protein contains Pfam domain, PF03766: Remorin, N-terminal region; contains Pfam domain, PF03763: Remorin, C-terminal region" 8 2 22 19 At5g23790 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]; contains Pfam profile: PF01501 glycosyl transferase family 8" 8 2 22 20 At5g26700 "germin-like protein, putative similar to germin-like protein GLP8 [SP|P93000]; contains Pfam profile: PF01072 germin family" 8 2 22 21 At5g26660 "myb family transcription factor (MYB4) (MYB86) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB86) mRNA, partial cds GI:3941517" 8 2 22 22 At5g26780 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative strong similarity to SP|P50433 Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) {Solanum tuberosum}; contains Pfam profile PF00464: serine hydroxymethyltransferase" 8 2 22 23 At5g26830 "threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) identical to SP|O04630 Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Arabidopsis thaliana}" 8 2 22 24 At5g27010 hypothetical protein 8 2 22 25 At5g27080 WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595) {Xenopus laevis}; 8 2 23 1 At5g27280 zinc finger (DNL type) family protein contains Pfam profile PF05180: DNL zinc finger 8 2 23 2 At5g27340 hypothetical protein 8 2 23 3 At5g35380 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 2 23 4 At5g35460 expressed protein 8 2 23 5 At5g35610 paired amphipathic helix repeat-containing protein weak similarity to SP|P22579 Paired amphipathic helix protein {Saccharomyces cerevisiae}; contains Pfam profile PF02671: Paired amphipathic helix repeat 8 2 23 6 At5g35646 hypothetical protein 8 2 23 7 At5g35770 sterile apetala (SAP) identical to sterile apetala (GI:9758652) [Arabidopsis thaliana]. 8 2 23 8 At5g35830 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 8 2 23 9 At5g36000 expressed protein strong similarity to unknown protein (emb|CAB71103.1) 8 2 23 10 At5g36050 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 8 2 23 11 At5g39260 "expansin, putative (EXP21) similar to alpha-expansin GI:6573157 from [Regnellidium diphyllum]; alpha-expansin gene family, PMID:11641069" 8 2 23 12 At5g39320 "UDP-glucose 6-dehydrogenase, putative very strong similarity to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain" 8 2 23 13 At5g39500 "pattern formation protein, putative similar to SP|Q42510 Pattern formation protein EMB30 {Arabidopsis thaliana}; contains Pfam profile PF01369: Sec7 domain" 8 2 23 14 At5g39560 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif 8 2 23 15 At5g39740 "60S ribosomal protein L5 (RPL5B) ribosomal protein L5, rice" 8 2 23 16 At5g39800 "60S ribosomal protein-related contains weak similarity to 60S ribosomal protein L27, mitochondrial precursor (YmL27) (Swiss-Prot:P36526) [Saccharomyces cerevisiae]" 8 2 23 17 At5g39960 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 8 2 23 18 At5g40020 "pathogenesis-related thaumatin family protein similar to SP|P50699 Thaumatin-like protein precursor {Arabidopsis thaliana}, pathogenesis-related group 5 protein [Brassica rapa] GI:2749943; contains Pfam profile PF00314: Thaumatin family" 8 2 23 19 At5g42810 expressed protein similar to unknown protein (pir||T26506) 8 2 23 20 At5g42840 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 2 23 21 At5g42955 expressed protein 8 2 23 22 At5g42990 ubiquitin-conjugating enzyme 18 (UBC18) E2; identical to gi:2801448 8 2 23 23 At5g43170 zinc finger (C2H2 type) protein 3 (AZF3) identical to Cys2/His2-type zinc finger protein 3 [Arabidopsis thaliana] gi|6009889|dbj|BAA85109 8 2 23 24 At5g43210 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 8 2 23 25 At5g43380 serine/threonine protein phosphatase PP1 isozyme 7 (TOPP7) identical to SP|O82733 Serine/threonine protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) {Arabidopsis thaliana} 8 2 24 1 At5g43430 "electron transfer flavoprotein beta subunit family protein contains Pfam profile: PF01012 electron transfer flavoprotein, beta subunit" 8 2 24 2 At5g46020 expressed protein 8 2 24 3 At5g46070 "guanylate-binding family protein contains Pfam domains PF02263: Guanylate-binding protein, N-terminal domain and PF02841: Guanylate-binding protein, C-terminal domain" 8 2 24 4 At5g46180 "ornithine aminotransferase, putative / ornithine--oxo-acid aminotransferase, putative similar to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13) (Ornithine--oxo-acid aminotransferase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00202: aminotransferase, class III" 8 2 24 5 At5g46240 "inward rectifying potassium channel (KAT1) identical to K+ channel [Arabidopsis thaliana] gi|1165000|emb|CAA63601; Shaker-type channel (1P/6TM), PMID:11500563" 8 2 24 6 At5g46390 "peptidase S41 family protein similar to C-terminal peptidase of the D1 protein [Hordeum vulgare subsp vulgare] GI:1296805; contains Pfam profiles PF03572: Peptidase family S41B, PF00595: PDZ domain (Also known as DHR or GLGF)" 8 2 24 7 At5g46430 60S ribosomal protein L32 (RPL32B) 8 2 24 8 At5g46600 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005; expression supported by MPSS 8 2 24 9 At5g46640 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 8 2 24 10 At5g49260 hypothetical protein 8 2 24 11 At5g49320 expressed protein 8 2 24 12 At5g49490 MADS-box family protein contains similarity to MADS-box protein 8 2 24 13 At5g49540 expressed protein contains Pfam profile PF05646: Protein of unknown function (DUF786) 8 2 24 14 At5g49680 "cell expansion protein, putative similar to SABRE [Arabidopsis thaliana] GI:719291" 8 2 24 15 At5g49720 "endo-1,4-beta-glucanase KORRIGAN (KOR) / cellulase (OR16pep) identical to endo-1,4-beta-D-glucanase KORRIGAN [Arabidopsis thaliana] GI:3978258; similar to endo-1,4-beta-D-glucanase; cellulase GI:5689613 from [Brassica napus]; identical to cDNA cellulase (OR16pep) GI:1022806" 8 2 24 16 At5g49900 "expressed protein contains Pfam domain PF04685: Protein of unknown function, DUF608" 8 2 24 17 At5g49950 embryogenesis-associated protein-related contains weak similarity to Embryogenesis-associated protein EMB8 (Swiss-Prot:Q40863) [Picea glauca] 8 2 24 18 At5g52690 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 8 2 24 19 At5g52750 heavy-metal-associated domain-containing protein Pfam profile PF00403: Heavy-metal-associated domain 8 2 24 20 At5g52930 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295); expression supported by MPSS 8 2 24 21 At5g52975 expressed protein 8 2 24 22 At5g53120 "spermidine synthase, putative / putrescine aminopropyltransferase, putative similar to SP|O82147 Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY) {Coffea arabica}; contains Pfam profile PF01564: Spermine/spermidine synthase" 8 2 24 23 At5g53170 "FtsH protease, putative similar to ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus musculus]" 8 2 24 24 At5g53350 ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) identical to CLP protease regulatory subunit CLPX GI:2674203 from [Arabidopsis thaliana] 8 2 24 25 At5g53410 hypothetical protein similar to unknown protein (gb AAC73044.1) 8 2 25 1 At5g56075 hypothetical protein 8 2 25 2 At5g56130 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to beta transducin-like protein HET-E2C*4 (GI:17225206) [Podospora anserina] 8 2 25 3 At5g56290 peroxisomal targeting signal type 1 receptor (PEX5) identical to GI:3603353; contains Pfam profile PF00515 TPR Domain 8 2 25 4 At5g56340 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 2 25 5 At5g56510 pumilio/Puf RNA-binding domain-containing protein contains similarity to RNA-binding protein 8 2 25 6 At5g56570 hypothetical protein similar to unknown protein (pir |T06019) 8 2 25 7 At5g56750 Ndr family protein similar to SP|O23969 Pollen specific protein SF21 {Helianthus annuus}; contains Pfam profile PF03096: Ndr family 8 2 25 8 At5g56810 F-box family protein contains F-box domain Pfam:PF00646 8 2 25 9 At5g59340 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana] 8 2 25 10 At5g59400 "expressed protein predicted protein, Arabidopsis thaliana" 8 2 25 11 At5g59530 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); 1-aminocyclopropane-1-carboxylate oxidase kidney bean, PIR:T10818" 8 2 25 12 At5g59590 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 2 25 13 At5g59780 myb family transcription factor (MYB59) contains PFAM profile: myb DNA binding domain PF00249 8 2 25 14 At5g59830 expressed protein 8 2 25 15 At5g59950 "RNA and export factor-binding protein, putative " 8 2 25 16 At5g59990 expressed protein ; expression supported by MPSS 8 2 25 17 At5g62680 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 8 2 25 18 At5g62720 "integral membrane HPP family protein contains Pfam domain, PF04982: HPP family" 8 2 25 19 At5g62890 "permease, putative similar to permease 1 [Zea mays] GI:7844006; contains Pfam profile: PF00860 Xanthine/uracil permeases family; identical to cDNA putative permease 1 (MQB2.21) GI:21326024" 8 2 25 20 At5g62940 "Dof-type zinc finger domain-containing protein Dof zinc finger protein, Oryza sativa, EMBL:AB028129" 8 2 25 21 At5g63090 "LOB domain protein / lateral organ boundaries protein (LOB) identical to LOBa [Arabidopsis thaliana] GI:17484100, SP|Q9FML4 LATERAL ORGAN BOUNDARIES protein {Arabidopsis thaliana}" 8 2 25 22 At5g63120 "ethylene-responsive DEAD box RNA helicase, putative (RH30) strong similarity to ethylene-responsive RNA helicase [Lycopersicon esculentum] GI:5669638; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 8 2 25 23 At5g63300 ribosomal protein S21 family protein 8 2 25 24 At5g63370 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 2 25 25 At5g65920 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 8 2 26 1 At5g65970 "seven transmembrane MLO family protein / MLO-like protein 10 (MLO10) identical to membrane protein Mlo10 [Arabidopsis thaliana] gi|14091590|gb|AAK53803; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 8 2 26 2 At5g66052 expressed protein 8 2 26 3 At5g66080 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 8 2 26 4 At5g66240 "transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak); similar to Will die slowly protein. {Drosophila melanogaster} (SP:Q9V3J8) {Drosophila melanogaster}" 8 2 26 5 At5g66250 kinectin-related contains weak similarity to kinectin (GI:3766232) [Vulpes vulpes] 8 2 26 6 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) identical to SP|Q9FJZ9 Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a) {Arabidopsis thaliana} 8 2 26 7 At5g66450 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 8 2 26 8 3xSSC 3xSSC 8 2 26 9 3xSSC 3xSSC 8 2 26 10 3xSSC 3xSSC 8 2 26 11 3xSSC 3xSSC 8 2 26 12 3xSSC 3xSSC 8 2 26 13 3xSSC 3xSSC 8 2 26 14 3xSSC 3xSSC 8 2 26 15 3xSSC 3xSSC 8 2 26 16 At3g45580 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature" 8 2 26 17 At3g45640 "mitogen-activated protein kinase, putative / MAPK, putative (MPK3) identical to mitogen-activated protein kinase homolog (AtMPK3)[Arabidopsis thaliana] SWISS-PROT:Q39023; PMID:12119167" 8 2 26 18 At3g45800 hypothetical protein 8 2 26 19 At3g45860 "receptor-like protein kinase, putative similar to receptor-like protein kinase 4 (gi:13506745), 5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis thaliana; contains Pfam protein kinase domain PF00069" 8 2 26 20 At3g46040 "40S ribosomal protein S15A (RPS15aD) cytoplasmic ribosomal protein S15a, Arabidopsis thaliana, EMBL:ATAF1412" 8 2 26 21 At3g46100 histidyl-tRNA synthetase / histidine--tRNA ligase identical to histidyl-tRNA synthetase [Arabidopsis thaliana] GI:3659909 8 2 26 22 At3g46290 "protein kinase, putative similar to receptor-like protein kinase [Catharanthus roseus] gi|1644291|emb|CAA97692" 8 2 26 23 At3g46350 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 8 2 26 24 Blank Blank 8 2 26 25 Blank Blank 8 3 1 1 atc02 Randomly generated negative control 8 3 1 2 atc08 Randomly generated negative control 8 3 1 3 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 8 3 1 4 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 8 3 1 5 Alien4 Control: Stratagene Spotreport Alien Oligo 8 3 1 6 Alien10 Control: Stratagene Spotreport Alien Oligo 8 3 1 7 atc06 Randomly generated negative control 8 3 1 8 atc12 Randomly generated negative control 8 3 1 9 At1g01110 expressed protein contains Prosite PS00165: Serine/threonine dehydratases pyridoxal-phosphate attachment site 8 3 1 10 At1g01150 expressed protein ; expression supported by MPSS 8 3 1 11 At1g01340 "cyclic nucleotide-regulated ion channel (CNGC10) (ACBK1) almost identical to CaM-regulated potassium ion channel (ACBK1) GI:8515883 from [Arabidopsis thaliana]; contains Pfam domain, PF00520: Ion transport protein" 8 3 1 12 At1g01400 hypothetical protein 8 3 1 13 At1g01570 fringe-related protein + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 8 3 1 14 At1g01630 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative contains Pfam PF00650 : CRAL/TRIO domain and PF03765 : CRAL/TRIO, N-terminus; similar to polyphosphoinositide binding protein Ssh2p GB:AAB94599 GI:2739046 from [Glycine max]" 8 3 1 15 At1g01790 "K+ efflux antiporter, putative (KEA1) identical to GB:AAD01191 GI:4101473 from [ Arabidopsis thaliana]; Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563" 8 3 1 16 At1g01860 dimethyladenosine transferase (PFC1) identical to dimethyladenosine transferase GB:AAC09322 GI:3005590 from [Arabidopsis thaliana] 8 3 1 17 At1g04440 "casein kinase, putative similar to casein kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395; contains protein kinase domain, Pfam:PF00069" 8 3 1 18 At1g04500 zinc finger CONSTANS-related similar to Zinc finger protein constans-like 15 (SP:Q9FHH8) {Arabidopsis thaliana} 8 3 1 19 At1g04635 ribonuclease P family protein / Rpp14 family protein contains Pfam profile: PF01900 Rpp14 family 8 3 1 20 At1g04680 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 8 3 1 21 At1g04870 protein arginine N-methyltransferase family protein similar to SP|Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens} 8 3 1 22 At1g04920 "sucrose-phosphate synthase, putative similar to GB:Y11795 from [Craterostigma plantagineum]" 8 3 1 23 At1g05065 "CLE20, putative CLAVATA3/ESR-Related 20 (CLE20)" 8 3 1 24 At1g05120 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P79051 DNA repair protein rhp16 (RAD16 homolog) {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 3 1 25 At1g07705 NOT2/NOT3/NOT5 family protein contains Pfam PF04153: NOT2 / NOT3 / NOT5 family; similar to Rga (GI:1658504) [Drosophila melanogaster] 8 3 2 1 At1g07745 DNA repair family protein contains similarity to Swiss-Prot:O75771 DNA repair protein RAD51 homolog 4 (R51H3) (TRAD) [Homo sapiens] 8 3 2 2 At1g07850 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 8 3 2 3 At1g07900 LOB domain protein 1 / lateral organ boundaries domain protein 1 (LBD1) identical to SP|Q9LQR0 LOB domain protein 1 {Arabidopsis thaliana} 8 3 2 4 At1g08030 expressed protein 8 3 2 5 At1g08070 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 2 6 At1g08210 "aspartyl protease family protein contains Pfam profile PF00026: Eukaryotic aspartyl protease; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) {Nicotiana tabacum}" 8 3 2 7 At1g08270 expressed protein low similarity to SP|P46467 SKD1 protein (Vacuolar sorting protein 4b) {Mus musculus} 8 3 2 8 At1g10830 sodium symporter-related contains five transmembrane domains; Interpro IPR001991 Sodium:dicarboxylate symporter; EST gb|F13926 comes from this gene 8 3 2 9 At1g10890 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 8 3 2 10 At1g11070 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 8 3 2 11 At1g11130 "leucine-rich repeat family protein / protein kinase family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to leucine-rich repeat transmembrane protein kinase 2 [Zea mays] gi|3360291|gb|AAC27895" 8 3 2 12 At1g11290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 2 13 At1g11350 "S-locus lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 8 3 2 14 At1g11480 eukaryotic translation initiation factor-related contains weak similarity to Swiss-Prot:P23588 eukaryotic translation initiation factor 4B (eIF-4B) [Homo sapiens] 8 3 2 15 At1g11540 expressed protein contains Pfam profile: PF01925 domain of unknown function DUF81 8 3 2 16 At1g14310 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 8 3 2 17 At1g14360 "UDP-galactose/UDP-glucose transporter, putative very similar to UDP-galactose/UDP-glucose transporter (GI:22651763) {Arabidopsis thaliana}" 8 3 2 18 At1g14520 oxygenase-related similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 8 3 2 19 At1g14570 "UBX domain-containing protein contains Pfam profiles PF00789: UBX domain, PF02809: Ubiquitin interaction motif" 8 3 2 20 At1g14710 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 8 3 2 21 At1g14770 expressed protein 8 3 2 22 At1g14900 "high-mobility-group protein / HMG-I/Y protein nearly identical to high-mobility-group protein HMG-I/Y protein [Arabidopsis thaliana] GI:1429211; contains Pfam profiles PF00538: linker histone H1 and H5 family, PF02178: AT hook motif" 8 3 2 23 At1g14960 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:20810] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 8 3 2 24 At1g17640 "RNA recognition motif (RRM)-containing protein similar to GB:L02953 from [Xenopus laevis] (Nucleic Acids Res. 21, 999-1006 (1993)); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 3 2 25 At1g17700 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 8 3 3 1 At1g17820 expressed protein 8 3 3 2 At1g17880 "nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative similar to SP|P20290 Transcription factor BTF3 (RNA polymerase B transcription factor 3) {Homo sapiens}; contains Pfam profile PF01849: NAC domain; identical to cDNA BTF3b-like factor GI:5912423" 8 3 3 3 At1g18060 expressed protein 8 3 3 4 At1g18140 laccase family protein / diphenol oxidase family protein similar to high-pI laccase (LAC2-1) GI:1621460 from [Liriodendron tulipifera] 8 3 3 5 At1g18320 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam domain PF02466: Mitochondrial import inner membrane translocase subunit Tim17 8 3 3 6 At1g18370 kinesin motor family protein (NACK1) similar to kinesin heavy chain isolog GB:AAB63609 GI:2262101 from [Arabidopsis thaliana] 8 3 3 7 At1g21250 wall-associated kinase 1 (WAK1) identical to wall-associated kinase 1 [Arabidopsis thaliana] GI:3549626; expressed in leaves and stems & induced by pathogen infection (PMID:10380805) 8 3 3 8 At1g21323 hypothetical protein 8 3 3 9 At1g21475 hypothetical protein 8 3 3 10 At1g21550 "calcium-binding protein, putative contains similarity to calcium-binding protein GB:CAB63264 GI:6580549 from [Lotus japonicus]" 8 3 3 11 At1g21710 8-oxoguanine-DNA glycosylase (OGG1) similar to SP|O15527 N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) {Homo sapiens}; contains Pfam profiles PF00633: Helix-hairpin-helix motif and PF00730: HhH-GPD superfamily base excision DNA repair protein; identical to cDNA 8-oxoguanine-DNA glycosylase (OGG1 gene) GI:16074116 8 3 3 12 At1g21750 "protein disulfide isomerase, putative similar to SP|P29828 Protein disulfide isomerase precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform contains non-consensus GA donor splice site at intron 9" 8 3 3 13 At1g21940 hypothetical protein 8 3 3 14 At1g22000 F-box family protein contains F-box domain Pfam:PF00646 8 3 3 15 At1g24570 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 8 3 3 16 At1g24620 "polcalcin, putative / calcium-binding pollen allergen, putative similar to polcalcin Jun o 2 (calcium-binding pollen allergen Jun o 2) SP:O64943 from [Juniperus oxycedrus]" 8 3 3 17 At1g25240 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 8 3 3 18 At1g25280 F-box family protein / tubby family protein similar to Tubby protein homolog (SP:O88808) [Rattus norvegicus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family; 8 3 3 19 At1g25420 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 8 3 3 20 At1g25490 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit A (RCN1) identical to phosphoprotein phosphatase 2A, regulatory subunit A GI:1262171 from [Arabidopsis thaliana]" 8 3 3 21 At1g26130 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 8 3 3 22 At1g26190 phosphoribulokinase/uridine kinase family protein weak similarity to SP|Q59190 Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase) (Cytidine monophosphokinase) {Borrelia burgdorferi}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family 8 3 3 23 At1g29070 ribosomal protein L34 family protein similar to plastid ribosomal protein L34 precursor GB:AAF64157 GI:7578860 from [Spinacia oleracea] 8 3 3 24 At1g29140 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 8 3 3 25 At1g29330 ER lumen protein retaining receptor (ERD2) / HDEL receptor identical to SP:P35402 ER lumen protein retaining receptor (HDEL receptor) {Arabidopsis thaliana} 8 3 4 1 At1g29390 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 8 3 4 2 At1g29530 expressed protein 8 3 4 3 At1g29590 "eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative similar to SP|O23252 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F P26 subunit) {Arabidopsis thaliana}; contains Pfam profile PF01652: Eukaryotic initiation factor 4E" 8 3 4 4 At1g29780 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 8 3 4 5 At1g29840 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 8 3 4 6 At1g32690 expressed protein similar to hypothetical protein GB:AAC61817 GI:3668085 from [Arabidopsis thaliana] 8 3 4 7 At1g32730 expressed protein 8 3 4 8 At1g32930 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 3 4 9 At1g32980 subtilisin-like serine protease-related similar to subtilase SP1 [Oryza sativa] GI:9957714 8 3 4 10 At1g33135 hypothetical protein 8 3 4 11 At1g33250 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 8 3 4 12 At1g33430 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 3 4 13 At1g33490 expressed protein 8 3 4 14 At1g42970 "glyceraldehyde-3-phosphate dehydrogenase B, chloroplast (GAPB) / NADP-dependent glyceraldehydephosphate dehydrogenase subunit B identical to SP|P25857 Glyceraldehyde 3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) {Arabidopsis thaliana}" 8 3 4 15 At1g43040 "auxin-responsive protein, putative similar to auxin-induced protein (SP:P33079) (GI:416693) [Glycine max]" 8 3 4 16 At1g43580 expressed protein 8 3 4 17 At1g43640 "F-box family protein / tubby family protein contains Pfam profile: PF01167: Tub family; contains Pfam PF00646: F-box domain; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein Length(GI:6730158) [Mus musculus]; similar to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:O00294) [Homo sapiens]; similar to phosphodiesterase (GI:467578) [Mus musculus]" 8 3 4 18 At1g43790 expressed protein 8 3 4 19 At1g43880 "hypothetical protein low similarity to protective antigen [Streptococcus pyogenes] GI:8996050, fibrinogen-binding protein [Streptococcus equi] GI:3093478" 8 3 4 20 At1g44100 "amino acid permease 5, putative (AAP5) nearly identical to amino acid permease (AAP5) GI:608673 from [Arabidopsis thaliana]" 8 3 4 21 At1g44170 "aldehyde dehydrogenase, putative (ALDH) similar to aldehyde dehydrogenase ALDH [Craterostigma plantagineum] gi|17065918|emb|CAC84900" 8 3 4 22 At1g49240 "actin 8 (ACT8) identical to SP|Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and to At3g18780" 8 3 4 23 At1g49300 "Ras-related GTP-binding protein, putative contains Pfam profile: PF00071 Ras family" 8 3 4 24 At1g49490 "leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 8 3 4 25 At1g49560 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 8 3 5 1 At1g49730 protein kinase family protein contains Pfam PF00069: Protein kinase domain; similar to AtPK2324 (GI:1785621) [Arabidopsis thaliana]; similar to receptor-like protein kinase (GI:1644291) [Catharanthus roseus]; similar to somatic embryogenesis receptor-like kinase (GI:2224911) [Daucus carota] 8 3 5 2 At1g49790 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 8 3 5 3 At1g49950 "DNA-binding protein, putative contains similarity to DNA-binding protein PcMYB1 [Petroselinum crispum] gi|2224899|gb|AAB61699" 8 3 5 4 At1g49990 expressed protein ; expression supported by MPSS 8 3 5 5 At1g52870 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:Q07066 22 kDa peroxisomal membrane protein [Rattus norvegicus] 8 3 5 6 At1g52905 expressed protein 8 3 5 7 At1g53070 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 8 3 5 8 At1g53130 "stigma-specific Stig1 family protein similar to stigma-specific protein STIG1 [Nicotiana tabacum] GI:496647; contains Pfam profile PF04885: Stigma-specific protein, Stig1" 8 3 5 9 At1g53285 expressed protein 8 3 5 10 At1g53330 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 5 11 At1g53490 bZIP protein 8 3 5 12 At1g53550 F-box family protein similar to F-box family protein TIGR_Ath1:At3g23960 8 3 5 13 At1g56145 "leucine-rich repeat family protein / protein kinase family protein contains Pfam profiles: PF00069: Eukaryotic protein kinase domain, multiple PF00560: Leucine Rich Repeat" 8 3 5 14 At1g56200 expressed protein 8 3 5 15 At1g56345 pseudouridine synthase family protein low similarity to SP|P23851 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 8 3 5 16 At1g56415 Expressed protein 8 3 5 17 At1g56610 "syntaxin-related family protein similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g44180, At3g58890, At1g48390, At3g59270 [Arabidopsis thaliana]; contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis" 8 3 5 18 At1g56680 glycoside hydrolase family 19 protein similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus] 8 3 5 19 At1g57620 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 8 3 5 20 At1g57690 F-box family protein contains F-box domain Pfam:PF00646 8 3 5 21 At1g61570 "mitochondrial import inner membrane translocase (TIM13) identical to mitochondrial import inner membrane translocase subunit Tim13 [Arabidopsis thaliana] Swiss-Prot:Q9XH48; contains Pfam domain, PF02953: Tim10/DDP family zinc finger" 8 3 5 22 At1g61630 "equilibrative nucleoside transporter, putative (ENT7) identical to putative equilibrative nucleoside transporter ENT7 [Arabidopsis thaliana] GI:16518989; contains similarity to SWISS-PROT:Q99808 equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter, Equilibrative NBMPR-sensitive nucleoside transporter, Nucleoside transporter, es-type) [Homo sapiens]; contains Pfam profile PF01733: Nucleoside transporter" 8 3 5 23 At1g61800 "glucose-6-phosphate/phosphate translocator, putative similar to glucose-6-phosphate/phosphate-translocator precursor GI:2997591 from [Pisum sativum]" 8 3 5 24 At1g61850 "patatin family protein similar to membrane-associated calcium-independent phospholipase A2 gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains Patatin domain PF01734, PF00514: Armadillo/beta-catenin-like repeat" 8 3 5 25 At1g62030 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 8 3 6 1 At1g62080 expressed protein 8 3 6 2 At1g62270 F-box family protein contains Pfam:PF00646 F-box domain 8 3 6 3 At1g62320 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 8 3 6 4 At1g65040 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 3 6 5 At1g65080 OXA1 family protein contains Pfam PF02096: 60Kd inner membrane protein; similar to AtOXA1 (GI:6624207) [Arabidopsis thaliana] 8 3 6 6 At1g65230 expressed protein 8 3 6 7 At1g65270 expressed protein 8 3 6 8 At1g65420 expressed protein contains Pfam profile PF04483: Protein of unknown function (DUF565) 8 3 6 9 At1g65480 flowering locus T protein (FT) identical to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 8 3 6 10 At1g65680 "beta-expansin, putative (EXBP2) similar to beta-expansin GI:8118428 from [Oryza sativa]; identical to SWISS-PROT:Q9SHY6 putative beta-expansin 2 precursor (At-EXPB2)[Arabidopsis thaliana]; beta-expansin gene family, PMID:11641069" 8 3 6 11 At1g65740 F-box family protein contains F-box domain Pfam:PF00646 8 3 6 12 At1g68480 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 8 3 6 13 At1g68530 "very-long-chain fatty acid condensing enzyme (CUT1) identical to very-long-chain fatty acid condensing enzyme (CUT1) GB:AF129511 (required for cuticular wax biosynthesis and pollen fertility: Millar,A.A., et al., Plant Cell (1999))" 8 3 6 14 At1g68670 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 8 3 6 15 At1g68730 zinc finger (DNL type) family protein contains Pfam profile PF05180: DNL zinc finger 8 3 6 16 At1g68890 "menaquinone biosynthesis protein-related similar to menaquinone biosynthesis protein menD [SP|P17109][E. coli] ; Pfam HMM hit: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase / 2-oxoglutarate decarboxylase" 8 3 6 17 At1g68930 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 3 6 18 At1g69100 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 8 3 6 19 At1g69190 "dihydropterin pyrophosphokinase, putative / dihydropteroate synthase, putative / DHPS, putative similar to dihydropterin pyrophosphokinase /dihydropteroate synthase [Pisum sativum] gi|1934972|emb|CAA69903" 8 3 6 20 At1g71900 expressed protein 8 3 6 21 At1g71960 ABC transporter family protein similar to breast cancer resistance protein GB:AAC97367 from [Homo sapiens] 8 3 6 22 At1g72120 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 8 3 6 23 At1g72170 expressed protein contains Pfam PF04418: Domain of unknown function (DUF543) 8 3 6 24 At1g72340 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family 8 3 6 25 At1g72410 COP1-interacting protein-related similar to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis thaliana] GI:3327870 8 3 7 1 At1g72570 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana];contains Pfam profile: PF00847 AP2 domain (2 copies); contains non-consensus TA acceptor splice site at exon 4" 8 3 7 2 At1g72630 expressed protein 8 3 7 3 AT5G57480 PC-1 C05 8 3 7 4 3XSSC PC-1 C17 8 3 7 5 AT1G29930 PC-1 G05 8 3 7 6 3XSSC PC-1 G17 8 3 7 7 AT3G44150 PC-1 K05 8 3 7 8 3XSSC PC-1 K17 8 3 7 9 AT4G00810 PC-1 O05 8 3 7 10 3XSSC PC-1 O17 8 3 7 11 At1g75400 expressed protein 8 3 7 12 At1g75460 ATP-dependent protease La (LON) domain-containing protein weak similarity to SP|P36774 ATP-dependent protease La 2 (EC 3.4.21.53) {Myxococcus xanthus}; contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 8 3 7 13 At1g75670 expressed protein similar to DNA-dependent RNA polymerase 19 kDa polypeptide (EC 2.7.7.6) (A43) (Swiss-Prot:O43036) [Schizosaccharomyces pombe] 8 3 7 14 At1g75730 expressed protein 8 3 7 15 At1g75900 family II extracellular lipase 3 (EXL3) EXL3 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 8 3 7 16 At1g75960 "AMP-binding protein, putative similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam profile: PF00501 AMP-binding enzyme; identical to cDNA adenosine monophosphate binding protein 8 AMPBP8 (AMPBP8) GI:20799724" 8 3 7 17 At1g76130 "alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative strong similarity to alpha-amylase GI:7532799 from [Malus x domestica];contains Pfam profile PF00128: Alpha amylase, catalytic domain" 8 3 7 18 At1g76185 expressed protein 8 3 7 19 At1g78810 expressed protein 8 3 7 20 At1g78860 curculin-like (mannose-binding) lectin family protein low similarity to Ser/Thr protein kinase [Zea mays] GI:2598067; contains Pfam profile PF01453: Lectin (probable mannose binding) 8 3 7 21 At1g78995 expressed protein 8 3 7 22 At1g79050 "DNA repair protein recA identical to DNA repair protein recA, chloroplast [Precursor] SP:Q39199 from [Arabidopsis thaliana] ;contains Pfam profile: PF00154 recA bacterial DNA recombination protein" 8 3 7 23 At1g79220 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 8 3 7 24 At1g79310 "latex-abundant protein, putative (AMC4) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain" 8 3 7 25 At1g79450 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:4966357; GI:4585976; GI:11994416; GI:9757735 from [Arabidopsis thaliana] 8 3 8 1 At1g79500 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA) identical to Swiss-Prot:Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase (EC 4.1.2.16) (Phospho-2- dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) [Arabidopsis thaliana] 8 3 8 2 At2g02090 "SNF2 domain-containing protein / helicase domain-containing protein similar to transcriptional activator SRCAP [Homo sapiens] GI:5106572; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 8 3 8 3 At2g02160 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 8 3 8 4 At2g02390 "glutathione S-transferase zeta 1 (GSTZ1) (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1) (Maleylacetone isomerase) (EC 5.2.1.-) (MAI) {Arabidopsis thaliana}; contains Pfam profiles PF02798: Glutathione S-transferase, N-terminal domain and PF00043:Glutathione S-transferase, C-terminal domain" 8 3 8 5 At2g02450 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain 8 3 8 6 At2g02640 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 3 8 7 At2g02710 PAC motif-containing protein similar to nonphototropic hypocotyl 1 [Zea mays] GI:2687358; contains Pfam profile PF00785: PAC motif 8 3 8 8 At2g02860 "sucrose transporter / sucrose-proton symporter (SUC3) identical to sucrose transporter [Arabidopsis thaliana] GI:8052190; similar to sucrose transporters from [Oryza sativa (japonica cultivar-group)] GI:2723471, [Zea mays] GI:5771354, [Triticum aestivum] GI:19548165; contains Pfam profile PF00083: major facilitator superfamily protein" 8 3 8 9 At2g02950 phytochrome kinase substrate 1 (PKS1) identical to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 [Arabidopsis thaliana] 8 3 8 10 At2g06480 hypothetical protein related to GB:AAD15331 8 3 8 11 At2g06570 hypothetical protein 8 3 8 12 At2g06960 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to ripening protein E8, Lycopersicon esculentum [PIR:S01642]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 8 3 8 13 At2g07070 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 8 3 8 14 At2g07340 "prefoldin-related KE2 family protein contains similarity to Swiss-Prot:O60925 prefoldin subunit 1 [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 8 3 8 15 At2g07560 "ATPase, plasma membrane-type, putative / proton pump, putative similar to P-type H(+)-transporting ATPase from [Phaseolus vulgaris] GI:758250, [Lycopersicon esculentum] GI:1621440, SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum tuberosum] GI:435001; contains InterPro accession IPR001757: ATPase, E1-E2 type" 8 3 8 16 At2g07681 "cytochrome c biogenesis protein, putative strong similarity to cytochrome c biogenesis protein [Pisum sativum] GI:4850219, ABC-type heme transporter subunit [Oryza sativa (japonica cultivar-group)] GI:1395188; contains Pfam profile PF01578: Cytochrome C assembly protein" 8 3 8 17 At2g07692 hypothetical protein 8 3 8 18 At2g15300 "leucine-rich repeat transmembrane protein kinase, putative " 8 3 8 19 At2g15345 expressed protein 8 3 8 20 At2g15520 "zinc finger protein, putative strong similarity to zinc finger protein [Arabidopsis thaliana] GI:976277" 8 3 8 21 At2g15580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 3 8 22 At2g15760 calmodulin-binding protein similar to AR781 GI:1669593 from [Arabidopsis thaliana]; AR781 complements pheromone receptor deficient mutant of Shizosaccharomyces pombe 8 3 8 23 At2g15820 "pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles PF01535: PPR repeat, PF03161 LAGLIDADG DNA endonuclease family" 8 3 8 24 At2g16060 non-symbiotic hemoglobin 1 (HB1) (GLB1) identical to SP|O24520 Non-symbiotic hemoglobin 1 (Hb1) (ARAth GLB1) {Arabidopsis thaliana} 8 3 8 25 At2g16130 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 8 3 9 1 At2g18940 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 8 3 9 2 At2g19000 expressed protein 8 3 9 3 At2g19200 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 8 3 9 4 At2g19270 expressed protein 8 3 9 5 At2g19460 expressed protein 8 3 9 6 At2g19520 WD-40 repeat protein (MSI4) contains 6 (4 significant) WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana] 8 3 9 7 At2g19660 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 3 9 8 At2g19720 40S ribosomal protein S15A (RPS15aB) 8 3 9 9 At2g22420 peroxidase 17 (PER17) (P17) identical to SP|Q9SJZ2 Peroxidase 17 precursor (EC 1.11.1.7) (Atperox P17) (ATP25a) {Arabidopsis thaliana} 8 3 9 10 At2g22470 arabinogalactan-protein (AGP2) identical to gi|3883122|gb|AAC77824; supported by cDNA gi|3883121|gb|AF082299 8 3 9 11 At2g22660 glycine-rich protein 8 3 9 12 At2g22720 expressed protein 8 3 9 13 At2g22890 expressed protein ; expression supported by MPSS 8 3 9 14 At2g22940 expressed protein ; expression supported by MPSS 8 3 9 15 At2g23080 "casein kinase II alpha chain, putative identical to probable casein kinase II, alpha chain [Arabidopsis thaliana] SWISS-PROT:O64817; similar to casein kinase II, alpha chain 1 [Arabidopsis thaliana] SWISS-PROT:Q08467" 8 3 9 16 At2g23100 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 3 9 17 At2g25990 hypothetical protein 8 3 9 18 At2g26030 F-box family protein contains F-box domain Pfam:PF00646 8 3 9 19 At2g26210 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 8 3 9 20 At2g26280 smr (Small MutS Related) domain-containing protein weak similarity to PRLI-interacting factor N [Arabidopsis thaliana] GI:11139276; contains Pfam profile PF01713: Smr domain 8 3 9 21 At2g26460 RED family protein similar to Red protein (RER protein) (Swiss-Prot:Q9Z1M8) [Mus musculus] 8 3 9 22 At2g26500 "cytochrome b6f complex subunit (petM), putative nearly identical to cytochrome b6f complex subunit (GI:3090403) [Arabidopsis thaliana]; alternative splice forms exist" 8 3 9 23 At2g26660 "SPX (SYG1/Pho81/XPR1) domain-containing protein low similarity to NUC-2 [Neurospora crassa] GI:1399532, xenotropic and polytropic murine leukemia virus receptor [Mus musculus castaneus] GI:6093320; contains Pfam profile PF03105: SPX domain" 8 3 9 24 At2g26710 "cytochrome P450, putative " 8 3 9 25 At2g29390 "sterol 4-alpha-methyl-oxidase 1 (SMO1) nearly identical to sterol 4-alpha-methyl-oxidase GI:16973469 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase (SMO) partial cds, GI:16973431" 8 3 10 1 At2g29420 "glutathione S-transferase, putative " 8 3 10 2 At2g29590 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 8 3 10 3 At2g29630 thiamine biosynthesis family protein / thiC family protein contains Pfam profile: PF01964 ThiC family 8 3 10 4 At2g29790 expressed protein 8 3 10 5 At2g29850 hypothetical protein 8 3 10 6 At2g29995 expressed protein 8 3 10 7 At2g30060 Ran-binding protein 1b (RanBP1b) nearly identical to atranbp1b [Arabidopsis thaliana] GI:2058284 8 3 10 8 At2g32680 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 8 3 10 9 At2g32720 "cytochrome b5, putative similar to Cytochrome B5 SP:P49098 from [Nicotiana tabacum]" 8 3 10 10 At2g32860 glycosyl hydrolase family 1 protein 8 3 10 11 At2g32910 expressed protein 8 3 10 12 At2g33090 expressed protein ; expression supported by MPSS 8 3 10 13 At2g33160 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Salix gilgiana] GI:6714524; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 8 3 10 14 At2g33310 auxin-responsive protein / indoleacetic acid-induced protein 13 (IAA13) identical to SP|Q38831 Auxin-responsive protein IAA13 (Indoleacetic acid-induced protein 13) {Arabidopsis thaliana} 8 3 10 15 At2g33340 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] 8 3 10 16 At2g35930 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 8 3 10 17 At2g35990 hypothetical protein contains Pfam profile PF03641: decarboxylase family protein 8 3 10 18 At2g36100 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 8 3 10 19 At2g36180 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 8 3 10 20 At2g36340 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 8 3 10 21 At2g36400 expressed protein nearly identical to transcription activator GRL3 [Arabidopsis thaliana] GI:21539884 (unpublished); supporting cDNA gi|21539883|gb|AY102636.1| 8 3 10 22 At2g36560 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 3 10 23 At2g36630 expressed protein contains Pfam profile: PF01925 domain of unknown function DUF81 8 3 10 24 At2g39190 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 8 3 10 25 At2g39250 "AP2 domain-containing transcription factor, putative AP2_ARATH Floral homeotic protein APETALA2.(SP:P47927){Arabidopsis thaliana}" 8 3 11 1 At2g39410 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 8 3 11 2 At2g39460 60S ribosomal protein L23A (RPL23aA) identical to GB:AF034694 8 3 11 3 At2g39650 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 8 3 11 4 At2g39705 expressed protein 8 3 11 5 At2g39805 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 8 3 11 6 At2g39855 expressed protein 8 3 11 7 At2g42330 D111/G-patch domain-containing protein similar to SP|Q9ERA6 Tuftelin-interacting protein 11 {Mus musculus}; contains Pfam profile PF01585: G-patch domain 8 3 11 8 At2g42380 bZIP transcription factor family protein 8 3 11 9 At2g42540 cold-responsive protein / cold-regulated protein (cor15a) identical to cold-regulated protein cor15a [Arabidopsis thaliana] GI:507149; contains Pfam profile PF02987: Late embryogenesis abundant protein 8 3 11 10 At2g42580 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 8 3 11 11 At2g42740 60S ribosomal protein L11 (RPL11A) 8 3 11 12 At2g42800 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; and grail" 8 3 11 13 At2g42955 hypothetical protein 8 3 11 14 At2g43010 phytochrome-interacting factor 4 (PIF4) / basic helix-loop-helix protein 9 (bHLH9) / short under red-light 2 (SRL2) identical to SP|Q8W2F3 Phytochrome-interacting factor 4 (Basic helix-loop-helix protein 9) (bHLH9) (Short under red-light 2) {Arabidopsis thaliana}; supporting cDNA gi|18026965|gb|AF251694.1|AF251694 8 3 11 15 At2g45680 "TCP family transcription factor, putative similar to PCF2 (GI:2580440) [Oryza sativa]" 8 3 11 16 At2g45740 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam profile PF05648: Peroxisomal biogenesis factor 11 (PEX11) 8 3 11 17 At2g45900 expressed protein 8 3 11 18 At2g45960 plasma membrane intrinsic protein 1B (PIP1B) / aquaporin PIP1.2 (PIP1.2) / transmembrane protein A (TMPA) identical to plasma membrane intrinsic protein 1B SP:Q06611 from [Arabidopsis thaliana] 8 3 11 19 At2g46130 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 8 3 11 20 At2g46170 reticulon family protein (RTNLB5) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon 8 3 11 21 At2g46310 "AP2 domain-containing transcription factor, putative " 8 3 11 22 At2g46340 phytochrome A supressor spa1 (SPA1) identical to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam PF00400) (1 weak) 8 3 11 23 At3g01700 arabinogalactan-protein (AGP11) identical to gi|10880499|gb|AAG24279 8 3 11 24 At3g01760 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter [Arabidopsis thaliana] GI:2576361; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 8 3 11 25 At3g01890 "SWIB complex BAF60b domain-containing protein similar to brahma associated protein 60 kDa [Drosophila melanogaster] GI:3378134, SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 [Homo sapiens] GI:4566530; contains Pfam profile PF02201: BAF60b domain of the SWIB complex" 8 3 12 1 At3g01940 expressed protein 8 3 12 2 At3g02090 "mitochondrial processing peptidase beta subunit, putative similar to mitochondrial processing peptidase beta subunit, mitochondrial precursor, Beta-MPP [Human] SWISS-PROT:O75439" 8 3 12 3 At3g02140 expressed protein 8 3 12 4 At3g02270 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein similar to SP|Q13144 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 8 3 12 5 At3g02310 "developmental protein SEPALLATA2 / floral homeotic protein (AGL4) (SEP2) identical to developmental protein SEPALLATA2 / floral homeotic protein AGL4 GB:P29384 [Arabidopsis thaliana], Pfam HMM hit: SRF-type transcription factors (DNA-binding and dimerization domain)" 8 3 12 6 At3g04950 hypothetical protein 8 3 12 7 At3g05000 "transport protein particle (TRAPP) component Bet3 family protein similar to Transport protein particle 33 kDa subunit (TRAPP 33 kDa subunit) (Swiss-Prot:Q99394) [Saccharomyces cerevisiae]; contains Pfam profile PF04051: Transport protein particle (TRAPP) component, Bet3" 8 3 12 8 At3g05160 "sugar transporter, putative similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 8 3 12 9 At3g05210 "nucleotide repair protein, putative similar to nucleotide repair protein [Lilium longiflorum] GI:3297891, SP|P07992 DNA excision repair protein ERCC-1 {Homo sapiens}; contains Pfam profile PF00633: Helix-hairpin-helix motif" 8 3 12 10 At3g05390 expressed protein ; expression supported by MPSS 8 3 12 11 At3g05450 hypothetical protein 8 3 12 12 At3g05580 "serine/threonine protein phosphatase, putative similar to serine/threonine protein phosphatase PP1 isozyme 8 SP:O82734 from [Arabidopsis thaliana]" 8 3 12 13 At3g05630 "phospholipase D, putative (PLDP2) identical to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4) (AtPLDp2) (Phospholipase D2 PHOX and PX containing domain) (Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis thaliana}; similar to phospholipase D GB:BAA24577 from [Rattus norvegicus]; contains Pfam profile: PF00614 phospholipase D, PF00169 PH domain, PF00787 PX domain" 8 3 12 14 At3g08510 phosphoinositide-specific phospholipase C (PLC2) identical to phosphoinositide specific phospholipase C(AtPLC2) GI:857374 [Arabidopsis thaliana] 8 3 12 15 At3g08580 "ADP, ATP carrier protein 1, mitochondrial / ADP/ATP translocase 1 / adenine nucleotide translocator 1 (ANT1) identical to SWISS-PROT:P31167 ADP,ATP carrier protein 1 (Adenine nucleotide translocator 1) [Arabidopsis thaliana]" 8 3 12 16 At3g08740 elongation factor P (EF-P) family protein similar to SP|P33398 Elongation factor P (EF-P) {Escherichia coli O157:H7}; contains Pfam profile PF01132: Elongation factor P (EF-P) 8 3 12 17 At3g08800 expressed protein 8 3 12 18 At3g08940 chlorophyll A-B binding protein (LHCB4.2) contains Pfam profile: PF00504 chlorophyll A-B binding protein; identical to Lhcb4.2 protein GB:AAD28774 [Arabidopsis thaliana] 8 3 12 19 At3g08980 signal peptidase I family protein similar to SP|P46972 Mitochondrial inner membrane protease subunit 2 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I 8 3 12 20 At3g09110 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 8 3 12 21 At3g09150 "phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) identical to SP|Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor (EC 1.3.7.4) (Phytochromobilin synthase) (PFB synthase) (PPhiB synthase) {Arabidopsis thaliana}; identical to cDNA for phytochromobilin synthase HY2 protein, GI:13359272" 8 3 12 22 At3g11660 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 (GI:1619321) [Nicotiana tabacum] 8 3 12 23 At3g11710 "lysyl-tRNA synthetase, putative / lysine--tRNA ligase, putative similar to SP|Q43776 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Lycopersicon esculentum}; contains Pfam profile PF00152: tRNA synthetases class II (D, K and N)" 8 3 12 24 At3g11860 expressed protein ; expression supported by MPSS 8 3 12 25 At3g11900 "amino acid transporter family protein low similarity to proton/amino acid transporter 1 [Mus musculus] GI:21908024; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 8 3 13 1 At3g12030 expressed protein similar to membrane protein GB:BAA86974 GI:6467175 from [Homo sapiens] 8 3 13 2 At3g12070 "geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative similar to geranylgeranyl transferase type II beta subunit SP:P53611 [GI:1552549] [Homo sapiens]" 8 3 13 3 At3g12210 expressed protein 8 3 13 4 At3g12250 bZIP family transcription factor contains Pfam profile:PF00170 bZIP transcription factor 8 3 13 5 At3g14700 expressed protein 8 3 13 6 At3g14750 expressed protein weak similarity to Septation ring formation regulator (Swiss-Prot:O34894) [Bacillus subtilis] 8 3 13 7 At3g14880 "DNA-binding protein-related low similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423, SP|O24160 TGACG-sequence specific DNA-binding protein TGA-2.1 {Nicotiana tabacum}" 8 3 13 8 At3g14920 expressed protein 8 3 13 9 At3g15060 Ras-related GTP-binding family protein similar to GTP-binding protein GI:303742 from [Pisum sativum]; contains Pfam profile: PF00071 ras family 8 3 13 10 At3g15115 expressed protein 8 3 13 11 At3g15280 "expressed protein very low similarity to cold regulated gene REP14 [Secale cereale] GI:20067233, late embryogenesis abundant protein [Picea glauca] GI:1161171" 8 3 13 12 At3g15340 expressed protein 8 3 13 13 At3g17920 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 8 3 13 14 At3g18000 "phosphoethanolamine N-methyltransferase 1 / PEAMT 1 (NMT1) identical to Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) (SP:Q9FR44){Arabidopsis thaliana}; strong similarity to phosphoethanolamine N-methyltransferase from [Spinacia oleracea] GI:7407189, [Triticum aestivum] GI:17887465; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 8 3 13 15 At3g18160 "peroxin-3 family protein contains Pfam domain, PF04882: Peroxin-3" 8 3 13 16 At3g18200 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 8 3 13 17 At3g18360 VQ motif-containing protein contains PF05678: VQ motif 8 3 13 18 At3g18400 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to GP:1279640 NAM {Petunia x hybrida} 8 3 13 19 At3g18560 expressed protein 8 3 13 20 At3g18620 zinc finger (DHHC type) family protein contains Pfam profile: PF01529 DHHC zinc finger domain 8 3 13 21 At3g21300 "RNA methyltransferase family protein contains TIGRfam TIGR00479: RNA methyltransferase, TrmA family" 8 3 13 22 At3g21360 expressed protein 8 3 13 23 At3g21540 "transducin family protein / WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (10 copies); similar to WD-repeat protein 3 (SP:Q9UNX4) [Homo sapiens]" 8 3 13 24 At3g21580 expressed protein 8 3 13 25 At3g21710 expressed protein 8 3 14 1 At3g21750 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 3 14 2 At3g21920 "pollen coat receptor kinase, putative contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana]; similar to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]" 8 3 14 3 At3g21980 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris] 8 3 14 4 At3g24690 expressed protein similar to hypothetical protein GB:AAB61487 from [Arabidopsis thaliana] 8 3 14 5 At3g24740 expressed protein 8 3 14 6 At3g24982 "leucine-rich repeat family protein, 5' fragment contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611 (19 copies); contains similarity to GB:AAD13301 from [Lycopersicon esculentum]" 8 3 14 7 At3g25060 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 3 14 8 At3g25210 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 domain of unknown function 8 3 14 9 At3g25270 hypothetical protein 8 3 14 10 At3g25550 F-box family protein 8 3 14 11 At3g25585 "aminoalcoholphosphotransferase, putative strong similarity to aminoalcoholphosphotransferase [Arabidopsis thaliana] GI:3661593; contains Pfam profile PF01066: CDP-alcohol phosphatidyltransferase" 8 3 14 12 At3g28210 zinc finger (AN1-like) family protein contains Pfam profile: PF01428 AN1-like zinc finger 8 3 14 13 At3g28270 expressed protein similar to At14a protein (GI:11994571 and GI:11994573) [Arabidopsis thaliana] 8 3 14 14 At3g28455 "CLE25, putative CLAVATA3/ESR-Related 25 (CLE25)" 8 3 14 15 At3g28510 AAA-type ATPase family protein contains Pfam profile: PF00004 ATPase family 8 3 14 16 At3g28690 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] Swiss-Prot:Q06548" 8 3 14 17 At3g28740 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 8 3 14 18 At3g28917 zinc finger homeobox family protein / ZF-HD homeobox family protein contains Pfam profile PF04770:ZF-HD protein dimerisation region 8 3 14 19 At3g28956 expressed protein low similarity to SP|O75575 Calcitonin gene-related peptide-receptor component protein {Homo sapiens} 8 3 14 20 At3g42750 hypothetical protein 8 3 14 21 At3g42800 expressed protein hypothetical proteins - Arabidopsis thaliana; expression supported by MPSS 8 3 14 22 At3g43120 auxin-responsive protein-related similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) from [Phaseolus aureus] 8 3 14 23 At3g43180 "zinc finger (C3HC4-type RING finger) family protein contains Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 8 3 14 24 At3g43390 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 8 3 14 25 At3g43450 hypothetical protein 8 3 15 1 At3g43610 tubulin family protein 8 3 15 2 At3g43684 hypothetical protein 8 3 15 3 At3g46640 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 8 3 15 4 At3g46700 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 3 15 5 At3g46880 expressed protein ; expression supported by MPSS 8 3 15 6 At3g46940 deoxyuridine 5'-triphosphate nucleotidohydrolase family contains Pfam profile: PF00692 deoxyuridine 5'-triphosphate nucleotidohydrolase 8 3 15 7 At3g47120 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 8 3 15 8 At3g47180 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 3 15 9 At3g47340 asparagine synthetase 1 [glutamine-hydrolyzing] / glutamine-dependent asparagine synthetase 1 (ASN1) identical to SP|P49078 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine- dependent asparagine synthetase) {Arabidopsis thaliana} 8 3 15 10 At3g47370 "40S ribosomal protein S20 (RPS20B) 40S RIBOSOMAL PROTEIN S20 - ARABIDOPSIS THALIANA,PID:g1350956" 8 3 15 11 At3g50190 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 8 3 15 12 At3g50230 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase (RKL1), Arabidopsis thaliana, EMBL:AF084034" 8 3 15 13 At3g50400 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 8 3 15 14 At3g50460 hypersensitive response protein 2 (HR2) identical to HR2 [Arabidopsis thaliana] GI:12958165; contains Pfam profile PF05659: Arabidopsis broad-spectrum mildew resistance protein RPW8 8 3 15 15 At3g50640 expressed protein 8 3 15 16 At3g50690 leucine-rich repeat family protein 8 3 15 17 At3g50870 "zinc finger (GATA type) family protein Arabidopsis thaliana mRNA for GATA transcription factor 3, PID:e1254739" 8 3 15 18 At3g50930 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 8 3 15 19 At3g53490 "expressed protein ADAM 13, Xenopus laevis, EMBL:XLU66003" 8 3 15 20 At3g53530 heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403 8 3 15 21 At3g53700 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 8 3 15 22 At3g53740 "60S ribosomal protein L36 (RPL36B) 60S RIBOSOMAL PROTEIN L36 - Schizosaccharomyces pombe, swissprot:Q92365" 8 3 15 23 At3g53900 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|P50926 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Lactococcus lactis}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 8 3 15 24 At3g53940 mitochondrial substrate carrier family protein 8 3 15 25 At3g54060 "hypothetical protein mucin MUC3, Homo sapiens, EMBL:AF007193" 8 3 16 1 At3g54120 reticulon family protein (RTNLB12) contains Pfam profile PF02453: Reticulon 8 3 16 2 At3g56890 F-box family protein-related predicted proteins - Arabidopsis thaliana; contains TIGRFAM TIGR01640: F-box protein interaction domain 8 3 16 3 At3g56950 small basic membrane integral family protein contains similarity to small basic membrane integral protein ZmSIP2-1 (GI:13447817) [Zea mays] 8 3 16 4 At3g57130 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 8 3 16 5 At3g57190 "peptide chain release factor, putative similar to SP|P07012 Peptide chain release factor 2 (RF-2) {Escherichia coli}; contains Pfam profile PF03462: PCRF domain" 8 3 16 6 At3g57350 nucleoporin interacting component-related contains weak hit to Pfam profile PF04097: Nucleoporin interacting component 8 3 16 7 At3g57390 "MADS-box protein (AGL18) agamous-like protein 15 - Arabidopsis thaliana, PIR:S71200" 8 3 16 8 At3g57560 "aspartate/glutamate/uridylate kinase family protein similar to acetylglutamate kinase from Porphyra purpurea [SP|P31595], Campylobacter jejuni [GI:6650364] contains Pfam profile PF00696: Amino acid kinase family" 8 3 16 9 At3g57620 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 8 3 16 10 At3g60380 expressed protein 8 3 16 11 At3g60430 hypothetical protein 8 3 16 12 At3g60590 expressed protein 8 3 16 13 At3g60650 expressed protein 8 3 16 14 At3g60810 expressed protein 8 3 16 15 At3g60870 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 8 3 16 16 At3g61060 F-box family protein / lectin-related low similarity to PP2 lectin polypeptide [Cucurbita maxima] GI:410437; contains Pfam profile PF00646: F-box domain 8 3 16 17 At3g61110 40S ribosomal protein S27 (ARS27A) identical to cDNA ribosomal protein S27 (ARS27A) GI:4193381 8 3 16 18 At4g00232 hypothetical protein 8 3 16 19 At4g00270 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 8 3 16 20 At4g00370 sugar transporter family protein contains Pfam profile PF00083: major facilitator superfamily protein 8 3 16 21 At4g00420 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 8 3 16 22 At4g00550 UDP-galactose:MGDG galactosyltransferase 2 / digalactosyldiacylglycerol synthase 2 (DGD2) identical to digalactosyldiacylglycerol synthase (DGD2) GI:18141112 [Arabidopsis thaliana] 8 3 16 23 At4g00580 COP1-interacting protein-related similar to COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646 8 3 16 24 At4g00720 shaggy-related protein kinase theta / ASK-theta (ASK8) identical to shaggy-related protein kinase theta (ASK-theta) [Arabidopsis thaliana] SWISS-PROT:Q96287 8 3 16 25 At4g00755 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 8 3 17 1 At4g03240 "frataxin protein-related contains weak similarity to Frataxin, mitochondrial precursor (Friedreich's ataxia protein) (Fxn) (Swiss-Prot:Q16595) [Homo sapiens]" 8 3 17 2 At4g03280 "cytochrome B6-F complex iron-sulfur subunit, chloroplast / Rieske iron-sulfur protein / plastoquinol-plastocyanin reductase (petC) identical to gi:9843639; identical to cDNA rieske iron-sulfur protein precursor (petC) GI:5725449" 8 3 17 3 At4g03420 expressed protein 8 3 17 4 At4g03480 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 8 3 17 5 At4g03640 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 8 3 17 6 At4g03750 hypothetical protein 8 3 17 7 At4g04040 "pyrophosphate--fructose-6-phosphate 1-phosphotransferase beta subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative strong similarity to SP|Q41141 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPI-PFK) {Ricinus communis}" 8 3 17 8 At4g04155 expressed protein 8 3 17 9 At4g08850 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 8 3 17 10 At4g08880 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 8 3 17 11 At4g09080 "chloroplast outer membrane protein, putative similar to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607" 8 3 17 12 At4g09140 DNA mismatch repair protein MLH1 (MLH1) identical to MLH1 protein [Arabidopsis thaliana] GI:3893081 8 3 17 13 At4g09360 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 8 3 17 14 At4g09440 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577); common family comprised of At4g09440, At1g66000, At1g66060" 8 3 17 15 At4g09600 gibberellin-regulated protein 3 (GASA3) / gibberellin-responsive protein 3 identical to SP|P46687 Gibberellin-regulated protein 3 precursor {Arabidopsis thaliana} 8 3 17 16 At4g09660 hypothetical protein 8 3 17 17 At4g12420 "multi-copper oxidase, putative (SKU5) identical to multi-copper oxidase-related protein (SKU5)(GI:18158154) [Arabidopsis thaliana]; similar to pollen-specific protein precursor - common tobacco, PIR2:S22495; contains Pfam profile: PF00394 Multicopper oxidase" 8 3 17 18 At4g12460 "oxysterol-binding family protein similar to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 8 3 17 19 At4g12640 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 8 3 17 20 At4g12710 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 8 3 17 21 At4g12860 "calcium-binding protein, putative similar to calcium-binding protein GI:6580549 from [Lotus japonicus]" 8 3 17 22 At4g12920 "aspartyl protease family protein low similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 8 3 17 23 At4g13100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 3 17 24 At4g13150 expressed protein 8 3 17 25 At4g15510 photosystem II reaction center PsbP family protein contains PsbP domain PF01789; identical to SP:O23403 (Arabidopsis thaliana) 8 3 18 1 At4g15545 expressed protein 8 3 18 2 At4g15730 expressed protein 8 3 18 3 At4g15765 "monooxygenase family protein similar to monooxygenase 1 (MO1) [gi:3426062], MO2 [gi:3426064]" 8 3 18 4 At4g15930 "dynein light chain, putative similar to dynein light chain 2 [Mus musculus] GI:15545995; contains Pfam profile PF01221: Dynein light chain type 1" 8 3 18 5 At4g15975 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 3 18 6 At4g16140 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 8 3 18 7 At4g16155 "dihydrolipoamide dehydrogenase 2, plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical to plastidic lipoamide dehydrogenase from Arabidopsis thaliana [gi:7159284]" 8 3 18 8 At4g18630 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 8 3 18 9 At4g18690 hypothetical protein similar to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423 8 3 18 10 At4g18850 hypothetical protein 8 3 18 11 At4g18905 transducin family protein / WD-40 repeat family protein contains 5 (4 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] 8 3 18 12 At4g19030 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; identical to cDNA NLM1 protein GI:2677613 8 3 18 13 At4g19090 "hypothetical protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 8 3 18 14 At4g19220 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 3 18 15 At4g19260 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 8 3 18 16 At4g22140 "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF01426: BAH domain" 8 3 18 17 At4g22170 F-box family protein contains F-box domain Pfam:PF00646 8 3 18 18 At4g22280 F-box family protein contains Pfam profile PF00646: F-box domain 8 3 18 19 At4g22330 alkaline phytoceramidase family / aPHC family contains Pfam profile: PF05875: alkaline phytoceramidase (aPHC) 8 3 18 20 At4g22510 hypothetical protein 8 3 18 21 At4g22560 expressed protein 8 3 18 22 At4g22730 "leucine-rich repeat transmembrane protein kinase, putative leucine rich repeat receptor-like kinase, Oryza sativa, PATCHX:E267533" 8 3 18 23 At4g22760 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 18 24 At4g25340 "immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related immunophilin FKBP46 - Spodoptera frugiperda (fall armyworm),PIR2:A55320" 8 3 18 25 At4g25390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 3 19 1 At4g25530 homeodomain protein (FWA) identical to Homeobox protein FWA (SP:Q9FVI6) [Arabidopsis thaliana]; contains Pfam profiles PF01852: START domain and PF00046: Homeobox domain; identical to cDNA homeodomain-containing transcription factor FWA (FWA)GI:13506819 8 3 19 2 At4g25590 "actin-depolymerizing factor, putative strong similarity to pollen specific actin-depolymerizing factor 2 [Nicotiana tabacum] GI:22857914; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 8 3 19 3 At4g25750 "ABC transporter family protein Bactrocera tryoni membrane transporter (white) gene, PID:g3676298" 8 3 19 4 At4g25810 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (XTR6) identical to xyloglucan endotransglycosylase-related protein GI:1244758 from [Arabidopsis thaliana]" 8 3 19 5 At4g25980 "cationic peroxidase, putative similar to cationic peroxidase [Arachis hypogaea] gi|166475|gb|AAA32676" 8 3 19 6 At4g26020 expressed protein weak similarity to cardiac muscle factor 1 [Gallus gallus] GI:14422164 8 3 19 7 At4g28520 "12S seed storage protein, putative / cruciferin, putative strong similarity to SP|P33525 Cruciferin CRU1 precursor (11S globulin) (12S storage protein) from Brassica napus; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305 isoform contains non-consensus AC acceptor splice site at intron 3" 8 3 19 8 At4g28580 "magnesium transporter CorA-like family protein (MRS2-6) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 8 3 19 9 At4g28720 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana" 8 3 19 10 At4g28780 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 8 3 19 11 At4g28980 cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1) identical to Cdk-activating kinase 1At [Arabidopsis thaliana] gi|3218550|dbj|BAA28775 8 3 19 12 At4g29020 glycine-rich protein supporting cDNA gi|20465684|gb|AY096677.1| 8 3 19 13 At4g29180 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 8 3 19 14 At4g29220 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 8 3 19 15 At4g31790 "diphthine synthase, putative (DPH5) similar to Diphthine synthase (Diphtamide biosynthesis methyltransferase) (DPH5) (SP:P32469) [Saccharomyces cerevisiae]; similar to CGI-30 protein (GI:4680699) [Homo sapiens]; similar to methyltransferase DPH5, Saccharomyces cerevisiae, PIR2:S30890; contains Pfam PF00590 : Tetrapyrrole (Corrin/Porphyrin) Methylases domain; contains TIGRFAMS TIGR00522 : diphthine synthase" 8 3 19 16 At4g31820 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 8 3 19 17 At4g31980 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 8 3 19 18 At4g32020 expressed protein NuLL 8 3 19 19 At4g32170 "cytochrome P450, putative cytochrome p450, Arabidopsis thaliana, PID:G2252844" 8 3 19 20 At4g32240 expressed protein 8 3 19 21 At4g32400 mitochondrial substrate carrier family protein 8 3 19 22 At4g32450 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 19 23 AT5G57480 PC-1 C05 8 3 19 24 3XSSC PC-1 C17 8 3 19 25 AT1G29930 PC-1 G05 8 3 20 1 3XSSC PC-1 G17 8 3 20 2 AT3G44150 PC-1 K05 8 3 20 3 3XSSC PC-1 K17 8 3 20 4 AT4G00810 PC-1 O05 8 3 20 5 3XSSC PC-1 O17 8 3 20 6 At4g35010 glycosyl hydrolase family 35 protein similar to beta-galactosidase BG1 GI:15081596 from [Vitis vinifera] 8 3 20 7 At4g35070 expressed protein 8 3 20 8 At4g35210 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 8 3 20 9 At4g35270 RWP-RK domain-containing protein similar to nodule inception protein GI:6448579 from (Lotus japonicus); contains Pfam profile: PF02042 RWP-RK domain 8 3 20 10 At4g35410 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 8 3 20 11 At4g35450 "ankyrin repeat family protein / AFT protein (AFT) contains ankyrin repeats, Pfam:PF00023; identical to cDNA AFT protein (AFT) GI:3478699" 8 3 20 12 At4g35610 "zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type" 8 3 20 13 At4g35670 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 [Vitis vinifera] GI:15081600; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 8 3 20 14 At4g38280 "expressed protein unknown protein F4L23.24 Arabidopsis thaliana chromosome II BAC F4L23, PID:g2583136" 8 3 20 15 At4g38340 RWP-RK domain-containing protein similar to nodule inception protein GI:6448579 from (Lotus japonicus); contains Pfam profile: PF02042 RWP-RK domain 8 3 20 16 At4g38520 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 8 3 20 17 At4g38580 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [PMID:9701579][GI:3168840]; nearly identical to farnesylated protein TFP6 [GI:4097553]; contains Heavy-metal-associated domain PF00403 8 3 20 18 At4g38760 "hypothetical protein KIAA0169 gene, Homo sapiens, D79991" 8 3 20 19 At4g38810 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 8 3 20 20 At4g38950 kinesin motor family protein similar to AtNACK1 kinesin-like protein (GI:19979627) [Arabidopsis thaliana]; similar to kinesin-like protein NACK1 (GI:19570247) [Nicotiana tabacum] 8 3 20 21 At4g38990 "glycosyl hydrolase family 9 protein endo-1,4-beta-glucanase precursor - Fragariax ananassa, PID:g3549291 A short intron was annotated between exons 4 and 5 to circumvent a frameshift. The frameshift may be artificial due to a sequencing error, or alternatively is genuine suggesting a truncated protein or pseudogene." 8 3 20 22 At5g02440 expressed protein 8 3 20 23 At5g02480 expressed protein p 8 3 20 24 At5g02610 "60S ribosomal protein L35 (RPL35D) ribosomal protein L35- cytosolic, Arabidopsis thaliana, PIR:T00549" 8 3 20 25 At5g02670 expressed protein 8 3 21 1 At5g02830 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 21 2 At5g02870 "60S ribosomal protein L4/L1 (RPL4D) 60S roibosomal protein L4, Arabidopsis thaliana, EMBL:CAA79104" 8 3 21 3 At5g03050 expressed protein 8 3 21 4 At5g03110 "expressed protein various predicted proteins, Arabidopsis thaliana" 8 3 21 5 At5g05770 homeobox-leucine zipper transcription factor family protein similar to to PRESSED FLOWER (GP:17907768) {Arabidopsis thaliana} 8 3 21 6 At5g05830 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 8 3 21 7 At5g05980 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS2) nearly identical to gi:17976705; identical to cDNA dihydrofolate synthetase/folylpolyglutamate synthetase (dhfs/fpgs2 gene) GI:17976704 8 3 21 8 At5g06030 self-incompatibility protein-related simlar to self-incompatibility [Papaver rhoeas] GI:3097260 8 3 21 9 At5g06180 expressed protein similar to unknown protein (sp|Q9ZE28) 8 3 21 10 At5g06220 expressed protein 8 3 21 11 At5g06370 "NC domain-containing protein contains Pfam domain, PF04970: NC domain" 8 3 21 12 At5g06430 "thioredoxin-related contains weak similarity to Swiss-Prot:Q9SEU7 thioredoxin M-type 3, chloroplast precursor (TRX-M3) [Arabidopsis thaliana]" 8 3 21 13 At5g09510 "40S ribosomal protein S15 (RPS15D) ribosomal protein S15 - Arabidopsis thaliana, EMBL:Z23161" 8 3 21 14 At5g09570 "expressed protein contains Pfam domain, PF04933: Protein of unknown function (DUF657)" 8 3 21 15 At5g09740 "histone acetyltransferase, putative similar to histone acetyltransferase [Homo sapiens] gi|8317213|gb|AAF72665" 8 3 21 16 At5g09800 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 8 3 21 17 At5g09960 expressed protein similar to unknown protein (emb|CAB61744.1) 8 3 21 18 At5g09995 expressed protein 8 3 21 19 At5g10150 expressed protein 8 3 21 20 At5g10210 expressed protein 8 3 21 21 At5g13330 "AP2 domain-containing transcription factor family protein similar to AP2 domain containing protein RAP2.6, Arabidopsis thaliana, EMBL:AF003099; contains Pfam profile PF00847: AP2 domain" 8 3 21 22 At5g13390 expressed protein 8 3 21 23 At5g13540 "expressed protein HERC2 - Homo sapiens, EMBL:AF071172; isoform contains non-consensus GG acceptor splice site at intron 6" 8 3 21 24 At5g13590 expressed protein 8 3 21 25 At5g13750 transporter-related 8 3 22 1 At5g13810 glutaredoxin family protein 8 3 22 2 At5g13980 glycosyl hydrolase family 38 protein similar to alpha-mannosidase GI:1419374 from [Homo sapiens] 8 3 22 3 At5g14030 "translocon-associated protein beta (TRAPB) family protein low similarity to SP|P23438 Translocon-associated protein, beta subunit precursor (TRAP-beta) (Signal sequence receptor beta subunit) {Canis familiaris}; contains Pfam profile PF05753: Translocon-associated protein beta (TRAPB)" 8 3 22 4 At5g16770 myb family transcription factor (MYB9) contains Pfam profile: PF00249 Myb-like DNA-binding domain 8 3 22 5 At5g16810 expressed protein 8 3 22 6 At5g16980 "NADP-dependent oxidoreductase, putative strong similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 8 3 22 7 At5g17030 "UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP glucose:flavonoid 3-o-glucosyltransferase from Vitis vinifera, EMBL:AF000372" 8 3 22 8 At5g17210 expressed protein 8 3 22 9 At5g17250 phosphatidylinositolglycan class O (PIG-O) family protein similar to Pig-o [Mus musculus] GI:8099973 8 3 22 10 At5g17420 "cellulose synthase, catalytic subunit (IRX3) identical to gi:5230423" 8 3 22 11 At5g17460 expressed protein 8 3 22 12 At5g20040 tRNA isopentenyltransferase 9 / IPP transferase 9 (IPT9) identical to tRNA isopentenyltransferase (IPT9) [Arabidopsis thaliana] GI:14279070 8 3 22 13 At5g20080 "NADH-cytochrome b5 reductase, putative similar to SP|P36060 NADH-cytochrome b5 reductase precursor (EC 1.6.2.2) {Saccharomyces cerevisiae}; contains Pfam profiles PF00175: Oxidoreductase NAD-binding domain, PF00970: oxidoreductase, FAD-binding" 8 3 22 14 At5g20230 plastocyanin-like domain-containing protein 8 3 22 15 At5g20290 "40S ribosomal protein S8 (RPS8A) ribosomal protein S8 - Zea mays, PIR:T04088" 8 3 22 16 At5g20470 "myosin, putative similar to PIR|T00727 myosin heavy chain PCR43 [Arabidopsis thaliana]" 8 3 22 17 At5g20540 expressed protein 8 3 22 18 At5g20690 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase PRK1, tomato, PIR:T07865" 8 3 22 19 At5g20730 auxin-responsive factor (ARF7) identical to auxin response factor 7 GI:4104929 from [Arabidopsis thaliana] 8 3 22 20 At5g24050 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 8 3 22 21 At5g24105 expressed protein 8 3 22 22 At5g24260 "prolyl oligopeptidase family protein similar to dipeptidyl peptidase IV [Stenotrophomonas maltophilia] GI:1753197; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF00930: Dipeptidyl peptidase IV (DPP IV) N-terminal region" 8 3 22 23 At5g24310 expressed protein strong similarity to unknown protein (emb|CAB66408.1) 8 3 22 24 At5g24420 glucosamine/galactosamine-6-phosphate isomerase-related contains weak similarity to Swiss-Prot:O95336 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) [Homo sapiens] 8 3 22 25 At5g24480 hypothetical protein similar to unknown protein (gb|AAD32930.1) 8 3 23 1 At5g24640 expressed protein similar to unknown protein (gb|AAC02775.1) 8 3 23 2 At5g24690 expressed protein 8 3 23 3 At5g27630 "acyl-CoA binding family protein similar to RING finger rngB protein, cytosolic - Dictyostelium discoideum, PIR:S68824; contains Pfam profiles PF01344: Kelch motif, PF00887: Acyl CoA binding protein (ACBP)" 8 3 23 4 At5g27690 heavy-metal-associated domain-containing protein very low similarity to copper homeostasis factor from Arabidopsis thaliana [gi:3168840]; contains Pfam heavy metal associated domain PF00403 8 3 23 5 At5g27850 "60S ribosomal protein L18 (RPL18C) 60S ribosomal protein L18, Arabidopsis thaliana, SWISSPROT:RL18_ARATH" 8 3 23 6 At5g27920 F-box family protein contains similarity to leucine-rich repeats containing F-box protein FBL3 GI:5919219 from [Homo sapiens] 8 3 23 7 At5g28080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 3 23 8 At5g28150 expressed protein 8 3 23 9 At5g28340 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 3 23 10 At5g28400 expressed protein 8 3 23 11 At5g36670 PHD finger family protein 8 3 23 12 At5g36730 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 8 3 23 13 At5g36925 expressed protein 8 3 23 14 At5g36980 "hypothetical protein predicted protein, Arabidopsi thaliana" 8 3 23 15 At5g37160 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 8 3 23 16 At5g37210 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 3 23 17 At5g37380 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 8 3 23 18 At5g37420 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 8 3 23 19 At5g40310 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 8 3 23 20 At5g40370 "glutaredoxin, putative similar to glutaredoxin [Ricinus communis] SWISS-PROT:P55143" 8 3 23 21 At5g40530 expressed protein contains Pfam profile PF05148: Protein of unknown function (DUF691) 8 3 23 22 At5g40580 "20S proteasome beta subunit B (PBB2) (PRCFC) identical to 20S proteasome beta subunit PBB2 [Arabidopsis thaliana] GI:3421104, cDNA proteasome subunit prcfc GI:2511575" 8 3 23 23 At5g40730 arabinogalactan-protein (AGP24) 8 3 23 24 At5g40790 hypothetical protein 8 3 23 25 At5g40960 expressed protein 8 3 24 1 At5g41020 myb family transcription factor contains Pfam profile: PF00249 Myb DNA binding domain 8 3 24 2 At5g43700 auxin-responsive protein / indoleacetic acid-induced protein 4 (IAA4) / auxin-induced protein (AUX2-11) identical to SP|P33077 Auxin-responsive protein IAA4 (Indoleacetic acid-induced protein 4) (Auxin-induced protein AUX2-11) {Arabidopsis thaliana} 8 3 24 3 At5g43755 expressed protein ; expression supported by MPSS 8 3 24 4 At5g43930 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens] 8 3 24 5 At5g43960 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 8 3 24 6 At5g44120 12S seed storage protein (CRA1) nearly identical to SP|P15455 [Plant Mol Biol 11:805-820 (1988)]; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305 8 3 24 7 At5g44180 "homeobox transcription factor, putative similar to homeobox transcription factor Hox7/homeotic protein Hox7 (GI:19486) {Lycopersicon peruvianum}; similar to GP|4165087| Williams-Beuren syndrome deletion transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT domain and Pfam PF00046: Homeobox domain" 8 3 24 8 At5g44320 "eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative similar to initiation factor 3d [Arabidopsis thaliana] GI:12407755, SP|O15371 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d) {Homo sapiens}; contains Pfam profile PF05091: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)" 8 3 24 9 At5g44370 "transporter-related similar to vesicular glutamate transporter 2 [Mus musculus] GI:15811369, Na-dependent inorganic phosphate cotransporter [Homo sapiens] GI:7328923; contains Pfam profile PF00083: major facilitator superfamily protein" 8 3 24 10 At5g46910 transcription factor jumonji (jmj) family protein contains Pfam domains PF02375: jmjN domain and PF02373: jmjC domain 8 3 24 11 At5g46960 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 8 3 24 12 At5g47120 Bax inhibitor-1 putative / BI-1 putative SP:Q9LD45: Bax inhibitor-1 (BI-1) (AtBI-1). [Mouse-ear cress] {Arabidopsis thaliana} 8 3 24 13 At5g47180 "vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia], to VAMP-associated protein B GI:4240464 [Rattus norvegicus] and to Vesicle-associated membrane protein/synaptobrevin binding protein (VAP-33) (SP:Q16943)[Aplysia californica]" 8 3 24 14 At5g47340 palmitoyl protein thioesterase family protein 8 3 24 15 At5g47400 hypothetical protein 8 3 24 16 At5g47500 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 8 3 24 17 At5g47560 "sodium/dicarboxylate cotransporter, putative similar to SWISS-PROT:Q13183 renal sodium/dicarboxylate cotransporter [Human]{Homo sapiens}" 8 3 24 18 At5g50200 expressed protein similar to unknown protein (pir||T05562) isoform contains a non-consensus AT acceptor splice site at intron 1 8 3 24 19 At5g50250 "31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative similar to SP|Q04836 31 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein RNP-T) (1/2/3) (AtRBP33) (cp31) {Arabidopsis thaliana}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 3 24 20 At5g50410 expressed protein 8 3 24 21 At5g50470 "CCAAT-box binding transcription factor Hap5a, putative contains similarity to GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}" 8 3 24 22 At5g50650 "WD-40 repeat family protein / St12p protein, putative contains 4 WD-40 repeats (PF0400); similar to St12p protein GI:166878 [Arabidopsis thaliana]" 8 3 24 23 At5g50730 expressed protein ; expression supported by MPSS 8 3 24 24 At5g50890 hypothetical protein 8 3 24 25 At5g50930 hypothetical protein similar to unknown protein (emb|CAB61034.1) 8 3 25 1 At5g53690 hypothetical protein 8 3 25 2 At5g53750 expressed protein strong similarity to unknown protein (pir||T08938) 8 3 25 3 At5g53895 hypothetical protein 8 3 25 4 At5g53940 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 8 3 25 5 At5g54090 DNA mismatch repair MutS family protein low similarity to SP|Q56239 DNA mismatch repair protein mutS {Thermus aquaticus; contains Pfam profile PF00488: MutS domain V 8 3 25 6 At5g54140 "IAA-amino acid hydrolase, putative (ILL3) identical to IAA-amino acid hydrolase homolog ILL3 [Arabidopsis thaliana] gi|3420801|gb|AAC31939" 8 3 25 7 At5g54310 ARF GAP-like zinc finger-containing protein ZIGA3 (ZIGA3) nearly identical to ARF GAP-like zinc finger-containing protein ZIGA3 GI:10441352 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 8 3 25 8 At5g54370 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein (GI:1350543)[Picea glauca] 8 3 25 9 At5g57060 expressed protein 8 3 25 10 At5g57120 expressed protein weak similarity to SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens} 8 3 25 11 At5g57240 oxysterol-binding family protein low similarity to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens}; contains Pfam profile PF01237: Oxysterol-binding protein 8 3 25 12 At5g57310 hypothetical protein 8 3 25 13 At5g57450 DNA repair family protein contains similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3 (X-ray repair cross-complementing protein 3) [Homo sapiens] 8 3 25 14 At5g57520 "zinc finger (C2H2 type) family protein (ZFP2) identical to zinc finger protein 2 (ZFP2) GI:790674 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 8 3 25 15 At5g57655 xylose isomerase family protein contains similarity to Xylose isomerase (EC 5.3.1.5) (Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus] 8 3 25 16 At5g57700 BNR/Asp-box repeat family protein contains Pfam PF02012: BNR/Asp-box repeat 8 3 25 17 At5g60260 "expressed protein various predicted proteins, Arabidopsis thaliana" 8 3 25 18 At5g60320 "lectin protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain, PF00139: Legume lectins beta domain, and PF00138: Legume lectins alpha domain" 8 3 25 19 At5g60460 sec61beta family protein similar to SP|P52870 Protein transport protein SEC61 beta 1 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF03911: Sec61beta family 8 3 25 20 At5g60520 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 8 3 25 21 At5g60650 expressed protein ; expression supported by MPSS 8 3 25 22 At5g60710 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|P97280 Inter-alpha-trypsin inhibitor heavy chain H3 precursor {Mesocricetus auratus}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 8 3 25 23 At5g60870 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 8 3 25 24 At5g60930 "chromosome-associated kinesin, putative microtubule-associated motor KIF4 , Mus musculus, PIR:A54803" 8 3 25 25 At5g63620 "oxidoreductase, zinc-binding dehydrogenase family protein contains PFAM zinc-binding dehydrogenase domain PF00107" 8 3 26 1 At5g63680 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Glycine max] SWISS-PROT:Q42806" 8 3 26 2 At5g63860 "UVB-resistance protein (UVR8) identical to UVB-resistance protein UVR8 (GI:5478530, GB:AAD43920.1) [Arabidopsis thaliana]; contains Pfam 00415: Regulator of chromosome condensation (RCC1)" 8 3 26 3 At5g63905 expressed protein 8 3 26 4 At5g64060 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365: No apical meristem (NAM) protein 8 3 26 5 At5g64110 "peroxidase, putative similar to peroxidase ATP3a [Arabidopsis thaliana] gi|1546698|emb|CAA67340" 8 3 26 6 At5g64250 "2-nitropropane dioxygenase family / NPD family contains Pfam profile PF03060: oxidoreductase, 2-nitropropane dioxygenase (NPD) family" 8 3 26 7 At5g64310 arabinogalactan-protein (AGP1) identical to gi:3883120 gb:AAC77823 8 3 26 8 At5g66720 5-azacytidine resistance protein -related contains weak similarity to 5-azacytidine resistance protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces pombe] 8 3 26 9 At5g66770 scarecrow transcription factor family protein 8 3 26 10 At5g66930 expressed protein similar to unknown protein (pir||T38383) 8 3 26 11 At5g66980 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 8 3 26 12 At5g67140 F-box family protein similar to unknown protein (dbj|BAA78736.1) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 8 3 26 13 At5g67180 "AP2 domain-containing transcription factor, putative similar to (SP:P47927) Floral homeotic protein APETALA2. [Mouse-ear cress] {Arabidopsis thaliana}" 8 3 26 14 At5g67350 expressed protein 8 3 26 15 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) identical to SP|Q43873 Peroxidase 73 precursor (EC 1.11.1.7) (Atperox P73) (PRXR11) (ATP10a) {Arabidopsis thaliana} 8 3 26 16 At3g42750 hypothetical protein 8 3 26 17 At3g42800 expressed protein hypothetical proteins - Arabidopsis thaliana; expression supported by MPSS 8 3 26 18 At3g43120 auxin-responsive protein-related similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) from [Phaseolus aureus] 8 3 26 19 At3g43180 "zinc finger (C3HC4-type RING finger) family protein contains Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 8 3 26 20 At3g43390 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 8 3 26 21 At3g43450 hypothetical protein 8 3 26 22 At3g43610 tubulin family protein 8 3 26 23 At3g43684 hypothetical protein 8 3 26 24 Blank Blank 8 3 26 25 Blank Blank 8 4 1 1 atc02 Randomly generated negative control 8 4 1 2 atc08 Randomly generated negative control 8 4 1 3 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 8 4 1 4 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 8 4 1 5 Alien4 Control: Stratagene Spotreport Alien Oligo 8 4 1 6 Alien10 Control: Stratagene Spotreport Alien Oligo 8 4 1 7 atc06 Randomly generated negative control 8 4 1 8 atc12 Randomly generated negative control 8 4 1 9 At1g03590 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 8 4 1 10 At1g03660 expressed protein contains 2 predicted transmembrane domains; expression supported by MPSS 8 4 1 11 At1g03800 ERF domain protein 10 (ERF10) identical to ERF domain protein 10 GI:11414990 from [Arabidopsis thaliana] 8 4 1 12 At1g03850 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 8 4 1 13 At1g03980 phytochelatin synthase 2 (PCS2) identical to phytochelatin synthase [Arabidopsis thaliana] gi|16519291|gb|AAK94671 8 4 1 14 At1g04030 expressed protein 8 4 1 15 At1g04200 expressed protein Contains similarity to gb|Z69902 from C. elegans 8 4 1 16 At1g04260 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor [Mus musculus] GI:7716652; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 8 4 1 17 At1g06920 ovate family protein 58% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 8 4 1 18 At1g06960 "small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative non-consensus splice donor GC at exon 4; similar to spliceosomal protein (U2B) GI:169588 from [Solanum tuberosum]" 8 4 1 19 At1g07135 glycine-rich protein 8 4 1 20 At1g07190 hypothetical protein 8 4 1 21 At1g07350 "transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269 (1997))" 8 4 1 22 At1g07390 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 8 4 1 23 At1g07510 "FtsH protease, putative similar to AAA-metalloprotease FtsH [Pisum sativum] GI:15021761; contains Pfam profiles PF01434: Peptidase family M41, PF00004: ATPase AAA family" 8 4 1 24 At1g07570 protein kinase (APK1a) identical to Protein kinase APK1A from [Arabidopsis thaliana] SWISS-PROT:Q06548 8 4 1 25 At1g10050 "glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein similar to GB:AAD27896 to endoxylanases gi|1255238 (Thermoanaerobacterium thermosulfurigenes), gi|1813595 (Hordeum vulgare) and others ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain" 8 4 2 1 At1g10095 protein prenyltransferase alpha subunit-related contains weak hit to Pfam profile PF01239: Protein prenyltransferase alpha subunit repeat 8 4 2 2 At1g10280 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 8 4 2 3 At1g10340 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 8 4 2 4 At1g10490 expressed protein contains Pfam profile PF05127: Putative ATPase (DUF699) 8 4 2 5 At1g10540 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 8 4 2 6 At1g10660 expressed protein 8 4 2 7 At1g10690 expressed protein 8 4 2 8 At1g13390 expressed protein 8 4 2 9 At1g13450 DNA binding protein GT-1 identical to DNA binding protein GT-1 GI:598073 from [Arabidopsis thaliana] 8 4 2 10 At1g13620 hypothetical protein 8 4 2 11 At1g13680 expressed protein 8 4 2 12 At1g13890 "SNAP25 homologous protein, putative / synaptosomal-associated protein SNAP25-like, putative (SNAP30) identical to SP|Q9LMG8 Putative SNAP25 homologous protein SNAP30 (AtSNAP30) (Synaptosomal-associated protein SNAP25-like 3) {Arabidopsis thaliana}; similar to SP|Q9S7P9 SNAP25 homologous protein SNAP33 (AtSNAP33) (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a) {Arabidopsis thaliana}; contains Pfam profile: PF05739 SNARE domain" 8 4 2 13 At1g13950 eukaryotic translation initiation factor 5A-1 / eIF-5A 1 identical to SP|Q9XI91 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Arabidopsis thaliana} 8 4 2 14 At1g14140 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 8 4 2 15 At1g14180 expressed protein 8 4 2 16 At1g16790 ribosomal protein-related similar to Chloroplast 30S ribosomal protein S8 (SP:P21508) [Euglena gracilis] 8 4 2 17 At1g16840 expressed protein 8 4 2 18 At1g16960 expressed protein 8 4 2 19 At1g17030 expressed protein 8 4 2 20 At1g17200 integral membrane family protein Location of est 136A23T7 (gb|T45563); contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 8 4 2 21 At1g17260 "ATPase 10, plasma membrane-type, putative / proton pump 10, putative / proton-exporting ATPase, putative strong similarity to SP|Q43128 ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump 10) {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profile PF00690: Cation transporter/ATPase, N-terminus" 8 4 2 22 At1g17430 "hydrolase, alpha/beta fold family protein low similarity to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}, contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 8 4 2 23 At1g17480 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 8 4 2 24 At1g20380 "prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative similar to SP|P48147 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) {Homo sapiens}; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF02897: Prolyl oligopeptidase, N-terminal beta-propeller domain" 8 4 2 25 At1g20450 dehydrin (ERD10) identical to dehydrin ERD10 (Low-temperature-induced protein LTI45) [Arabidopsis thaliana] SWISS-PROT:P42759 8 4 3 1 At1g20590 "cyclin, putative similar to SP|Q40671 G2/mitotic-specific cyclin 2 (B-like cyclin) (CYCOS2) {Oryza sativa}; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 8 4 3 2 At1g20630 catalase 1 identical to catalase 1 GI:2511725 from [Arabidopsis thaliana] 8 4 3 3 At1g20795 F-box family protein contains Pfam profile: PF00646 F-box domain 8 4 3 4 At1g20840 transporter-related low similarity to D-xylose proton-symporter [Lactobacillus brevis] GI:2895856; contains Pfam profile PF00083: major facilitator superfamily protein 8 4 3 5 At1g21010 expressed protein 8 4 3 6 At1g21070 transporter-related low similarity to GDP-Mannose transporter [Arabidopsis thaliana] GI:15487237; contains Pfam profile PF00892: Integral membrane protein 8 4 3 7 At1g23740 "oxidoreductase, zinc-binding dehydrogenase family protein contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 8 4 3 8 At1g23800 "aldehyde dehydrogenase, mitochondrial (ALDH3) nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 [Arabidopsis thaliana] gi|19850249|gb|AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein" 8 4 3 9 At1g23935 apoptosis inhibitory protein 5 (API5)-related contains weak hit to Pfam profile PF05918: Apoptosis inhibitory protein 5 (API5) 8 4 3 10 At1g23970 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 8 4 3 11 At1g24145 expressed protein 8 4 3 12 At1g24200 paired amphipathic helix repeat-containing protein similar to Sin3 protein [Yarrowia lipolytica] GI:18076824; contains Pfam profile PF02671: Paired amphipathic helix repeat 8 4 3 13 At1g24330 "armadillo/beta-catenin repeat family protein / U-box domain-containing family protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 8 4 3 14 At1g24390 hypothetical protein similar to EST emb|Z37190 8 4 3 15 At1g28100 expressed protein 8 4 3 16 At1g28130 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 8 4 3 17 At1g28290 pollen Ole e 1 allergen and extensin family protein similar to arabinogalactan protein [Daucus carota] GI:11322245; contains Pfam profile PF01190: Pollen proteins Ole e I family 8 4 3 18 At1g28330 "dormancy-associated protein, putative (DRM1) identical to dormancy-associated protein [Arabidopsis thaliana] GI:2995990; similar to dormancy-associated protein GI:2605887 from [Pisum sativum]; contains Pfam profile PF05564: Dormancy/auxin associated protein" 8 4 3 19 At1g28440 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GI:4105699 from [Arabidopsis thaliana]" 8 4 3 20 At1g28500 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 8 4 3 21 At1g28630 expressed protein ; expression supported by MPSS 8 4 3 22 At1g28680 transferase family protein similar to elicitor inducible gene product EIG-I24 [Nicotiana tabacum] [gi:10798748]; contains Pfam transferase family domain PF00248 8 4 3 23 At1g31830 amino acid permease family protein weak similarity to y+LAT1a (amino acid transporter) [Mus musculus] GI:3970791; contains Pfam profile PF00324: Amino acid permease 8 4 3 24 At1g31880 expressed protein 8 4 3 25 At1g32080 "membrane protein, putative contains 12 transmembrane domains; similar to yohK (GI:405873) [Escherichia coli]" 8 4 4 1 At1g32150 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 8 4 4 2 At1g32310 expressed protein 8 4 4 3 At1g32370 tobamovirus multiplication protein 2B (TOM2B) identical to tobamovirus multiplication 2B [Arabidopsis thaliana] gi|32698522|dbj|BAC24020; PMID: 12514139 8 4 4 4 At1g32470 "glycine cleavage system H protein, mitochondrial, putative similar to SP|P25855 Glycine cleavage system H protein 1, mitochondrial precursor {Arabidopsis thaliana}; contains Pfam profile PF01597: Glycine cleavage H-protein" 8 4 4 5 At1g32530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger); weak similarity to interaptin (GI:3549261) [Dictyostelium discoideum] weak similarity to Axoneme-associated protein mst101(2) (Swiss-Prot:Q08696) [Drosophila hydei]" 8 4 4 6 At1g36160 acetyl-CoA carboxylase 1 (ACC1) nearly identical to acetyl-CoA carboxylase 1 (ACC1) [Arabidopsis thaliana] GI:11869927 8 4 4 7 At1g36320 "expressed protein similar to hypothetical protein GB:CAB37532 from [Arabidopsis thaliana]," 8 4 4 8 At1g36920 hypothetical protein 8 4 4 9 At1g36980 expressed protein 8 4 4 10 At1g38630 hypothetical protein 8 4 4 11 At1g40087 hypothetical protein 8 4 4 12 At1g41920 hypothetical protein 8 4 4 13 At1g42400 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 8 4 4 14 At1g48320 thioesterase family protein similar to ComAB [Bacillus licheniformis] GI:1834379; contains Pfam profile PF03061: thioesterase family protein 8 4 4 15 At1g48380 root hair initiation protein root hairless 1 (RHL1) 8 4 4 16 At1g48550 vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein contains Pfam profile PF03643: Vacuolar protein sorting-associated protein 26 8 4 4 17 At1g48600 "phosphoethanolamine N-methyltransferase 2, putative (NMT2) very similar to |PEM2_ARATH Putative phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103) (SP:Q944H0){Arabidopsis thaliana}; very similar to Halotolerance protein Hal3b (SP:P94063)[Arabidopsis thaliana]; to similar to GB:AAF61950 from [Spinacia oleracea]" 8 4 4 18 At1g48760 "delta-adaptin, putative similar to SP|O14617 Adapter-related protein complex 3 delta 1 subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam profile: PF01602 Adaptin N terminal region" 8 4 4 19 At1g48820 terpene synthase/cyclase family protein similar to terpene cyclase GI:9293912 from [Arabidopsis thaliana] 8 4 4 20 At1g49000 expressed protein 8 4 4 21 At1g49040 "stomatal cytokinesis defective / SCD1 protein (SCD1) contains Pfam PF02141: DENN (AEX-3) domain; contains Pfam PF00400: WD domain, G-beta repeat (8 copies); identical to stomatal cytokinesis defective [Arabidopsis thaliana] GI:19743728; supporting cDNA gi|19743727|gb|AY082605.1|; PMID 12874123" 8 4 4 22 At1g52030 "myrosinase-binding protein, putative (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding protein-like f-AtMBP [Arabidopsis thaliana]; similar to myrosinase binding protein GI:1711295 from [Brassica napus]; contains Pfam PF01419: Jacalin-like lectin domain; identical to cDNA myrosinase-binding protein-like protein (MBP1.2) GI:6760446" 8 4 4 23 At1g52087 hypothetical protein 8 4 4 24 At1g52260 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 8 4 4 25 At1g52315 expressed protein 8 4 5 1 At1g52450 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 8 4 5 2 At1g52500 "formamidopyrimidine-DNA glycolase family protein / mutM, putative (MMH-1) identical to mutM homologue-2 [Arabidopsis thaliana] GP:3550983 PMID:9819050; contains Pfam profile PF01149: Formamidopyrimidine-DNA glycosylase" 8 4 5 3 At1g52660 "disease resistance protein, putative similar to NBS/LRR disease resistance protein GI:9758302 from [Arabidopsis thaliana]" 8 4 5 4 At1g52710 cytochrome c oxidase-related similar to SP|P00428 Cytochrome c oxidase polypeptide Vb (EC 1.9.3.1) (VI) [Bovine] {Bos taurus} 8 4 5 5 At1g55365 hypothetical protein 8 4 5 6 At1g55400 hypothetical protein 8 4 5 7 At1g55545 nucleoporin-related similar to nucleoporin CAN [Xenopus laevis] gi|5764080|emb|CAB53357 8 4 5 8 At1g55600 WRKY family transcription factor similar to SPF1 protein GI:484261 from [Ipomoea batatas]; contains Pfam profile: PF03106 WRKY DNA -binding domain 8 4 5 9 At1g55760 BTB/POZ domain-containing protein Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56 protein (GI:17483747) [Mus musculus] 8 4 5 10 At1g55810 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family" 8 4 5 11 At1g55960 expressed protein weak similarity to SP|P53808 Phosphatidylcholine transfer protein (PC-TP) {Mus musculus} 8 4 5 12 At1g56010 transcription activator NAC1 (NAC1) contains Pfam PF02365: No apical meristem (NAM) domain; identical to NAC1 GB:AAF21437 GI:6649236 from [Arabidopsis thaliana] 8 4 5 13 At1g60690 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 8 4 5 14 At1g60740 "peroxiredoxin type 2, putative strong similarity to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] GI:4928472; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 8 4 5 15 At1g60930 "DNA helicase, putative strong similarity to DNA Helicase recQl4B [Arabidopsis thaliana] GI:11121451; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF00570: HRDC domain" 8 4 5 16 At1g60980 "gibberellin 20-oxidase, putative similar to gibberellin 20-oxidase GB:CAA58295 from [Arabidopsis thaliana]" 8 4 5 17 At1g61105 disease resistance protein-related contains weak hit to InterPro:IPR000157 TIR domain 8 4 5 18 At1g61160 expressed protein 8 4 5 19 At1g61340 F-box family protein contains Pfam PF00646: F-box domain; similar to late embryogenesis abundant protein GI:1350540 from [Picea glauca] 8 4 5 20 At1g61400 "S-locus protein kinase, putative similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 8 4 5 21 At1g64150 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 8 4 5 22 At1g64200 "vacuolar ATP synthase subunit E, putative / V-ATPase E subunit, putative / vacuolar proton pump E subunit, putative similar to SP|Q39258 Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) {Arabidopsis thaliana}; contains Pfam profile PF01991: ATP synthase (E/31 kDa) subunit" 8 4 5 23 At1g64370 expressed protein 8 4 5 24 At1g64410 hypothetical protein 8 4 5 25 At1g64600 expressed protein similar to Hypothetical 72.2 kDa protein in RPS27A-GPM1 intergenic region (Swiss-Prot:P36056) [Saccharomyces cerevisiae] 8 4 6 1 At1g64650 expressed protein 8 4 6 2 At1g64820 "MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family; contains 12 transmembrane domains, PMID: 11152613" 8 4 6 3 At1g64880 ribosomal protein S5 family protein contains similarity to 30S ribosomal protein S5 GI:6969105 from [Campylobacter jejuni] 8 4 6 4 At1g67680 expressed protein 8 4 6 5 At1g67720 leucine-rich repeat family protein / protein kinase family protein contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains Pfam doamins PF00069: Protein kinase domain and PF00560: Leucine Rich Repeat 8 4 6 6 At1g67850 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 8 4 6 7 At1g67890 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 8 4 6 8 At1g68020 "glycosyl transferase family 20 protein / trehalose-phosphatase family protein similar to SP|Q00764 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit (EC 2.4.1.15) (Trehalose-6-phosphate synthase) {Saccharomyces cerevisiae}; contains Pfam profile: PF02358 trehalose-phosphatase" 8 4 6 9 At1g68080 expressed protein 8 4 6 10 At1g68250 expressed protein 8 4 6 11 At1g68310 expressed protein contains Pfam profile PF01883: Domain of unknown function 8 4 6 12 At1g70970 F-box family protein contains F-box domain Pfam:PF00646 8 4 6 13 At1g71015 expressed protein 8 4 6 14 At1g71190 expressed protein 8 4 6 15 At1g71240 expressed protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 8 4 6 16 At1g71400 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 8 4 6 17 At1g71460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 6 18 At1g71697 "choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375" 8 4 6 19 At1g71760 hypothetical protein 8 4 6 20 At1g74500 bHLH family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 8 4 6 21 At1g74540 "cytochrome P450, putative similar to cytochrome P450 GB:O48922 [Glycine max]; contains Pfam profile: PF00067 cytochrome P450" 8 4 6 22 At1g74740 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 8 4 6 23 At1g74800 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 8 4 6 24 At1g74960 "3-ketoacyl-ACP synthase, putative similar to 3-ketoacyl-ACP synthase [Cuphea pulcherrima] gi|3800747|gb|AAC68860; identical to cDNA beta-ketoacyl-ACP synthetase 2 nuclear gene for plastid product GI:14582700" 8 4 6 25 At1g75030 pathogenesis-related thaumatin family protein identical to thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile: PF00314 Thaumatin family 8 4 7 1 At1g75190 expressed protein 8 4 7 2 At1g75240 zinc finger homeobox family protein / ZF-HD homeobox family protein 8 4 7 3 AT5G57480 PC-1 D05 8 4 7 4 3XSSC PC-1 D17 8 4 7 5 AT1G29930 PC-1 H05 8 4 7 6 3XSSC PC-1 H17 8 4 7 7 AT3G44150 PC-1 L05 8 4 7 8 3XSSC PC-1 L17 8 4 7 9 AT4G00810 PC-1 P05 8 4 7 10 3XSSC PC-1 P17 8 4 7 11 At1g77970 hydroxyproline-rich glycoprotein family protein 8 4 7 12 At1g78030 expressed protein 8 4 7 13 At1g78200 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GB:CAA72341 [Medicago sativa]; contains Pfam profile: PF00481 Protein phosphatase 2C" 8 4 7 14 At1g78240 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 8 4 7 15 At1g78420 expressed protein 8 4 7 16 At1g78480 prenyltransferase/squalene oxidase repeat-containing protein similar to beta-Amyrin Synthase GI:3688600 from [Panax ginseng] 8 4 7 17 At1g78640 expressed protein ; expression supported by MPSS 8 4 7 18 At1g78680 gamma-glutamyl hydrolase (GGH1) / gamma-Glu-X carboxypeptidase / conjugase identical to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana} 8 4 7 19 At2g01260 expressed protein 8 4 7 20 At2g01290 expressed protein 8 4 7 21 At2g01440 "ATP-dependent DNA helicase, putative " 8 4 7 22 At2g01500 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana] 8 4 7 23 At2g01660 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 8 4 7 24 At2g01720 ribophorin I family protein similar to SP|P04843 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor (EC 2.4.1.119) (Ribophorin I) {Homo sapiens}; contains Pfam profile PF04597: Ribophorin I 8 4 7 25 At2g01890 "purple acid phosphatase, putative contains Pfam profile: PF00149 calcineurin-like phosphoesterase; identical to purple acid phosphatase (GI:20257479) [Arabidopsis thaliana];" 8 4 8 1 At2g01930 expressed protein 8 4 8 2 At2g05120 expressed protein 8 4 8 3 At2g05210 expressed protein 8 4 8 4 At2g05430 expressed protein 8 4 8 5 At2g05510 glycine-rich protein 8 4 8 6 At2g05720 transducin family protein / WD-40 repeat family protein Similar to U4/U6 small nuclear ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens]; contains 4 WD-40 repeats 8 4 8 7 At2g05830 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to CIG2 [Nicotiana tabacum] GI:15216226, IDI2 [Hordeum vulgare subsp. vulgare] GI:12407304; weak similarity to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family" 8 4 8 8 At2g06000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 8 9 At2g06020 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 8 4 8 10 At2g14160 RNA recognition motif (RRM)-containing protein 8 4 8 11 At2g14255 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain; low similarity to SP:Q96GR4 Zinc finger DHHC domain containing protein 12 (Zinc finger protein 400) {Homo sapiens} 8 4 8 12 At2g14560 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 8 4 8 13 At2g14620 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endo-transglycosylase-like protein XET-1 GI:5070246 from [Medicago truncatula]" 8 4 8 14 At2g14780 "hypothetical protein similar to At3g43370, At1g34710, At1g27810, At3g42760, At1g25784, At4g08890" 8 4 8 15 At2g14835 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 4 8 16 At2g15010 "thionin, putative similar to thionin [Arabidopsis thaliana] gi|1181533|gb|AAC41679" 8 4 8 17 At2g15080 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 8 4 8 18 At2g18100 expressed protein 8 4 8 19 At2g18160 bZIP transcription factor family protein contains a bZIP transcription factor basic domain signature (PDOC00036) 8 4 8 20 At2g18290 "anaphase-promoting complex, subunit 10 family / APC10 family contains Pfam PF03256: Anaphase-promoting complex, subunit 10 (APC10) domain; similar to anaphase promoting complex subunit APC10 (GI:6463666) [Homo sapiens]" 8 4 8 21 At2g18340 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to SP|P20075 Embryonic protein DC-8 {Daucus carota}; contains Pfam profile PF02987: Late embryogenesis abundant protein 8 4 8 22 At2g18500 ovate family protein 69% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 8 4 8 23 At2g18560 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile PF00201: UDP-glucoronosyl and UDP-glucosyl transferase; contains similarity to flavonol 3-o-glucosyltransferase 5 from [Manihot esculenta] 8 4 8 24 At2g18750 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 8 4 8 25 At2g18810 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 8 4 9 1 At2g21470 "SUMO activating enzyme 2 (SAE2) nearly identical to SUMO activating enzyme 2 [Arabidopsis thaliana] GI:22652854; contains Pfam profiles PF00899: ThiF family, PF02134: Repeat in ubiquitin-activating (UBA) protein" 8 4 9 2 At2g21520 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]" 8 4 9 3 At2g21690 "RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from {Sinapis alba} SP|P49311, {Brassica napus} SP|Q05966, {Arabidopsis thaliana} SP|Q03251; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 4 9 4 At2g21770 "cellulose synthase, catalytic subunit, putative similar to gi:2827141 cellulose synthase catalytic subunit, Arabidopsis thaliana (Ath-A)" 8 4 9 5 At2g21930 F-box family protein contains F-box domain Pfam:PF00646 8 4 9 6 At2g21970 stress enhanced protein 2 (SEP2) nearly identical to stress enhanced protein 2; SEP2 (GI:7384980) [Arabidopsis thaliana] 8 4 9 7 At2g22160 cysteine endopeptidase-related similar to cysteine endopeptidase precursor GI:2944446 from [Ricinus communis] 8 4 9 8 At2g22240 inositol-3-phosphate synthase isozyme 2 / myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2 / IPS 2 identical to SP|Q38862 Myo-inositol-1-phosphate synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS 2) {Arabidopsis thaliana} 8 4 9 9 At2g25120 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 8 4 9 10 At2g25180 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 8 4 9 11 At2g25350 phox (PX) domain-containing protein weak similarity to SP|Q9UTK5 Abnormal long morphology protein 1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam profile PF00787: PX domain 8 4 9 12 At2g25420 "transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (3 repeats)" 8 4 9 13 At2g25600 "potassium channel protein, putative similar to potassium channel [Lycopersicon esculentum] GI:8980432; member of the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+ channel family, PMID:11500563; Shaker Pollen Inward K+ Channel (SPIK) PMID:11825875" 8 4 9 14 At2g25625 expressed protein 8 4 9 15 At2g25770 expressed protein 8 4 9 16 At2g25830 YebC-related contains Pfam profile PF01709: Domain of unknown function; contains TIGRFAM TIGR01033: conserved hypothetical protein; similar to YebC (GI:5771432) [Legionella pneumophila] 8 4 9 17 At2g28450 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 8 4 9 18 At2g28510 Dof-type zinc finger domain-containing protein similar to elicitor-responsive Dof protein ERDP GI:6092016 from [Pisum sativum] 8 4 9 19 At2g28650 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit 8 4 9 20 At2g28710 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 8 4 9 21 At2g28880 "para-aminobenzoate (PABA) synthase family protein similar to PABA synthase from Streptomyces griseus [SP|P32483], Streptomyces pristinaespiralis [gi:1575336]; contains Pfam profiles PF00425: chorismate binding enzyme, PF00117: glutamine amidotransferase class-I, PF04715: Anthranilate synthase component I, N terminal region" 8 4 9 22 At2g28940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 4 9 23 At2g29125 expressed protein 8 4 9 24 At2g29190 pumilio/Puf RNA-binding domain-containing protein 8 4 9 25 At2g31862 hypothetical protein 8 4 10 1 At2g31910 "cation/hydrogen exchanger, putative similar to monovalent cation:proton antiporter family 2 (CPA2) members (see PMID:11500563 for other members)" 8 4 10 2 At2g32070 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 8 4 10 3 At2g32120 heat shock protein 70 family protein / HSP70 family protein similar to SP|P22953 Heat shock cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis thaliana}; contains InterPro accession IPR001023: Heat shock protein Hsp70 8 4 10 4 At2g32270 "zinc transporter (ZIP3) identical to zinc transporter [Arabidopsis thaliana] gi|3252870|gb|AAC24199; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 8 4 10 5 At2g32310 expressed protein 8 4 10 6 At2g32480 "membrane-associated zinc metalloprotease, putative similar to Hypothetical zinc metalloprotease All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.} Pfam PF00595: PDZ domain (Also known as DHR or GLGF); contains TIGRFAM TIGR00054: membrane-associated zinc metalloprotease, putative" 8 4 10 7 At2g32530 "cellulose synthase family protein similar to cellulose synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882]" 8 4 10 8 At2g35110 HEM protein-related weak similarity to Membrane-associated protein Hem (Dhem-2) (Swiss-Prot:P55162) [Drosophila melanogaster]; weak similarity to Nck-associated protein 1 (NAP 1) (p125Nap1) (Membrane-associated protein HEM-2) (Swiss-Prot:P55161) [Rattus norvegicus] 8 4 10 9 At2g35160 "SET domain-containing protein (SUVH5) identical to SUVH5 [Arabidopsis thaliana] GI:13517751; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH5 (SUVH5) GI:13517750" 8 4 10 10 At2g35330 "zinc finger (C3HC4-type RING finger) protein-related contains weak hit to Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger); weak similarity to RING finger protein 8 (Swiss-Prot:O76064) [Homo sapiens]" 8 4 10 11 At2g35390 "ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) identical to phosphoribosyl diphosphate synthetase 1 (ribose-phosphate pyrophosphokinase 1 (PRS I) [Arabidopsis thaliana] GI:633140, SP|Q42581" 8 4 10 12 At2g35550 expressed protein 8 4 10 13 At2g35610 expressed protein 8 4 10 14 At2g35730 heavy-metal-associated domain-containing protein contains PS1047 Heavy-metal-associated domain contains Pfam profile PF00403: Heavy-metal-associated domain 8 4 10 15 At2g35770 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II precursor (Carboxypeptidase D) (CP-MII) (SP:P08818) [Hordeum vulgare] 8 4 10 16 At2g38365 expressed protein 8 4 10 17 At2g38420 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 10 18 At2g38600 acid phosphatase class B family protein similar to acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 8 4 10 19 At2g38660 "tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P09440 C-1-tetrahydrofolate synthase, mitochondrial precursor (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3) {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" 8 4 10 20 At2g38810 "histone H2A, putative strong similarity to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 8 4 10 21 At2g38830 tumor susceptibility protein-related contains weak similarity to Swiss-Prot:Q99816 tumor susceptibility gene 101 protein [Homo sapiens] 8 4 10 22 At2g38970 "zinc finger (C3HC4-type RING finger) family protein very low similarity to SP|P97280 Inter-alpha-trypsin inhibitor heavy chain H3 precursor {Mesocricetus auratus}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 8 4 10 23 At2g39020 "GCN5-related N-acetyltransferase (GNAT) family protein similar to SP|Q9SMB8 Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl- CoA: tyramine N-hydroxycinnamoyltransferase) {Nicotiana tabacum}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 8 4 10 24 At2g41550 expressed protein 8 4 10 25 At2g41600 expressed protein 8 4 11 1 At2g41730 expressed protein 8 4 11 2 At2g41790 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain; similar to insulin-degrading enzyme (Insulysin, Insulinase, Insulin protease) [Mouse] SWISS-PROT:Q9JHR7" 8 4 11 3 At2g41940 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 8 4 11 4 At2g41990 expressed protein 8 4 11 5 At2g42140 VQ motif-containing protein contains PF05678: VQ motif 8 4 11 6 At2g42200 squamosa promoter-binding protein-like 9 (SPL9) identical to squamosa promoter binding protein-like 9 [Arabidopsis thaliana] GI:5931673; contains Pfam profile PF03110: SBP domain 8 4 11 7 At2g44810 defective in anther dehiscence1 (DAD1) identical to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 8 4 11 8 At2g44860 "60S ribosomal protein L24, putative " 8 4 11 9 At2g45010 "expressed protein weak similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 8 4 11 10 At2g45060 expressed protein 8 4 11 11 At2g45240 "methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24" 8 4 11 12 At2g45300 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase nearly identical to SP|P05466 8 4 11 13 At2g45490 "protein kinase, putative contains protein kinase domain, Pfam:PF00069; similar to protein kinase p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914" 8 4 11 14 At2g45550 cytochrome P450 family protein 8 4 11 15 At2g48140 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 8 4 11 16 At2g19340 "membrane protein, putative contains 3 transmembrane domains;" 8 4 11 17 At3g01120 "cystathionine gamma-synthase, chloroplast / O-succinylhomoserine (Thiol)-lyase (CGS) identical to SP|P55217 Cystathionine gamma-synthase, chloroplast precursor (EC 4.2.99.9) (CGS) (O-succinylhomoserine (Thiol)-lyase) {Arabidopsis thaliana}" 8 4 11 18 At3g01175 expressed protein 8 4 11 19 At3g01325 Expressed protein 8 4 11 20 At3g01370 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 8 4 11 21 At3g01510 "5'-AMP-activated protein kinase beta-1 subunit-related contains similarity to Swiss-Prot:P80387 5'-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]" 8 4 11 22 At3g01550 "triose phosphate/phosphate translocator, putative similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator [Cauliflower]{Brassica oleracea}" 8 4 11 23 At3g04140 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 8 4 11 24 At3g04200 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin type2 GB:CAA63023 [SP|P92996] [Arabidopsis thaliana]" 8 4 11 25 At3g04370 hypothetical protein contains Pfam profile PF01657: Domain of unknown function 8 4 12 1 At3g04410 hypothetical protein 8 4 12 2 At3g04590 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 8 4 12 3 At3g04620 expressed protein 8 4 12 4 At3g04770 40S ribosomal protein SA (RPSaB) identical to p40 protein homolog GB:AAB67866 [Arabidopsis thaliana]; similar to 40S ribosomal protein SA (P40) GB:O65751 [Cicer arietinum] 8 4 12 5 At3g04810 "protein kinase, putative similar to LSTK-1-like kinase [Lycopersicon esculentum] GI:15637110; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 8 4 12 6 At3g07320 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase from GI:6714534 [Salix gilgiana]" 8 4 12 7 At3g07370 tetratricopeptide repeat (TPR)-containing protein / U-box domain-containing protein similar to serologically defined colon cancer antigen 7 GB:5031963 GI:3170178 [Homo sapiens]; 8 4 12 8 At3g07520 "glutamate receptor family protein (GLR1.4) plant glutamate receptor family, PMID:11379626" 8 4 12 9 At3g07550 F-box family protein (FBL12) contains similarity to F-box protein FBL6 GI:6456737 from [Homo sapiens] 8 4 12 10 At3g07710 hypothetical protein 8 4 12 11 At3g07750 "3' exoribonuclease family domain 1-containing protein similar to SP|Q15024 Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA processing protein 42) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 8 4 12 12 At3g07900 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 8 4 12 13 At3g07930 HhH-GPD base excision DNA repair family protein 8 4 12 14 At3g10915 "reticulon family protein low similarity to rS-Rex-s [Rattus norvegicus] GI:1143717, neuroendocrine-specific protein C [Homo sapiens] GI:307311; contains Pfam profile PF02453: Reticulon" 8 4 12 15 At3g10950 60S ribosomal protein L37a (RPL37aB) similar to putative 60S ribosomal protein L37a GB:AAD28753 [Gossypium hirsutum] 8 4 12 16 At3g11080 "disease resistance family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 8 4 12 17 At3g11150 expressed protein 8 4 12 18 At3g11310 hypothetical protein 8 4 12 19 At3g11370 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 8 4 12 20 At3g11490 "rac GTPase activating protein, putative similar to rac GTPase activating protein 1 GB:AAC62624 GI:3695059 [Lotus japonicus]; contains Pfam profile PF00620: RhoGAP domain" 8 4 12 21 At3g11530 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 8 4 12 22 At3g13920 "eukaryotic translation initiation factor 4A-1 / eIF-4A-1 eIF-4A-1 gi:15293046, gi:15450485; contains Pfam profile PF00270: DEAD/DEAH box helicase; contains Pfam profile PF00271: Helicase conserved C-terminal domain" 8 4 12 23 At3g13980 expressed protein 8 4 12 24 At3g14110 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 8 4 12 25 At3g14140 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to alkB protein [Escherichia coli][SP|P05050], alkB [Caulobacter crescentus][GI:2055386]; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 8 4 13 1 At3g14270 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to SP|Q9Z1T6 FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60 chaperonin family" 8 4 13 2 At3g14330 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 13 3 At3g14480 glycine/proline-rich protein contains 1 predicted transmembrane domain; 8 4 13 4 At3g14540 terpene synthase/cyclase family protein similar to terpene synthase GB:CAA72074 from [Arabidopsis thaliana] 8 4 13 5 At3g17120 expressed protein 8 4 13 6 At3g17160 expressed protein 8 4 13 7 At3g17280 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 8 4 13 8 At3g17350 expressed protein 8 4 13 9 At3g17510 CBL-interacting protein kinase 1 (CIPK1) identical to CBL-interacting protein kinase 1 [Arabidopsis thaliana] gi|11066952|gb|AAG28776; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 1 (CIPK1) GI:11066951 8 4 13 10 At3g17550 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 8 4 13 11 At3g17690 cyclic nucleotide-binding transporter 2 / CNBT2 (CNGC19) identical to cyclic nucleotide-binding transporter 2 (CNBT2) GI:8131900 from [Arabidopsis thaliana]; member of the cyclic nucleotide-gated channel family (CNGC)- see PMID:11500563 8 4 13 12 At3g17750 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 8 4 13 13 At3g20390 endoribonuclease L-PSP family protein contains Pfam domain PF01042: Endoribonuclease L-PSP 8 4 13 14 At3g20450 expressed protein 8 4 13 15 At3g20620 "F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 8 4 13 16 At3g20680 expressed protein 8 4 13 17 At3g20840 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 8 4 13 18 At3g20890 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative similar to SP|P52597 Heterogeneous nuclear ribonucleoprotein F (hnRNP F) {Homo sapiens}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 8 4 13 19 At3g21120 "F-box family protein similar to GP:20197985 F-box protein family, AtFBX9 (GP:20197985) {Arabidopsis thaliana}; contains weak hit to Pfam PF00646: F-box domain" 8 4 13 20 At3g21175 zinc finger (GATA type) family protein similar to zinc finger protein ZIM gi:8918533 from [Arabidopsis thaliana]; contains Pfam PF00320: GATA zinc finger 8 4 13 21 At3g23850 hypothetical protein 8 4 13 22 At3g23910 expressed protein 8 4 13 23 At3g24080 KRR1 family protein contains Pfam PF05178: Krr1 family 8 4 13 24 At3g24120 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 8 4 13 25 At3g24280 expressed protein 8 4 14 1 At3g24330 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 8 4 14 2 At3g24510 expressed protein 8 4 14 3 At3g24540 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 4 14 4 At3g27300 glucose-6-phosphate 1-dehydrogenase / G6PD (ACG9) identical to glucose-6-phosphate 1-dehydrogenase (acg9) [Arabidopsis thaliana] GI:5732195 8 4 14 5 At3g27350 expressed protein 8 4 14 6 At3g27510 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 4 14 7 At3g27570 expressed protein 8 4 14 8 At3g27750 expressed protein 8 4 14 9 At3g27830 "50S ribosomal protein L12-1, chloroplast (CL12-A) identical to ribosomal protein L12 GB:X68046 [Arabidopsis thaliana] (J. Biol. Chem. 269 (10), 7330-7336 (1994))" 8 4 14 10 At3g28007 nodulin MtN3 family protein contains Pfam PF03083 MtN3/saliva family; similar to LIM7 GI:431154 (induced in meiotic prophase in lily microsporocytes) from [Lilium longiflorum] 8 4 14 11 At3g28060 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 8 4 14 12 At3g32260 hypothetical protein 8 4 14 13 At3g32410 transcriptional repressor-related contains weak similarity to Swiss-Prot:Q9Y4X4 krueppel-like factor 12 (Transcriptional repressor AP-2rep) (HSPC122) [Homo sapiens] 8 4 14 14 At3g33494 hypothetical protein 8 4 14 15 At3g42050 vacuolar ATP synthase subunit H family protein identical to probable vacuolar ATP synthase subunit H (EC 3.6.3.14)(V-ATPase H subunit) (Vacuolar proton pump H subunit) (Vacuolar proton pump subunit SFD) SP:Q9LX65 from [Arabidopsis thaliana]; contains Pfam PF03224: V-ATPase subunit H 8 4 14 16 At3g42240 hypothetical protein 8 4 14 17 At3g42330 hypothetical protein 8 4 14 18 At3g42540 hypothetical protein 8 4 14 19 At3g42590 "hypothetical protein similar to At2g16170, At2g06640, At2g12110, At2g12100, At2g05460" 8 4 14 20 At3g45700 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 8 4 14 21 At3g45755 hypothetical protein 8 4 14 22 At3g45920 receptor protein kinase-related similar to light repressible receptor protein kinase GI:1321686 from [Arabidopsis thaliana] 8 4 14 23 At3g45980 histone H2B identical to histone H2B Arabidopsis thaliana GI:2407802; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4 8 4 14 24 At3g46160 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 8 4 14 25 At3g46220 expressed protein 8 4 15 1 At3g46410 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 4 15 2 At3g46470 hypothetical protein 8 4 15 3 At3g49260 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 8 4 15 4 At3g49307 Expressed protein 8 4 15 5 At3g49480 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 8 4 15 6 At3g49540 expressed protein 8 4 15 7 At3g49720 expressed protein 8 4 15 8 At3g49780 phytosulfokines 3 (PSK3) identical to phytosulfokines 3 (PSK3) SP:Q9M2Y0 from [Arabidopsis thaliana] 8 4 15 9 At3g49960 "peroxidase, putative identical to peroxidase ATP21a [Arabidopsis thaliana] gi|1546696|emb|CAA67339" 8 4 15 10 At3g50020 "serine protease inhibitor, potato inhibitor I-type family protein contains Pfam profile PF00280: Potato inhibitor I family" 8 4 15 11 At3g52720 carbonic anhydrase family protein low similarity to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 8 4 15 12 At3g52760 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 8 4 15 13 At3g52920 expressed protein weak similarity to enterophilin-2L [Cavia porcellus] GI:12718845; contains Pfam profile PF04949: Family of unknown function (DUF662) 8 4 15 14 At3g52940 C-14 sterol reductase / delta(14)-sterol reductase / FACKEL (FK) identical to gi:9082182 8 4 15 15 At3g53120 expressed protein 8 4 15 16 At3g53180 "glutamine synthetase, putative similar to glutamine synthetase (glutamate--ammonia ligase) [Bacillus subtilis] SWISS-PROT:P12425" 8 4 15 17 At3g53320 expressed protein 8 4 15 18 At3g53370 DNA-binding S1FA family protein contains Pfam profile: PF04689 DNA binding protein S1FA 8 4 15 19 At3g55970 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to leucoanthocyanidin dioxygenase, Malus domestica, SP|P51091; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 8 4 15 20 At3g56030 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 4 15 21 At3g56190 alpha-soluble NSF attachment protein 2 / alpha-SNAP2 / ASNAP2 identical to alpha-soluble NSF attachment protein 2 / alpha-SNAP2 SP:Q9SPE6 from [Arabidopsis thaliana] 8 4 15 22 At3g56250 expressed protein 8 4 15 23 At3g56430 "expressed protein unknown protein At2g40800 - Arabidopsis thaliana, EMBL:AC007660" 8 4 15 24 At3g56490 "zinc-binding protein, putative / protein kinase C inhibitor, putative similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor, PKCI) [Zea mays] Swiss-Prot:P42856" 8 4 15 25 At3g56670 hypothetical protein hypothetical proteins - Arabidopsis thaliana 8 4 16 1 At3g56730 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 8 4 16 2 At3g59540 "60S ribosomal protein L38 (RPL38B) 60S RIBOSOMAL PROTEIN L38 - Lycopersicon esculentum, EMBL:X69979" 8 4 16 3 At3g59610 F-box family protein / jacalin lectin family protein contains Pfam profile PF01419: Jacalin-like lectin domain 8 4 16 4 At3g59760 "cysteine synthase, mitochondrial, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to SP|Q43725 Cysteine synthase, mitochondrial precursor (EC 4.2.99.8) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}" 8 4 16 5 At3g59820 calcium-binding mitochondrial protein-related contains weak similarity to Calcium-binding mitochondrial protein Anon-60Da (Swiss-Prot:P91927) [Drosophila melanogaster] 8 4 16 6 At3g59970 methylenetetrahydrofolate reductase 1 (MTHFR1) identical to methylenetetrahydrofolate reductase MTHFR1 [Arabidopsis thaliana] GI:5911425 8 4 16 7 At3g60020 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At5), putative E3 ubiquitin ligase; similar to Skp1 GI:4959710 from [Medicago sativa]" 8 4 16 8 At3g60190 "dynamin-like protein E (DL1E) nearly identical to dynamin-like protein E [Arabidopsis thaliana] GI:19423872; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 8 4 16 9 At3g60245 60S ribosomal protein L37a (RPL37aC) 8 4 16 10 At3g62970 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 8 4 16 11 At3g63030 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 8 4 16 12 At3g63210 expressed protein identical to senescence-associated protein SAG102 (GI::22331931) [Arabidopsis thaliana] (unpublished); contains Pfam profile PF04570: Protein of unknown function (DUF581) 8 4 16 13 At3g63250 homocysteine S-methyltransferase 2 (HMT-2) 99.7% identical to homocysteine S-methyltransferase AtHMT-2 (GI:6685163) [Arabidopsis thaliana] 8 4 16 14 At3g63380 "calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) identical to SP|Q9LY77 Potential calcium-transporting ATPase 12, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12) {Arabidopsis thaliana}; similar to SP|Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca2+-ATPase, isoform 8) {Arabidopsis thaliana}; contains InterPro Accession IPR006069: Cation transporting ATPase" 8 4 16 15 At3g63420 heterotrimeric G protein gamma-subunit (AGG1) 8 4 16 16 At4g00040 "chalcone and stilbene synthase family protein similar to chalcone synthase homolog PrChS1, Pinus radiata, gb:U90341; similar to anther-specific protein [Nicotiana sylvestris][GI:2326774], YY2 protein [Oryza sativa][GI:2645170]" 8 4 16 17 At4g00090 transducin family protein / WD-40 repeat family protein similar to Transducin beta-like 2 protein (WS beta-transducin repeats protein) (WS-betaTRP) (Williams-Beuren syndrome chromosome region 13 protein) (SP:Q9Y4P3) {Homo sapiens} 8 4 16 18 At4g02450 glycine-rich protein similar to several proteins containing a tandem repeat region such as Plasmodium falciparum GGM tandem repeat protein (GB:U27807) 8 4 16 19 At4g02500 "galactosyl transferase GMA12/MNN10 family protein low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 8 4 16 20 At4g02650 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Chain A, Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2 Complex (GP:13399999) {Homo sapiens}; supporting cDNA gi|26451912|dbj|AK118440.1|" 8 4 16 21 At4g02710 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 8 4 16 22 At4g02870 expressed protein 8 4 16 23 At4g02920 expressed protein 8 4 16 24 At4g03100 "rac GTPase activating protein, putative similar to rac GTPase activating protein 3 [Lotus japonicus] GI:3695063; contains Pfam profile PF00620: RhoGAP domain" 8 4 16 25 At4g03130 "BRCT domain-containing protein contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 8 4 17 1 At4g07825 expressed protein this may be a pseudogene. A long ORF is frameshifted. 8 4 17 2 At4g07950 "DNA-directed RNA polymerase III family protein similar to SP|Q9Y2Y1 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III C11 subunit) {Homo sapiens}; contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS)" 8 4 17 3 At4g08180 "oxysterol-binding family protein similar to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 8 4 17 4 At4g08230 glycine-rich protein 8 4 17 5 At4g08370 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 8 4 17 6 At4g08430 "Ulp1 protease family protein similar to At5g45570, At5g28235; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 8 4 17 7 At4g08620 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:3777483 8 4 17 8 At4g08685 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 8 4 17 9 At4g11490 protein kinase family protein contains Pfam PF00069: Protein kinase domain 8 4 17 10 At4g11570 haloacid dehalogenase-like hydrolase family protein similar to genetic modifier [Zea mays] GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 8 4 17 11 At4g11745 kelch repeat-containing protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF01344: Kelch motif 8 4 17 12 At4g11800 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 8 4 17 13 At4g11970 YT521-B-like family protein contains Pfam profile PF04146: YT521-B-like family 8 4 17 14 At4g12005 expressed protein 8 4 17 15 At4g12190 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 8 4 17 16 At4g12250 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 8 4 17 17 At4g14750 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 8 4 17 18 At4g14805 protease inhibitor/seed storage/lipid transfer protein (LTP)-related weak hit to Pfam PF00234: Protease inhibitor/seed storage/LTP family 8 4 17 19 At4g14950 expressed protein 8 4 17 20 At4g14980 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 8 4 17 21 At4g15110 "cytochrome P450 97B3, putative (CYP97B3) identical to Cytochrome P450 97B3 (SP:O23365) [Arabidopsis thaliana]" 8 4 17 22 At4g15180 SET domain-containing protein contains Pfam profile PF00856: SET domain 8 4 17 23 At4g15330 cytochrome P450 family protein 8 4 17 24 At4g15390 "transferase family protein similar to alcohol acyltransferase [Fragaria x ananassa][GI:10121328][PMID:10810141], deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034]" 8 4 17 25 At4g17850 hypothetical protein 8 4 18 1 At4g17900 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 8 4 18 2 At4g18050 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter; similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] 8 4 18 3 At4g18100 "60S ribosomal protein L32 (RPL32A) ribosomal protein L32, human, PIR1:R5HU32" 8 4 18 4 At4g18280 "glycine-rich cell wall protein-related glycine-rich protein 1.0 precursor, Phaseolus vulgaris, PIR1:S01821" 8 4 18 5 At4g18330 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site." 8 4 18 6 At4g18440 "adenylosuccinate lyase, putative / adenylosuccinase, putative similar to SP|P25739 Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) {Escherichia coli}; contains Pfam profile PF00206: Lyase" 8 4 18 7 At4g18490 hypothetical protein 8 4 18 8 At4g21270 kinesin-like protein A (KATA) 8 4 18 9 At4g21326 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 8 4 18 10 At4g21480 "glucose transporter, putative similar to glucose transporter (Sugar carrier) STP1, Arabidopsis thaliana, SP|P23586; contains Pfam profile PF00083: major facilitator superfamily protein" 8 4 18 11 At4g21540 "diacylglycerol kinase family protein contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 8 4 18 12 At4g21690 "gibberellin 3 beta-hydroxylase family protein similar to gibberellin 3 beta-hydroxylase [GI:4164145][Lactuca sativa], 3b-hydroxylase, Solanum lycopersicum, AB010992; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 8 4 18 13 At4g21750 "L1 specific homeobox gene (ML1) / ovule-specific homeobox protein A20 nearly identical to meristem L1 layer homeobox protein A20 (AtML1) [Arabidopsis thaliana] GI:1881536, protodermal factor2 (PDF2) [Arabidopsis thaliana] GI:14276060" 8 4 18 14 At4g21900 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: MatE 8 4 18 15 At4g21950 hypothetical protein 8 4 18 16 At4g24490 geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related low similarity to SP|Q08602 [Rattus norvegicus] 8 4 18 17 At4g24550 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 8 4 18 18 At4g24700 expressed protein 8 4 18 19 At4g24740 protein kinase (AFC2) identical to protein kinase AFC2 [Arabidopsis thaliana] SWISS-PROT:P51567 8 4 18 20 At4g24920 "protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans]" 8 4 18 21 At4g24972 expressed protein 8 4 18 22 At4g25130 "peptide methionine sulfoxide reductase, putative strong similarity to SP|P54151 Peptide methionine sulfoxide reductase (EC 1.8.4.6) {Brassica napus}; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase" 8 4 18 23 At4g25190 hypothetical protein contains Pfam profile: PF04484 family of unknown function (DUF566) 8 4 18 24 At4g27740 "yippee family protein similar to qdgl-1 [Coturnix coturnix] GI:10441650, Yippee protein [Homo sapiens] GI:5713281; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 8 4 18 25 At4g27800 protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1) identical to SP|P49599|P2C3_ARATH Protein phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis thaliana}; similar to protein phosphatase-2C; PP2C (GI:3643090) [Mesembryanthemum crystallinum] 8 4 19 1 At4g27950 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6, Lycopersicon esculentum, gb:U89257" 8 4 19 2 At4g28000 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 8 4 19 3 At4g28150 expressed protein 8 4 19 4 At4g28190 expressed protein 8 4 19 5 At4g28350 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 8 4 19 6 At4g28395 "lipid transfer protein, putative identical to anther-specific gene ATA7 [gi:2746339]; contains Pfam protease inhibitor/seed storage/LTP family domain" 8 4 19 7 At4g30996 expressed protein 8 4 19 8 At4g31030 expressed protein 8 4 19 9 At4g31160 "transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343" 8 4 19 10 At4g31240 expressed protein 8 4 19 11 At4g31420 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 8 4 19 12 At4g31460 "ribosomal protein L28 family protein ribosomal protein YmL14 precursor, mitochondrial - Saccharomyces cerevisiae,PIR2:S50921" 8 4 19 13 At4g31610 transcriptional factor B3 family protein / reproductive meristem protein 1 (REM1) similar to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424; contains Pfam profile PF02362: B3 DNA binding domain; identical to cDNA reproductive meristem protein 1 (REM1) GI:13604226 8 4 19 14 At4g31660 transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424; contains Pfam profile PF02362: B3 DNA binding domain 8 4 19 15 At4g34160 cyclin delta-3 (CYCD3) identical to SP|P42753 Cyclin delta-3 {Arabidopsis thaliana} 8 4 19 16 At4g34215 expressed protein 8 4 19 17 At4g34330 "expressed protein similar to At14a, GI:11994571 and GI:11994573 [Arabidopsis thaliana];; expression supported by MPSS" 8 4 19 18 At4g34390 "extra-large guanine nucleotide binding protein, putative / G-protein, putative similar to extra-large G-protein (XLG) [Arabidopsis thaliana] GI:3201680; contains Pfam profile PF00503: G-protein alpha subunit" 8 4 19 19 At4g34550 expressed protein 8 4 19 20 At4g34600 expressed protein 8 4 19 21 At4g34780 auxin-responsive family protein similar to small auxin up RNA (SAUR-AC1) (SP:S70188) [Arabidopsis thaliana] 8 4 19 22 At4g34840 nucleosidase-related contains weak similarity to MTA/SAH nucleosidase (Swiss-Prot:O51931) [Buchnera aphidicola] 8 4 19 23 AT5G57480 PC-1 D05 8 4 19 24 3XSSC PC-1 D17 8 4 19 25 AT1G29930 PC-1 H05 8 4 20 1 3XSSC PC-1 H17 8 4 20 2 AT3G44150 PC-1 L05 8 4 20 3 3XSSC PC-1 L17 8 4 20 4 AT4G00810 PC-1 P05 8 4 20 5 3XSSC PC-1 P17 8 4 20 6 At4g37460 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 8 4 20 7 At4g37520 peroxidase 50 (PER50) (P50) (PRXR2) identical to SP|Q43731 Peroxidase 50 precursor (EC 1.11.1.7) (Atperox P50) (PRXR2) (ATP9a)] {Arabidopsis thaliana} 8 4 20 8 At4g37685 hypothetical protein 8 4 20 9 At4g37740 expressed protein identical to transcription activator GRL2 [Arabidopsis thaliana] GI:21539882 (unpublished); supporting cDNA gi|21539881|gb|AY102635.1| 8 4 20 10 At4g37920 expressed protein 8 4 20 11 At4g37990 "mannitol dehydrogenase, putative (ELI3-2) identical to GI:16269" 8 4 20 12 At4g38130 histone deacetylase (RPD3A) identical to SP|O22446 Histone deacetylase (HD) {Arabidopsis thaliana} 8 4 20 13 At4g38170 "far-red impaired responsive protein, putative / SWIM zinc finger family protein similar to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF04434: SWIM zinc finger" 8 4 20 14 At5g01590 expressed protein 8 4 20 15 At5g01640 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 8 4 20 16 At5g01780 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to alkB protein - Escherichia coli, PIR:BVECKB, alkB [Caulobacter crescentus][GI:2055386]; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 8 4 20 17 At5g01840 ovate family protein 59% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 8 4 20 18 At5g02020 expressed protein 8 4 20 19 At5g02040 prenylated rab acceptor (PRA1) family protein contains Pfam PF03208: PRA1 family protein 8 4 20 20 At5g02220 expressed protein 8 4 20 21 At5g02270 "ABC transporter family protein NBD-like protein POP, Arabidopsis thaliana, EMBL:AF127664" 8 4 20 22 At5g05000 "translocate of chloroplast 34 (TOC34) / GTP-binding protein (OEP34) contains Pfam PF04548: AIG1 family;contains TIGRFAM TIGR00991: GTP-binding protein and TIGR00231: small GTP-binding protein domain; 99.7% identical to atToc34 protein (GI:11557975) [Arabidopsis thaliana]; similar to Chain A, Pea Toc34 - A Novel Gtpase Of The Chloroplast Protein Translocon (GI:1865556) [Pisum sativum]; almost identical to SP:Q38906 Translocase of chloroplast 34; identical to cDNA GTP-binding protein (OEP34) GI:1151243" 8 4 20 23 At5g05050 peptidase C1A papain family protein weak similarity to berghepain-2 [Plasmodium berghei] GI:17978639; contains Pfam profile PF00112: Papain family cysteine protease 8 4 20 24 At5g05230 expressed protein 8 4 20 25 At5g05290 "expansin, putative (EXP2) identical to expansin At-EXP2 [Arabidopsis thaliana] gi|1041708|gb|AAB38073; alpha-expansin gene family, PMID:11641069" 8 4 21 1 At5g05420 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative contains similarity to peptidyl-prolyl cis-trans isomerase" 8 4 21 2 At5g05480 expressed protein 8 4 21 3 At5g05610 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 8 4 21 4 At5g05657 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to hin1 (GP:1619321) {Nicotiana tabacum}; confirmed by cDNA sequence Ceres:19481; confirmed by cDNA sequence Ceres:8166 non-consensus donor splice site (AC) at the exon|intron boundary at 9522; non-consensus acceptor splice site (At) at the intron|exon boundary at 9724; non-consensus donor splice site (GC) at the exon|intron boundary at 10302; non-consensus acceptor splice site (TC) at the intron|exon boundary at 10342; confirmed by cDNA sequence Ceres:8166 8 4 21 5 At5g08330 "TCP family transcription factor, putative similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440) Oryza sativa] ; auxin-induced basic helix-loop-helix transcription factor, Gossypium hirsutum, EMBL:AF165924" 8 4 21 6 At5g08360 expressed protein 8 4 21 7 At5g08510 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 21 8 At5g08540 expressed protein similar to unknown protein (pir||T27191) 8 4 21 9 At5g08720 expressed protein 8 4 21 10 At5g08790 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 8 4 21 11 At5g09300 "2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative similar to branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Gallus gallus] GI:12964598; contains Pfam profile PF00676: Dehydrogenase E1 component" 8 4 21 12 At5g09360 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201] 8 4 21 13 At5g12110 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) identical to elongation factor 1B alpha-subunit [Arabidopsis thaliana] GI:6686819 8 4 21 14 At5g12170 expressed protein similar to unknown protein (pir||T09909) 8 4 21 15 At5g12330 lateral root primordium 1 (LRP1) identical to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 8 4 21 16 At5g12370 exocyst complex component Sec10-related low similarity to SP|O00471 Exocyst complex component Sec10 (hSec10) {Homo sapiens} 8 4 21 17 At5g12890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 8 4 21 18 At5g12950 "expressed protein putative secreted protein SCF41.30c, Streptomyces coelicolor, EMBL:SCF41_30" 8 4 21 19 At5g13140 expressed protein 8 4 21 20 At5g13200 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 8 4 21 21 At5g15920 "structural maintenance of chromosomes (SMC) family protein (MSS2) similar to SMC-related protein MSS2 [Arabidopsis thaliana] GI:9965743; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain" 8 4 21 22 At5g15980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 8 4 21 23 At5g16160 expressed protein 8 4 21 24 At5g16220 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein hypothetical proteins - Arabidopsis thaliana contains Pfam profile PF00564: PB1 domain 8 4 21 25 At5g16360 "NC domain-containing protein contains Pfam domain, PF04970: NC domain" 8 4 22 1 At5g16400 "thioredoxin, putative similar to SP|P29450 Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum sativum}; contains Pfam profile: PF00085 Thioredoxin" 8 4 22 2 At5g16570 "glutamine synthetase, putative similar to glutamine synthetase, cytosolic isozyme (glutamate-- ammonia ligase) [Alfalfa] SWISS-PROT:P04078" 8 4 22 3 At5g16620 "hydroxyproline-rich glycoprotein family protein contains proline rich extensin domains, INTERPRO:IPR002965" 8 4 22 4 At5g19200 short-chain dehydrogenase/reductase (SDR) family protein similar to follicular variant translocation protein 1 precursor (FVT-1) SP:Q06136 from [Homo sapiens] 8 4 22 5 At5g19240 expressed protein 8 4 22 6 At5g19390 "pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein weak similarity to rho-GTPase activating protein [Homo sapiens] GI:14245732; contains Pfam profiles PF00169: PH domain, PF00620: RhoGAP domain" 8 4 22 7 At5g19450 calcium-dependent protein kinase 19 (CDPK19) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655 8 4 22 8 At5g19620 "outer membrane OMP85 family protein weak similarity to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607; contains Pfam profile PF01103: outer membrane protein, OMP85 family" 8 4 22 9 At5g19680 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 8 4 22 10 At5g19855 expressed protein 8 4 22 11 At5g19900 "PRLI-interacting factor, putative strong similarity to PRLI-interacting factor A [Arabidopsis thaliana] GI:11139262" 8 4 22 12 At5g23220 "isochorismatase hydrolase family protein low similarity to SP|P45743Isochorismatase (EC 3.3.2.1) (2,3 dihydro-2,3 dihydroxybenzoate synthase) (Superoxide-inducible protein) (SOI1) {Bacillus subtilis}; contains Pfam profile PF00857: isochorismatase family protein" 8 4 22 13 At5g23260 "MADS-box protein, putative " 8 4 22 14 At5g23405 high mobility group (HMG1/2) family protein contains Pfam profile PF00505: HMG (high mobility group) box 8 4 22 15 At5g23440 "ferredoxin-thioredoxin reductase, putative similar to ferredoxin-thioredoxin reductase, variable chain (FTR-V, Ferredoxin- thioredoxin reductase subunit A, FTR-A) [Zea mays] SWISS-PROT:P80680" 8 4 22 16 At5g23630 "ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy protein similar to SP|O14072 Cation-transporting ATPase 4 (EC 3.6.3.-) {Schizosaccharomyces pombe}; contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profile PF00702: haloacid dehalogenase-like hydrolase" 8 4 22 17 At5g23690 polynucleotide adenylyltransferase family protein low similarity to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 8 4 22 18 At5g23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 8 4 22 19 At5g23880 cleavage and polyadenylation specificity factor identical to cleavage and polyadenylation specificity factor [Arabidopsis thaliana] SWISS-PROT:Q9LKF9 8 4 22 20 At5g26610 D111/G-patch domain-containing protein contains Pfam PF01585: G-patch domain 8 4 22 21 At5g26580 "MADS-box protein (AGL34) MADS box protein EGM1, Eucalyptus grandis, EMBL:AF029975; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain)" 8 4 22 22 At5g26890 hypothetical protein 8 4 22 23 At5g26950 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL93 8 4 22 24 At5g27140 "SAR DNA-binding protein, putative strong similarity to SAR DNA-binding protein-1 [Pisum sativum] GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain" 8 4 22 25 At5g27210 expressed protein weak similarity to seven transmembrane domain orphan receptor [Mus musculus] GI:4321619 8 4 23 1 At5g27400 expressed protein hypothetical proteins - different species 8 4 23 2 At5g27460 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 8 4 23 3 At5g35520 kinetochore protein-related contains Pfam PF05859: Mis12 protein 8 4 23 4 At5g35570 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 8 4 23 5 At5g35690 expressed protein 8 4 23 6 At5g35735 auxin-responsive family protein similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana] 8 4 23 7 At5g35900 LOB domain family protein / lateral organ boundaries domain family protein (LBD35) identical to SP|Q9FFL3 Putative LOB domain protein 35 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 8 4 23 8 At5g35945 hypothetical protein 8 4 23 9 At5g36110 cytochrome P450 family protein similar to taxane 13-alpha-hydroxylase (GI:17148242) {Taxus cuspidata}; contains Pfam profile: PF00067: Cytochrome P450 8 4 23 10 At5g36170 "peptide chain release factor, putative similar to SP|P28367 Peptide chain release factor 2 (RF-2) {Bacillus subtilis}; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 8 4 23 11 At5g39380 calmodulin-binding protein-related has weak similarity to calmodulin-binding proteins 8 4 23 12 At5g39440 "Snf1-related protein kinase, putative similar to SNF1-related protein kinase KIN10 (EC 2.7.1.-) (AKIN10) [Arabidopsis thaliana] SWISS-PROT:Q38997" 8 4 23 13 At5g39620 "Ras-related GTP-binding protein, putative similar to GTP-binding protein RAB7A GI:1370182 from [Lotus japonicus]" 8 4 23 14 At5g39680 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 8 4 23 15 At5g39850 "40S ribosomal protein S9 (RPS9C) 40S ribosomal protein S9 - Chlamydomonas sp.,EMBL:AU066528" 8 4 23 16 At5g39900 "GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374" 8 4 23 17 At5g40080 "60S ribosomal protein-related contains weak similarity to 60S ribosomal protein L27, mitochondrial precursor (YmL27) (Swiss-Prot:P36526) [Saccharomyces cerevisiae]" 8 4 23 18 At5g40150 "peroxidase, putative identical to peroxidase ATP26a {Arabidopsis thaliana} GP|1890317|emb|CAA72487" 8 4 23 19 At5g42880 hypothetical protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827) 8 4 23 20 At5g42910 "basic leucine zipper transcription factor (BZIP15) identical to cDNA basic leucine zipper transcription factor (atbzip15 gene) GI:18656050, basic leucine zipper transcription factor [Arabidopsis thaliana] GI:18656051; contains Pfam profile PF00170: bZIP transcription factor" 8 4 23 21 At5g43050 expressed protein contains Pfam profile PF04483: Protein of unknown function (DUF565) 8 4 23 22 At5g43110 pumilio/Puf RNA-binding domain-containing protein contains similarity to RNA-binding protein 8 4 23 23 At5g43270 squamosa promoter-binding protein-like 2 (SPL2) identical to squamosa promoter binding protein-like 2 [Arabidopsis thaliana] GI:5931645; contains Pfam profile PF03110: SBP domain 8 4 23 24 At5g43330 "malate dehydrogenase, cytosolic, putative strong similarity to cytosolic malate dehydrogenase (EC 1.1.1.37) SP|O24047 {Mesembryanthemum crystallinum}, SP|O48905 {Medicago sativa}, [Prunus persica] GI:15982948; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 8 4 23 25 At5g43470 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to RPP8" 8 4 24 1 At5g43530 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 8 4 24 2 At5g46110 "phosphate/triose-phosphate translocator, putative identical to phosphate/triose-phosphate translocator precursor [Arabidopsis thaliana] gi|3983125|gb|AAC83815; similar to triose phosphate/phosphate translocator, chloroplast precursor (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177" 8 4 24 3 At5g46150 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:835763; GI:4966357; GI:4585976; GI:11994416 from [Arabidopsis thaliana] 8 4 24 4 At5g46280 "DNA replication licensing factor, putative similar to SP|Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family" 8 4 24 5 At5g46330 "leucine-rich repeat transmembrane protein kinase, putative " 8 4 24 6 At5g46490 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 8 4 24 7 At5g46540 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter; similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] 8 4 24 8 At5g46700 "senescence-associated protein, putative similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855" 8 4 24 9 At5g46760 basic helix-loop-helix (bHLH) family protein 8 4 24 10 At5g49390 hypothetical protein 8 4 24 11 At5g49450 bZIP family transcription factor similar to bZIP transcription factor GI:1769891 from [Arabidopsis thaliana] 8 4 24 12 At5g49590 hypothetical protein similar to unknown protein (pir||T02348) 8 4 24 13 At5g49650 "xylulose kinase, putative similar to D-xylulokinase [Pichia stipitis] gi|8100400|gb|AAF72328" 8 4 24 14 At5g49780 "leucine-rich repeat transmembrane protein kinase, putative " 8 4 24 15 At5g49840 "ATP-dependent Clp protease ATP-binding subunit ClpX, putative similar to CLP protease regulatory subunit CLPX GI:2674203 from [Arabidopsis thaliana]; non-consensus splice donor GC at exon 4; non-consensus splice donor AA at exon 7" 8 4 24 16 At5g50000 "protein kinase, putative similar to protein kinase ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 8 4 24 17 At5g50060 invertase/pectin methylesterase inhibitor family protein low similarity to pollen-specific protein Bnm1 [Brassica napus] GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 8 4 24 18 At5g52810 ornithine cyclodeaminase/mu-crystallin family protein contains Pfam PF02423: Ornithine cyclodeaminase/mu-crystallin family 8 4 24 19 At5g52870 expressed protein similar to unknown protein (gb|AAF24565.1) 8 4 24 20 At5g53030 expressed protein 8 4 24 21 At5g53060 KH domain-containing protein 8 4 24 22 At5g53230 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 8 4 24 23 At5g53290 "AP2 domain-containing transcription factor, putative contains similarity to pathogenesis-related genes transcriptional activator" 8 4 24 24 At5g53460 "glutamate synthase [NADH], chloroplast, putative similar to SP|Q03460 Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH- GOGAT) {Medicago sativa}" 8 4 24 25 At5g53510 "oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}, oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 8 4 25 1 At5g56180 "actin-related protein, putative (ARP8) strong similarity to actin-related protein 8A (ARP8) [Arabidopsis thaliana] GI:21427473; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427470|gb|AF507916.1|" 8 4 25 2 At5g56230 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 8 4 25 3 At5g56390 F-box family protein contains F-box domain Pfam:PF00646 8 4 25 4 At5g56450 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 8 4 25 5 At5g56630 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 8 4 25 6 At5g56690 F-box family protein contains F-box domain Pfam:PF00646 8 4 25 7 At5g56870 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor GI:3869280 from [Carica papaya]" 8 4 25 8 At5g56920 expressed protein 8 4 25 9 At5g59440 thymidylate kinase family protein similar to thymidylate kinase GI:291900 8 4 25 10 At5g59480 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 8 4 25 11 At5g59660 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 8 4 25 12 At5g59720 18.1 kDa class I heat shock protein (HSP18.1-CI) identical to 18.2 kDa class I heat shock protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana]; contains Pfam profile: PF00011 Hsp20/alpha crystallin family 8 4 25 13 At5g59870 "histone H2A, putative similar to histone H2A Petroselinum crispum SP|P19177, Lycopersicon esculentum SP|P25469, Zea mays SP|P40280; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 8 4 25 14 At5g59890 actin-depolymerizing factor 4 (ADF4) identical to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana} 8 4 25 15 At5g60050 PRLI-interacting factor-related contains weak similarity to PRLI-interacting factor G (GI:11139264) [Arabidopsis thaliana] 8 4 25 16 At5g60110 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 8 4 25 17 At5g62770 expressed protein 8 4 25 18 At5g62830 "F-box family protein-related similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 8 4 25 19 At5g63000 expressed protein 8 4 25 20 At5g63040 expressed protein similar to unknown protein (emb|CAB81845.1) 8 4 25 21 At5g63170 "GDSL-motif lipase, putative contains PF00657: Lipase/Acylhydrolase with GDSL-like motif; similar to family II lipase EXL4 (GI:15054388) [Arabidopsis thaliana]" 8 4 25 22 At5g63240 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 8 4 25 23 At5g63440 "expressed protein contains Pfam PF02594: Uncharacterized ACR, YggU family COG1872" 8 4 25 24 At5g63460 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 8 4 25 25 At5g66005 Expressed protein 8 4 26 1 At5g66040 senescence-associated family protein almost identical to ketoconazole resistant protein GI:928938 from [Arabidopsis thaliana] full-length cDNA: Ceres:101608. 8 4 26 2 At5g66130 cell cycle checkpoint protein-related weak similarity to cell cycle checkpoint protein RAD17 [Homo sapiens] GI:4102916 8 4 26 3 At5g66180 expressed protein 8 4 26 4 At5g66310 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 8 4 26 5 At5g66350 "zinc finger protein, putative (SHI) similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702); identical to cDNA putative zinc finger protein SHI (SHI) GI:4929802" 8 4 26 6 At5g66510 bacterial transferase hexapeptide repeat-containing protein contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats) 8 4 26 7 At5g66570 "oxygen-evolving enhancer protein 1-1, chloroplast / 33 kDa subunit of oxygen evolving system of photosystem II (PSBO1) (PSBO) identical to SP:P23321 Oxygen-evolving enhancer protein 1-1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) [Arabidopsis thaliana]" 8 4 26 8 3xSSC 3xSSC 8 4 26 9 3xSSC 3xSSC 8 4 26 10 3xSSC 3xSSC 8 4 26 11 3xSSC 3xSSC 8 4 26 12 3xSSC 3xSSC 8 4 26 13 3xSSC 3xSSC 8 4 26 14 3xSSC 3xSSC 8 4 26 15 3xSSC 3xSSC 8 4 26 16 At3g45700 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 8 4 26 17 At3g45755 hypothetical protein 8 4 26 18 At3g45920 receptor protein kinase-related similar to light repressible receptor protein kinase GI:1321686 from [Arabidopsis thaliana] 8 4 26 19 At3g45980 histone H2B identical to histone H2B Arabidopsis thaliana GI:2407802; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4 8 4 26 20 At3g46160 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 8 4 26 21 At3g46220 expressed protein 8 4 26 22 At3g46410 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 8 4 26 23 At3g46470 hypothetical protein 8 4 26 24 Blank Blank 8 4 26 25 Blank Blank 9 1 1 1 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 9 1 1 2 At5g46430 60S ribosomal protein L32 (RPL32B) 9 1 1 3 Alien1 Control: Stratagene Spotreport Alien Oligo 9 1 1 4 Alien7 Control: Stratagene Spotreport Alien Oligo 9 1 1 5 atc03 Randomly generated negative control 9 1 1 6 atc09 Randomly generated negative control 9 1 1 7 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 9 1 1 8 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 9 1 1 9 At1g01910 "anion-transporting ATPase, putative similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase" 9 1 1 10 At1g01970 pentatricopeptide (PPR) repeat-containing protein low similarity to 67 kD chloroplastic RNA-binding protein RSP67.2 [Raphanus sativus] GI:9755888; contains Pfam profile PF01535: PPR repeat 9 1 1 11 At1g02090 "COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii [Arabidopsis thaliana] GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced" 9 1 1 12 At1g02110 "proline-rich family protein contains proline-rich domain, INTERPRO:IPR000694" 9 1 1 13 At1g02270 "endonuclease/exonuclease/phosphatase family protein / calcium-binding EF hand family protein contains Pfam profiles: PF03372 endonuclease/exonuclease/phosphatase family, PF00036 EF hand" 9 1 1 14 At1g02320 hypothetical protein 9 1 1 15 At1g02490 hypothetical protein 9 1 1 16 At1g02550 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q43867; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 9 1 1 17 At1g05170 galactosyltransferase family protein 9 1 1 18 At1g05210 expressed protein 9 1 1 19 At1g05380 "PHD finger transcription factor, putative " 9 1 1 20 At1g05440 expressed protein ; expression supported by MPSS 9 1 1 21 At1g05580 "cation/hydrogen exchanger, putative (CHX23) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 9 1 1 22 At1g05630 "endonuclease/exonuclease/phosphatase family protein similar to inositol 1,4,5-trisphosphate 5-phosphatase (GI:4688596) [Arabidopsis thaliana]" 9 1 1 23 At1g05785 Got1-like family protein contains Pfam PF04178: Got1-like family profile; contains 4 transmembrane domains; 9 1 1 24 At1g05810 "Ras-related protein (ARA-1) (ARA) / small GTP-binding protein, putative nearly identical to SP:P19892 Ras-related protein ARA-1 [Arabidopsis thaliana] (Gene 76:313-319(1989))" 9 1 1 25 At1g08300 expressed protein 9 1 2 1 At1g08360 60S ribosomal protein L10A (RPL10aA) similar to 60S ribosomal protein L10A GB:AAC73045 GI:3860277 from [Arabidopsis thaliana] 9 1 2 2 At1g08530 expressed protein 9 1 2 3 At1g08590 CLAVATA1 receptor kinase (CLV1) similar to receptor-like protein kinase (Ipomoea nil) (U77888) 9 1 2 4 At1g08740 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g21020, At3g26530, At1g08760, At2g29240, At1g35650, At1g21030" 9 1 2 5 At1g08770 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 9 1 2 6 At1g08920 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 9 1 2 7 At1g08985 expressed protein 9 1 2 8 At1g11580 "pectin methylesterase, putative similar to pectin methylesterase GI:1617583 from [Lycopersicon esculentum]" 9 1 2 9 At1g11650 "RNA-binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains. ESTs gb|T44278, gb|R65195, gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1" 9 1 2 10 At1g11790 prephenate dehydratase family protein similar to gi|2392772 and is a member of the PF|00800 Prephenate dehydratase family. ESTs gb|T21562 and gb|T21062 come from this gene 9 1 2 11 At1g11850 expressed protein 9 1 2 12 At1g11950 "transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain, PF02373: jmjC domain; non-consensus TG acceptor splice site at exon boundary 79262" 9 1 2 13 At1g12010 "1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative Strong similarity to amino-cyclopropane-carboxylic acid oxidase (ACC ox2) [GI:559407] from Brassica napus. ESTs gb|Z48548 and gb|Z48549 come from this gene" 9 1 2 14 At1g12170 F-box family protein contains F-box domain Pfam:PF00646 9 1 2 15 At1g12230 "transaldolase, putative similar to Swiss-Prot:P30148 transaldolase B (EC 2.2.1.2) [Escherichia coli O157:H7]" 9 1 2 16 At1g15000 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase precursor (SP:P32826) [Arabidopsis thaliana]; similar to GB:AAD42963 from [Matricaria chamomilla] 9 1 2 17 At1g15040 glutamine amidotransferase-related 9 1 2 18 At1g15190 hypothetical protein 9 1 2 19 At1g15220 cytochrome c biogenesis protein family contains Pfam PF03918: Cytochrome C biogenesis protein; similar to Cytochrome c-type biogenesis protein cycL precursor.(SP:P45405) {Bradyrhizobium japonicum} 9 1 2 20 At1g15370 expressed protein 9 1 2 21 At1g15400 expressed protein ESTs gb|H37295 and gb|R64895 come from this gene 9 1 2 22 At1g15570 "cyclin, putative similar to cyclin A2 [Lycopersicon esculentum] GI:5420276, cyclin [Medicago sativa] GI:1050559; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 9 1 2 23 At1g15630 hypothetical protein 9 1 2 24 At1g18410 kinesin motor protein-related similar to kinesin-related protein GB:AAF24855 GI:6692749 from [Arabidopsis thaliana] 9 1 2 25 At1g18470 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 9 1 3 1 At1g18640 3-phosphoserine phosphatase (PSP) nearly identical to 3-phosphoserine phosphatase GI:3759177 from [Arabidopsis thaliana] 9 1 3 2 At1g18690 "galactosyl transferase GMA12/MNN10 family protein very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 9 1 3 3 At1g18880 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 9 1 3 4 At1g18950 "aminoacyl-tRNA synthetase family contains aminoacyl-transfer RNA synthetases class-II signature 1, PROSITE:PS00179" 9 1 3 5 At1g19080 expressed protein 9 1 3 6 At1g19140 expressed protein 9 1 3 7 At1g22030 expressed protein 9 1 3 8 At1g22090 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 9 1 3 9 At1g22250 expressed protein 9 1 3 10 At1g22280 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GI:4336436 from [Lotus japonicus]" 9 1 3 11 At1g22420 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 1 3 12 At1g22480 plastocyanin-like domain-containing protein 9 1 3 13 At1g22660 "tRNA-nucleotidyltransferase, putative / tRNA adenylyltransferase, putative similar to tRNA nucleotidyltransferase [Lupinus albus] GI:1139585; contains Pfam profile PF01743: polyA polymerase family protein" 9 1 3 14 At1g22710 sucrose transporter / sucrose-proton symporter (SUC2) nearly identical to sucrose-proton symporter SUC2 [Arabidopsis thaliana] GI:407092 9 1 3 15 At1g26240 "proline-rich extensin-like family protein similar to hydroxyproline-rich glycoprotein precursor gi|727264|gb|AAA87902; contains proline-rich extensin domains, INTERPRO:IPR002965" 9 1 3 16 At1g26290 hypothetical protein 9 1 3 17 At1g26480 14-3-3 protein GF14 iota (GRF12) identical to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis thaliana] 9 1 3 18 At1g26550 peptidyl-prolyl cis-trans isomerase PPIC-type family protein similar to SP|Q9Y237 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Rotamase Pin4) (PPIase Pin4) (Parvulin 14) {Homo sapiens}; contains Pfam profile PF00639: PPIC-type PPIASE domain 9 1 3 19 At1g26700 "seven transmembrane MLO family protein / MLO-like protein 14 (MLO14) identical to membrane protein Mlo14 [Arabidopsis thaliana] gi|14091598|gb|AAK53807; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 9 1 3 20 At1g26760 "SET domain-containing protein contains Pfam profiles PF00856: SET domain, PF00515: tetratricopeptide repeat (TPR) domain" 9 1 3 21 At1g26900 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 1 3 22 At1g26950 hypothetical protein 9 1 3 23 At1g29860 WRKY family transcription factor similar to DNA-binding protein 2 GI:4322940 from [Nicotiana tabacum] 9 1 3 24 At1g29920 "chlorophyll A-B binding protein 165/180, chloroplast / LHCII type I CAB-165/180 identical to SP|P04777 Chlorophyll A-B binding protein 165/180, chloroplast precursor (LHCII type I CAB-165/180) (LHCP) {Arabidopsis thaliana}; similar to photosystem II type I chlorophyll a /b binding protein GI:16364 from [Arabidopsis thaliana]" 9 1 3 25 At1g30070 SGS domain-containing protein similar to calcyclin binding protein [Mus musculus] GI:3142331; contains Pfam profile PF05002: SGS domain 9 1 4 1 At1g30130 expressed protein similar to hypothetical protein GI:1469227 from [Brassica oleracea] 9 1 4 2 At1g30300 expressed protein similar to putative hydrolase GI:7270684 from [Arabidopsis thaliana]; similar to PhnP protein (GI:15620485) [Rickettsia conorii] 9 1 4 3 At1g30380 "photosystem I reaction center subunit psaK, chloroplast, putative / photosystem I subunit X, putative / PSI-K, putative (PSAK) identical to SP|Q9SUI5; strong similarity to SP|P36886 Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) (Light-harvesting complex I 7 kDa protein){Hordeum vulgare}; contains Pfam profile PF01241: Photosystem I psaG / psaK" 9 1 4 4 At1g30530 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 1 4 5 At1g30590 RNA polymerase I specific transcription initiation factor RRN3 family protein weak similarity to RNA polymerase I transcription factor RRN3 [Homo sapiens] GI:7670100; contains Pfam profile PF05327: RNA polymerase I specific transcription initiation factor RRN3 9 1 4 6 At1g33540 "serine carboxypeptidase S10 family protein similar to GI:8777303 from [Arabidopsis thaliana] (DNA Res. 7 (1), 31-63 (2000))" 9 1 4 7 At1g33660 "peroxidase family protein similar to SP|Q05431 L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP) {Arabidopsis thaliana}; contains Pfam profile PF00141: Peroxidase" 9 1 4 8 At1g33850 "40S ribosomal protein S15, putative similar to SP|Q08112 40S ribosomal protein S15 {Arabidopsis thaliana}" 9 1 4 9 At1g33910 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family 9 1 4 10 At1g34065 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 9 1 4 11 At1g34130 "oligosaccharyl transferase STT3 subunit, putative similar to SP|P39007 Oligosaccharyl transferase STT3 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF02516: Oligosaccharyl transferase STT3 subunit" 9 1 4 12 At1g34320 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668) 9 1 4 13 At1g34370 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 1 4 14 At1g44350 "IAA-amino acid hydrolase 6, putative (ILL6) / IAA-Ala hydrolase, putative virtually identical to gr1-protein from [Arabidopsis thaliana] GI:3559811; similar to IAA-amino acid hydrolase GI:3421384 from [Arabidopsis thaliana]; contains TIGRfam profile TIGR01891: amidohydrolase; contains Pfam profile PF01546: Peptidase family M20/M25/M40; identical to cDNA IAA-amino acid conjugate hydrolase-like protein (ILL6), partial cds GI:17978837" 9 1 4 15 At1g44575 "photosystem II 22kDa protein, chloroplast / CP22 (PSBS) identical to photosystem II 22 kDa protein, chloroplast [precursor] SP:Q9XF91 from [Arabidopsis thaliana]; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 9 1 4 16 At1g44860 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 9 1 4 17 At1g44910 "FF domain-containing protein / WW domain-containing protein contains Pfam profiles PF01846: FF domain, PF00397: WW domain" 9 1 4 18 At1g45160 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 9 1 4 19 At1g45201 "lipase class 3 family protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 9 1 4 20 At1g46336 hypothetical protein 9 1 4 21 At1g46912 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to hypothetical protein GI:4589954 from [Arabidopsis thaliana] contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; 9 1 4 22 At1g50030 "target of rapamycin protein (TOR) identical to pTOR [Arabidopsis thaliana] GI:12002902; contains Pfam profiles PF00454 Phosphatidylinositol 3- and 4-kinase, PF02259 FAT domain, PF02260 FATC domain" 9 1 4 23 At1g50110 branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) contains Pfam profile: PF01063 aminotransferase class IV; identical to SP|Q9LPM9 Branched-chain amino acid aminotransferase 6 (EC 2.6.1.42) (Atbcat-6) {Arabidopsis thaliana} 9 1 4 24 At1g50320 thioredoxin x nearly identical to thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis thaliana] 9 1 4 25 At1g50390 fructokinase-related similar to fructokinase GI:2102691 from [Lycopersicon esculentum] 9 1 5 1 At1g50580 glycosyltransferase family protein similar to UDP rhamnose: anthocyanidin-3-glucoside rhamnosyltransferase GB:CAA81057 GI:397567 from [Petunia x hybrida]; contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 1 5 2 At1g50640 ethylene-responsive element-binding factor 3 (ERF3) identical to SP|O80339 Ethylene responsive element binding factor 3 (AtERF3) [Arabidopsis thaliana] 9 1 5 3 At1g50830 hypothetical protein 9 1 5 4 At1g50910 expressed protein 9 1 5 5 At1g53570 "mitogen-activated protein kinase kinase kinase (MAPKKK), putative (MAP3Ka) identical to MEK kinase (MAP3Ka)[Arabidopsis thaliana] gi|4204912|gb|AAD10848" 9 1 5 6 At1g53625 expressed protein 9 1 5 7 At1g53790 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 9 1 5 8 At1g53850 20S proteasome alpha subunit E1 (PAE1) identical to 20S proteasome subunit PAE1 GI:3421087 from [Arabidopsis thaliana] 9 1 5 9 At1g54020 "myrosinase-associated protein, putative strong similarity to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216389,GI:1216391 from [Brassica napus]; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 9 1 5 10 At1g54050 "17.4 kDa class III heat shock protein (HSP17.4-CIII) contains Pfam profile: PF00011 Hsp20/alpha crystallin family; identified as class CIII in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 9 1 5 11 At1g54190 zinc finger protein-related similar to zinc finger protein [Arabidopsis thaliana] GI:15811367 9 1 5 12 At1g54230 hypothetical protein 9 1 5 13 At1g57750 "cytochrome P450, putative similar to cytochrome P450 GI:4688670 from [Catharanthus roseus]" 9 1 5 14 At1g57820 "zinc finger (C3HC4-type RING finger) family protein low similarity to nuclear protein np95 [Mus musculus] GI:4220590; contains Pfam profiles PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4 type (RING finger), PF00628: PHD-finger" 9 1 5 15 At1g58120 expressed protein 9 1 5 16 At1g58200 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 9 1 5 17 At1g58320 "hypothetical protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 9 1 5 18 At1g58380 40S ribosomal protein S2 (RPS2A) similar to ribosomal protein S2 GI:939717 from (Urechis caupo) 9 1 5 19 At1g58848 "disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative similar to disease resistance protein rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631;" 9 1 5 20 At1g59453 transcription factor-related weak similarity to TFIIIC Box B-binding subunit [Homo sapiens] GI:442362 9 1 5 21 At1g62360 homeobox protein SHOOT MERISTEMLESS (STM) identical to homeobox protein SHOOT MERISTEMLESS (STM) SP:Q38874 from [Arabidopsis thaliana] 9 1 5 22 At1g62420 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 9 1 5 23 At1g62610 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 9 1 5 24 At1g62680 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR repeats Pfam Profile: PF01535 9 1 5 25 At1g62820 "calmodulin, putative similar to calmodulin SP:P04465 from [Trypanosoma brucei gambiense]; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 9 1 6 1 At1g62870 expressed protein 9 1 6 2 At1g63030 "AP2 domain-containing transcription factor, putative similar to DREB1A [Arabidopsis thaliana] GI:3738224; contains Pfam profile PF00847: AP2 domain" 9 1 6 3 At1g63090 F-box family protein / SKP1 interacting partner 3-related contains Pfam profile PF00646: F-box domain 9 1 6 4 At1g65790 "S-receptor protein kinase, putative similar to similar to PIR|T05180|T05180 S-receptor kinase ARK3 precursor - [Arabidopsis thaliana]" 9 1 6 5 At1g65850 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 1 6 6 At1g66040 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 9 1 6 7 At1g66090 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 9 1 6 8 At1g66235 expressed protein ; expression supported by MPSS 9 1 6 9 At1g66290 F-box family protein contains F-box domain Pfam:PF00646 9 1 6 10 At1g66460 protein kinase family protein contains Pfam profile: PF00069: Eukaryotic protein kinase domain 9 1 6 11 At1g66510 AAR2 protein family contains Pfam profile PF05282: AAR2 protein 9 1 6 12 At1g69220 "serine/threonine protein kinase, putative identical to serine/threonine kinase [Arabidopsis thaliana] gi|2352084|gb|AAB68776" 9 1 6 13 At1g69250 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)" 9 1 6 14 At1g69400 transducin family protein / WD-40 repeat family protein similar to mitotic checkpoint protein (GI:9294423) {Arabidopsis thaliana}; similar to mitotic checkpoint protein (BUB3) (SP:O43684) (Homo sapiens) 9 1 6 15 At1g69440 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 9 1 6 16 At1g69550 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 9 1 6 17 At1g69620 60S ribosomal protein L34 (RPL34B) similar to SP:Q42351 from [Arabidopsis thaliana] 9 1 6 18 At1g69800 "CBS domain-containing protein low similarity to SP|Q9UGI9 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Homo sapiens}; contains Pfam profile PF00571: CBS domain" 9 1 6 19 At1g69860 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 9 1 6 20 At1g72660 "developmentally regulated GTP-binding protein, putative very strong similarity to developmentally regulated GTP binding protein (DRG1) [Arabidopsis thaliana] GI:2345150" 9 1 6 21 At1g72720 expressed protein 9 1 6 22 At1g72890 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 9 1 6 23 At1g72950 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 9 1 6 24 At1g73140 hypothetical protein 9 1 6 25 At1g73180 eukaryotic translation initiation factor-related similar to eukaryotic translation initiation factor 2A (GI:21956484) [Homo sapiens]; similar to Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Swiss-Prot:P55884) [Homo sapiens] 9 1 7 1 At1g73330 "protease inhibitor, putative (DR4) identical to Dr4 GI:469114 from [Arabidopsis thaliana]; contains Pfam profile PF00197: Trypsin and protease inhibitor" 9 1 7 2 At1g73390 expressed protein 9 1 7 3 AT5G57480 PC-1 A04 9 1 7 4 3XSSC PC-1 A16 9 1 7 5 AT1G29930 PC-1 E04 9 1 7 6 3XSSC PC-1 E16 9 1 7 7 AT3G44150 PC-1 I04 9 1 7 8 3XSSC PC-1 I16 9 1 7 9 AT4G00810 PC-1 M04 9 1 7 10 3XSSC PC-1 M16 9 1 7 11 At1g76220 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 9 1 7 12 At1g76280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 1 7 13 At1g76430 "phosphate transporter family protein similar to phosphate transporters from [Catharanthus roseus] GI:2208908 and [Nicotiana tabacum] GI:12641853, transmembrane protein [Solanum tuberosum] GI:17065936; contains Pfam profile: PF00083 major facilitator superfamily protein" 9 1 7 14 At1g76470 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase GB:CAA56103 [Eucalyptus gunnii], Pinus taeda [GI:17978649]; contains non-consensus GG acceptor splice site at exon 4" 9 1 7 15 At1g76630 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile: PF00515 TPR Domain (5 copies) 9 1 7 16 At1g76700 "DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein, Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain" 9 1 7 17 At1g76850 expressed protein 9 1 7 18 At1g76900 "F-box family protein / tubby family protein similar to Tubby protein (SP:P50586) {Mus musculus}; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein (GI:6730158) [Mus musculus]; similar to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:O00294) [Homo sapiens]; similar to phosphodiesterase (GI:467578) [Mus musculus]; contains Pfam profile: PF01167: Tub family; contains Pfam PF00646: F-box domain" 9 1 7 19 At1g79520 "cation efflux family protein contains cation efflux family protein domain, Pfam:PF01545" 9 1 7 20 At1g79580 no apical meristem (NAM) family protein similar to OsNAC7 protein (GI:6730944) [Oryza sativa]; contains weak hit to Pfam PF02365 : No apical meristem (NAM) protein 9 1 7 21 At1g79710 integral membrane transporter family protein similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae]; Interpro IPR001991/ PR00173 Sodium:dicarboxylater symporter family 9 1 7 22 At1g79770 expressed protein 9 1 7 23 At1g79890 helicase-related similar to CHL1 potential helicase protein (GI:2632247) [Homo sapiens]; similar to helicase GB:AAB06962 [Homo sapiens] 9 1 7 24 At1g79930 "heat shock protein, putative contains Pfam profile: PF00012 Heat shock hsp70 proteins; similar to heat-shock proteins GB:CAA94389, GB:AAD55461 [Arabidopsis thaliana]" 9 1 7 25 At1g80070 "splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 9 1 8 1 At1g80130 expressed protein 9 1 8 2 At2g02970 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to SP|P55772 Ectonucleoside triphosphate diphosphohydrolase 1 (EC 3.6.1.5) (Ecto-apyrase) {Mus musculus}; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 9 1 8 3 At2g03020 "heat shock protein-related Prosite PS00430: TonB-dependent receptor proteins signature 1; contains some similar to Small heat shock protein, chloroplast precursor (SP:P30222) {Petunia hybrida}" 9 1 8 4 At2g03220 "galactoside 2-alpha-L-fucosyltransferase / xyloglucan alpha-(1,2)-fucosyltransferase (FUT1) (FT1) identical to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 9 1 8 5 At2g03280 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as ' axi 1 protein from Nicotiana tabacum -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 9 1 8 6 At2g03470 myb family transcription factor / ELM2 domain-containing protein contains Pfam profile: PF00249 Myb-like DNA-binding domain; contains Pfam profile: PF01448 ELM2 domain 9 1 8 7 At2g03520 expressed protein similar to SP|Q41706 A3 protein (unknown function) {Vigna unguiculata} 9 1 8 8 At2g03710 MADS-box protein (AGL3) 9 1 8 9 At2g03770 sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008; contains Pfam profile PF00685: Sulfotransferase domain 9 1 8 10 At2g07698 "ATP synthase alpha chain, mitochondrial, putative very strong similarity to SP|P23413 ATP synthase alpha chain, mitochondrial (EC 3.6.3.14) {Brassica campestris}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain" 9 1 8 11 At2g07708 expressed protein 9 1 8 12 At2g07680 ABC transporter family protein 9 1 8 13 At2g07770 "hypothetical protein low similarity to KED [Nicotiana tabacum] GI:8096269; contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 9 1 8 14 At2g10110 hypothetical protein 9 1 8 15 At2g10370 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 9 1 8 16 At2g10930 expressed protein 9 1 8 17 At2g10975 hypothetical protein 9 1 8 18 At2g16190 hypothetical protein 9 1 8 19 At2g16250 "leucine-rich repeat transmembrane protein kinase, putative " 9 1 8 20 At2g16450 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 9 1 8 21 At2g16485 expressed protein ; expression supported by MPSS 9 1 8 22 At2g16690 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 9 1 8 23 At2g16750 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 9 1 8 24 At2g16920 "ubiquitin-conjugating enzyme family protein low similarity to ubiquitin-conjugating BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating enzyme [Mus musculus] GI:3319990; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 9 1 8 25 At2g16960 importin beta-2 subunit family protein contains weak hit to Pfam PF02985: HEAT repeat (4 copies); contains weak hit to Pfam PF03130: PBS lyase HEAT-like repeat (2 copies); supported by tandem duplication of importin beta family protein (TIGR_Ath1:At2g16950) [Arabidopsis thaliana]; similar to Importin beta-2 subunit (Karyopherin beta-2 subunit) (Transportin) (M9 region interaction protein) (MIP) (Swiss-Prot:Q92973) [Homo sapiens] 9 1 9 1 At2g19760 profilin 1 (PRO1) (PFN1) (PRF1) / allergen Ara t 8 identical to profilin 1 (Allergen Ara t 8) SP:Q42449 GI:1353770 from [Arabidopsis thaliana] 9 1 9 2 At2g19820 LOB domain family protein / lateral organ boundaries domain family protein (LBD9) identical to SP|O82198 Putative LOB domain protein 9 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 9 1 9 3 At2g19990 pathogenesis-related protein 1 (PR-1) identical to pathogenesis-related protein 1 {Arabidopsis thaliana} GI:166805; contains an extracellular proteins SCP/Tpx-1/Ag5/PR-1/Sc7 signature (PDOC00772) 9 1 9 4 At2g20050 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain;" 9 1 9 5 At2g20210 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 9 1 9 6 At2g20280 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 9 1 9 7 At2g20465 expressed protein 9 1 9 8 At2g20510 "mitochondrial import inner membrane translocase subunit TIM44, putative contains similarity to Swiss-Prot:O35857 import inner membrane translocase subunit TIM44, mitochondrial precursor [Mus musculus]; contains Pfam domian PF04280: Mitochondrial import inner membrane, translocase subunit TIM44" 9 1 9 9 At2g23130 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 9 1 9 10 At2g23180 "cytochrome P450, putative " 9 1 9 11 At2g23350 "polyadenylate-binding protein, putative / PABP, putative " 9 1 9 12 At2g23410 dehydrodolichyl diphosphate synthase / DEDOL-PP synthase (DPS) identical to dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] GI:7960765 9 1 9 13 At2g23580 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 9 1 9 14 At2g23640 reticulon family protein (RTNLB13) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon 9 1 9 15 At2g23820 metal-dependent phosphohydrolase HD domain-containing protein contains Pfam profile PF01966: HD domain 9 1 9 16 At2g23910 "cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Saccharum officinarum [GI:3341511]" 9 1 9 17 At2g26750 "epoxide hydrolase, putative strong similarity to ATsEH [Arabidopsis thaliana] GI:1109600" 9 1 9 18 At2g26800 "hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative similar to SP|P35915 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA lyase) {Gallus gallus}; contains Pfam profile PF00682: HMGL-like" 9 1 9 19 At2g26950 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 1 9 20 At2g26990 "COP9 signalosome complex subunit 2 / CSN complex subunit 2 (CSN2) proteasome, COP9-complex and eIF3-domain protein; identical to CSN complex subunit 2 [Arabidopsis thaliana] GI:18056655; identical to cDNA CSN complex subunit 2 (CSN2) GI:18056654" 9 1 9 21 At2g27120 "DNA-directed DNA polymerase epsilon catalytic subunit, putative similar to SP|Q07864 DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A) {Homo sapiens}; contains Pfam profiles: PF03175 DNA polymerase type B, organellar and viral, PF00136 DNA polymerase family B, PF03104 DNA polymerase family B, exonuclease domain" 9 1 9 22 At2g27180 expressed protein 9 1 9 23 At2g27320 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 9 1 9 24 At2g27375 hypothetical protein 9 1 9 25 At2g30100 "ubiquitin family protein low similarity to SP|Q9UQ13 Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) {Homo sapiens}; contains Pfam profiles PF00240: Ubiquitin family, PF01535: PPR repeat, PF00560: Leucine Rich Repeat" 9 1 10 1 At2g30150 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 1 10 2 At2g30330 GCN5L1 family protein similar to GCN5-like protein 1 (RT14 protein) (Swiss-Prot:P78537) [Homo sapiens] 9 1 10 3 At2g30370 allergen-related weak similarity to pollen major allergen 2 protein [Juniperus ashei] gi|9955725|emb|CAC05582 9 1 10 4 At2g30530 expressed protein 9 1 10 5 At2g30575 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 9 1 10 6 At2g30700 expressed protein 9 1 10 7 At2g30760 hypothetical protein 9 1 10 8 At2g33380 calcium-binding RD20 protein (RD20) induced by abscisic acid during dehydration PMID:10965948; putative transmembrane channel protein PMID:10965948; identical to GI:10862968 [Arabidopsis thaliana]; contains EF-hand domain 9 1 10 9 At2g33430 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor [Garden snapdragon] SWISS-PROT:Q38732" 9 1 10 10 At2g33570 expressed protein 9 1 10 11 At2g33620 DNA-binding family protein / AT-hook protein 1 (AHP1) identical to AT-hook protein 1 [Arabidopsis thaliana] gi|2598227|emb|CAA10857 9 1 10 12 At2g33750 "purine permease, putative (PUP2) similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profiles PF03151: Domain of unknown function, DUF250, PF00892: Integral membrane protein; identical to cDNA putative purine permease (PUP2) mRNA, partial cds GI:14388590" 9 1 10 13 At2g33793 expressed protein 9 1 10 14 At2g34000 "zinc finger protein-related contains weak hit to Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 1 10 15 At2g34040 apoptosis inhibitory 5 (API5) family protein contains Pfam domain PF05918 Apoptosis inhibitory protein 5 (API5) 9 1 10 16 At2g36670 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 9 1 10 17 At2g36690 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to IDS3 [Hordeum vulgare][GI:4514655], leucoanthocyanidin dioxygenase [SP|P51091][Malus domestica]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 9 1 10 18 At2g36850 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 9 1 10 19 At2g36890 myb family transcription factor (MYB38) contains Pfam profile: PF00249 myb-like DNA-binding domain 9 1 10 20 At2g37035 expressed protein 9 1 10 21 At2g37070 expressed protein 9 1 10 22 At2g37220 "29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative similar to SP|Q43349 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29) {Arabidopsis thaliana}" 9 1 10 23 At2g37280 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza] 9 1 10 24 At2g39880 myb family transcription factor (MYB25) contains Pfam profile: PF00249 myb-like DNA-binding domain 9 1 10 25 At2g39940 coronatine-insensitive 1 / COI1 (FBL2) E3 ubiquitin ligase SCF complex F-box subunit; identical to LRR-containing F-box protein GI:3158394 from [Arabidopsis thaliana] 9 1 11 1 At2g40085 expressed protein 9 1 11 2 At2g40110 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 9 1 11 3 At2g40240 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 1 11 4 At2g40300 "ferritin, putative similar to ferritin subunit cowpea2 precursor [Vigna unguiculata] GI:2970654; contains Pfam profile PF00210: Ferritin-like domain" 9 1 11 5 At2g40435 expressed protein 9 1 11 6 At2g40480 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS 9 1 11 7 At2g43040 calmodulin-binding protein similar to pollen-specific calmodulin-binding protein MPCBP GI:10086260 from [Zea mays]; contains Pfam profile PF00515: TPR Domain 9 1 11 8 At2g43100 aconitase C-terminal domain-containing protein contains Pfam profile PF00694: Aconitase C-terminal domain 9 1 11 9 At2g43240 nucleotide-sugar transporter family protein weak similarity to SP|P78382 CMP-sialic acid transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 9 1 11 10 At2g43290 calmodulin-like protein (MSS3) identical to calmodulin-like MSS3 from GI:9965747 [Arabidopsis thaliana] 9 1 11 11 At2g43480 "peroxidase, putative similar to peroxidase; peroxidase ATP14a [Arabidopsis thaliana] gi|1546690|emb|CAA67335" 9 1 11 12 At2g43535 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 9 1 11 13 At2g43690 "lectin protein kinase, putative similar to receptor-like kinase LECRK1 [Arabidopsis thaliana] gi|2150023|gb|AAB58725" 9 1 11 14 At2g43745 expressed protein weak similarity to RTM1 (GI:6503088) [Arabidopsis thaliana] 9 1 11 15 At2g46380 hypothetical protein weak similarity to extra-large G-protein [Arabidopsis thaliana] GI:3201682 9 1 11 16 At2g46440 "cyclic nucleotide-regulated ion channel, putative (CNGC11) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc3) GI:4581201 from [Arabidopsis thaliana]" 9 1 11 17 At2g46580 pyridoxine 5'-phosphate oxidase-related similar to pyridoxine 5'-phosphate oxidase (GI:3237304) [Rattus norvegicus]; similar to pyridoxamine 5'-phosphate oxidase (GI:22294052) [Thermosynechococcus elongatus BP-1] 9 1 11 18 At2g46620 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 9 1 11 19 At2g46790 "pseudo-response regulator 9 (APRR9) / timing of CAB expression 1-like protein (TL1) identical to pseudo-response regulator 9 GI:10281000 from [Arabidopsis thaliana], timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA timing of CAB expression 1-like protein GI:9247021" 9 1 11 20 At2g46840 expressed protein ; expression supported by MPSS 9 1 11 21 At2g46980 expressed protein 9 1 11 22 At2g47040 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 9 1 11 23 At3g02350 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 9 1 11 24 At3g02410 hypothetical protein weak similarity to kynurenine formamidase [Mus musculus] GI:21552719 9 1 11 25 At3g02555 expressed protein 9 1 12 1 At3g02590 "delta 7-sterol-C5-desaturase, putative similar to delta7 sterol C-5 desaturase GI:5031219 from [Arabidopsis thaliana]" 9 1 12 2 At3g02770 dimethylmenaquinone methyltransferase family protein similar to bacterial S-adenosylmethionine:2-demethylmenaquinone methyltransferases; contains Pfam profile PF03737: Dimethylmenaquinone methyltransferase 9 1 12 3 At3g02830 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 9 1 12 4 At3g02980 GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile: PF00583 acetyltransferase (GNAT) family 9 1 12 5 At3g03040 F-box family protein contains F-box domain Pfam:PF00646 9 1 12 6 At3g05660 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 9 1 12 7 At3g05685 expressed protein 9 1 12 8 At3g05830 expressed protein 9 1 12 9 At3g05890 hydrophobic protein (RCI2B) / low temperature and salt responsive protein (LTI6B) identical to SP|Q9ZNS6 Hydrophobic protein RCI2B (Low temperature and salt responsive protein LTI6B) {Arabidopsis thaliana} 9 1 12 10 At3g06035 expressed protein 9 1 12 11 At3g06070 expressed protein 9 1 12 12 At3g06200 "guanylate kinase, putative similar to guanylate kinase (GMP kinase) [Bacillus halodurans] Swiss-Prot:Q9K9Y2; contains Pfam profile: PF00625 guanylate kinase" 9 1 12 13 At3g06260 "galactinol synthase, putative contains Pfam profile: PF01501 glycosyl transferase family 8" 9 1 12 14 At3g09180 expressed protein 9 1 12 15 At3g09250 expressed protein 9 1 12 16 At3g09410 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase 9 1 12 17 At3g09480 "histone H2B, putative similar to histone from Arabidopsis thaliana GI:2407802, Gossypium hirsutum SP|O22582, H2B-3 GB:CAA12231 from [Lycopersicon esculentum]; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 9 1 12 18 At3g09670 PWWP domain-containing protein 9 1 12 19 At3g09730 expressed protein 9 1 12 20 At3g09860 expressed protein 9 1 12 21 At3g09920 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 9 1 12 22 At3g12280 "retinoblastoma-related protein (RBR1) nearly identical to retinoblastoma-related protein [Arabidopsis thaliana] GI:8777927; contains Pfam profiles: PF01858 retinoblastoma-associated protein A domain, PF01857 retinoblastoma-associated protein B domain" 9 1 12 23 At3g12340 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative contains Pfam profile: PF00254, FKBP-type peptidyl-prolyl cis-trans isomerases" 9 1 12 24 At3g12520 "sulfate transporter family protein similar to sulfate transporter [Arabidopsis thaliana] GI:3777483; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain" 9 1 12 25 At3g12570 expressed protein 9 1 13 1 At3g12730 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 1 13 2 At3g12780 "phosphoglycerate kinase, putative similar to SP|P41758 Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) {Chlamydomonas reinhardtii}; contains Pfam profile PF00162: phosphoglycerate kinase" 9 1 13 3 At3g12960 expressed protein similar to seed maturation protein PM28 GB:AAD30427 from [Glycine max] 9 1 13 4 At3g13020 "hAT dimerisation domain-containing protein contains Pfam profile: PF04937 domain of unknown function (DUF659), weak hit to PF05699: hAT family dimerisation domain" 9 1 13 5 At3g15351 expressed protein 9 1 13 6 At3g15360 "thioredoxin M-type 4, chloroplast (TRX-M4) nearly identical to SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor (TRX-M4) {Arabidopsis thaliana}" 9 1 13 7 At3g15520 "peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase cyclophylin-type; identical to SP|P82869 Thylakoid lumenal 38 kDa protein, chloroplast precursor (P38) {Arabidopsis thaliana}" 9 1 13 8 At3g15570 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 9 1 13 9 At3g15720 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Cucumis sativus] GI:6624205; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 9 1 13 10 At3g15780 expressed protein 9 1 13 11 At3g15940 glycosyl transferase family 1 protein contains Pfam profile:PF00534 Glycosyl transferases group 1 9 1 13 12 At3g15980 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]" 9 1 13 13 At3g18660 "glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-1 from Homo sapiens [SP|P46976], Oryctolagus cuniculus [SP|P13280]" 9 1 13 14 At3g18700 hypothetical protein 9 1 13 15 At3g18850 phospholipid/glycerol acyltransferase family protein contains Pfam profile: PF01553 Acyltransferase 9 1 13 16 At3g18890 expressed protein similar to UV-B and ozone similarly regulated protein 1 UOS1 [Pisum sativum] GI:20339364 9 1 13 17 At3g19050 kinesin motor protein-related contains Pfam profile: PF00225 Kinesin motor domain; contains non-consensus splice site (GC) at intron 12 9 1 13 18 At3g19100 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 9 1 13 19 At3g19270 cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; 9 1 13 20 At3g19330 polyadenylate-binding protein-related / PABP-related similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana]; similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) (Swiss-Prot:P42731) [Arabidopsis thaliana] 9 1 13 21 At3g22020 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function; weak similarity to receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana]; weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris] 9 1 13 22 At3g22080 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 1 13 23 At3g22250 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 1 13 24 At3g22300 "40S ribosomal protein S10, mitochondrial (RPS10) identical to SP|P42797 40S ribosomal protein S10, mitochondrial precursor {Arabidopsis thaliana}" 9 1 13 25 At3g22430 expressed protein 9 1 14 1 At3g22480 "prefoldin-related KE2 family protein similar to Swiss-Prot:Q9UHV9 prefoldin subunit 2 (Protein HSPC231) [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 9 1 14 2 At3g22650 F-box family protein contains F-box domain Pfam:PF00646 9 1 14 3 At3g22710 F-box family protein contains F-box domain Pfam:PF00646 9 1 14 4 At3g25620 "ABC transporter family protein similar to GB:AAC61893 from [Bactrocera tryoni] (Insect Mol. Biol. 6 (4), 343-356 (1997))" 9 1 14 5 At3g25680 expressed protein 9 1 14 6 At3g25830 "myrcene/ocimene synthase, putative similar to myrcene/ocimene synthase [Arabidopsis thaliana] GI:9957293; contains Pfam profiles PF03936: Terpene synthase family, metal binding domain, PF01397: Terpene synthase, N-terminal domain" 9 1 14 7 At3g25880 "auxin-resistance protein, putative similar to Swiss-Prot:P42744 auxin-resistance protein AXR1 [Arabidopsis thaliana]" 9 1 14 8 At3g26020 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 9 1 14 9 At3g26080 plastid-lipid associated protein PAP / fibrillin family protein low similarity to Plastid-lipid-Associated Protein [Nicotiana tabacum] GI:2632088; contains Pfam profile PF04755: PAP_fibrillin 9 1 14 10 At3g26200 "cytochrome P450 71B22, putative (CYP71B22) Identical to cytochrome P450 71B22 (SP:Q9LTM1)[Arabidopsis thaliana];contains Pfam profile: PF00067 cytochrome P450" 9 1 14 11 At3g26250 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 1 14 12 At3g28980 expressed protein 9 1 14 13 At3g29033 glycine-rich protein 9 1 14 14 At3g29170 expressed protein contains Pfam PF05915: Eukaryotic protein of unknown function (DUF872) 9 1 14 15 At3g29200 "chorismate mutase, chloroplast (CM1) identical to chorismate mutase GB:Z26519 [SP|P42738] [Arabidopsis thaliana]" 9 1 14 16 At3g29340 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 1 14 17 At3g29375 XH domain-containing protein contains Pfam profile: PF03469: XH domain 9 1 14 18 At3g29635 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 9 1 14 19 At3g29680 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 9 1 14 20 At3g43740 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana] gi|14573457|gb|AAK68073" 9 1 14 21 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 9 1 14 22 At3g43980 "40S ribosomal protein S29 (RPS29A) ribosomal protein S29, rat, PIR:S30298" 9 1 14 23 At3g44060 F-box family protein contains F-box domain Pfam:PF00646 9 1 14 24 At3g44210 hypothetical protein 9 1 14 25 At3g44260 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Homo sapiens]" 9 1 15 1 At3g44480 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 1 15 2 At3g44540 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 9 1 15 3 At3g47410 hypothetical protein 9 1 15 4 At3g47450 expressed protein 9 1 15 5 At3g47590 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 9 1 15 6 At3g47650 bundle-sheath defective protein 2 family / bsd2 family similar to bundle sheath defective protein 2 [Zea mays] GI:4732091 9 1 15 7 At3g47810 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 9 1 15 8 At3g47850 expressed protein 9 1 15 9 At3g48040 Rac-like GTP-binding protein (ARAC8) identical to rac GTP binding protein Arac8 GI:3702966 from [Arabidopsis thaliana] 9 1 15 10 At3g48080 lipase class 3 family protein / disease resistance protein-related similar to disease resistance protein/lipase homolog EDS1 GI:4454567; contains Pfam profile PF01764: Lipase 9 1 15 11 At3g50970 dehydrin xero2 (XERO2) / low-temperature-induced protein LTI30 (LTI30) identical to dehydrin Xero 2 (Low-temperature-induced protein LTI30) [Arabidopsis thaliana] SWISS-PROT:P42758 9 1 15 12 At3g51030 thioredoxin H-type 1 (TRX-H-1) identical to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis thaliana} 9 1 15 13 At3g51190 "60S ribosomal protein L8 (RPL8B) ribosomal protein L8, cytosolic - Arabidopsis thaliana, PIR:T04582" 9 1 15 14 At3g51250 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 9 1 15 15 At3g51410 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 9 1 15 16 At3g51470 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase-2C, Mesembryanthemum crystallinum, EMBL:AF075580" 9 1 15 17 At3g51630 protein kinase family protein contains Pfam profile: PF00069 protein kinase domain 9 1 15 18 At3g51690 "hypothetical protein low similarity to SP|P07271 DNA repair and recombination protein PIF1, mitochondrial precursor {Saccharomyces cerevisiae}" 9 1 15 19 At3g54160 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to At1g48390, At1g47920 (syntaxin SYP81), At5g41830, At3g44180,At1g56610, At3g58890, At1g48390, At3g59270 [Arabidopsis thaliana]" 9 1 15 20 At3g54220 "scarecrow transcription factor, putative nearly identical to SCARECROW [Arabidopsis thaliana] GI:1497987" 9 1 15 21 At3g54390 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 9 1 15 22 At3g54450 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 9 1 15 23 At3g54600 DJ-1 family protein low similarity to SP|Q51732 protease I from Pyrococcus furiosus; contains Pfam profile: PF01965 DJ-1/PfpI family 9 1 15 24 At3g54660 "gluthatione reductase, chloroplast nearly identical to SP|P42770 Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRASE) {Arabidopsis thaliana}; identical to cDNA glutathione reductase GI:451197" 9 1 15 25 At3g54830 "amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 9 1 16 1 At3g54890 chlorophyll A-B binding protein / LHCI type I (CAB) identical to chlorophyll A/B-binding protein [Arabidopsis thaliana] GI:16207; contains Pfam profile: PF00504 chlorophyll A-B binding protein 9 1 16 2 At3g57660 "DNA-directed RNA polymerase family protein similar to SP|O35134 DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa subunit) (RPA194) {Mus musculus}; contains InterPro accession IPR000722: RNA polymerase, alpha subunit" 9 1 16 3 At3g57720 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 9 1 16 4 At3g57870 "ubiquitin-conjugating enzyme, putative strong similarity to SP|P50550 Ubiquitin-like protein SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein ligase) (Ubiquitin carrier protein) (Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 9 1 16 5 At3g57930 expressed protein 9 1 16 6 At3g58120 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor ;supported by cDNA gi|15100054|gb|AF401300.1|AF401300 9 1 16 7 At3g58180 "PBS lyase HEAT-like repeat-containing protein contains Pfam profile: PF03130: PBS lyase HEAT-like repeat; contains alternative donor splice site TT at exon 2,hypothetical protein C14A4.1 - Caenorhabditis elegans, PIR:T19243" 9 1 16 8 At3g58360 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 1 16 9 At3g58420 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 9 1 16 10 At3g61150 "homeobox-leucine zipper family protein / homeodomain GLABRA2 like protein 1 (HD-GL2-1) similar to Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis thaliana, EMBL:AF077335" 9 1 16 11 At3g61200 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 9 1 16 12 At3g61370 "expressed protein hypothetical protein AT4g07940 - Arabidopsis thaliana, EMBL:AC006266" 9 1 16 13 At3g61410 hypothetical protein 9 1 16 14 At3g61570 intracellular protein transport protein USO1-related contains weak similarity to intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] 9 1 16 15 At3g61620 exonuclease RRP41 (RRP41) identical to exonuclease RRP41 [Arabidopsis thaliana] GI:6164938 9 1 16 16 At3g61780 expressed protein ; expression supported by MPSS 9 1 16 17 At3g61840 expressed protein 9 1 16 18 At4g00780 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 9 1 16 19 At4g00820 calmodulin-binding protein-related contains Pfam profile PF00612: IQ calmodulin-binding motif 9 1 16 20 At4g00970 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 9 1 16 21 At4g01023 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 1 16 22 At4g01180 XH/XS domain-containing protein contains Pfam domain PF03469: XH domain and PF03468: XS domain 9 1 16 23 At4g01220 expressed protein 9 1 16 24 At4g01390 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 1 16 25 At4g01430 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 9 1 17 1 At4g04190 expressed protein 9 1 17 2 At4g04320 "malonyl-CoA decarboxylase family protein contains weak similarity to Malonyl-CoA decarboxylase, mitochondrial precursor (EC 4.1.1.9) (MCD) (Swiss-Prot:O95822) [Homo sapiens]; contains Pfam profile PF05292: Malonyl-CoA decarboxylase (MCD)" 9 1 17 3 At4g04490 protein kinase family protein contains Pfam PF00069: Protein kinase domain 9 1 17 4 At4g04545 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 9 1 17 5 At4g04740 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Lycopersicon esculentum] gi|19171502|emb|CAC87494" 9 1 17 6 At4g04790 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 1 17 7 At4g04950 "thioredoxin family protein similar to PKCq-interacting protein PICOT from [Mus musculus] GI:6840949, [Rattus norvegicus] GI:6840951; contains Pfam profile PF00085: Thioredoxin" 9 1 17 8 At4g04990 expressed protein contains Pfam domain PF05553: Cotton fiber expressed protein 9 1 17 9 At4g09700 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 9 1 17 10 At4g09760 "choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375" 9 1 17 11 At4g09930 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains Pfam PF04548: AIG1 family; 9 1 17 12 At4g09965 expressed protein ; expression supported by MPSS 9 1 17 13 At4g10100 "molybdenum cofactor synthesis family protein similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) [Homo sapiens]; contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; contains Pfam PF02597: ThiS family" 9 1 17 14 At4g10160 "zinc finger (C3HC4-type RING finger) family protein zinc finger protein, Arabidopsis thaliana, gb:L76926" 9 1 17 15 At4g10310 sodium transporter (HKT1) identical to sodium transporter AtHKT1 [Arabidopsis thaliana] gi|7716474|gb|AAF68393 9 1 17 16 At4g10370 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 1 17 17 At4g13190 "protein kinase family protein similar to serine/threonine kinase BNK1 [Brassica napus] gi|10445209|gb|AAG16628; contains protein kinase domain, Pfam:PF00069" 9 1 17 18 At4g13235 "hypothetical protein late embryogenesis abundant protein -Picea glauca,PID:g1161171" 9 1 17 19 At4g13345 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 9 1 17 20 At4g13400 expressed protein 9 1 17 21 At4g13560 late embryogenesis abundant domain-containing protein / LEA domain-containing protein similar to LEA protein [Cicer arietinum] GI:2909420; contains Pfam profile PF02987: Late embryogenesis abundant protein 9 1 17 22 At4g13615 four F5 protein-related / 4F5 protein-related contains weak hit to Pfam profile PF04419: 4F5 protein family; contains non-consensus AT-AC splice sites at intron 1 9 1 17 23 At4g13770 cytochrome P450 family protein 9 1 17 24 At4g13830 "DNAJ heat shock N-terminal domain-containing protein (J20) identical to DnaJ-like protein [Arabidopsis thaliana] GI:6691127; similar to SP|Q05646 Chaperone protein dnaJ Erysipelothrix rhusiopathiae, J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain" 9 1 17 25 At4g16165 Expressed protein 9 1 18 1 At4g16210 "enoyl-CoA hydratase/isomerase family protein similar to 3-hydroxybutyryl-CoA dehydratase (Crotonase) from Clostridium acetobutylicum [SP|P52046], FadB1x (enoyl-CoA hydratase) from Pseudomonas putida [GI:13310130]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 9 1 18 2 At4g16370 oligopeptide transporter OPT family protein similar to oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein 9 1 18 3 At4g16430 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 1 18 4 At4g16550 "heat shock protein-related contains similarity to Swiss-Prot:P31170 small heat shock protein, chloroplast precursor [Arabidopsis thaliana]" 9 1 18 5 At4g16590 glucosyltransferase-related low similarity to beta-(1-3)-glucosyl transferase [Bradyrhizobium japonicum] GI:3687658 9 1 18 6 At4g16720 60S ribosomal protein L15 (RPL15A) 9 1 18 7 At4g16765 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|P40902 isp7 from Schizosaccharomyces pombe, GI:475959 flavanone-3-hydroxylase (naringenin 3-dioxygenase) from Medicago sativa, GI:1944197 flavanone 3-hydroxylase from Perilla frutescens; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 9 1 18 8 At4g19300 "hypothetical protein includes At2g10370, At5g36050, At1g35090, At1g44860, At4g19300, At1g42400, At3g43040, At3g42500" 9 1 18 9 At4g19350 expressed protein 9 1 18 10 At4g19515 disease resistance family protein similar to downy mildew resistance protein RPP5 [Arabidopsis thaliana] GI:6449046; contains Pfam profile PF01582: TIR domain 9 1 18 11 At4g19570 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 9 1 18 12 At4g19710 "bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative similar to gb|X71364 [PIR|S46497] aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana" 9 1 18 13 At4g19770 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 9 1 18 14 At4g19950 expressed protein 9 1 18 15 At4g20000 VQ motif-containing protein contains PF05678: VQ motif 9 1 18 16 At4g22800 hypothetical protein 9 1 18 17 At4g22850 expressed protein 9 1 18 18 At4g23000 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 9 1 18 19 At4g23060 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 9 1 18 20 At4g23210 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 9 1 18 21 At4g23270 protein kinase family protein contains Pfam PF00069: Protein kinase domain 9 1 18 22 At4g23430 "short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily; contains Pfam PF00106: oxidoreductase, short chain dehydrogenase/reductase family" 9 1 18 23 At4g23470 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 1 18 24 At4g26060 expressed protein 9 1 18 25 At4g26100 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 9 1 19 1 At4g26230 "60S ribosomal protein L31 (RPL31B) ribosomal protein L31, Nicotiana glutinosa, U23784" 9 1 19 2 At4g26290 expressed protein 9 1 19 3 At4g26440 WRKY family transcription factor identical to WRKY transcription factor 34 (WRKY34) GI:15990591 from [Arabidopsis thaliana] 9 1 19 4 At4g26500 "BolA-like family protein / Fe-S metabolism associated domain-containing protein similar to SufE protein [Erwinia chrysanthemi] GI:11342550; contains Pfam profiles PF02657: Fe-S metabolism associated domain, PF01722: BolA-like protein" 9 1 19 5 At4g26630 expressed protein 9 1 19 6 At4g26680 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 1 19 7 At4g29260 acid phosphatase class B family protein similar to acid phosphatase [Glycine max] GI:3341443; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 9 1 19 8 At4g29310 expressed protein 9 1 19 9 At4g29480 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 9 1 19 10 At4g29540 bacterial transferase hexapeptide repeat-containing protein similar to UDP-acetylglucosamine acyltransferase [Acinetobacter sp. M-1] GI:13358850; contains Pfam profile PF00132: Bacterial transferase hexapeptide (three repeats) 9 1 19 11 At4g29700 type I phosphodiesterase/nucleotide pyrophosphatase family protein similar to SP|P22413 Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains Pfam profile PF01663: Type I phosphodiesterase / nucleotide pyrophosphatase 9 1 19 12 At4g29740 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase, Zea mays [gi:3882018] [gi:3441978]" 9 1 19 13 At4g29900 "calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA10) identical to SP|Q9SZR1 Potential calcium-transporting ATPase 10, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana}; similar to SP|Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) {Arabidopsis thaliana}" 9 1 19 14 At4g29950 microtubule-associated protein identical to microtubule-associated protein GI:5032258 from [Arabidopsis thaliana]; similar to TBC1 domain family member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains Pfam profile PF00566: TBC domain 9 1 19 15 At4g32470 "ubiquinol-cytochrome C reductase complex 14 kDa protein, putative similar to SP|P48502 Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam profile PF02271: Ubiquinol-cytochrome C reductase complex 14kD subunit" 9 1 19 16 At4g32510 "anion exchange family protein anion exchange protein 2, Homo sapiens, PIR2:S21086" 9 1 19 17 At4g32650 "inward rectifying potassium channel, putative (KAT3) (AKT4) (KC1) identical to K+ inward rectifying channel protein KC1 [Arabidopsis thaliana] gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel [Arabidopsis thaliana] gi|1165000|emb|CAA63601; Shaker-type channel (1P/6TM), PMID:11500563" 9 1 19 18 At4g32695 "hypothetical protein hypothetical protein yjbI, Bacillus subtilis, PIR2:A69844" 9 1 19 19 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 9 1 19 20 At4g32900 expressed protein 9 1 19 21 At4g33050 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 9 1 19 22 At4g33100 expressed protein contains Pfam PF05254: Uncharacterised protein family (UPF0203) 9 1 19 23 AT5G57480 PC-1 A04 9 1 19 24 3XSSC PC-1 A16 9 1 19 25 AT1G29930 PC-1 E04 9 1 20 1 3XSSC PC-1 E16 9 1 20 2 AT3G44150 PC-1 I04 9 1 20 3 3XSSC PC-1 I16 9 1 20 4 AT4G00810 PC-1 M04 9 1 20 5 3XSSC PC-1 M16 9 1 20 6 At4g35710 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 9 1 20 7 At4g35760 expressed protein 9 1 20 8 At4g35900 DNA-binding protein-related weak similarity to DNA-binding factor gmlip15 [Zea mays] GI:14289167 9 1 20 9 At4g35940 expressed protein 9 1 20 10 At4g36070 "calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand" 9 1 20 11 At4g36120 expressed protein 9 1 20 12 At4g36290 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Mus musculus] GI:5410255; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 9 1 20 13 At4g36380 cytochrome P450 90C1 (CYP90C1) / rotundifolia3 (ROT3) identical to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; 9 1 20 14 At4g39030 enhanced disease susceptibility 5 (EDS5) / salicylic acid induction deficient 1 (SID1) identical to SP|Q945F0; contains Pfam profile PF01554: Uncharacterized membrane protein family 9 1 20 15 At4g39070 "zinc finger (B-box type) family protein salt-tolerance protein - Arabidopsis thaliana, PID:e224078" 9 1 20 16 At4g39240 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 9 1 20 17 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 9 1 20 18 At4g39390 transporter-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593 9 1 20 19 At4g39430 expressed protein ; expression supported by MPSS 9 1 20 20 At4g39590 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 9 1 20 21 At4g39650 gamma-glutamyltranspeptidase family protein SP|P07314 Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 9 1 20 22 At5g03150 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 1 20 23 At5g03210 expressed protein 9 1 20 24 At5g03380 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP2 [GI:4097545]; contains Pfam profile PF00403: Heavy-metal-associated domain 9 1 20 25 At5g03435 C2 domain-containing protein contains Pfam profile PF00168: C2 domain 9 1 21 1 At5g03560 expressed protein 9 1 21 2 At5g03620 subtilase family protein contains similarity to subtilisin-type serine endopeptidase XSP1 GI:6708179 from [Arabidopsis thaliana] 9 1 21 3 At5g03800 "exostosin family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles: PF03016 exostosin family, PF01535 PPR repeat" 9 1 21 4 At5g03860 "malate synthase, putative strong similarity to glyoxysomal malate synthase from Brassica napus [SP|P13244]" 9 1 21 5 At5g06450 expressed protein 9 1 21 6 At5g06510 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 9 1 21 7 At5g06670 kinesin motor protein-related 9 1 21 8 At5g06720 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|1491617|emb|CAA68212" 9 1 21 9 At5g06900 cytochrome P450 family protein 9 1 21 10 At5g06950 bZIP transcription factor HBP-1b homolog identical to transcription factor HBP-1b homolog SP:P43273 from [Arabidopsis thaliana] 9 1 21 11 At5g07100 "WRKY family transcription factor SPF1 protein - Ipomoea batatas (sweet potato), PIR:S51529" 9 1 21 12 At5g07150 leucine-rich repeat family protein contains weak similarity to LRR receptor-like protein kinase [Nicotiana tabacum] gi|7672732|gb|AAF66615; contains Pfam PF00560 domain Leucine Rich Repeat 9 1 21 13 At5g10250 "phototropic-responsive protein, putative similar to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 9 1 21 14 At5g10310 expressed protein 9 1 21 15 At5g10470 "kinesin motor protein-related TH65 protein, Arabidopsis thaliana, EMBL:AJ001729; contains Pfam profile PF00225: Kinesin motor domain" 9 1 21 16 At5g10530 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 9 1 21 17 At5g10690 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein contains CBS and PPR domain repeats 9 1 21 18 At5g10720 "sensory transduction histidine kinase-related similar to Sensor protein rcsC (Capsular synthesis regulator component C) (SP:Q56128) {Salmonella typhi}; sensory transduction histidine kinase slr1759, Synechocystis sp., PIR:S75142" 9 1 21 19 At5g10890 myosin heavy chain-related contains weak similarity to myosin heavy chain [Rana catesbeiana] gi|4249703|gb|AAD13773 9 1 21 20 At5g10950 cylicin-related low similarity to SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos taurus} 9 1 21 21 At5g14070 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 9 1 21 22 At5g14120 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 9 1 21 23 At5g14300 "prohibitin, putative similar to prohibitin [Arabidopsis thaliana] GI:1946331; contains Pfam profile PF01145: SPFH domain / Band 7 family" 9 1 21 24 At5g14360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 9 1 21 25 At5g14540 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 9 1 22 1 At5g14570 "transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362; contains Pfam profile PF00083: Sugar (and other) transporter" 9 1 22 2 At5g14740 carbonic anhydrase 2 / carbonate dehydratase 2 (CA2) (CA18) nearly identical to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana} 9 1 22 3 At5g14800 pyrroline-5-carboxylate reductase identical to pyrroline-5-carboxylate reductase SP:P54904 from [Arabidopsis thaliana] 9 1 22 4 At5g17500 "glycosyl hydrolase family 5 protein / cellulase family protein predicted protein F3F19.15 - Arabidopsis thaliana, EMBL:AC007357" 9 1 22 5 At5g17540 "transferase family protein similar to hypersensitivity-related gene product HSR201 - Nicotiana tabacum, EMBL:X95343; contains Pfam transferase family domain PF00248" 9 1 22 6 At5g17710 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform a [Chlamydomonas reinhardtii] GI:15384277; contains Pfam profile PF01025: co-chaperone GrpE 9 1 22 7 At5g17760 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 9 1 22 8 At5g17920 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase / vitamin-B12-independent methionine synthase / cobalamin-independent methionine synthase (CIMS) identical to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana} 9 1 22 9 At5g17990 "anthranilate phosphoribosyltransferase identical to anthranilate phosphoribosyltransferase, chloroplast precursor (EC 2.4.2.18) SP:Q02166 from [Arabidopsis thaliana]" 9 1 22 10 At5g18140 DNAJ heat shock N-terminal domain-containing protein similar to DnaJ protein Tid-1 [Homo sapiens] GI:17066575; contains Pfam profile PF00226 DnaJ domain 9 1 22 11 At5g18200 expressed protein 9 1 22 12 At5g20750 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 9 1 22 13 At5g20830 sucrose synthase / sucrose-UDP glucosyltransferase (SUS1) identical to SP|P49040 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} 9 1 22 14 At5g20970 heat shock family protein contains similarity to Swiss-Prot:P27397 18.0 kDa class I heat shock protein [Daucus carota] 9 1 22 15 At5g21040 F-box family protein / WD-40 repeat family protein contains G-protein beta WD-40 repeats 9 1 22 16 At5g21326 "protein kinase family protein / NAF domain-containing protein contains Pfam profiles: PF00069 protein kinase domain, PF03822 NAF domain" 9 1 22 17 At5g21930 "ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein / heavy-metal-associated domain-containing protein contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profiles PF00403: Heavy-metal-associated domain, PF00702: haloacid dehalogenase-like hydrolase" 9 1 22 18 At5g22070 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 9 1 22 19 At5g22130 "mannosyltransferase family protein similar to mannosyltransferase from Rattus norvegicus [GI:11414877], Homo sapiens [GI:11414879]; contains Pfam profile PF05007: Mannosyltransferase (PIG-M)" 9 1 22 20 At5g24760 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase from Solanum tuberosum [SP|p14673]; contains Pfam zinc-binding dehydrogenase domain PF00107" 9 1 22 21 At5g24810 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 9 1 22 22 At5g24980 expressed protein 9 1 22 23 At5g25040 integral membrane transporter family protein similar to biopterin transporter (GI:3377706) [Leishmania mexicana]; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; Interpro IPR001991/ PR00173 Sodium:dicarboxylater symporter family 9 1 22 24 At5g25220 homeobox protein knotted-1 like 3 (KNAT3) identical to homeobox protein knotted-1 like 3 (KNAT3) SP:P48000 from [Arabidopsis thaliana] 9 1 22 25 At5g25270 expressed protein 9 1 23 1 At5g25415 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 9 1 23 2 At5g25460 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 9 1 23 3 At5g28440 expressed protein 9 1 23 4 At5g28482 "hypothetical protein similar to At2g06630, At2g12120, At1g45090, At2g05470" 9 1 23 5 At5g28640 SSXT protein-related / glycine-rich protein contains weak hit to Pfam profile PF05030: SSXT protein (N-terminal region) 9 1 23 6 At5g28720 hypothetical protein 9 1 23 7 At5g28860 hypothetical protein 9 1 23 8 At5g28930 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 9 1 23 9 At5g29624 DC1 domain-containing protein contains Pfam PF03107: DC1 domain 9 1 23 10 At5g32070 hypothetical protein 9 1 23 11 At5g37460 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 9 1 23 12 At5g37500 "guard cell outward rectifying K+ channel (GORK) identical to guard cell outward rectifying K+ channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380; member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+ channel family, PMID:11500563" 9 1 23 13 At5g37660 "receptor-like protein kinase-related similar to receptor-like protein kinase 4 (GI:13506745) {Arabidopsis thaliana}; embryonic abundant protein EMB24, white spruce, PIR:T09251; contains Pfam PF01657: Domain of unknown function" 9 1 23 14 At5g37730 expressed protein 9 1 23 15 At5g37910 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 9 1 23 16 At5g37970 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292], theobromine synthase [Coffea arabica][GI:13365751], SAM:jasmonic acid carboxyl methyltransferase [GI:13676829]" 9 1 23 17 At5g38140 histone-like transcription factor (CBF/NF-Y) family protein similar to CCAAT-binding transcription factor subunit AAB-1 (GI:2583171) [Neurospora crassa]; contains a CBF/NF-Y subunit signature (PDOC00578) presernt in members of histone-like transcription factor family; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 1 23 18 At5g38195 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 9 1 23 19 At5g41060 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 9 1 23 20 At5g41100 expressed protein 9 1 23 21 At5g41270 expressed protein 9 1 23 22 At5g41320 expressed protein 9 1 23 23 At5g41505 hypothetical protein 9 1 23 24 At5g41560 expressed protein 9 1 23 25 At5g41700 "ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131" 9 1 24 1 At5g41760 nucleotide-sugar transporter family protein low similarity to SP|Q61420 CMP-sialic acid transporter {Mus musculus}; contains Pfam profile PF04142: Nucleotide-sugar transporter 9 1 24 2 At5g44410 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 9 1 24 3 At5g44460 "calcium-binding protein, putative similar to SP|Q09011 Calcium-binding protein CAST {Solanum tuberosum}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 9 1 24 4 At5g44620 cytochrome P450 family protein similar to cytocrhome P450 monooxygenase (GI:14334057) [Gossypium arboreum] 9 1 24 5 At5g44670 expressed protein contains Pfam:PF01697 Domain of unknown function 9 1 24 6 At5g44790 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) identical to SP|Q9S7J8 9 1 24 7 At5g44860 expressed protein strong similarity to unknown protein (gb AAC79135.1) 9 1 24 8 At5g45020 expressed protein 9 1 24 9 At5g45080 disease resistance protein-related weak similarity to disease resistance protein rps4-RLD [Arabidopsis thaliana] GI:5823585; contains Pfam profile PF01582: TIR domain 9 1 24 10 At5g47600 "heat shock protein-related contains weak similarity to Heat shock 22 kDa protein, mitochondrial precursor (Swiss-Prot:P46254) [Pisum sativum]" 9 1 24 11 At5g47650 "MutT/nudix family protein similar to Nucleoside diphosphate-linked moiety X motif 6 (Protein GFG) from {Xenopus laevis} SP|P13420, {Homo sapiens} SP|P53370; contains Pfam profile PF00293: NUDIX domain" 9 1 24 12 At5g47820 kinesin-like protein (FRA1) identical to kinesin-like protein [Arabidopsis thaliana] GI:27260890; contains Pfam profile PF00225: Kinesin motor domain 9 1 24 13 At5g47850 "protein kinase, putative contains similarity to cytokinin-regulated kinase 1 [Nicotiana tabacum] gi|10998537|gb|AAG25966; contains protein kinase domain, Pfam:PF00069" 9 1 24 14 At5g48030 "DNAJ heat shock protein, mitochondrially targeted (GFA2) 99.8% identical to mitochondrially targeted DnaJ protein GFA2 [Arabidopsis thaliana] GI:21429604; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats)" 9 1 24 15 At5g48090 expressed protein ; expression supported by MPSS 9 1 24 16 At5g48250 zinc finger (B-box type) family protein contains similarity to CONSTANS homologs 9 1 24 17 At5g48320 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 1 24 18 At5g50990 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 1 24 19 At5g51050 "mitochondrial substrate carrier family protein similar to peroxisomal Ca-dependent solute carrier [Oryctolagus cuniculus] GI:2352427; contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain" 9 1 24 20 At5g51195 hypothetical protein 9 1 24 21 At5g51230 embryonic flower 2 (EMF2) identical to embryonic flower 2 [Arabidopsis thaliana] GI:14276050; supporting cDNA gi|14276049|dbj|AB053171.1| 9 1 24 22 At5g51410 LUC7 N_terminus domain-containing protein similar to cisplatin resistance-associated overexpressed protein [Homo sapiens] GI:6899846; contains Pfam profile PF03194: LUC7 N_terminus 9 1 24 23 At5g51460 trehalose-6-phosphate phosphatase (TPPA) identical to trehalose-6-phosphate phosphatase (AtTPPA) [Arabidopsis thaliana] GI:2944178 9 1 24 24 At5g51620 expressed protein 9 1 24 25 At5g51660 "cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein similar to SP|Q9EPU4 Cleavage and polyadenylation specificity factor, 160 kDa subunit (CPSF 160 kDa subunit) {Mus musculus}; contains Pfam profile PF03178: CPSF A subunit region" 9 1 25 1 At5g54410 hypothetical protein 9 1 25 2 At5g54470 zinc finger (B-box type) family protein similar to unknown protein (pir||T05755) 9 1 25 3 At5g54600 "50S ribosomal protein L24, chloroplast (CL24) identical to SP|P92959 50S ribosomal protein L24, chloroplast precursor {Arabidopsis thaliana}" 9 1 25 4 At5g54660 heat shock protein-related contains weak similarity to 17.6 kDa class I heat shock protein (HSP 17.6) (Swiss-Prot:P13853) [Arabidopsis thaliana] 9 1 25 5 At5g54830 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein contains Pfam PF03351: DOMON domain 9 1 25 6 At5g54860 integral membrane transporter family protein contains 10 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae] 9 1 25 7 At5g55000 "potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein contains Pfam profiles PF02214: K+ channel tetramerisation domain, PF00805: Pentapeptide repeats (8 copies)" 9 1 25 8 At5g55060 expressed protein 9 1 25 9 At5g57740 "zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) and Pfam profile: PF00023 ankyrin repeat" 9 1 25 10 At5g57790 expressed protein 9 1 25 11 At5g57920 plastocyanin-like domain-containing protein 9 1 25 12 At5g57980 "eukaryotic rpb5 RNA polymerase subunit family protein similar to SP|P19388 DNA-directed RNA polymerase II 23 kDa polypeptide (EC 2.7.7.6) {Homo sapiens}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 9 1 25 13 At5g58140 "protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441" 9 1 25 14 At5g58200 expressed protein 9 1 25 15 At5g58330 "malate dehydrogenase [NADP], chloroplast, putative strong similiarity to chloroplast NADP-dependent malate dehydrogenase (EC 1.1.1.82) SP|O48902 {Medicago sativa}, SP|P21528 {Pisum sativum}, SP|Q05145 {Mesembryanthemum crystallinum}, SP|P46489 {Flaveria bidentis}, [Flaveria trinervia] GI:726334, SP|P17606I {Sorghum bicolor}; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 9 1 25 16 At5g58370 expressed protein 9 1 25 17 At5g60970 "TCP family transcription factor, putative putative basic helix-loop-helix DNA binding protein TCP2, Arabidopsis thaliana, EMBL:AF072691" 9 1 25 18 At5g61020 YT521-B-like family protein contains Pfam profile PF04146: YT521-B-like family 9 1 25 19 At5g61170 "40S ribosomal protein S19 (RPS19C) 40S ribsomal protein S19, Oryza sativa, SWISSPROT:RS19_ORYSA" 9 1 25 20 At5g61230 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 1 25 21 At5g61390 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 9 1 25 22 At5g61430 no apical meristem (NAM) family protein PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 9 1 25 23 At5g61570 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 1 25 24 At5g61620 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 1 25 25 At5g64350 FK506-binding protein (FKBP12) / immunophilin identical to immunophilin (GI:2104957) [Arabidopsis thaliana] 9 1 26 1 At5g64380 "fructose-1,6-bisphosphatase family protein similar to SP|P22418 Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) {Spinacia oleracea}; contains Pfam profile PF00316: fructose-1,6-bisphosphatase" 9 1 26 2 At5g64510 expressed protein 9 1 26 3 At5g64560 "magnesium transporter CorA-like family protein (MRS2-2) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 9 1 26 4 At5g64690 neurofilament triplet H protein-related contains weak similarity to neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) [Homo sapiens] 9 1 26 5 At5g64740 "cellulose synthase, catalytic subunit, putative similar to gi:2827141 cellulose synthase catalytic subunit (Ath-A), Arabidopsis thaliana" 9 1 26 6 At5g64880 expressed protein 9 1 26 7 At5g64930 "CPR5 protein, putative Constitutive expressor of Pathogensis Related genes 5 (cpr5); regulator of disease resistance and senescence (Plant J. (2001)26(4)409-420." 9 1 26 8 At5g67440 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 9 1 26 9 At5g67490 expressed protein 9 1 26 10 At1g25025 hypothetical protein 9 1 26 11 At1g58936 hypothetical protein 9 1 26 12 ath-MIR161 miRNA gene Arabidopsis thaliana miR161 stem-loop 9 1 26 13 ath-MIR156h miRNA gene Arabidopsis thaliana miR156h stem-loop 9 1 26 14 ath-MIR166d miRNA gene Arabidopsis thaliana miR166d stem-loop 9 1 26 15 ath-MIR171a miRNA gene Arabidopsis thaliana miR171a stem-loop 9 1 26 16 At3g43740 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana] gi|14573457|gb|AAK68073" 9 1 26 17 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 9 1 26 18 At3g43980 "40S ribosomal protein S29 (RPS29A) ribosomal protein S29, rat, PIR:S30298" 9 1 26 19 At3g44060 F-box family protein contains F-box domain Pfam:PF00646 9 1 26 20 At3g44210 hypothetical protein 9 1 26 21 At3g44260 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q9UFF9 CCR4-NOT transcription complex, subunit 8 (CAF1-like protein, CALIFp) [Homo sapiens]" 9 1 26 22 At3g44480 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 1 26 23 At3g44540 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein" 9 1 26 24 Blank Blank 9 1 26 25 Blank Blank 9 2 1 1 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 9 2 1 2 At5g46430 60S ribosomal protein L32 (RPL32B) 9 2 1 3 Alien1 Control: Stratagene Spotreport Alien Oligo 9 2 1 4 Alien7 Control: Stratagene Spotreport Alien Oligo 9 2 1 5 atc03 Randomly generated negative control 9 2 1 6 atc09 Randomly generated negative control 9 2 1 7 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 9 2 1 8 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 9 2 1 9 At1g02710 glycine-rich protein 9 2 1 10 At1g02770 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 9 2 1 11 At1g02880 "thiamin pyrophosphokinase, putative similar to thiamin pyrophosphokinase [Mus musculus] gi|6468206|dbj|BAA87040" 9 2 1 12 At1g02920 "glutathione S-transferase, putative similar to glutathione S-transferase GI:860955 from [Hyoscyamus muticus]; supported by cDNA GI:443697." 9 2 1 13 At1g03030 "phosphoribulokinase/uridine kinase family protein contains Pfam PF00485: Phosphoribulokinase / Uridine kinase family; Belongs to Interpro IPR006083 Phosphoribulokinase/uridine kinase family; similar to Uridine kinase (Uridine monophosphokinase) (SP:P27515) {Saccharomyces cerevisiae}; ESTs gb|AA585719, gb|AA728503 and gb|T22272 come from this gene" 9 2 1 14 At1g03070 expressed protein low similarity to N-methyl-D-aspartate receptor-associated protein [Drosophila melanogaster] GI:567104; contains Pfam profile PF01027: Uncharacterized protein family UPF0005 9 2 1 15 At1g03220 "extracellular dermal glycoprotein, putative / EDGP, putative similar to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741" 9 2 1 16 At1g03280 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein contains Pfam profile: PF02002 TFIIE alpha subunit 9 2 1 17 At1g05950 expressed protein 9 2 1 18 At1g06020 pfkB-type carbohydrate kinase family protein similar to fructokinase GI:2102693 from [Lycopersicon esculentum] 9 2 1 19 At1g06150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 1 20 At1g06190 expressed protein 9 2 1 21 At1g06380 ribosomal protein-related similar to PBK1 protein (GI:3668141) {Homo sapiens}; weakly similar to 60S ribosomal protein L10a. (SP:Q963B6) [Fall armyworm] {Spodoptera frugiperda} 9 2 1 22 At1g06430 "FtsH protease, putative similar to zinc dependent protease GI:7650138 from [Arabidopsis thaliana]" 9 2 1 23 At1g06620 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 9 2 1 24 At1g06650 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 9 2 1 25 At1g09160 protein phosphatase 2C-related / PP2C-related similar to GB:AAC16260 9 2 2 1 At1g09210 calreticulin 2 (CRT2) identical to SP|Q38858 Calreticulin 2 precursor {Arabidopsis thaliana} 9 2 2 2 At1g09370 pectinesterase inhibitor domain-containing protein 9 2 2 3 At1g09420 "glucose-6-phosphate 1-dehydrogenase, putative / G6PD, putative similar to SP|Q43839 Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) {Solanum tuberosum}; contains Pfam profiles PF02781: Glucose-6-phosphate dehydrogenase C-terminal, PF00479: Glucose-6-phosphate dehydrogenase NAD binding domain; gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally" 9 2 2 4 At1g09570 phytochrome A (PHYA) identical to SP|P14712 Phytochrome A {Arabidopsis thaliana} 9 2 2 5 At1g09620 "tRNA synthetase class I (I, L, M and V) family protein similar to cytosolic leucyl-tRNA synthetase [Candida albicans] GI:9858190; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 9 2 2 6 At1g09770 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 2 2 7 At1g09812 expressed protein ; expression supported by MPSS 9 2 2 8 At1g12380 expressed protein 9 2 2 9 At1g12440 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 9 2 2 10 At1g12620 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 9 2 2 11 At1g12680 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 2 12 At1g12845 expressed protein 9 2 2 13 At1g12900 "glyceraldehyde 3-phosphate dehydrogenase, chloroplast, putative / NADP-dependent glyceraldehydephosphate dehydrogenase, putative similar to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) {Arabidopsis thaliana}; contains Pfam profiles PF02800: Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain, PF00044: Glyceraldehyde 3-phosphate dehydrogenase NAD binding domain" 9 2 2 14 At1g13080 "cytochrome P450 family protein identical to gb|D78605 cytochrome P450 monooxygenase from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and gb|T43466 come from this gene" 9 2 2 15 At1g13140 cytochrome P450 family protein similar to Cytochrome P450 86A2 (SP:O23066) [Arabidopsis thaliana]; contains Pfam PF|00067 Cytochrome P450 family 9 2 2 16 At1g15790 expressed protein 9 2 2 17 At1g15840 expressed protein 9 2 2 18 At1g15990 "cyclic nucleotide-regulated ion channel, putative (CNGC7) similar to cyclic nucleotide and calmodulin-regulated ion channel protein GI:4581207 from [Arabidopsis thaliana]" 9 2 2 19 At1g16040 "expressed protein similar To Phosphatidylinositol-glycan biosynthesis, class F protein (PIG-F). (Mouse) (SP:O09101) [Mus musculus]; contains six transmembrane domains;" 9 2 2 20 At1g16225 "syntaxin-related family protein similar to syntaxin of plants 51 [Arabidopsis thaliana] GI:13811644, syntaxin of plants 52 [Arabidopsis thaliana] GI:13811646" 9 2 2 21 At1g16280 "DEAD/DEAH box helicase, putative similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member of PF|00270 DEAD/DEAH box helicase family" 9 2 2 22 At1g16440 "protein kinase, putative similar to viroid symptom modulation protein [Lycopersicon esculentum] gi|7672777|gb|AAF66637" 9 2 2 23 At1g16500 expressed protein 9 2 2 24 At1g19290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 2 25 At1g19350 "brassinosteroid signalling positive regulator, putative similar to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490" 9 2 3 1 At1g19510 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 9 2 3 2 At1g19570 "dehydroascorbate reductase, putative similar to GB:BAA90672 from (Oryza sativa)" 9 2 3 3 At1g19750 transducin family protein / WD-40 repeat family protein similar to Cockayne syndrome complementaion group A proteins (GI:18077663)[Mus musculus] and (SP:Q13216)[Homo sapiens]; confirmed by full-length cDNA GI:15982896 9 2 3 4 At1g19835 expressed protein contains Pfam PF05911: Plant protein of unknown function (DUF869) 9 2 3 5 At1g20010 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} 9 2 3 6 At1g20080 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 9 2 3 7 At1g22870 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 3 8 At1g22910 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); similar to GB:AAC33496 9 2 3 9 At1g23040 "hydroxyproline-rich glycoprotein family protein contains proline-rich domains, INTERPRO:IPR000694" 9 2 3 10 At1g23080 "auxin efflux carrier protein, putative similar to efflux carrier of polar auxin transport [Brassica juncea] gi|12331173|emb|CAC24691" 9 2 3 11 At1g23230 expressed protein 9 2 3 12 At1g23270 hypothetical protein 9 2 3 13 At1g23420 inner no outer protein (INO) identical to INNER NO OUTER (INO) [Arabidopsis thaliana] GI:6684816 9 2 3 14 At1g23465 signal peptidase-related 9 2 3 15 At1g27150 expressed protein 9 2 3 16 At1g27210 expressed protein 9 2 3 17 At1g27380 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 9 2 3 18 At1g27410 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 9 2 3 19 At1g27560 "F-box family protein-related similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 9 2 3 20 At1g27600 "glycosyl transferase family 43 protein similar to Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, Rattus norvegicus [SP|O35789], Homo sapiens [SP|Q9P2W7]; contains Pfam domain Glycosyltransferase family 43 [PF03360]" 9 2 3 21 At1g27760 interferon-related developmental regulator family protein / IFRD protein family contains Pfam PF05004: Interferon-related developmental regulator (IFRD); similar to IFR1 protein GI:16580630 [Gallus gallus]; similar to Interferon-related developmental regulator 1 (TPA induced sequence 7) (TIS7 protein) (SP:P19182) {Mus musculus} 9 2 3 22 At1g27810 "hypothetical protein similar to At3g43370, At2g14780, At1g34710, At3g42760, At1g25784, At4g08890" 9 2 3 23 At1g30755 expressed protein contains Pfam domain PF05003: protein of unknown function (DUF668) 9 2 3 24 At1g30800 expressed protein ; expression supported by MPSS 9 2 3 25 At1g30970 "zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type" 9 2 4 1 At1g31050 expressed protein 9 2 4 2 At1g31230 bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH nearly identical to gb|X71364 [PIR|S46497] aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain 9 2 4 3 At1g31290 "PAZ domain-containing protein / piwi domain-containing protein contains Pfam profiles PF02170: PAZ domain, PF02171: Piwi domain" 9 2 4 4 At1g31460 expressed protein 9 2 4 5 At1g31510 "F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; ; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]" 9 2 4 6 At1g34560 hypothetical protein 9 2 4 7 At1g34630 expressed protein 9 2 4 8 At1g35080 hypothetical protein 9 2 4 9 At1g35160 "14-3-3 protein GF14 phi (GRF4) identical to GF14 protein phi chain GI:1493805, SP:P46077 from [Arabidopsis thaliana]" 9 2 4 10 At1g35365 hypothetical protein 9 2 4 11 At1g35440 "cyclin family protein similar to SP|O75909 Cyclin K {Homo sapiens}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 9 2 4 12 At1g35620 thioredoxin family protein similar to SP|Q43116 Protein disulfide isomerase precursor (PDI) (EC 5.3.4.1) {Ricinus communis}; contains Pfam profile PF00085: Thioredoxin 9 2 4 13 At1g35663 hypothetical protein 9 2 4 14 At1g47300 F-box family protein similar to hypothetical protein GB:AAD22295 GI:4544385 from [Arabidopsis thaliana] 9 2 4 15 At1g47370 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 9 2 4 16 At1g47540 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 9 2 4 17 At1g47600 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to thioglucosidase (GI:871992) [Arabidopsis thaliana] 9 2 4 18 At1g47780 acyl-protein thioesterase-related contains similarity to acyl-protein thioesterase-1 [Homo sapiens] gi|9965372|gb|AAG10063 contains similarity to acyl-protein thioesterase-1 [Homo sapiens] gi|9965372|gb|AAG10063 9 2 4 19 At1g47813 hypothetical protein similar to hypothetical protein GB:AAF19740 GI:6634732 from [Arabidopsis thaliana] 9 2 4 20 At1g48010 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 9 2 4 21 At1g48060 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 9 2 4 22 At1g51090 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 9 2 4 23 At1g51150 DegP protease family contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana] 9 2 4 24 At1g51340 MATE efflux family protein contains Pfam profile PF01554: MatE 9 2 4 25 At1g51370 F-box family protein contains F-box domain Pfam:PF00646 9 2 5 1 At1g51520 "expressed protein contains a weak hit to PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 9 2 5 2 At1g51580 KH domain-containing protein 9 2 5 3 At1g51700 "Dof-type zinc finger domain-containing protein (ADOF1) identical to cDNA adof1 mRNA for dof zinc finger protein, GI:3608260; contains Pfam profile PF02701: Dof domain, zinc finger" 9 2 5 4 At1g51760 IAA-amino acid hydrolase 3 / IAA-Ala hydrolase 3 (IAR3) identical to IAA-Ala hydrolase (IAR3) [Arabidopsis thaliana] GI:3421384 9 2 5 5 At1g54380 "spliceosome protein-related contains Pfam domain, PF04938: Survival motor neuron (SMN) interacting protein 1 (SIP1)" 9 2 5 6 At1g54430 hypothetical protein 9 2 5 7 At1g54610 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 9 2 5 8 At1g54690 "histone H2A, putative strong similarity to histone H2A GI:3204129 SP|O65759 from Cicer arietinum, Picea abies SP|P35063; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 9 2 5 9 At1g54840 expressed protein 9 2 5 10 At1g54890 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein (EMB7) GI:1350543 from [Picea glauca] 9 2 5 11 At1g55050 expressed protein ; expression supported by MPSS 9 2 5 12 At1g55120 "beta-fructosidase, putative / beta-fructofuranosidase, putative similar to beta-fructofuranosidase GI:402740" 9 2 5 13 At1g59620 "disease resistance protein (CC-NBS class), putative domain signature CC-NBS exists, suggestive of a disease resistance protein." 9 2 5 14 At1g59660 "nucleoporin family protein contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family" 9 2 5 15 At1g59810 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 9 2 5 16 At1g59840 expressed protein 9 2 5 17 At1g59990 "DEAD/DEAH box helicase, putative (RH22) similar to RNA helicase GI:3776015 from [Arabidopsis thaliana]; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00270: DEAD/DEAH box helicase; matches EST OAO811-2" 9 2 5 18 At1g60040 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 9 2 5 19 At1g60250 zinc finger (B-box type) family protein contains similarity to zinc finger protein GI:3618320 from [Oryza sativa] 9 2 5 20 At1g60360 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 9 2 5 21 At1g63220 C2 domain-containing protein similar to phloem protein RPP16 [Oryza sativa (japonica cultivar-group)] GI:21998839; contains Pfam profile PF00168: C2 domain 9 2 5 22 At1g63260 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 9 2 5 23 At1g63430 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profiles: PF00069 Eukaryotic protein kinase domain, PF00560 Leucine Rich Repeat; contains 1 predicted transmembrane domain" 9 2 5 24 At1g63490 transcription factor jumonji (jmjC) domain-containing protein similar to PLU-1 protein (GI:4902724) [Homo sapiens] and PLU1 (GI:22726257) [Mus musculus]; similar to Retinoblastoma-binding protein 2 (RBBP-2) (SP:P29375) {Homo sapiens}; contains Pfam PF02373: jmjC domain 9 2 5 25 At1g63650 basic helix-loop-helix (bHLH) family protein similar to bHLH transcription factor (JAF13) GB:AAC39455 [Petunia x hybrida]; contains Pfam profile: PF00010 Helix-loop-helix DNA-binding domain 9 2 6 1 At1g63690 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 9 2 6 2 At1g63850 PRLI-interacting factor-related similar to PRLI-interacting factor G (GI:11139264) [Arabidopsis thaliana]; contains Prosite PS00037: Myb DNA-binding domain repeat signature 1 9 2 6 3 At1g63880 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 2 6 4 At1g66670 ATP-dependent Clp protease proteolytic subunit (ClpP3) identical to ATP-dependent Clp protease (nClpP3) GI:5360591 [Arabidopsis thaliana] 9 2 6 5 At1g66740 "ASF1-like anti-silencing protein, putative similar to SP|P32447 Anti-silencing protein 1 {Saccharomyces cerevisiae}; contains Pfam profile PF04729: Anti-silencing protein, ASF1-like; supporting cDNA gi|27530935|dbj|AB078339.1|" 9 2 6 6 At1g66900 expressed protein 9 2 6 7 At1g66940 protein kinase-related 9 2 6 8 At1g67100 LOB domain protein 40 / lateral organ boundaries domain protein 40 (LBD40) identical to SP|Q9ZW96 LOB domain protein 40 {Arabidopsis thaliana} 9 2 6 9 At1g67160 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 9 2 6 10 At1g67330 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 9 2 6 11 At1g67400 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 9 2 6 12 At1g70040 hypothetical protein 9 2 6 13 At1g70100 expressed protein 9 2 6 14 At1g70260 nodulin MtN21 family protein contains similarity to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 9 2 6 15 At1g70320 "ubiquitin-protein ligase 2 (UPL2) nearly identical to ubiquitin-protein ligase 2 [Arabidopsis thaliana] GI:7108523; E3, HECT-domain protein family; similar to ubiquitin-protein ligase 2 GI:7108523 from [Arabidopsis thaliana]" 9 2 6 16 At1g70480 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 9 2 6 17 At1g70505 expressed protein 9 2 6 18 At1g70650 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 9 2 6 19 At1g70710 "endo-1,4-beta-glucanase (EGASE) / cellulase identical to endo-1,4-beta-glucanase GB:CAA67157 GI:2440035 from [Arabidopsis thaliana]" 9 2 6 20 At1g73560 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to GI:2627141 from (Picea abies) (Plant Mol. Biol. 42 (3), 461-478 (2000)); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 9 2 6 21 At1g73600 "phosphoethanolamine N-methyltransferase 3, putative (NMT3) strong similarity to SP|Q9FR44 Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to SP|Q9C6B9 Putative phosphoethanolamine N-methyltransferase 3 {Arabidopsis thaliana}" 9 2 6 22 At1g73740 "glycosyl transferase family 28 protein similar to UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)-pyrophosphoryl-undecaprenol N-acetylglucosamine transferase GB:O07670 [SP|O07670] from Enterococcus hirae, ]SP|O07109] from Enterococcus faecalis; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain" 9 2 6 23 At1g73800 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 9 2 6 24 At1g73960 expressed protein similar to TATA binding protein associated factor (GI:2827282) [Homo sapiens]; similar to Transcription initiation factor TFIID 150 kDa subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325) [Drosophila melanogaster] 9 2 6 25 At1g74010 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088 9 2 7 1 At1g74170 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 9 2 7 2 At1g74230 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sylvestris] 9 2 7 3 AT5G57480 PC-1 B04 9 2 7 4 3XSSC PC-1 B16 9 2 7 5 AT1G29930 PC-1 F04 9 2 7 6 3XSSC PC-1 F16 9 2 7 7 AT3G44150 PC-1 J04 9 2 7 8 3XSSC PC-1 J16 9 2 7 9 AT4G00810 PC-1 N04 9 2 7 10 3XSSC PC-1 N16 9 2 7 11 At1g77010 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 9 2 7 13 At1g77220 expressed protein contains Pfam profile PF03619: Domain of unknown function 9 2 7 14 At1g77280 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 9 2 7 15 At1g77460 "C2 domain-containing protein / armadillo/beta-catenin repeat family protein similar to CCLS 65 [Silene latifolia] GI:2570102; contains Pfam profiles PF00514: Armadillo/beta-catenin-like repeat, PF00168: C2 domain" 9 2 7 16 At1g77500 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 9 2 7 17 At1g77680 ribonuclease II family protein weak similarity to SP|P37202 Mitotic control protein dis3 {Schizosaccharomyces pombe}; contains Pfam profile PF00773: RNB-like protein 9 2 7 18 At1g77740 "1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative strong similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 9 2 7 19 At1g80280 "hydrolase, alpha/beta fold family protein contains Pfam profile: PF00561 alpha/beta hydrolase fold" 9 2 7 20 At1g80340 gibberellin 3-beta-dioxygenase / gibberellin 3 beta-hydroxylase (GA4H) nearly identical to gibberellin 3 beta-hydroxylase GI:3982753 GB:AAC83647 [Arabidopsis thaliana] 9 2 7 21 At1g80490 WD-40 repeat family protein contains 9 WD-40 repeats domain (PF00400) (6 weak) 9 2 7 22 At1g80550 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 7 23 At1g80730 "zinc finger (C2H2 type) family protein (ZFP1) identical to zinc finger protein, ZFP1 gi|790673|gb|AAA87297; contains zinc finger, C2H2 type, domain, Prosite:PS00028" 9 2 7 24 At1g80780 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 9 2 7 25 At1g80940 expressed protein 9 2 8 1 At1g80980 expressed protein 9 2 8 2 At2g03935 hypothetical protein no suitable start codon could be identified. This may be a pseudogene. 9 2 8 3 At2g04032 "metal transporter, putative (ZIP7) identical to putative metal transporter ZIP7 [Arabidopsis thaliana] gi|17385788|gb|AAL38434; similar to iron-regulated transporter 1 [Lycopersicon esculentum] gi|9716481|gb|AAF97509; similar to root iron transporter protein [Pisum sativum] gi|3153889|gb|AAC17441; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 9 2 8 4 At2g04170 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to NtN2 [Medicago truncatula] GI:3776084; contains Pfam profile PF00917: MATH domain 9 2 8 5 At2g04270 glycoside hydrolase starch-binding domain-containing protein contains Pfam profile: PF00686 starch binding domain 9 2 8 6 At2g04440 NUDIX/mutT hydrolase family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 9 2 8 7 At2g04515 expressed protein 9 2 8 8 At2g04690 cellular repressor of E1A-stimulated genes (CREG) family contains 1 transmembrane domain; similar to CREG2 (GI:24371079) [Homo sapiens] and (GI:24371081) [Mus musculus]; similar to cellular repressor of E1A-stimulated genes CREG (GI:3550343) [Homo sapiens] 9 2 8 9 At2g04790 expressed protein 9 2 8 10 At2g11570 hypothetical protein 9 2 8 11 At2g11830 hypothetical protein 9 2 8 12 At2g12405 hypothetical protein 9 2 8 13 At2g12685 hypothetical protein 9 2 8 14 At2g13350 C2 domain-containing protein very low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 9 2 8 15 At2g13440 glucose-inhibited division family A protein similar to GidA from Pseudomonas syringae [GI:10764670]; contains Pfam profile PF01134 Glucose inhibited division protein A 9 2 8 16 At2g13690 "PRLI-interacting factor, putative similar to PRLI-interacting factor G [Arabidopsis thaliana] GI:11139264 (PMID:9765207); supporting cDNA gi|26450291|dbj|AK117606.1|" 9 2 8 17 At2g13800 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 9 2 8 18 At2g17090 "protein kinase family protein similar to Arabidopsis thaliana APK1A [SP|Q06548], APK1B [SP|P46573]; contains Pfam profile: PF00069 Protein kinase domain" 9 2 8 19 At2g17160 protein kinase-related identical to hypothetical protein GB:AAB81676; supported by tandem duplication of protein kinase family (GI:4584350) (TIGR_Ath1:At2g17170) [Arabidopsis thaliana] 9 2 8 20 At2g17320 pantothenate kinase-related similar to Probable pantothenate kinase 1 (Pantothenic acid kinase 1) (Swiss-Prot:Q8L5Y9) [Arabidopsis thaliana]; similar to Pantothenate kinase 4 (Pantothenic acid kinase 4) (hPanK4) (Swiss-Prot:Q9NVE7) [Homo sapiens]; contains Pfam PF01937: Protein of unknown function 9 2 8 21 At2g17390 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 2 8 22 At2g17590 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 2 8 23 At2g17660 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 9 2 8 24 At2g17790 vacuolar protein sorting-associated protein 35 family protein / VPS35 family protein similar to vacuolar protein sorting 35 [Mus musculus] GI:11875394; contains Pfam profile PF03635: Vacuolar protein sorting-associated protein 35 9 2 8 25 At2g17850 senescence-associated family protein contains similarity to ketoconazole resistant protein GI:928938 from [Arabidopsis thaliana] and din1 GI:2190012 from [Raphanus sativus];contains a thiosulfate sulfurtransferase domain 9 2 9 1 At2g20613 hypothetical protein 9 2 9 2 At2g20630 "protein phosphatase 2C, putative / PP2C, putative " 9 2 9 3 At2g20790 expressed protein weak similarity to clathrin-adaptor medium chain apm 3 (GI:12000359) [Dictyostelium discoideum]; weak similarity to Adapter-related protein complex 3 mu 2 subunit (Clathrin coat assembly protein AP47 homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2) (HA1 47 kDa subunit homolog 2) (P47B) (Swiss-Prot:P53678) [Rattus norvegicus] 9 2 9 4 At2g20815 expressed protein contains Pfam profile: PF04484 family of unknown function (DUF566); expression supported by MPSS 9 2 9 5 At2g20940 expressed protein 9 2 9 6 At2g20970 hypothetical protein 9 2 9 7 At2g21160 "translocon-associated protein alpha (TRAP alpha) family protein contains Pfam profile: PF03896 translocon-associated protein (TRAP), alpha subunit" 9 2 9 8 At2g21200 "auxin-responsive protein, putative similar to small auxin-up regulated protein SAUR (GI:3043536) [ Raphanus sativus]" 9 2 9 9 At2g24030 expressed protein and genefinder 9 2 9 10 At2g24080 "F-box family protein-related similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 9 2 9 11 At2g24270 "NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative similar to NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (NON-phosphorylating glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase [NADP+]) [Nicotiana plumbaginifolia] SWISS-PROT:P93338" 9 2 9 12 At2g24320 hypothetical protein 9 2 9 13 At2g24500 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 9 2 9 14 At2g24560 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 GI:15054386 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 9 2 9 15 At2g24720 "glutamate receptor family protein (GLR2.2) plant glutamate receptor family, PMID:11379626" 9 2 9 16 At2g24790 zinc finger (B-box type) family protein 9 2 9 17 At2g27500 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 9 2 9 18 At2g27535 ribosomal protein L10A family protein contains similarity to Swiss-Prot:P53029 ribosomal protein L10A [Arabidopsis thaliana] 9 2 9 19 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 9 2 9 20 At2g27770 expressed protein 9 2 9 21 At2g27920 serine carboxypeptidase S10 family protein similar to retinoid-inducible serine carboxypeptidase precursor (GI:15146429) [Mus musculus] 9 2 9 22 At2g27980 expressed protein 9 2 9 23 At2g28130 expressed protein 9 2 9 24 At2g28190 "superoxide dismutase [Cu-Zn], chloroplast (SODCP) / copper/zinc superoxide dismutase (CSD2) identical to GP:3273753:AF061519" 9 2 9 25 At2g30940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 10 1 At2g30970 "aspartate aminotransferase, mitochondrial / transaminase A (ASP1) identical to SP|P46643 Aspartate aminotransferase, mitochondrial precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}" 9 2 10 2 At2g31110 expressed protein 9 2 10 3 At2g31170 tRNA synthetase class I (C) family protein similar to cysteine-tRNA ligase [Escherichia coli] GI:41203; contains Pfam profile PF01406: tRNA synthetases class I (C) 9 2 10 4 At2g31340 expressed protein 9 2 10 5 At2g31370 bZIP transcription factor (POSF21) identical to GB:Q04088 9 2 10 6 At2g31550 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 9 2 10 7 At2g31590 hypothetical protein 9 2 10 8 At2g34200 zinc finger (C3HC4-type RING finger) family protein 9 2 10 9 At2g34260 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina} 9 2 10 10 At2g34360 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 9 2 10 11 At2g34400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 10 12 At2g34540 expressed protein 9 2 10 13 At2g34590 "transketolase family protein similar to SP|O66113 Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1). {Zymomonas mobilis}; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain" 9 2 10 14 At2g34770 fatty acid hydroxylase (FAH1) identical to fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147 from [Arabidopsis thaliana] 9 2 10 15 At2g34830 WRKY family transcription factor 9 2 10 16 At2g37430 "zinc finger (C2H2 type) family protein (ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 2 10 17 At2g37460 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 9 2 10 18 At2g37620 actin 1 (ACT1) identical to SP|P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} 9 2 10 19 At2g37680 phytochrome A specific signal transduction component (PAT3) / far-red elongated hypocotyl protein 1 (FHY1) identical to phytochrome A specific signal transduction component PAT3 [Arabidopsis thaliana] gi|19421998|gb|AAL87850; identical to far-red elongated hypocotyl protein 1 [Arabidopsis thaliana] gi|17148773|gb|AAL35819 9 2 10 20 At2g37840 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 10 21 At2g37890 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 9 2 10 22 At2g38040 acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit family contains Pfam profile: PF03255: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 9 2 10 23 At2g38100 proton-dependent oligopeptide transport (POT) family protein low similarity to SP|P46032 Peptide transporter PTR2-B (Histidine transporting protein) {Arabidopsis thaliana}; contains Pfam profile PF00854: POT family 9 2 10 24 At2g40640 expressed protein 9 2 10 25 At2g40700 "DEAD/DEAH box helicase, putative (RH17) identical to GB:CAA09207, contains a DEAD/DEAH box family ATP-dependent helicas signature; identical to cDNA DEAD box RNA helicase, RH17 GI:3776008" 9 2 11 1 At2g40840 "glycoside hydrolase family 77 protein contains Pfam profiles PF02446: 4-alpha-glucanotransferase, PF00686: Starch binding domain; contains a non-consensus AT-AC intron between at intron 5" 9 2 11 2 At2g40910 "F-box protein-related similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 9 2 11 3 At2g41020 WW domain-containing protein contains Pfam domain PF00397: WW domain 9 2 11 4 At2g41080 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 2 11 5 At2g41240 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 2 11 6 At2g41290 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088 9 2 11 7 At2g43900 "endonuclease/exonuclease/phosphatase family protein belongs to Pfam:PF03372: Endonuclease/Exonuclease/phosphatase family; contains 3 WD-40 repeats (PF00400);similar to Type II inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56 (5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]" 9 2 11 8 At2g43950 expressed protein 9 2 11 9 At2g44060 late embryogenesis abundant family protein / LEA family protein similar to ethylene-responsive late embryogenesis-like protein [Lycopersicon esculentum] GI:1684830; contains Pfam profile PF03168: Late embryogenesis abundant protein 9 2 11 10 At2g44100 Rab GDP dissociation inhibitor (GDI1) identical to GDP dissociation inhibitor [Arabidopsis thaliana] GI:1655424 9 2 11 11 At2g44260 expressed protein 9 2 11 12 At2g44310 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 9 2 11 13 At2g44500 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'axi 1 protein from Nicotiana tabacum -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 9 2 11 14 At2g44530 "ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative very strong similarity to phosphoribosyl pyrophosphate synthase [Spinacia oleracea] GI:4902849; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 9 2 11 15 At2g47200 expressed protein 9 2 11 16 At2g47260 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 9 2 11 17 At2g47430 cytokinin-responsive histidine kinase (CKI1) identical to GB:D87545 9 2 11 18 At2g47470 thioredoxin family protein similar to protein disulfide isomerase [Dictyostelium discoideum] GI:2627440; contains Pfam profile: PF00085 Thioredoxin 9 2 11 19 At2g47640 "small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative similar to small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2) [Mus musculus] SWISS-PROT:P43330" 9 2 11 20 At2g47680 "zinc finger (CCCH type) helicase family protein similar to SP|Q28141 ATP-dependent RNA helicase A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos taurus}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 9 2 11 21 At2g47850 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 9 2 11 22 At2g47890 zinc finger (B-box type) family protein 9 2 11 23 At3g03210 expressed protein 9 2 11 24 At3g03270 universal stress protein (USP) family protein / early nodulin ENOD18 family protein contains Pfam profile PF00582: universal stress protein family; similar to early nodulin ENOD18 (GI:11602747) [Vicia faba] 9 2 11 25 At3g03420 "Ku70-binding family protein similar to Ku70-binding protein GB:AAD31085 GI:4867999 [Homo sapiens]; contains Prosite PS00142: Neutral zinc metallopeptidases, zinc-binding region signature" 9 2 12 1 At3g03480 transferase family protein similar to hypersensitivity-related gene GB:CAA64636 [Nicotiana tabacum]; contains Pfam transferase family domain PF00248 9 2 12 2 At3g03660 homeobox-leucine zipper transcription factor family protein similar to to PRESSED FLOWER (GP:17907768) {Arabidopsis thaliana} 9 2 12 3 At3g03720 amino acid permease family protein similar to cationic amino acid transporter-1 [Rattus norvegicus] GI:1589917; contains Pfam profile PF00324: Amino acid permease 9 2 12 4 At3g03860 expressed protein 9 2 12 5 At3g03900 "adenylylsulfate kinase, putative similar to adenylylsulfate kinase 1, chloroplast precursor (APS kinase, Adenosine-5'phosphosulfate kinase, ATP adenosine-5'- phosphosulfate 3'-phosphotransferase) [Arabidopsis thaliana] SWISS-PROT:Q43295" 9 2 12 6 At3g06430 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 12 7 At3g06470 GNS1/SUR4 membrane family protein similar to SP|P39540 Elongation of fatty acids protein 1 {Saccharomyces cerevisiae}; contains Pfam profile PF01151: GNS1/SUR4 family 9 2 12 8 At3g06600 expressed protein ; expression supported by MPSS 9 2 12 9 At3g66652 fip1 motif-containing protein contains Pfam profile PF05182: Fip1 motif 9 2 12 10 At3g06750 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 2 12 11 At3g06820 mov34 family protein similar to SP|P46736 C6.1A protein {Homo sapiens}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 9 2 12 12 At3g06980 "DEAD/DEAH box helicase, putative contains Pfam profile: PF00270 DEAD/DEAH box helicase" 9 2 12 13 At3g07020 UDP-glucose:sterol glucosyltransferase (UGT80A2) identical to UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] GI:2462931; contains Pfam profile: PF03033 glycosyltransferase family 28 N-terminal domain 9 2 12 14 At3g10070 transcription initiation factor IID (TFIID) subunit A family protein similar to hypothetical protein GB:CAB10099 [Schizosaccharomyces pombe]; contains Pfam profile PF03847: Transcription initiation factor TFIID subunit A 9 2 12 15 At3g10116 hypothetical protein 9 2 12 16 At3g10270 "DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative similar to SP|O50627 DNA gyrase subunit B (EC 5.99.1.3) {Bacillus halodurans}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00204: DNA topoisomerase II (N-terminal region), PF00986: DNA gyrase, B subunit, carboxyl terminus, PF01751: Toprim domain" 9 2 12 17 At3g10310 kinesin motor protein-related similar to carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis] 9 2 12 18 At3g10470 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 2 12 19 At3g10500 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 9 2 12 20 At3g10640 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 9 2 12 21 At3g10680 heat shock protein-related contains weak similarity to Pfam profile PF00011: Hsp20/alpha crystallin family 9 2 12 22 At3g13110 serine O-acetyltransferase (SAT-1) identical to serine acetyltransferase (Sat-1) GI:1184048 [Arabidopsis thaliana] 9 2 12 23 At3g13170 DNA topoisomerase VIA (SPO11-1) identical to AtSPO11-1 [Arabidopsis thaliana] GI:13383478; contains Pfam profile PF04406: Type IIB DNA topoisomerase; identical to cDNA putative topoisomerase VIA (SPO11 gene 1) GI:7270974 9 2 12 24 At3g13250 "hypothetical protein low similarity to SP|P07271 DNA repair and recombination protein PIF1, mitochondrial precursor {Saccharomyces cerevisiae}" 9 2 12 25 At3g13300 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens] and autoantigen locus HSU17474 (GI:596134) [Homo sapiens] 9 2 13 1 At3g13460 expressed protein contains Pfam profile PF04146: YT521-B-like family 9 2 13 2 At3g13520 arabinogalactan-protein (AGP12) identical to gi|10880501|gb|AAG24280 9 2 13 3 At3g13670 "protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain" 9 2 13 4 At3g13680 F-box family protein contains F-box domain Pfam:PF00646 9 2 13 5 At3g16150 "L-asparaginase, putative / L-asparagine amidohydrolase, putative similar to Swiss-Prot:P30364 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) [Lupinus angustifolius]" 9 2 13 6 At3g16200 expressed protein 9 2 13 7 At3g16380 "polyadenylate-binding protein, putative / PABP, putative similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP|P42731, [Cucumis sativus] GI:7528270, {Homo sapiens} SP|Q13310, {Arabidopsis thaliana} SP|Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 9 2 13 8 At3g16450 jacalin lectin family protein similar to SP|Q9SAV1 Myrosinase binding protein-like At1g52030 {Arabidopsis thaliana}; contains Pfam profile: PF01419 jacalin-like lectin domain 9 2 13 9 At3g16570 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 9 2 13 10 At3g16630 kinesin motor family protein similar to mitotic centromere-associated kinesin GB:AAC27660 from [Homo sapiens]; contains Pfam profile PF00225: Kinesin motor domain 9 2 13 11 At3g16785 "phospholipase D zeta1 / PLDzeta1 (PLDP1) identical to phospholipase D zeta1 [Arabidopsis thaliana] GI:15723315, SP|Q9LRZ5 Phospholipase D p1 (EC 3.1.4.4) (AtPLDp1) (Phospholipase D1 PHOX and PX containing domain) (Phospholipase D zeta 1) (PLDzeta1) {Arabidopsis thaliana}; supported by cDNA gi:15723314; non-consensus splice site (GC) at the beginning of first intron." 9 2 13 12 At3g16850 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P05117 Polygalacturonase 2A precursor (EC 3.2.1.15) (Pectinase) {Lycopersicon esculentum}; contains PF00295: Glycosyl hydrolases family 28 9 2 13 13 At3g19480 "D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative similar to SP:O04130 from [Arabidopsis thaliana]" 9 2 13 14 At3g19520 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 9 2 13 15 At3g19670 "FF domain-containing protein / WW domain-containing protein weak similarity to huntingtin-interacting protein HYPA/FBP11 [Homo sapiens] GI:3341980; contains Pfam profiles PF01846: FF domain, PF00397: WW domain" 9 2 13 16 At3g19720 dynamin family protein identical to cDNA dynamin-like protein (ARC5) GI: 30349145; contains Pfam profile PF00350: Dynamin family 9 2 13 17 At3g19900 expressed protein 9 2 13 18 At3g19960 "myosin (ATM) nearly identical to myosin [Arabidopsis thaliana] GI:6491702; similar to myosin GI:6491702 from [Arabidopsis thaliana] ;contains Pfam profiles: PF00063: myosin head (motor domain), PF00612: IQ calmodulin-binding motif; identical to cDNA myosin (ATM) GI:297068" 9 2 13 19 At3g20100 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]; contains Pfam profile: PF00067 cytochrome P450; supported by full-length cDNA: Ceres:149380. 9 2 13 20 At3g20155 hypothetical protein 9 2 13 21 At3g22870 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 9 2 13 22 At3g22930 "calmodulin, putative strong similarity to calmodulin 8 GI:5825600 from [Arabidopsis thaliana]; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 9 2 13 23 At3g23080 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 9 2 13 24 At3g23140 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 9 2 13 25 At3g23280 "zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) and Pfam profile: PF00023 ankyrin repeat" 9 2 14 1 At3g23325 "splicing factor, putative similar to Splicing factor 3B subunit 10 (SF3b10) (Pre-mRNA splicing factor SF3b 10 kDa subunit) (Swiss-Prot:Q9BWJ5) [Homo sapiens]" 9 2 14 2 At3g23530 "cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profiles PF02353: Cyclopropane-fatty-acyl-phospholipid synthase, PF01593: amine oxidase, flavin-containing" 9 2 14 3 At3g23590 expressed protein 9 2 14 4 At3g26430 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 9 2 14 5 At3g26470 expressed protein 9 2 14 6 At3g26618 "eukaryotic release factor 1 family protein / eRF1 family protein contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 9 2 14 7 At3g26670 expressed protein 9 2 14 8 At3g26780 "phosphoglycerate/bisphosphoglycerate mutase family protein similar to X4 protein GI:21386798, Y4 protein GI:21386800 from [Silene dioica]; contains Pfam profiles PF00300: phosphoglycerate mutase family, PF01535: PPR repeat" 9 2 14 9 At3g26840 esterase/lipase/thioesterase family protein contains Pfam profile PF03096: Ndr family 9 2 14 10 At3g26960 expressed protein 9 2 14 11 At3g27025 expressed protein 9 2 14 12 At3g29800 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 9 2 14 13 At3g30180 "cytochrome P450, putative similar to cytochrome P450 homolog (SP:U54770) [Lycopersicon esculentum]" 9 2 14 14 At3g30380 expressed protein ; expression supported by MPSS 9 2 14 15 At3g30460 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 2 14 16 At3g30660 hypothetical protein 9 2 14 17 At3g30725 expressed protein ; expression supported by MPSS 9 2 14 18 At3g31310 hypothetical protein 9 2 14 19 At3g31406 hypothetical protein 9 2 14 20 At3g44700 expressed protein contains Pfam profile PF03140: Plant protein of unknown function; expression supported by MPSS 9 2 14 21 At3g44735 phytosulfokines-related contains similarities to phytosulfokines from [Arabidopsis thaliana] 9 2 14 22 At3g44880 Rieske [2Fe-2S] domain-containing protein similar to lethal leaf-spot 1 from Zea mays [gi:1935909]; contains Pfam PF00355 Rieske [2Fe-2S] domain 9 2 14 23 At3g44935 hypothetical protein 9 2 14 24 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 9 2 14 25 At3g45140 lipoxygenase (LOX2) identical to SP|P38418 9 2 15 1 At3g45350 "hypothetical protein similar to At4g09400, At2g14330" 9 2 15 2 At3g45410 "lectin protein kinase family protein contains Pfam profiles: PF00069 protein kinase domain, PF00138 legume lectins alpha domain, PF00139 legume lectins beta domain" 9 2 15 3 At3g48220 hypothetical protein 9 2 15 4 At3g48280 "cytochrome P450, putative nearly identical to cytochrome P450 71A25 (SP:Q9STK8) [Arabidopsis thaliana];" 9 2 15 5 At3g48450 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 9 2 15 6 At3g48510 expressed protein 9 2 15 7 At3g48690 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 9 2 15 8 At3g48750 cell division control protein 2 homolog A (CDC2A) identical to cell division control protein 2 homolog A [Arabidopsis thaliana] SWISS-PROT:P24100 9 2 15 9 At3g48910 expressed protein 9 2 15 10 At3g48970 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam heavy-metal-associated domain PF00403 9 2 15 11 At3g51820 "chlorophyll synthetase, putative identical to gi:972938 putative chlorophyll synthetase from Arabidopsis thaliana" 9 2 15 12 At3g51880 high mobility group protein alpha (HMGalpha) / HMG protein alpha nearly identical to HMG protein (HMGalpha) [Arabidopsis thaliana] GI:2832357; contains Pfam profile PF00505: HMG (high mobility group) box 9 2 15 13 At3g52020 serine carboxypeptidase S10 family protein similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase 9 2 15 14 At3g52060 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 9 2 15 15 At3g52190 "transducin family protein / WD-40 repeat family protein similar to St12p protein (GI:166878) {Arabidopsis thaliana}; contains Pfam profile: PF00400 WD domain, G-beta repeat" 9 2 15 16 At3g52250 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 2 15 17 At3g52400 "syntaxin, putative (SYP122) similar to SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 9 2 15 18 At3g52460 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 2 15 19 At3g54980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 15 20 At3g55020 RabGAP/TBC domain-containing protein low similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa (EPI64 protein) {Homo sapiens}; contains Pfam profile PF00566: TBC domain 9 2 15 21 At3g55180 "esterase/lipase/thioesterase family protein low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 9 2 15 22 At3g55240 expressed protein 9 2 15 23 At3g55420 expressed protein 9 2 15 24 At3g55480 "adaptin family protein similar to AP-3 complex beta3A subunit, Homo sapiens, SP|O00203; contains Pfam profile: PF01602 Adaptin N terminal region" 9 2 15 25 At3g55660 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 9 2 16 1 At3g55720 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 9 2 16 2 At3g58570 "DEAD box RNA helicase, putative similar to SP|O00571 DEAD-box protein 3 (Helicase-like protein 2) {Homo sapiens}, DEAD box RNA helicase DDX3 [Homo sapiens] GI:3523150; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 9 2 16 3 At3g58630 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 9 2 16 4 At3g58800 "expressed protein proline-rich protein A41R, Chlorella virus PBCV-1, PIR:T17531" 9 2 16 5 At3g58860 F-box family protein contains F-box domain Pfam:PF00646 9 2 16 6 At3g59040 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 16 7 At3g59090 expressed protein 9 2 16 8 At3g59250 F-box family protein contains F-box domain Pfam:PF00646 9 2 16 9 At3g59310 expressed protein identical to anthocyanin-related membrane protein 1 [Arabidopsis thaliana] GI:16416383; supporting cDNA gi|16416382|dbj|AB060644.1| 9 2 16 10 At3g61960 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 9 2 16 11 At3g62020 germin-like protein (GLP10) identical to germin-like protein subfamily 2 member 4 [SP|Q9M263] 9 2 16 12 At3g62180 invertase/pectin methylesterase inhibitor family protein low similarity to pollen-specific pectin esterase from Brassica rapa subsp. pekinensis GI:1620652; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 9 2 16 13 At3g62240 "zinc finger (C2H2 type) family protein contains Pfam PF00096: Zinc finger, C2H2 type" 9 2 16 14 At3g62400 "expressed protein cytochrome c oxidase subunit 5c - Oryza sativa, EMBL:AB027123" 9 2 16 15 At3g62460 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 9 2 16 16 At3g62650 "expressed protein putative mitochondrial carrier protein At2g47490 - Arabidopsis thaliana, EMBL:AC002535" 9 2 16 17 At3g62690 zinc finger (C3HC4-type RING finger) family protein (ATL5) identical to RING-H2 zinc finger protein ATL5 [Arabidopsis thaliana] gi|4928401|gb|AAD33583 9 2 16 18 At4g01575 "serine protease inhibitor, Kazal-type family protein contains Pfam domain PF00050: Kazal-type serine protease inhibitor domain" 9 2 16 19 At4g01610 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase GI:609175 from [Nicotiana rustica]; contains an unusually short, 5nt exon" 9 2 16 20 At4g01760 "DC1 domain-containing protein similar to T15B16.10 similar to A. thaliana CHP-rich proteins encoded by T10M13, GenBank accession number AF001308" 9 2 16 21 At4g01820 "multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]" 9 2 16 22 At4g01940 "nitrogen fixation NifU-like family protein similar to apricot NifU homolog partial CDS, GenBank accession number U95179; contains Pfam profile: PF01106 NifU-like domain" 9 2 16 23 At4g01990 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 9 2 16 24 At4g02140 expressed protein 9 2 16 25 At4g02195 syntaxin 42 (SYP42) / TLG2b identical to SP|Q9SWH4 Syntaxin 42 (AtSYP42) (AtTLG2b) {Arabidopsis thaliana} 9 2 17 1 At4g05130 "equilibrative nucleoside transporter, putative (ENT4) identical to putative equilibrative nucleoside transporter ENT4 [Arabidopsis thaliana] GI:16518995; contains similarity to SWISS-PROT:P31381 nucleoside transporter FUN26 [Saccharomyces cerevisiae]; contains Pfam profile PF01733: Nucleoside transporter" 9 2 17 2 At4g05170 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 2 17 3 At4g05340 hypothetical protein 9 2 17 4 At4g05400 expressed protein 9 2 17 5 At4g05581 hypothetical protein 9 2 17 6 At4g05632 hypothetical protein 9 2 17 7 At4g06744 leucine-rich repeat family protein / extensin family protein similar to leucine-rich repeat/extensin 1 (GI:13809918) {Arabidopsis thaliana}; contains Pfam PF00560: Leucine Rich Repeat domains 9 2 17 8 At4g07380 hypothetical protein 9 2 17 9 At4g10530 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 9 2 17 10 At4g10590 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 9 2 17 11 At4g10760 "methyltransferase MT-A70, putative similar to (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948, m6A methyltransferase (MT-A70) [Homo sapiens] GI:2460037; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase))" 9 2 17 12 At4g10820 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 9 2 17 13 At4g10950 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 9 2 17 14 At4g11000 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 2 17 15 At4g11160 "translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}" 9 2 17 16 At4g11210 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 9 2 17 17 At4g13950 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 9 2 17 18 At4g13990 exostosin family protein contains Pfam profile: PF03016 exostosin family 9 2 17 19 At4g14145 expressed protein 9 2 17 20 At4g14170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 17 21 At4g14310 peroxisomal membrane protein-related contains weak similarity to Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) (Swiss-Prot:P42925) [Mus musculus] 9 2 17 22 At4g14350 protein kinase family protein contains similarity to Swiss-Prot:O13310 serine/threonine-protein kinase orb6 [Schizosaccharomyces pombe] 9 2 17 23 At4g14465 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 9 2 17 24 At4g14520 DNA-directed RNA polymerase II-related contains similarity to Swiss-Prot:P38421 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) [Arabidopsis thaliana] 9 2 17 25 At4g16880 disease resistance protein-related contains weak similarity to disease resistance protein RPP4 [Arabidopsis thaliana] gi|20270890|gb|AAM18462 9 2 18 1 At4g16950 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein.; closest homolog in Col-0 to RPP5 of clutivar Landsberg erecta." 9 2 18 2 At4g17080 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related low similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 9 2 18 3 At4g17150 expressed protein 9 2 18 4 At4g17300 "asparaginyl-tRNA synthetase, chloroplast, mitochondrial / asparagine-tRNA ligase / AsnRS (SYNO) nearly identical to SP|O48593" 9 2 18 5 At4g17370 "oxidoreductase family protein weak similarity to SP|P26935 Myo-inositol 2-dehydrogenase (EC 1.1.1.18). {Bacillus subtilis}; contains Pfam profiles PF01408: Oxidoreductase family NAD-binding Rossmann fold, PF02894: Oxidoreductase family C-terminal alpha/beta domain" 9 2 18 6 At4g17540 expressed protein 9 2 18 7 At4g17585 hypothetical protein 9 2 18 8 At4g20150 expressed protein 9 2 18 9 At4g20220 hypothetical protein 9 2 18 10 At4g20380 zinc finger protein (LSD1) identical to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660 9 2 18 11 At4g20440 "small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|Q05856 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Drosophila melanogaster}" 9 2 18 12 At4g20720 dentin sialophosphoprotein-related contains weak similarity to dentin sialophosphoprotein precursor (Swiss-Prot:Q9NZW4) [Homo sapiens] 9 2 18 13 At4g20790 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560;" 9 2 18 14 At4g20970 basic helix-loop-helix (bHLH) family protein 9 2 18 15 At4g21030 "Dof-type zinc finger domain-containing protein prolamin box binding factor, Zea mays, PID:g2393775" 9 2 18 16 At4g23600 "coronatine-responsive tyrosine aminotransferase / tyrosine transaminase similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II; identical to cDNA coronatine-regulated tyrosine aminotransferase (F9D16.70) GI:15076852" 9 2 18 17 At4g23660 "UbiA prenyltransferase family protein similar to para-hydroxybenzoate--polyprenyltransferase, mitochondrial [Precursor] [Saccharomyces cerevisiae], SP|P32378; contains PF01040 UbiA prenyltransferase family domain" 9 2 18 18 At4g23820 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase PG1 [Glycine max] GI:5669846; contains PF00295: Glycosyl hydrolases family 28 9 2 18 19 At4g23882 heavy-metal-associated domain-containing protein 9 2 18 20 At4g24015 zinc finger (RING-H2 type) protein-related low similarity to RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana] GI:4928399 9 2 18 21 At4g24070 hypothetical protein 9 2 18 22 At4g24230 "acyl-CoA binding protein, putative / ACBP, putative contains similarity to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057" 9 2 18 23 At4g24270 RNA recognition motif (RRM)-containing protein low similarity to tumor-rejection antigen SART3 [Mus musculus] GI:7637845; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 9 2 18 24 At4g26830 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 9 2 18 25 At4g26890 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 19 1 At4g27030 expressed protein 9 2 19 2 At4g27090 "60S ribosomal protein L14 (RPL14B) ribosomal protein L14 - Human,PIR3:JC5954" 9 2 19 3 At4g27270 "quinone reductase family protein similar to 1,4-benzoquinone reductase [Phanerochaete chrysosporium][GI:4454993]; similar to Trp repressor binding protein [Escherichia coli][SP|P30849]; contains flavodoxin domain PF00258" 9 2 19 4 At4g27330 sporocyteless (SPL) identical to sporocyteless SPL (MADS-box related protein) [Arabidopsis thaliana] gi|5566240|gb|AAD45344 9 2 19 5 At4g27490 "3' exoribonuclease family domain 1-containing protein contains Pfam PF01138: 3' exoribonuclease family, domain 1" 9 2 19 6 At4g27550 "alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 9 2 19 7 At4g30120 ATPase E1-E2 type family protein / heavy-metal-associated domain-containing protein similar to cadmium efflux ATPase [Streptococcus thermophilus] GI:22416341; contains Pfam profile PF00122: E1-E2 ATPase 9 2 19 8 At4g30180 expressed protein 9 2 19 9 At4g30320 allergen V5/Tpx-1-related family protein similar to SP|Q40374 Pathogenesis-related protein PR-1 precursor {Medicago truncatula}; contains Pfam profile PF00188: SCP-like extracellular protein 9 2 19 10 At4g30380 "expansin-related similar to blight-associated protein p12 precursor [Citrus jambhiri] gi|4102727|gb|AAD03398; similar to beta-expansin [Oryza sativa] gi|8118428|gb|AAF72986; expansin-related gene, PMID:11641069, www.bio.psu.edu/expansins" 9 2 19 11 At4g30510 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); similar to several hypothetical proteins 9 2 19 12 At4g30570 "GDP-mannose pyrophosphorylase, putative similar to GDP-mannose pyrophosphorylase [Arabidopsis thaliana] GI:3598958; contains Pfam profile PF00483: Nucleotidyl transferase" 9 2 19 13 At4g30740 "expressed protein hypothetical protein T29E15.27 - Arabidopsis thaliana,PID:g3738334" 9 2 19 14 At4g30780 "expressed protein hypothetical protein F27D4.1 - Arabidopsis thaliana,PID:g4115371" 9 2 19 15 At4g33270 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); WD-repeat protein -Daucus carota,PID:g2253631" 9 2 19 16 At4g33330 "glycogenin glucosyltransferase (glycogenin)-related similar to glycogenin glucosyltransferase (glycogenin-1) (EC 2.4.1.186) from Homo sapiens [SP|P46976], Mus musculus [SP|Q9R062], Oryctolagus cuniculus [GI:165513]; contains Pfam profile PF01501: Glycosyl transferase family 8" 9 2 19 17 At4g33500 "protein phosphatase 2C-related / PP2C-related YHR077c (NMD2,IFS1) protein -Saccharomyces cerevisiae,PID:g555939" 9 2 19 18 At4g33540 metallo-beta-lactamase family protein 9 2 19 19 At4g33690 expressed protein 9 2 19 20 At4g33750 expressed protein 9 2 19 21 At4g33905 "peroxisomal membrane protein 22 kDa, putative similar to 22 kDa peroxisomal membrane protein PMP22 [Mus musculus] gi|10954089|gb|AAG25724" 9 2 19 22 At4g33945 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 9 2 19 23 AT5G57480 PC-1 B04 9 2 19 24 3XSSC PC-1 B16 9 2 19 25 AT1G29930 PC-1 F04 9 2 20 1 3XSSC PC-1 F16 9 2 20 2 AT3G44150 PC-1 J04 9 2 20 3 3XSSC PC-1 J16 9 2 20 4 AT4G00810 PC-1 N04 9 2 20 5 3XSSC PC-1 N16 9 2 20 6 At4g36520 trichohyalin-related low similarity to SP|Q07283 Trichohyalin {Homo sapiens} 9 2 20 7 At4g36540 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 9 2 20 8 At4g36690 "U2 snRNP auxiliary factor large subunit, putative similar to U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] GI:3850823" 9 2 20 9 At4g36740 homeobox-leucine zipper family protein similar to CRHB7 (GP:3868841) {Ceratopteris richardii} and to homeotic protein VAHOX1 (PIR:T07734) [Lycopersicon esculentum] 9 2 20 10 At4g36890 "glycosyl transferase family 43 protein low similarity to Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, Homo sapiens [SP|Q9P2W7], Rattus norvegicus [SP|O35789]; contains Pfam domain Glycosyltransferase family 43 [PF03360]" 9 2 20 11 At4g36940 nicotinate phosphoribosyltransferase family protein / NAPRTase family protein contains Pfam domain PF04095: Nicotinate phosphoribosyltransferase (NAPRTase) 9 2 20 12 At4g37130 hydroxyproline-rich glycoprotein family protein 9 2 20 13 At4g37180 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 9 2 20 14 At4g39780 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.4,Arabidopsis thaliana" 9 2 20 15 At4g39830 "L-ascorbate oxidase, putative similar to SP|P14133 L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) {Cucumis sativus}; contains Pfam profile PF00394: Multicopper oxidase" 9 2 20 16 At4g39980 2-dehydro-3-deoxyphosphoheptonate aldolase 1 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 / DAHP synthetase 1 (DHS1) nearly identical to SP|P29965 9 2 20 17 At4g40040 "histone H3.2 identical to Histone H3.2, minor Lolium temulentum SP|P11105, nearly identical to histone H3.2 Mus pahari GI:515005; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 9 2 20 18 At5g01070 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 2 20 19 At5g01120 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 9 2 20 20 At5g01260 glycoside hydrolase starch-binding domain-containing protein low similarity to SP|P31797 Cyclomaltodextrin glucanotransferase precursor (EC 2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase) {Bacillus stearothermophilus}; contains Pfam profile PF00686: Starch binding domain 9 2 20 21 At5g01310 "basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain, weak hit to PF01661: Appr-1-p processing enzyme family" 9 2 20 22 At5g04020 calmodulin-binding protein-related (PICBP) contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from [Solanum tuberosum] 9 2 20 23 At5g04070 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 9 2 20 24 At5g04240 "zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein contains Pfam domians PF02375: jmjN domain, PF02373: jmjC domain and PF00096: Zinc finger, C2H2 type" 9 2 20 25 At5g04310 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 9 2 21 1 At5g04480 expressed protein 9 2 21 2 At5g04540 expressed protein 9 2 21 3 At5g04730 expressed protein ; expression supported by MPSS 9 2 21 4 At5g04790 hypothetical protein 9 2 21 5 At5g07310 "AP2 domain-containing transcription factor, putative AP2 domain containing proteins/transcription factors" 9 2 21 6 At5g07370 "inositol polyphosphate 6-/3-/5-kinase 2a (IPK2a) contains Pfam domain, PF03770: Inositol polyphosphate kinase" 9 2 21 7 At5g07530 glycine-rich protein (GRP17) olesin; glycine-rich protein 17 (GRP17) PMID:11431566; function: pollen recognition (PMID:10655594) 9 2 21 8 At5g07590 WD-40 repeat protein family contains 3 WD-40 repeats (PF00400); similarity to WD-repeat protein 8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS] 9 2 21 9 At5g07780 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 9 2 21 10 At5g07840 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 2 21 11 At5g08020 "replication protein, putative similar to replication protein A1 [Oryza sativa] GI:2258469; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain" 9 2 21 12 At5g08080 "syntaxin, putative (SYP132) similar to SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 9 2 21 13 At5g11100 C2 domain-containing protein similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 9 2 21 14 At5g11160 "adenine phosphoribosyltransferase, putative strong similarity to SP|Q42563 Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 9 2 21 15 At5g11320 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana" 9 2 21 16 At5g11370 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 9 2 21 17 At5g11550 expressed protein 9 2 21 18 At5g11610 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 9 2 21 19 At5g11770 "NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial identical to NADH-ubiquinone oxidoreductase 20 kDa subunit mitochondrial [precursor] SP:Q42577 from [Arabidopsis thaliana]; contains Pfam profile: PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit" 9 2 21 20 At5g11830 hypothetical protein 9 2 21 21 At5g14970 expressed protein 9 2 21 22 At5g15030 paired amphipathic helix repeat-containing protein low similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 9 2 21 23 At5g15190 expressed protein 9 2 21 24 At5g15250 "FtsH protease, putative similar to FtsH-like protein Pftf precursor GI:4325041 from [Nicotiana tabacum]" 9 2 21 25 At5g15430 calmodulin-binding protein-related has weak similarity to calmodulin-binding proteins 9 2 22 1 At5g15470 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 9 2 22 2 At5g15620 F-box family protein contains F-box domain Pfam:PF00646 9 2 22 3 At5g15680 expressed protein 9 2 22 4 At5g18320 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 9 2 22 5 At5g18380 40S ribosomal protein S16 (RPS16C) 9 2 22 6 At5g18520 expressed protein 9 2 22 7 At5g18570 GTP1/OBG family protein similar to SP|P20964 Spo0B-associated GTP-binding protein {Bacillus subtilis}; contains Pfam profile PF01018: GTP1/OBG family 9 2 22 8 At5g18700 "protein kinase-related contains protein kinase domain, INTERPRO:IPR000719" 9 2 22 9 At5g18760 "zinc finger (C3HC4-type RING finger) family protein predicted proteins, Arabidopsis thaliana ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 9 2 22 10 At5g18910 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 22 11 At5g18950 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 2 22 12 At5g22280 expressed protein 9 2 22 13 At5g22340 expressed protein 9 2 22 14 At5g22510 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 9 2 22 15 At5g22550 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 9 2 22 16 At5g22700 F-box family protein contains F-box domain Pfam:PF00646 9 2 22 17 At5g22760 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 9 2 22 18 At5g22910 "cation/hydrogen exchanger, putative (CHX9) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 9 2 22 19 At5g22970 expressed protein 9 2 22 20 At5g25570 expressed protein 9 2 22 21 At5g25610 dehydration-responsive protein (RD22) identical to SP|Q08298 Dehydration-responsive protein RD22 precursor {Arabidopsis thaliana} 9 2 22 22 At5g25850 F-box family protein contains F-box domain Pfam:PF00646 9 2 22 23 At5g25910 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596;" 9 2 22 24 At5g26060 S1 self-incompatibility protein-related contains weak similarity to S1 self-incompatibility protein (GI:452430) [Papaver rhoeas] 9 2 22 25 At5g26120 glycosyl hydrolase family protein 51 similar to arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II from GI:13398414 [Hordeum vulgare] 9 2 23 1 At5g26280 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 2 23 2 At5g26340 "hexose transporter, putative strong similarity to hexose transporter, Lycopersicon esculentum, GI:5734440; contains Pfam profile PF00083: major facilitator superfamily protein" 9 2 23 3 At5g32450 "RNA recognition motif (RRM)-containing protein various predicted proteins, Arabidopsis thaliana and others" 9 2 23 4 At5g32610 "hypothetical protein predicted proteins, Arabidopsis thaliana and Borrelia burgdorferi" 9 2 23 5 At5g33360 hypothetical protein 9 2 23 6 At5g33410 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 9 2 23 7 At5g34881 expressed protein 9 2 23 8 At5g34905 expressed protein 9 2 23 9 At5g35120 hypothetical protein 9 2 23 10 At5g35210 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease 9 2 23 11 At5g38360 esterase/lipase/thioesterase family protein low similarity to SP|P49323 Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride peroxidase) {Streptomyces lividans}; contains Interpro entry IPR000379 9 2 23 12 At5g38396 F-box family protein contains F-box domain Pfam:PF00646 9 2 23 13 At5g38565 F-box family protein contains F-box domain Pfam:PF00646 9 2 23 14 At5g38610 invertase/pectin methylesterase inhibitor family protein low similarity to pistil-specific gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 9 2 23 15 At5g38790 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 9 2 23 16 At5g38850 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 2 23 17 At5g39010 hypothetical protein 9 2 23 18 At5g39090 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 9 2 23 19 At5g41920 scarecrow transcription factor family protein 9 2 23 20 At5g41990 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 23 21 At5g42130 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 9 2 23 22 At5g42190 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At2) / UFO-binding protein (UIP2) E3 ubiquitin ligase; skp1b; identical to UIP2 GI:3719211 from [Arabidopsis thaliana]; contains Pfam profiles PF01466: Skp1 family, dimerisation domain and PF03931:Skp1 family, tetramerisation domain; identical to cDNA UFO binding protein UIP2 mRNA, partial cds GI:3719210" 9 2 23 23 At5g42350 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 9 2 23 24 At5g42410 auxin-responsive family protein similar to auxin-induced protein SAUR (GI:3043536) [Raphanus sativus] 9 2 23 25 At5g42600 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase [gi:6650207] [PMID: 11247608]" 9 2 24 1 At5g42650 "allene oxide synthase (AOS) / hydroperoxide dehydrase / cytochrome P450 74A (CYP74A) identical to Allene oxide synthase, chloroplast precursor (Hydroperoxide dehydrase) (Cytochrome P450 74A) (SP:Q96242) {Arabidopsis thaliana}" 9 2 24 2 At5g45210 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 2 24 3 At5g45270 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 9 2 24 4 At5g45380 sodium:solute symporter family protein contains Pfam profile: PF00474 sodium:solute symporter family 9 2 24 5 At5g45440 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 9 2 24 6 At5g45600 YEATS family protein contains Pfam domain PF03366: YEATS family 9 2 24 7 At5g45640 "subtilase family protein contains Pfam domain, PF00082: Subtilase family; contains Pfam domain, PF02225: protease associated (PA) domain" 9 2 24 8 At5g45780 "leucine-rich repeat transmembrane protein kinase, putative " 9 2 24 9 At5g45840 "leucine-rich repeat transmembrane protein kinase, putative and genscan+" 9 2 24 10 At5g48440 FAD-dependent oxidoreductase family protein low similarity to hydrogen cyanide synthase HcnC from Pseudomonas fluorescens [GI:3220203]; contains Pfam profile PF01266 FAD dependent oxidoreductase 9 2 24 11 At5g48485 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 9 2 24 12 At5g48640 "cyclin family protein similar to SP|P55168 Cyclin C {Gallus gallus}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 9 2 24 13 At5g48657 defense protein-related weak similarity to SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis thaliana} 9 2 24 14 At5g48830 expressed protein 9 2 24 15 At5g48890 hypothetical protein 9 2 24 16 At5g49040 disease resistance-responsive protein-related / dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 9 2 24 17 At5g49100 expressed protein 9 2 24 18 At5g51820 "phosphoglucomutase, chloroplast (PGM) (PGMP) / glucose phosphomutase identical to SP|Q9SCY0 Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) {Arabidopsis thaliana}" 9 2 24 19 At5g51870 MADS-box protein (AGL71) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 9 2 24 20 At5g52030 TraB protein-related 9 2 24 21 At5g52080 expressed protein similar to unknown protein (gb|AAC73044.1) 9 2 24 22 At5g52250 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to photomorphogenesis repressor PnCOP1 (GI:11127996) [Ipomoea nil] 9 2 24 23 At5g52310 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) 9 2 24 24 At5g52490 "fibrillarin, putative similar to fibrillarin from {Xenopus laevis} SP|P22232, {Mus musculus} SP|P35550, {Homo sapiens} SP|P22087" 9 2 24 25 At5g52545 expressed protein 9 2 25 1 At5g55190 Ras-related GTP-binding protein (RAN3) identical to atran3 [Arabidopsis thaliana] GI:2058280 9 2 25 2 At5g55250 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:jasmonic acid carboxyl methyltransferase (JMT)[GI:13676829] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 9 2 25 3 At5g55430 hypothetical protein 9 2 25 4 At5g55490 expressed protein 9 2 25 5 At5g55630 "outward rectifying potassium channel (KCO1) identical to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158 of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 9 2 25 6 At5g55680 glycine-rich protein 9 2 25 7 At5g55855 hypothetical protein 9 2 25 8 At5g55910 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 9 2 25 9 At5g58530 glutaredoxin family protein 9 2 25 10 At5g58570 expressed protein 9 2 25 11 At5g58720 "PRLI-interacting factor, putative similar to PRLI-interacting factor N [Arabidopsis thaliana] GI:11139276; contains Pfam profile PF01713: Smr domain" 9 2 25 12 At5g58780 "dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative similar to GI:796076" 9 2 25 13 At5g58940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 2 25 14 At5g58980 "ceramidase family protein contains Pfam domain, PF04734: Neutral/alkaline nonlysosomal ceramidase" 9 2 25 15 At5g59130 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 9 2 25 16 At5g59170 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 2 25 17 At5g61780 tudor domain-containing protein / nuclease family protein contains Pfam domains PF00567: Tudor domain and PF00565: Staphylococcal nuclease homologue 9 2 25 18 At5g61840 exostosin family protein contains Pfam profile: PF03016 exostosin family ;supported by cDNA gi|23821293|dbj|AB080693.1|; 9 2 25 19 At5g62030 diphthamide synthesis DPH2 family protein contains InterPro accession IPR002728: Diphthamide synthesis DPH2 protein 9 2 25 20 At5g62090 expressed protein 9 2 25 21 At5g62240 "expressed protein various predicted proteins, Arabidopsis thaliana; expression supported by MPSS" 9 2 25 22 At5g62300 "40S ribosomal protein S20 (RPS20C) ribosomal protein S20, Arabidopsis thaliana, PIR:T12992" 9 2 25 23 At5g62470 myb family transcription factor (MYB96) contains Pfam profile: PF00249 myb-like DNA-binding domain 9 2 25 24 At5g62520 expressed protein 9 2 25 25 At5g65060 MADS-box protein (MAF3) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam profile PF01486: K-box region 9 2 26 1 At5g65120 expressed protein 9 2 26 2 At5g65260 polyadenylate-binding protein family protein / PABP family protein low similarity to poly(A)-binding protein II [Drosophila melanogaster] GI:6007612; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain 9 2 26 3 At5g65320 basic helix-loop-helix (bHLH) family protein contains similarity to bHLH DNA-binding protein 9 2 26 4 At5g65480 expressed protein 9 2 26 5 At5g65530 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 9 2 26 6 At5g65687 "transporter-related low similarity to spinster membrane proteins from [Drosophila melanogaster] GI:12003976, GI:12003972, GI:12003974, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein" 9 2 26 7 At5g65740 expressed protein 9 2 26 8 ath-MIR172e miRNA gene Arabidopsis thaliana miR172e stem-loop 9 2 26 9 ath-MIR397a miRNA gene Arabidopsis thaliana miR397a stem-loop 9 2 26 10 ath-MIR169i miRNA gene Arabidopsis thaliana miR169i stem-loop 9 2 26 11 ath-MIR395a miRNA gene Arabidopsis thaliana miR395a stem-loop 9 2 26 12 3xSSC 3xSSC 9 2 26 13 3xSSC 3xSSC 9 2 26 14 3xSSC 3xSSC 9 2 26 15 3xSSC 3xSSC 9 2 26 16 At3g44700 expressed protein contains Pfam profile PF03140: Plant protein of unknown function; expression supported by MPSS 9 2 26 17 At3g44735 phytosulfokines-related contains similarities to phytosulfokines from [Arabidopsis thaliana] 9 2 26 18 At3g44880 Rieske [2Fe-2S] domain-containing protein similar to lethal leaf-spot 1 from Zea mays [gi:1935909]; contains Pfam PF00355 Rieske [2Fe-2S] domain 9 2 26 19 At3g44935 hypothetical protein 9 2 26 20 At3g45100 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative similar to PIG-A from Mus musculus [gi:577723[, Homo sapiens [SP|P37287]; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 9 2 26 21 At3g45140 lipoxygenase (LOX2) identical to SP|P38418 9 2 26 22 At3g45350 "hypothetical protein similar to At4g09400, At2g14330" 9 2 26 23 At3g45410 "lectin protein kinase family protein contains Pfam profiles: PF00069 protein kinase domain, PF00138 legume lectins alpha domain, PF00139 legume lectins beta domain" 9 2 26 24 Blank Blank 9 2 26 25 Blank Blank 9 3 1 1 atc01 Randomly generated negative control 9 3 1 2 atc07 Randomly generated negative control 9 3 1 3 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 9 3 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 9 3 1 5 Alien3 Control: Stratagene Spotreport Alien Oligo 9 3 1 6 Alien9 Control: Stratagene Spotreport Alien Oligo 9 3 1 7 atc05 Randomly generated negative control 9 3 1 8 atc11 Randomly generated negative control 9 3 1 9 At1g02020 nitroreductase family protein contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide 9 3 1 10 At1g02065 squamosa promoter-binding protein-like 8 (SPL8) identical to squamosa promoter binding protein-like 8 [Arabidopsis thaliana] GI:5931679; contains Pfam profile PF03110: SBP domain 9 3 1 11 At1g02170 latex-abundant family protein (AMC1) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 9 3 1 12 At1g02205 CER1 protein identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from [Arabidopsis thaliana] 9 3 1 13 At1g02380 expressed protein 9 3 1 14 At1g02430 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor GI:166586 from [Arabidopsis thaliana]" 9 3 1 15 At1g02620 GTP-binding protein (SAR1A) identical to GTP-binding protein Sar1 (SP:O04834) [Arabidopsis thaliana]; contains domain PF00025: ADP-ribosylation factor family 9 3 1 16 At1g02680 "transcription initiation factor IID (TFIID) 18 kDa subunit (TAFII-18) family protein similar to transcription factor TFIID (SP:Q15543) [Homo sapiens]; contains Pfam PF02269: Transcription initiation factor IID, 18kD subunit" 9 3 1 17 At1g05270 TraB family protein contains Pfam domain PF01963: TraB family 9 3 1 18 At1g05320 "myosin-related similar to non-muscle myosin II heavy chain (GI:19879404) [Loligo pealei]; ESTs gb|AA042402,gb|ATTS1380 come from this gene" 9 3 1 19 At1g05480 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional regulator ATRX homolog {Caenorhabditis elegans}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 9 3 1 20 At1g05540 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 9 3 1 21 At1g05690 TAZ zinc finger family protein / BTB/POZ domain-containing protein contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; similar to p300/CBP acetyltransferase-related protein (GI:12597461) [Arabidopsis thaliana]; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 9 3 1 22 At1g05730 expressed protein contains Pfam profile PF05811: Eukaryotic protein of unknown function (DUF842) 9 3 1 23 At1g05870 expressed protein 9 3 1 24 At1g05900 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 9 3 1 25 At1g08420 "kelch repeat-containing protein / serine/threonine phosphoesterase family protein contains Pfam profiles: PF00149 calcineurin-like phosphoesterase, PF01344 kelch motif" 9 3 2 1 At1g08470 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324] 9 3 2 2 At1g08650 "phosphoenolpyruvate carboxylase kinase identical to phosphoenolpyruvate carboxylase kinase [Arabidopsis thaliana] gi|6318613|gb|AAF06968; contains protein kinase domain, Pfam:PF00069" 9 3 2 3 At1g08680 ARF GAP-like zinc finger-containing protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like zinc finger-containing protein ZiGA4 GI:10441354 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 9 3 2 4 At1g08810 myb family transcription factor (MYB60) 9 3 2 5 At1g08880 "histone H2A, putative Strong similarity to histone H2A Cicer arietinum SP|O65759, Picea abies SP|P35063; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4; ESTs gb|ATTS3874,gb|T46627,gb|T14194 come from this gene" 9 3 2 6 At1g09040 expressed protein 9 3 2 7 At1g09100 "26S protease regulatory subunit 6A, putative identical to SP:O04019 from [Arabidopsis thaliana]" 9 3 2 8 At1g11680 obtusifoliol 14-demethylase (CYP51) identical to obtusifoliol 14-demethylase (GI:14624983) [Arabidopsis thaliana] 9 3 2 9 At1g11740 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 9 3 2 10 At1g11880 expressed protein contains Pfam profile PF04188: Protein of unknown function (DUF409) 9 3 2 11 At1g11920 pectate lyase family protein similar to pectate lyase GI:14289169 from [Salix gilgiana] 9 3 2 12 At1g12070 Rho GDP-dissociation inhibitor family protein similar to SP|P52565 Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha) {Homo sapiens}; contains Pfam profile PF02115: RHO protein GDP dissociation inhibitor 9 3 2 13 At1g12110 nitrate/chlorate transporter (NRT1.1) (CHL1) identical to nitrate/chlorate transporter SP:Q05085 from [Arabidopsis thaliana]; contains Pfam profile: PF00854 POT family 9 3 2 14 At1g12290 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 9 3 2 15 At1g12350 DNA/panthothenate metabolism flavoprotein family protein contains Pfam domain PF04127: DNA / pantothenate metabolism flavoprotein 9 3 2 16 At1g15110 phosphatidyl serine synthase family protein contains Pfam profile: PF03034 phosphatidyl serine synthase 9 3 2 17 At1g15140 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene 9 3 2 18 At1g15260 expressed protein EST gb|N65467 comes from this gene 9 3 2 19 At1g15330 "CBS domain-containing protein low similarity to SP|Q9MYP4 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Sus scrofa}; contains Pfam profile PF00571: CBS domain" 9 3 2 20 At1g15430 expressed protein 9 3 2 21 At1g15500 "chloroplast ADP, ATP carrier protein, putative / ADP, ATP translocase, putative / adenine nucleotide translocase, putative strong similarity to SP|Q39002 Chloroplast ADP,ATP carrier protein 1, chloroplast precursor (ADP/ATP translocase 1) (Adenine nucleotide translocase 1) {Arabidopsis thaliana}; contains Pfam profile PF03219: TLC ATP/ADP transporter" 9 3 2 22 At1g15700 "ATP synthase gamma chain 2, chloroplast (ATPC2) identical to SP|Q01909 ATP synthase gamma chain 2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis thaliana}; contains Pfam profile: PF00231 ATP synthase; similar to ATP synthase gamma-subunit GI:21241 from [Spinacia oleracea]" 9 3 2 23 At1g15760 expressed protein preedicted by genemark.hmm; expression supported by MPSS 9 3 2 24 At1g18520 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 9 3 2 25 At1g18580 glycosyltransferase family protein 8 contains Pfam profile PF01501: Glycosyl transferase family 8; protein sequence is truncated due to a frameshift. This could be a pseudogene or a sequencing error may exist. 9 3 3 1 At1g18750 MADS-box protein (AGL65) similar to homeodomain transcription factor (AGL30) GI:3461830 from [Arabidopsis thaliana]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); PMID: 12837945 9 3 3 2 At1g18810 phytochrome kinase substrate-related contains weak similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 [Arabidopsis thaliana] 9 3 3 3 At1g19000 myb family transcription factor similar to MybSt1 GI:7705206 from [Solanum tuberosum] 9 3 3 4 At1g19025 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 9 3 3 5 At1g19180 expressed protein 9 3 3 6 At1g19230 respiratory burst oxidase protein E (RbohE) / NADPH oxidase nearly identical to respiratory burst oxidase protein E GI:3242787 [gi:3242787] from [Arabidopsis thaliana] 9 3 3 7 At1g22140 expressed protein 9 3 3 8 At1g22190 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.4 GI:2281633 from [Arabidopsis thaliana]" 9 3 3 9 At1g22310 "DNA-binding protein-related contains Pfam profiles PF02178: AT hook motif, PF01429: Methyl-CpG binding domain" 9 3 3 10 At1g22360 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 3 3 11 At1g22540 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 9 3 3 12 At1g22600 hypothetical protein 9 3 3 13 At1g22750 expressed protein 9 3 3 14 At1g22810 "AP2 domain-containing transcription factor, putative Contains similarity to transcription factor (TINY) isolog T02O04.22 gb|2062174 from A. thaliana BAC gb|AC001645" 9 3 3 15 At1g26360 "hydrolase, alpha/beta fold family protein similar to SP|Q40708 PIR7A protein {Oryza sativa}, ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: alpha/beta hydrolase fold" 9 3 3 16 At1g26420 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 9 3 3 17 At1g26610 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 3 3 18 At1g26665 expressed protein 9 3 3 19 At1g26798 Expressed protein 9 3 3 20 At1g26840 origin recognition complex subunit 6 family protein (ORC6) weak similarity to SP|Q9Y1B2 Origin recognition complex subunit 6 {Drosophila melanogaster}; contains Pfam profile PF05460: Origin recognition complex subunit 6 (ORC6) 9 3 3 21 At1g27040 "nitrate transporter, putative contains Pfam profile: PF00854 POT family; similar to nitrate transporter (NTL1) GI:3377517 [Arabidopsis thaliana]" 9 3 3 22 At1g27100 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 9 3 3 23 At1g29960 "signal peptidase I family protein / MADS-box protein-related similar to inner mitochondrial membrane peptidase 2 [Homo sapiens] GI:14030456; contains Pfam profiles PF00461: Signal peptidase I, contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL64" 9 3 3 24 At1g30000 glycoside hydrolase family 47 protein similar to GI:5579331 from [Homo sapiens]; contains Pfam profile PF01532: Glycosyl hydrolase family 47 9 3 3 25 At1g30170 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 9 3 4 1 At1g30240 PELP1-related contains weak similarity to PELP1 [Homo sapiens] gi|21426922|gb|AAC17708 9 3 4 2 At1g30460 "zinc finger (CCCH-type) family protein / YT521-B-like family protein low similarity to cleavage and polyadenylation specificity factor 30 kDa subunit [Bos taurus] GI:2327052; contains Pfam profiles PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF04146: YT521-B-like family; supporting cDNA gi|24415581|gb|AY140901.1|" 9 3 4 3 At1g30500 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) 9 3 4 4 At1g30650 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 9 3 4 5 At1g30710 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 9 3 4 6 At1g33730 "cytochrome P450, putative Similar to cytochrome P450 76C2 (SP:O64637)[Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 9 3 4 7 At1g33800 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 9 3 4 8 At1g33970 "avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family" 9 3 4 9 At1g34010 expressed protein 9 3 4 10 At1g34190 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) protein; similar to NAM protein GI:6066595 [Petunia hybrida]; nam-like protein 9 (GI:21105746) [Petunia x hybrida]; NAC1 GI:7716952 [Medicago truncatula] 9 3 4 11 At1g34270 exostosin family protein contains Pfam profile: PF03016 Exostosin family 9 3 4 12 At1g34430 "dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase (LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain" 9 3 4 13 At1g34500 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to wax synthase [Simmondsia chinensis] GI:5020219; contains Pfam profile PF03062: MBOAT family 9 3 4 14 At1g44750 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 9 3 4 15 At1g44800 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 9 3 4 16 At1g44990 hypothetical protein 9 3 4 17 At1g45090 "Ulp1 protease family protein similar to At5g28270, At2g12100, At2g05450, At2g16180, At2g06750; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 9 3 4 18 At1g45249 ABA-responsive element-binding protein 1 (AREB1) identical to ABA-responsive element binding protein 1 (AREB1) [Arabidopsis thaliana] GI:9967417 9 3 4 19 At1g45545 hypothetical protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827) 9 3 4 20 At1g47220 "cyclin, putative similar to cyclin A-like protein [Nicotiana tabacum] GI:1064931, A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 9 3 4 21 At1g47260 bacterial transferase hexapeptide repeat-containing protein contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats) 9 3 4 22 At1g50180 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 9 3 4 23 At1g50260 C2 domain-containing protein low similarity to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain 9 3 4 24 At1g50450 expressed protein 9 3 4 25 At1g50510 indigoidine synthase A family protein similar to IndA protein (GI:7576263) [Erwinia chrysanthemi]; contains Pfam profile PF04227: Indigoidine synthase A like protein 9 3 5 1 At1g50700 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|1399265|gb|AAB03242" 9 3 5 2 At1g50760 hypothetical protein 9 3 5 3 At1g50970 "membrane trafficking VPS53 family protein contains Pfam domain PF04100: Vps53-like, N-terminal" 9 3 5 4 At1g51040 "phosphatidylinositol 4-kinase, putative similar to phosphatidylinositol 4-kinase alpha [Daucus carota] GI:3452273; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase" 9 3 5 5 At1g53680 "glutathione S-transferase, putative similar to GI:2853219 from [Carica papaya]" 9 3 5 6 At1g53730 "leucine-rich repeat transmembrane protein kinase, putative similar to GI:3360289 from [Zea mays] (Plant Mol. Biol. 37 (5), 749-761 (1998))" 9 3 5 7 At1g53900 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profiles PF04525: Protein of unknown function (DUF567), PF01008: Initiation factor 2 subunit family" 9 3 5 8 At1g53950 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 9 3 5 9 At1g54090 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit 9 3 5 10 At1g54130 "RelA/SpoT protein, putative (RSH3) identical to RSH3 (RelA/SpoT homolog) GI:7141308 from [Arabidopsis thaliana]; contains Pfam profiles PF01966: HD domain, PF04607: Region found in RelA / SpoT proteins" 9 3 5 11 At1g54290 "eukaryotic translation initiation factor SUI1, putative similar to P|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 9 3 5 12 At1g54330 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM protein GI:1279639 from [Petunia hybrida] 9 3 5 13 At1g57943 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 9 3 5 14 At1g58060 "helicase domain-containing protein contains similarity to SP|P24785 Dosage compensation regulator (Male-less protein) (No action potential protein) {Drosophila melanogaster}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 9 3 5 15 At1g58235 expressed protein 9 3 5 16 At1g58280 expressed protein 9 3 5 17 At1g58440 "squalene monooxygenase, putative / squalene epoxidase, putative similar to SP|O65404 (SE 1,1), SP|O65402 (SE 1,2) 6566341 dbj AB008021.1 AB008021" 9 3 5 18 At1g58602 "disease resistance protein (CC-NBS-LRR class), putative similar to diesease resistance protein rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631" 9 3 5 19 At1g59530 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 9 3 5 20 At1g59580 "mitogen-activated protein kinase, putative / MAPK, putative (MPK2) identical to mitogen-activated protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana] SWISS-PROT:Q39022; PMID:12119167" 9 3 5 21 At1g62500 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to auxin down regulated GB:X69640 GI:296442 from [Glycine max]; contains Pfam profile PF00234: Protease inhibitor/seed storage/LTP family 9 3 5 22 At1g62570 flavin-containing monooxygenase family protein / FMO family protein low similarity to flavin-containing monooxygenase FMO3 [Rattus norvegicus] GI:12006730; contains Pfam profile PF00743: Flavin-binding monooxygenase-like 9 3 5 23 At1g62740 "stress-inducible protein, putative similar to sti (stress inducible protein) [Glycine max] GI:872116; contains Pfam profile PF00515 TPR Domain" 9 3 5 24 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 9 3 5 25 At1g62930 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 6 1 At1g62975 basic helix-loop-helix (bHLH) family protein (bHLH125) contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supporting cDNA gi|20805889|gb|AF506369.1| 9 3 6 2 At1g63130 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 6 3 At1g63180 "UDP-glucose 4-epimerase, putative / UDP-galactose 4-epimerase, putative / Galactowaldenase, putative strong similarity to SP|Q42605 [GI:1143392] from [Arabidopsis thaliana] (Arch. Biochem. Biophys. 327 (1), 27-34 (1996))" 9 3 6 4 At1g65910 no apical meristem (NAM) family protein similar to jasmonic acid 2 GI:6175246 from [Lycopersicon esculentum]; similar to NAC2 (GI:6456751) {Arabidopsis thaliana} 9 3 6 5 At1g65980 "peroxiredoxin type 2, putative strong similarity to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] GI:4928472; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 9 3 6 6 At1g66145 "CLE18, putative CLAVATA3/ESR-Related 18 (CLE18)" 9 3 6 7 At1g66180 "aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease profile; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 9 3 6 8 At1g66345 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 9 3 6 9 At1g66400 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced from SP:P25070 [Arabidopsis thaliana]; contains Pfam profile: PF00036 EF hand (4 copies)" 9 3 6 10 At1g66570 "sucrose transporter, putative / sucrose-proton symporter, putative similar to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094, sucrose transporter [Arabidopsis thaliana] GI:12057172; contains Pfam profile PF00083: major facilitator superfamily protein" 9 3 6 11 At1g66620 "seven in absentia (SINA) protein, putative similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family" 9 3 6 12 At1g69310 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 9 3 6 13 At1g69340 appr-1-p processing enzyme family protein contains Pfam domain PF01661: Appr-1-p processing enzyme family 9 3 6 14 At1g69490 no apical meristem (NAM) family protein similar to N-term half of NAC domain protein NAM [Arabidopsis thaliana] GI:4325282 9 3 6 15 At1g69523 "UbiE/COQ5 methyltransferase family protein low similarity to SP|Q05197 Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17) [Rhodopseudomonas sphaeroides] {Rhodobacter sphaeroides}; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 9 3 6 16 At1g69680 expressed protein similar to MOG1 isoform A (GI:9864064) [Homo sapiens] 9 3 6 17 At1g69740 "porphobilinogen synthase, putative / delta-aminolevulinic acid dehydratase, putative similar to delta-aminolevulinic acid dehydratase (Alad) GI:493019 [SP|P43210] from Glycine max, SP|P24493 from Spinacia oleracea, SP|P30124 from Pisum sativum" 9 3 6 18 At1g69920 "glutathione S-transferase, putative similar to glutathione transferase GB:CAA09188 [Alopecurus myosuroides]; supported by cDNA gi:15451157 gb:AY050343." 9 3 6 19 At1g69980 expressed protein 9 3 6 20 At1g72790 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 3 6 21 At1g72830 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 9 3 6 22 At1g73010 "expressed protein similar to phosphatase, orphan 1 (GI:20196841) [Mus musculus], (GI:20196839) [Homo sapiens]; contains TIGRFAM TIGR01489: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase profile; contains TIGRFAM TIGR01488: HAD-superfamily hydrolase, subfamily IB (PSPase-like)" 9 3 6 23 At1g73080 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor protein kinase GI:1389566 from [Arabidopsis thaliana]" 9 3 6 24 At1g73220 sugar transporter family protein contains Pfam profile: PF00083 sugar (and other) transporter 9 3 6 25 At1g73280 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare]; glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase; 9 3 7 1 At1g73450 "protein kinase, putative similar to nuclear serine/threonine protein kinase GI:3582644 from [Rattus norvegicus]" 9 3 7 2 At1g73500 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK9) mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 9 3 7 3 AT5G57480 PC-1 C04 9 3 7 4 3XSSC PC-1 C16 9 3 7 5 AT1G29930 PC-1 G04 9 3 7 6 3XSSC PC-1 G16 9 3 7 7 AT3G44150 PC-1 K04 9 3 7 8 3XSSC PC-1 K16 9 3 7 9 AT4G00810 PC-1 O04 9 3 7 10 3XSSC PC-1 O16 9 3 7 11 At1g76350 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 9 3 7 12 At1g76400 ribophorin I family protein similar to ribophorin I [Sus scrofa] GI:9857227; contains Pfam profile PF04597: Ribophorin I 9 3 7 13 At1g76520 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 9 3 7 14 At1g76570 chlorophyll A-B binding family protein similar to chlorophyll A-B binding protein GB:P12470 [Nicotiana plumbaginifolia]; contains Pfam profile: PF00504 Chlorophyll A-B binding proteins 9 3 7 15 At1g76740 expressed protein weak similarity to fimbriae-associated protein Fap1 (GI:3929312) [Streptococcus parasanguinis]; weak similarity to 1MDa_1 protein (GI:24620455) [Caenorhabditis elegans] 9 3 7 16 At1g76800 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 9 3 7 17 At1g76930 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 9 3 7 18 At1g76970 "VHS domain-containing protein / GAT domain-containing protein weak similarity to HGF-regulated tyrosine kinase substrate [Mus musculus] GI:1089781; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 9 3 7 19 At1g79630 protein phosphatase 2C family protein / PP2C family protein contains Pfam PF00481 : Protein phosphatase 2C domain; similar to protein phosphatase-2C GI:3643088 from [Mesembryanthemum crystallinum] 9 3 7 20 At1g79670 "wall-associated kinase, putative similar to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]; isoform contains non-consensus AT-acceptor splice site." 9 3 7 21 At1g79810 "Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: zinc finger C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino terminal region" 9 3 7 22 At1g79850 "30S ribosomal protein S17, chloroplast / CS17 (RPS17) identical to 30S ribosomal protein S17, chloroplast precursor GB:P16180 [Arabidopsis thaliana]" 9 3 7 23 At1g79975 expressed protein 9 3 7 24 At1g80030 "DNAJ heat shock protein, putative similar to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix rhusiopathiae}; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats)" 9 3 7 25 At1g80190 expressed protein 9 3 8 1 At1g80245 expressed protein 9 3 8 2 At2g03090 "expansin, putative (EXP15) identical to SWISS-PROT:O80622 alpha-expansin 15 precursor (At-EXP15)[Arabidopsis thaliana]; alpha-expansin gene family, PMID:11641069" 9 3 8 3 At2g03160 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At19), putative E3 ubiquitin ligase; similar to Skp1 GI:4959710 from [Medicago sativa]" 9 3 8 4 At2g03340 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 9 3 8 5 At2g03410 Mo25 family protein similar to MO25 protein (early mouse development protein family) [Mouse] SWISS-PROT:Q06138 9 3 8 6 At2g03580 "F-box family protein-related supported by tandem duplication of F-box protein family, AtFBX7 (GI:20197899) (TIGR_Ath1:At2g03560) [Arabidopsis thaliana]" 9 3 8 7 At2g03640 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)" 9 3 8 8 At2g03830 expressed protein 9 3 8 9 At2g03880 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 3 8 10 At2g07721 hypothetical protein 9 3 8 11 At2g07734 ribosomal protein S4 (RPS4) identical to small ribosomal protein 4 [Arabidopsis thaliana] GI:1460051 9 3 8 12 At2g09865 hypothetical protein 9 3 8 13 At2g10050 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 9 3 8 14 At2g10465 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 9 3 8 15 At2g10602 hypothetical protein 9 3 8 16 At2g11090 expressed protein 9 3 8 17 At2g11370 hypothetical protein 9 3 8 18 At2g16330 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 9 3 8 19 At2g16390 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to RAD54 [Drosophila melanogaster] GI:1765914; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 9 3 8 20 At2g16530 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to Arabidopsis thaliana DET2 [gi:1280611]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544 9 3 8 21 At2g16600 "peptidyl-prolyl cis-trans isomerase, cytosolic / cyclophilin / rotamase (ROC3) identical to cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455" 9 3 8 22 At2g16810 F-box family protein (FBX8) contains F-box domain PF:00646 9 3 8 23 At2g16880 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 8 24 At2g17020 F-box family protein (FBL10) contains similarity to F-box protein Partner of Paired GI:10441427 from [Drosophila melanogaster] 9 3 8 25 At2g17050 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 3 9 1 At2g19890 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 9 3 9 2 At2g19940 "semialdehyde dehydrogenase family protein similar to N-acetyl-glutamyl-phosphate reductase [Campylobacter jejuni] GI:6650362; contains Pfam profiles PF02774: Semialdehyde dehydrogenase dimerisation domain, PF01118: Semialdehyde dehydrogenase NAD binding domain" 9 3 9 3 At2g20100 ethylene-responsive family protein similar to Ethylene-regulated ER33 protein (GI:5669656) [Lycopersicon esculentum]; PMID: 12679534; putative bHLH133 transcription factor 9 3 9 4 At2g20142 expressed protein 9 3 9 5 At2g20340 "tyrosine decarboxylase, putative similar to tyrosine/dopa decarboxylase [Papaver somniferum] GI:3282527, SP|Q06087 Tyrosine decarboxylase 3 (EC 4.1.1.25) {Petroselinum crispum}; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain" 9 3 9 6 At2g20400 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 3 9 7 At2g20560 DNAJ heat shock family protein SP|Q9UDY4 DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) {Homo sapiens}; contains Pfam profile PF00226: DnaJ domain 9 3 9 8 At2g20590 "reticulon family protein non-consensus AA donor splice site at 46485 and non-consensus GG acceptor splice site at 46563, confirmed by Ceres cDNA 1885; contains Pfam profile PF02453: Reticulon" 9 3 9 9 At2g23240 plant EC metallothionein-like family 15 protein identical to EC protein homolog 2 (SP:Q42377) {Arabidopsis thaliana}; identical to an EST: GB:X92116:ATECPRHOM; contains a vertebrate metallothionein signature (PS00203); contains Pfam profile PF02068: Plant PEC family metallothionein 9 3 9 10 At2g23290 myb family transcription factor 9 3 9 11 At2g23470 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 9 3 9 12 At2g23540 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 9 3 9 13 At2g23710 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287; this may be a pseudogene; the protein appears slightly truncated on the 3' end due to intervening stop codon." 9 3 9 14 At2g23770 "protein kinase family protein / peptidoglycan-binding LysM domain-containing protein contains Pfam domains, PF00069: Protein kinase domain and PF01476: LysM domain" 9 3 9 15 At2g23960 "defense-related protein, putative similar to defense-related protein [Brassica carinata] GI:14009290" 9 3 9 16 At2g23990 plastocyanin-like domain-containing protein 9 3 9 17 At2g26850 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 9 3 9 18 At2g26890 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 9 3 9 19 At2g27030 "calmodulin-2/3/5 (CAM5) (TCH1) identical to calmodulin GI:474183 from [Arabidopsis thaliana], SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}" 9 3 9 20 At2g27080 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related contains 1 transmembrane domain; similar to hin1 homolog (GI:13122296) [Arabidopsis thaliana]; similar to hin1 (GI:22830759) [Nicotiana tabacum] 9 3 9 21 At2g27240 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 9 3 9 22 At2g27280 hypothetical protein 9 3 9 23 At2g27410 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 9 3 9 24 At2g27450 "carbon-nitrogen hydrolase family protein low similarity to beta-alanine synthase [Drosophila melanogaster] GI:14334063; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 9 3 9 25 At2g30210 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 9 3 10 1 At2g30270 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 9 3 10 2 At2g30420 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 3 10 3 At2g30480 expressed protein 9 3 10 4 At2g30620 histone H1.2 nearly identical to SP|P26569 Histone H1.2 {Arabidopsis thaliana} 9 3 10 5 At2g30670 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 9 3 10 6 At2g30820 expressed protein 9 3 10 7 At2g30880 pleckstrin homology (PH) domain-containing protein contains Pfam profile PF00169: PH domain 9 3 10 8 At2g33470 glycolipid transfer protein-related similar to phosphoinositol 4-phosphate adaptor protein-2 (GI:14165198) [Homo sapiens]; similar to Glycolipid transfer protein (GLTP) (Swiss-Prot:Q9JL62) [Mus musculus]; similar to Glycolipid transfer protein (GLTP) (Swiss-Prot:Q9NZD2) [Homo sapiens] 9 3 10 9 At2g33510 expressed protein 9 3 10 10 At2g33690 "late embryogenesis abundant protein, putative / LEA protein, putative similar to responsive to water deficit, novel late embryogenesis abundant-like protein PvLEA-18 (GI:2347086) [Phaseolus vulgaris]" 9 3 10 11 At2g33735 DNAJ heat shock N-terminal domain-containing protein similar to SP|P30725 Chaperone protein dnaJ Clostridium acetobutylicum; contains Pfam profile PF00226 DnaJ domain 9 3 10 12 At2g33830 dormancy/auxin associated family protein contains Pfam profile: PF05564 dormancy/auxin associated protein 9 3 10 13 At2g33855 expressed protein 9 3 10 14 At2g34090 expressed protein similar to GP|1301832|gnl|PID|e239862|Z71287 9 3 10 15 At2g34150 expressed protein 9 3 10 16 At2g36740 YL1 nuclear family protein similar to YL-1 protein (Transcription factor-like 1) (Swiss-Prot:Q15906) [Homo sapiens] 9 3 10 17 At2g36800 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 9 3 10 18 At2g36940 hypothetical protein 9 3 10 19 At2g36990 "RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) identical to RNA polymerase sigma subunit SigF [Arabidopsis thaliana] GI:7209640; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2; identical to cDNA partial mRNA for putative sigma-like transcription factor (sig6 gene) GI:6273429" 9 3 10 20 At2g37130 peroxidase 21 (PER21) (P21) (PRXR5) identical to SP|Q42580 Peroxidase 21 precursor (EC 1.11.1.7) (Atperox P21) (PRXR5) (ATP2a/ATP2b) {Arabidopsis thaliana} 9 3 10 21 At2g37170 plasma membrane intrinsic protein 2B (PIP2B) / aquaporin PIP2.2 (PIP2.2) identical to SP|P43287 Plasma membrane intrinsic protein 2B {Arabidopsis thaliana} 9 3 10 22 At2g37340 "splicing factor RSZ33 (RSZ33) nearly identical to splicing factor RSZ33 [Arabidopsis thaliana] GI:9843663; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00098: Zinc knuckle" 9 3 10 23 At2g37390 heavy-metal-associated domain-containing protein contains Pfam PF00403: Heavy-metal-associated domain; similar to copper homeostasis factor (CCH) (ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis thaliana] 9 3 10 24 At2g39990 eukaryotic translation initiation factor 3 subunit 5 / eIF-3 epsilon / eIF3f (TIF3F1) identical to SP|O04202 Eukaryotic translation initiation factor 3 subunit 5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f) {Arabidopsis thaliana}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 9 3 10 25 At2g40030 "DNA-directed RNA polymerase alpha subunit family protein contains InterPro accession IPR000722: RNA polymerase, alpha subunit" 9 3 11 1 At2g40130 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 9 3 11 2 At2g40190 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 9 3 11 3 At2g40350 "AP2 domain-containing transcription factor, putative (DREB2) similar to DREB2A (GP:3738230) and DREB2B (GP:3738232) [Arabidopsis thaliana];;" 9 3 11 4 At2g40400 expressed protein similar to GI:7572912 (At3g56140)[Arabidopsis thaliana] 9 3 11 5 At2g40540 "potassium transporter, putative (KT2) identical to putative potassium transporter AtKT2p [Arabidopsis thaliana] gi|2384671|gb|AAC49845, strong similarity to potassium transporter HAK2p [Mesembryanthemum crystallinum] GI:14091471; KUP/HAK/KT Transporter family member, PMID:11500563" 9 3 11 6 At2g40600 appr-1-p processing enzyme family protein contains Pfam domain PF01661: Appr-1-p processing enzyme family 9 3 11 7 At2g43160 epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Af10-protein (GI:1724114) [Avena fatua] 9 3 11 8 At2g43190 ribonuclease P family protein similar to Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4) (Swiss-Prot:O95707) [Homo sapiens] 9 3 11 9 At2g43360 biotin synthase (BioB) (BIO2) identical to SP|P54967 Pfam profile PF04055: radical SAM domain protein 9 3 11 10 At2g43430 "hydroxyacylglutathione hydrolase, mitochondrial / glyoxalase II (GLX2-1) identical to SP|O24495 Hydroxyacylglutathione hydrolase, mitochondrial precursor (EC 3.1.2.6) (Glyoxalase II) (Glx II) {Arabidopsis thaliana}" 9 3 11 11 At2g43590 "chitinase, putative similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus]" 9 3 11 12 At2g43650 Sas10/U3 ribonucleoprotein (Utp) family protein contains Pfam profile PF04000: Sas10/Utp3 family; contains Prosite PS00761: Signal peptidases I signature 3; weak similarity to PEBP2 beta-binding protein / charged amino acid rich leucine zipper factor-1 (GI:12061569) [Mus musculus] 9 3 11 13 At2g43795 hypothetical protein 9 3 11 14 At2g43850 "ankyrin protein kinase, putative (APK1) similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674;contains Pfam profile PF00069: Protein kinase domain; contains Pfam profile PF00023: Ankyrin repeat" 9 3 11 15 At2g46490 "expressed protein (APS2) identical to cDNA Aps2, partial cds GI:4519894" 9 3 11 16 At2g46530 "transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding domain" 9 3 11 17 At2g46690 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Phaseolus aureus] 9 3 11 18 At2g46750 FAD-binding domain-containing protein low similarity to SP|P58710 L-gulonolactone oxidase (EC 1.1.3.8) {Mus musculus}; contains Pfam profile PF01565: FAD binding domain 9 3 11 19 At2g46880 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 9 3 11 20 At2g46930 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 9 3 11 21 At2g47090 "zinc finger (C2H2 type) family protein contains Prosite PS00028: Zinc finger, C2H2 type, domain" 9 3 11 22 At2g47150 short-chain dehydrogenase/reductase (SDR) family protein similar to stem secoisolariciresinol dehydrogenase GI:13752458 from [Forsythia x intermedia] 9 3 11 23 At3g02460 "plant adhesion molecule, putative strong similarity to plant adhesion molecule 1 [Arabidopsis thaliana] GI:3511223; contains Pfam profile PF00566: TBC domain" 9 3 11 24 At3g02520 14-3-3 protein GF14 nu (GRF7) identical to 14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis thaliana] 9 3 11 25 At3g02650 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 12 1 At3g02710 nuclear associated protein-related / NAP-related similar to Nuclear associated protein (NAP) (NYD-SP19) (Swiss-Prot:Q8WYA6) [Homo sapiens] 9 3 12 2 At3g02875 IAA-amino acid hydrolase 1 (ILR1) identical to IAA-amino acid hydrolase 1 (ILR1) [Arabidopsis thaliana] SWISS-PROT:P54968 9 3 12 3 At3g02920 replication protein-related similar to replication protein A 30kDa [Oryza sativa (japonica cultivar-group)] GI:13516746; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain 9 3 12 4 At3g03100 NADH:ubiquinone oxidoreductase family protein contains Pfam PF05071: NADH:ubiquinone oxidoreductase 17.2 kD subunit; similar to ethylene-regulated ER6 protein (GI:5669654) [Lycopersicon esculentum]; identical to Probable NADH-ubiquinone oxidoreductase subunit B17.2 (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B17.2) (CI-B17.2) (Swiss-Prot:Q9M9M9) [Arabidopsis thaliana] 9 3 12 5 At3g03160 expressed protein 9 3 12 6 At3g05720 "importin alpha-1 subunit, putative similar to importin alpha subunit (Karyopherin alpha subunit) (KAP alpha) SP:O22478 from [Lycopersicon esculentum]" 9 3 12 7 At3g05770 expressed protein 9 3 12 8 At3g05937 expressed protein no suitable start codon was identified. 9 3 12 9 At3g05980 expressed protein 9 3 12 10 At3g06110 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 9 3 12 11 At3g06150 expressed protein 9 3 12 12 At3g06320 ribosomal protein L33 family protein similar to 50S ribosomal protein L33 GB:Q9ZC89 [Rickettsia prowazekii] 9 3 12 13 At3g06380 "F-box family protein / tubby family protein similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to C-terminal half of tubby protein (A mutation in the tub gene causes maturity-onset obesity, insulin resistance, and sensory deficits) (GB:P50586) (GI:6730158)[Mus musculus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family; similar to Tubby protein homolog (Swiss-Prot:O88808) [Rattus norvegicus]" 9 3 12 14 At3g09310 expressed protein 9 3 12 15 At3g09370 myb family transcription factor (MYB3R3) contains Pfam profile: Myb DNA-binding proteins; identical to cDNA putative c-myb-like transcription factor (MYB3R3) GI:15375285 9 3 12 16 At3g09540 pectate lyase family protein simliar to style development-specific protein 9612 SP:P24396 from [Lycopersicon esculentum] 9 3 12 17 At3g09600 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 3 12 18 At3g09770 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 9 3 12 19 At3g09800 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 9 3 12 20 At3g09960 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 9 3 12 21 At3g10020 expressed protein 9 3 12 22 At3g12400 tumour susceptibility gene 101 (TSG101) family protein contains Pfam profile PF05743: Tumour susceptibility gene 101 protein (TSG101); similar to Tumor susceptibility gene 101 protein (Swiss-Prot:Q99816) [Homo sapiens] 9 3 12 23 At3g12460 hypothetical protein 9 3 12 24 At3g12630 "zinc finger (AN1-like) family protein contains Pfam domain, PF01428: AN1-like Zinc finger" 9 3 12 25 At3g12685 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 9 3 13 1 At3g12850 COP9 signalosome complex-related / CSN complex-related low similarity to SP|P45432 COP9 signalosome complex subunit 1 (CSN complex subunit 1) (COP11 protein) (FUSCA protein FUS6) {Arabidopsis thaliana} 9 3 13 2 At3g12910 expressed protein 9 3 13 3 At3g13060 expressed protein contains Pfam profile PF04146: YT521-B-like family 9 3 13 4 At3g13080 ABC transporter family protein almost identical to MRP-like ABC transporter GI:2316016 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter 9 3 13 5 At3g15400 "anther development protein, putative similar to anther development protein ATA20 GB:AAC50042 GI:2708813 from [Arabidopsis thaliana]" 9 3 13 6 At3g15460 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 9 3 13 7 At3g15620 "6-4 photolyase (UVR3) identical to 6-4 photolyase (UVR3) GB:AB003687 [Arabidopsis thaliana] (Nucleic Acids Res. 26 (2), 638-644 (1998))" 9 3 13 8 At3g15680 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 9 3 13 9 At3g15840 expressed protein 9 3 13 10 At3g15880 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies)" 9 3 13 11 At3g16040 expressed protein 9 3 13 12 At3g16100 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 9 3 13 13 At3g18760 ribosomal protein S6 family protein contains TIGRFAM profile TIGR00166: ribosomal protein S6 9 3 13 14 At3g18790 expressed protein 9 3 13 15 At3g18940 clast3-related contains Prosite PS00626: Regulator of chromosome condensation (RCC1) signature 2; similar to Clast3 protein (GI:9857631) [Mus musculus] 9 3 13 16 At3g19000 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|P24397 Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine 6-beta- hydroxylase) {Hyoscyamus niger}, SP|Q05965 Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone- 3-hydroxylase) (F3H) (FHT) {Matthiola incana}; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 9 3 13 17 At3g19150 kip-related protein 6 (KRP6) / cyclin-dependent kinase inhibitor 6 (ICK6) identical to cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis thaliana] GI:14422295 9 3 13 18 At3g19210 "DNA repair protein RAD54, putative similar to RAD54 GB:CAA71278 from [Drosophila melanogaster] (Mol. Cell. Biol.(1997) 17 (10), 6097-6104)" 9 3 13 19 At3g19380 U-box domain-containing protein contains similarity to immediate-early fungal elicitor protein CMPG1 GI:14582200 [Petroselinum crispum]; contains Pfam profile PF04564: U-box domain 9 3 13 20 At3g19430 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 9 3 13 21 At3g22150 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 3 13 22 At3g22210 expressed protein 9 3 13 23 At3g22370 "alternative oxidase 1a, mitochondrial (AOX1A) identical to GB:Q39219 [SP|Q39219] from [Arabidopsis thaliana]" 9 3 13 24 At3g22420 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 3 13 25 At3g22520 expressed protein 9 3 14 1 At3g22580 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 9 3 14 2 At3g22770 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 9 3 14 3 At3g22830 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 9 3 14 4 At3g25727 hypothetical protein 9 3 14 5 At3g25780 "allene oxide cyclase, putative / early-responsive to dehydration protein, putative / ERD protein, putative similar to allene oxide cyclase GI:8977961 from [Lycopersicon esculentum]; similar to early-responsive to dehydration (ERD12) protein [GI:15320414]; contains Pfam profile PF06351: Allene oxide cyclase" 9 3 14 6 At3g25905 "CLE27, putative CLAVATA3/ESR-Related 27 (CLE27)" 9 3 14 7 At3g25960 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 9 3 14 8 At3g26115 expressed protein 9 3 14 9 At3g26150 "cytochrome P450 71B16, putative (CYP71B16) identical to cytochrome P450 71B16 (SP:Q9LTM7) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 9 3 14 10 At3g26310 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 9 3 14 11 At3g26370 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 9 3 14 12 At3g29070 emp24/gp25L/p24 family protein similar to SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Oryctolagus cuniculus}; contains Pfam profile: PF01105 emp24/gp25L/p24 family 9 3 14 13 At3g29130 expressed protein ; expression supported by MPSS 9 3 14 14 At3g29250 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata]; contains Pfam profile: PF00106 short chain dehydrogenase 9 3 14 15 At3g29290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 14 16 At3g29420 geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-related fragment similar to farnesyltranstransferase precursor GB:T10452 from [Sinapis alba] 9 3 14 17 At3g29575 expressed protein 9 3 14 18 At3g29750 hypothetical protein 9 3 14 19 At3g29786 hypothetical protein 9 3 14 20 At3g43860 glycosyl hydrolase family 9 protein similar to cellulase GI:575404 from [Sambucus nigra]. 9 3 14 21 At3g43920 "ribonuclease III family protein similar to RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF02170: PAZ domain, PF00636: RNase3 domain" 9 3 14 22 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 9 3 14 23 At3g44150 expressed protein hypothetical proteins - Arabidopsis thaliana 9 3 14 24 At3g44330 expressed protein 9 3 14 25 At3g44400 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 3 15 1 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 9 3 15 2 At3g44630 "disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein., closest Col-0 homolog to RPP1-WsB" 9 3 15 3 At3g47490 HNH endonuclease domain-containing protein contains Pfam domain PF01844: HNH endonuclease 9 3 15 4 At3g47550 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 9 3 15 5 At3g47700 chromosome structural maintenance protein-related contains weak similarity to RAD50-interacting protein 1 [Homo sapiens] gi|11967435|gb|AAG42101 9 3 15 6 At3g47760 "ABC transporter family protein probable transport protein ABC-C, Homo sapiens, PIR2:S71363" 9 3 15 7 At3g47920 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 9 3 15 8 At3g47980 "integral membrane HPP family protein contains Pfam domain, PF04982: HPP family" 9 3 15 9 At3g48150 "cell division cycle family protein / CDC family protein similar to cell division cycle protein 23 [Homo sapiens] GI:3283051, anaphase-promoting complex subunit 8 [Homo sapiens] GI:6180017; contains Pfam profile PF00515: TPR Domain" 9 3 15 10 At3g48185 expressed protein 9 3 15 11 At3g51080 "zinc finger (GATA type) family protein GATA transcription factor 3 - Arabidopsis thaliana, PIR:T05288" 9 3 15 12 At3g51120 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 9 3 15 13 At3g51310 vacuolar protein sorting-associated protein 35 family protein / VPS35 family protein similar to vacuolar protein sorting 35 [Mus musculus] GI:11875394; contains Pfam profile PF03635: Vacuolar protein sorting-associated protein 35 9 3 15 14 At3g51360 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 9 3 15 15 At3g51530 "F-box family protein various predicted proteins, Arabidopsis thaliana; contains Pfam profile PF00646: F-box domain" 9 3 15 16 At3g51590 "lipid transfer protein, putative similar to lipid transfer protein E2 precursor, Brassica napus, PIR:T07984 [GI:899224]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 9 3 15 17 At3g51750 expressed protein 9 3 15 18 At3g51790 cytochrome c biogenesis protein CcmE family contains Pfam profile: PF03100 cytochrome c-type biogenesis protein CcmE 9 3 15 19 At3g54280 "SNF2 domain-containing protein / helicase domain-containing protein similar to SP|O14981 TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo sapiens}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 9 3 15 20 At3g54320 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 9 3 15 21 At3g54490 "eukaryotic rpb5 RNA polymerase subunit family protein similar to SP|P19388 DNA-directed RNA polymerase II 23 kDa polypeptide (EC 2.7.7.6) {Homo sapiens}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 9 3 15 22 At3g54540 ABC transporter family protein similar to ABC50 GI:10863747 from [Rattus norvegicus] 9 3 15 23 At3g54720 "glutamate carboxypeptidase, putative (AMP1) identical to GI:15624092 glutamate carboxypeptidase {Arabidopsis thaliana}; ileal peptidase, Rattus norvegicus, EMBL:AF009921; identical to cDNA glutamate carboxypeptidase (AMP1) GI:15624091; contains Pfam profiles PF04389: Peptidase family M28, PF04253: Transferrin receptor-like dimerisation domain and PF02225 PA domain" 9 3 15 24 At3g54780 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|P79263 Inter-alpha-trypsin inhibitor heavy chain H4 precursor {Sus scrofa}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 9 3 15 25 At3g54920 "pectate lyase, putative / powdery mildew susceptibility protein (PMR6) identical to powdery mildew susceptibility protein [Arabidopsis thaliana] GI:22506901; similar to pectate lyase 2 GP:6606534 from [Musa acuminata]" 9 3 16 1 At3g54950 patatin-related low similarity to patatin [GI:169500][Solanum tuberosum]; contains Patatin domain PF01734 9 3 16 2 At3g57780 expressed protein 9 3 16 3 At3g57810 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 9 3 16 4 At3g57990 expressed protein 9 3 16 5 At3g58050 expressed protein 9 3 16 6 At3g58240 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 3 16 7 At3g58300 hypothetical protein 9 3 16 8 At3g58460 "rhomboid family protein / ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profiles PF01694: Rhomboid family, PF00627: UBA/TS-N domain" 9 3 16 9 At3g58520 expressed protein 9 3 16 10 At3g61240 "DEAD/DEAH box helicase, putative (RH12) identical to cDNA DEAD box RNA helicase, RH12 GI:3776000" 9 3 16 11 At3g61300 "C2 domain-containing protein anthranilate phosphoribosyltransferase (fragment) - Pisum sativum, PIR:T06460" 9 3 16 12 At3g61460 "zinc finger (C3HC4-type RING finger) family protein (BRH1) identical to BRH1 RING finger protein [Arabidopsis thaliana] GI:4689366; identical to cDNA BRH1 RING finger protein, GI:4689365" 9 3 16 13 At3g61520 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 3 16 14 At3g61680 lipase class 3 family protein contains Pfam profile PF01764: Lipase 9 3 16 15 At3g61720 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 9 3 16 16 At3g61870 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803), PIR:S75899" 9 3 16 17 At3g61930 expressed protein 9 3 16 18 At4g00880 auxin-responsive family protein similar to small auxin up RNA (GI:546362) {Arabidopsis thaliana} 9 3 16 19 At4g00920 COP1-interacting protein-related similar to COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646 9 3 16 20 At4g01060 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 9 3 16 21 At4g01120 G-box binding factor 2 (GBF2) identical to G-box binding factor 2 (GBF2) SP:P42775 from [Arabidopsis thaliana];contains Pfam profile: PF00170 bZIP transcription factor 9 3 16 22 At4g01265 raffinose synthase family protein / seed imbibition protein-related similar to seed imbibition protein [Arabidopsis thaliana] GI:10834552; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1 9 3 16 23 At4g01330 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 9 3 16 24 At4g01480 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase" 9 3 16 25 At4g01535 hypothetical protein 9 3 17 1 At4g04390 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 9 3 17 2 At4g04404 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 3 17 3 At4g04630 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 9 3 17 4 At4g04690 F-box family protein (FBX15) contains F-box domain PF:00646 9 3 17 5 At4g04850 "K+ efflux antiporter, putative (KEA3) similar to A. thaliana K+ antiporter KEA1, GenBank accession number AF003382; Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563" 9 3 17 6 At4g04900 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 9 3 17 7 At4g05030 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 9 3 17 8 At4g05090 "inositol monophosphatase family protein low similarity to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (DPNPase) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 9 3 17 9 At4g09800 40S ribosomal protein S18 (RPS18C) 9 3 17 10 At4g09860 hypothetical protein 9 3 17 11 At4g10000 expressed protein 9 3 17 12 At4g10060 "expressed protein contains Pfam domain PF04685: Protein of unknown function, DUF608" 9 3 17 13 At4g10200 hAT dimerisation domain-containing protein / transposase-related low similarity to transposase [Ipomoea purpurea] AB004906 GI:4063770 9 3 17 14 At4g10260 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 9 3 17 15 At4g10430 expressed protein 9 3 17 16 At4g10480 "nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative similar to alpha-NAC, non-muscle form [Mus musculus] GI:1666690; contains Pfam profiles PF01849: NAC domain, PF00627: UBA/TS-N domain" 9 3 17 17 At4g13260 flavin-containing monooxygenase / FMO (YUCCA2) identical to gi:16555354 9 3 17 18 At4g13310 "cytochrome P450 71A20, putative (CYP71A20) Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis thaliana]; similar to cytochrome P450 71A4, Solanum melongena, PIR2:S36805" 9 3 17 19 At4g13460 "SET domain-containing protein (SUVH9) identical to SUVH9 [Arabidopsis thaliana] GI:13517759; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH9 (SUVH9) GI:13517758" 9 3 17 20 At4g13520 expressed protein 9 3 17 21 At4g13670 peptidoglycan-binding domain-containing protein similar to spore cortex-lytic enzyme prepeptide (GI:1644192) [Bacillus cereus]; contains Pfam PF01471: Putative peptidoglycan binding domain; contains Pfam PF00684 : DnaJ central domain (4 repeats) 9 3 17 22 At4g13730 RabGAP/TBC domain-containing protein low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 9 3 17 23 At4g13850 glycine-rich RNA-binding protein (GRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabidopsis thaliana] GI:2826811 9 3 17 24 At4g13885 3'-5' exonuclease-related contains weak similarity to Pfam domain PF01612: 3'-5' exonuclease 9 3 17 25 At4g16260 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase, basic vacuolar isoform precursor SP:P52407 from [Hevea brasiliensis]" 9 3 18 1 At4g16310 "amine oxidase family protein / SWIRM domain-containing protein low similarity to polyamine oxidase isoform-1 [Homo sapiens] GI:14860862; contains Pfam profiles PF01593: amine oxidase flavin-containing, PF04433: SWIRM domain" 9 3 18 2 At4g16460 hypothetical protein 9 3 18 3 At4g16515 expressed protein 9 3 18 4 At4g16650 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator like protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 9 3 18 5 At4g16695 expressed protein 9 3 18 6 At4g16800 "enoyl-CoA hydratase, putative similar to AU-binding protein/Enoyl-CoA hydratase [Homo sapiens] GI:780241, [Mus musculus]GI:6840920; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 9 3 18 7 At4g16845 vernalization 2 protein (VRN2) identical to vernalization 2 protein [Arabidopsis thaliana] gi|16945788|gb|AAL32135 9 3 18 8 At4g19410 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 9 3 18 9 At4g19470 "disease resistance protein-related similar to disease resistance protein RPS4-Ler (GI:5823587)[Arabidopsis thaliana]; similar to TMV resistance protein N, Nicotiana glutinosa, PIR2:A54810; contains Pfam PF00560: Leucine Rich Repeat domains" 9 3 18 10 At4g19630 heat shock factor protein-related / heat shock transcription factor-related contains weak similarity to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (Swiss-Prot:P41151) [Arabidopsis thaliana] 9 3 18 11 At4g19680 "iron-responsive transporter (IRT2) member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 9 3 18 12 At4g19850 lectin-related low similarity to PP2 lectin polypeptide [Cucurbita maxima] GI:410437 9 3 18 13 At4g19900 "glycosyl transferase-related contains Pfam profiles PF01535: PPR repeat, PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif; several hypothetical proteins - Arabidopsis thaliana" 9 3 18 14 At4g20040 expressed protein C70DMY30S 9 3 18 15 At4g20095 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 9 3 18 16 At4g22890 expressed protein 9 3 18 17 At4g22940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 3 18 18 At4g23120 bromo-adjacent homology (BAH) domain-containing protein weak similarity to ES43 [Hordeum vulgare] GI:1345528; contains Pfam profile PF01426: BAH domain 9 3 18 19 At4g23170 protein kinase family protein contains Pfam PF01657: Domain of unknown function; similar to receptor-like protein kinase 5 (GI:13506747) {Arabidopsis thaliana}; similar to receptor-like protein kinase 4 (GI:13506745) [Arabidopsis thaliana] 9 3 18 20 At4g23320 protein kinase family protein contains Pfam PF00069: Protein kinase domain 9 3 18 21 At4g23370 "hypothetical protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 9 3 18 22 At4g23515 Toll-Interleukin-Resistance (TIR) domain-containing protein contains Pfam profile PF01582: TIR domain 9 3 18 23 At4g23570 "phosphatase-related low similarity to phosphoprotein phosphatase [Mus musculus] GI:567040; contains Pfam profiles PF00515: TPR Domain, PF05002: SGS domain, PF04969: CS domain" 9 3 18 24 At4g26140 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor GI:3869280 from [Carica papaya]" 9 3 18 25 At4g26190 expressed protein 9 3 19 1 At4g26350 F-box family protein contains F-box domain Pfam:PF00646 9 3 19 2 At4g26400 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 9 3 19 3 At4g26540 protein kinase family protein Three false introns were added with non-consensus splice sites to circumenvent frameshifts likely due to sequencing errors; this is extremely unusual and is under investigation. 9 3 19 4 At4g26570 calcineurin B-like protein 3 (CBL3) identical to calcineurin B-like protein 3 (GI:22136404) [Arabidopsis thaliana] 9 3 19 5 At4g26720 serine/threonine protein phosphatase PP-X isozyme 1 (PPX1) identical to SP|P48529 Serine/threonine protein phosphatase PP-X isozyme 1 (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 9 3 19 6 At4g26780 co-chaperone grpE family protein similar to chaperone GrpE type 2 [Nicotiana tabacum] GI:3851640; contains Pfam profile PF01025: co-chaperone GrpE 9 3 19 7 At4g29360 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 9 3 19 8 At4g29420 F-box family protein contains F-box Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 9 3 19 9 At4g29600 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 7 (CDA7) [Arabidopsis thaliana] GI:3818574, cytidine deaminase homolog DesC [Arabidopsis thaliana] GI:4836445; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 9 3 19 10 At4g29660 "expressed protein predicted proteins, Arabidopsis thaliana" 9 3 19 11 At4g29800 patatin-related low similarity to patatin precursor [Solanum brevidens][GI:563125]; contains Patatin domain PF01743 9 3 19 12 At4g29840 "threonine synthase, chloroplast identical to SP|Q9S7B5 Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}" 9 3 19 13 At4g30010 expressed protein 9 3 19 14 At4g30070 "plant defensin-fusion protein, putative contains a C-terminal plant defensin domain, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)" 9 3 19 15 At4g32560 paramyosin-related contains weak similarity to Paramyosin (Swiss-Prot:P10567) [Caenorhabditis elegans] 9 3 19 16 At4g32590 ferredoxin-related contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domain 9 3 19 17 At4g32780 expressed protein 9 3 19 18 At4g32830 "protein kinase, putative similar to protein kinase p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914; contains protein kinase domain, Pfam:PF00069" 9 3 19 19 At4g32940 "vacuolar processing enzyme gamma / gamma-VPE nearly identical to SP|Q39119 Vacuolar processing enzyme, gamma-isozyme precursor (EC 3.4.22.-) (Gamma-VPE) {Arabidopsis thaliana}" 9 3 19 20 At4g33000 calcineurin B-like protein 10 (CBL10) identical to calcineurin B-like protein 10 [Arabidopsis thaliana] GI:29150248 9 3 19 21 At4g33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme identical to lysine-ketoglutarate reductase/saccharopine dehydrogenase GI:2052508 from [Arabidopsis thaliana] 9 3 19 22 At4g33220 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 9 3 19 23 AT5G57480 PC-1 C04 9 3 19 24 3XSSC PC-1 C16 9 3 19 25 AT1G29930 PC-1 G04 9 3 20 1 3XSSC PC-1 G16 9 3 20 2 AT3G44150 PC-1 K04 9 3 20 3 3XSSC PC-1 K16 9 3 20 4 AT4G00810 PC-1 O04 9 3 20 5 3XSSC PC-1 O16 9 3 20 6 At4g35790 phospholipase D delta / PLD delta (PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0 from [Arabidopsis thaliana]; supporting cDNA gi|11761141|dbj|AB031047.1| 9 3 20 7 At4g35840 "zinc finger (C3HC4-type RING finger) family protein contains a TG non-consensus donor splice site at exon 2; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 9 3 20 8 At4g35990 hypothetical protein 9 3 20 9 At4g36050 endonuclease/exonuclease/phosphatase family protein 9 3 20 10 At4g36180 "leucine-rich repeat family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 9 3 20 11 At4g36220 cytochrome P450 84A1 (CYP84A1) / ferulate-5-hydroxylase (FAH1) identical to Cytochrome P450 84A1 (Ferulate-5-hydroxylase) (SP|Q42600) [Arabidopsis thaliana] 9 3 20 12 At4g36420 ribosomal protein L12 family protein 9 3 20 13 At4g36480 "aminotransferase class I and II family protein similar to Serine palmitoyltransferase 1 (EC 2.3.1.50) from Homo sapiens [SP|O15269], Mus musculus [SP|O35704], Cricetulus griseus [SP|O54695]" 9 3 20 14 At4g39130 "dehydrin family protein contains Pfam domain, PF00257: Dehydrin" 9 3 20 15 At4g39190 expressed protein ; expression supported by MPSS 9 3 20 16 At4g39300 expressed protein 9 3 20 17 At4g39350 "cellulose synthase, catalytic subunit (Ath-A) identical to gi:2827141" 9 3 20 18 At4g39500 "cytochrome P450, putative simialrity to cytochrome P450 CYP86A1, Arabidopsis thaliana, EMBL:X90458" 9 3 20 19 At4g39550 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 9 3 20 20 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 9 3 20 21 At4g39750 F-box family protein-related contains weak similarity to F-box domain Pfam:PF00646 9 3 20 22 At5g03270 expressed protein contains Pfam profile PF03641: decarboxylase family protein 9 3 20 23 At5g03330 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 9 3 20 24 At5g03460 expressed protein 9 3 20 25 At5g03520 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:871508 from [Pisum sativum]" 9 3 21 1 At5g03680 "trihelix DNA-binding protein, putative similar to DNA-binding protein DF1 [Pisum sativum] GI:13646986" 9 3 21 2 At5g03740 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 3 21 3 At5g03910 "ABC transporter family protein ABC-type transport protein sll1276, Synechocystis sp., PIR:S77239" 9 3 21 4 At5g03970 "F-box family protein predicted proteins, Arabidopsis thaliana" 9 3 21 5 At5g06550 transcription factor jumonji (jmjC) domain-containing protein contains Pfam PF00646: F-box domain; contains Pfam PF02373: jmjC domain; similar to apoptotic cell clearance receptor PtdSerR (GI:11037740) [Mus musculus] 9 3 21 6 At5g06610 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 9 3 21 7 At5g06780 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 9 3 21 8 At5g06830 expressed protein contains Pfam profile: PF05600 protein of unknown function (DUF773) 9 3 21 9 At5g06990 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617; expression supported by MPSS" 9 3 21 10 At5g07050 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 9 3 21 11 At5g07210 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 9 3 21 12 At5g07260 homeobox protein-related contains weak similarity to Homeobox protein FWA (Swiss-Prot:Q9FVI6) [Arabidopsis thaliana] 9 3 21 13 At5g10350 "polyadenylate-binding protein family protein / PABP family protein contains weak similarity to poly(A) binding protein II from [Mus musculus] GI:2351846, [Xenopus laevis] GI:11527140; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 9 3 21 14 At5g10410 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 9 3 21 15 At5g10580 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 9 3 21 16 At5g10625 expressed protein 9 3 21 17 At5g10770 "chloroplast nucleoid DNA-binding protein, putative similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 9 3 21 18 At5g10830 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 9 3 21 19 At5g11010 pre-mRNA cleavage complex-related low similarity to SP|Q92989 Pre-mRNA cleavage complex II protein Clp1 {Homo sapiens} 9 3 21 20 At5g11050 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA binding domain; identical to cDNA putative transcription factor MYB64 (MYB64) GI:15375309 9 3 21 21 At5g14180 lipase family protein similar to SP|Q64194 Lysosomal acid lipase/cholesteryl ester hydrolase precursor (EC 3.1.1.13) {Rattus norvegicus}; contains Pfam profile PF04083: ab-hydrolase associated lipase region 9 3 21 22 At5g14250 "COP9 signalosome complex subunit 3 / CSN complex subunit 3 (CSN3) / FUSCA protein (FUS11) CSN3, FUS11; identical to COP9 signalosome subunit 3 GI:14388969 [Arabidopsis thaliana]; identical to cDNA CSN complex subunit 3 (CSN3) GI:18056656; contains Pfam profile PF01399: PCI domain" 9 3 21 23 At5g14420 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 9 3 21 24 At5g14480 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 9 3 21 25 At5g14620 cytosine methyltransferase (DRM2) identical to cytosine methyltransferase GI:7658293 from [Arabidopsis thaliana] 9 3 22 1 At5g14690 "expressed protein predicted protein, Arabidopsis thaliana" 9 3 22 2 At5g14870 "cyclic nucleotide-regulated ion channel, putative (CNGC18) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana]" 9 3 22 3 At5g14930 leaf senescence-associated protein (SAG101) nearly identical to leaf senescence-associated gene SAG101 (putative acyl hydrolase) [Arabidopsis thaliana] GI:8699168; contains Pfam profile PF01764: Lipase 9 3 22 4 At5g17600 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 3 22 5 At5g17660 expressed protein contains Pfam profile PF02390: Putative methyltransferase 9 3 22 6 At5g17800 myb family transcription factor (MYB56) identical to putative transcription factor (MYB56) GI:3941473 from [Arabidopsis thaliana] 9 3 22 7 At5g17860 "cation exchanger, putative (CAX7) contains similarity to SWISS-PROT:Q9HC58 NKX3_HUMAN Sodium/potassium/calcium exchanger 3 precursor {Homo sapiens}; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 9 3 22 8 At5g18050 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 9 3 22 9 At5g18100 superoxide dismutase [Cu-Zn] / copper/zinc superoxide dismutase (CSD3) identical to copper/zinc superoxide dismutase GI:3273755 9 3 22 10 At5g18250 expressed protein similar to unknown protein (dbj|BAA90342.1) 9 3 22 11 At5g18290 major intrinsic protein-related / MIP-related contains weak similarity to Pfam profile: MIP PF00230; annotated based on segmental duplication 9 3 22 12 At5g20890 "chaperonin, putative similar to SWISS-PROT:P78371- T-complex protein 1, beta subunit (TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 9 3 22 13 At5g20935 expressed protein 9 3 22 14 At5g21100 "L-ascorbate oxidase, putative similar to L-ascorbate oxidase [Precursor] SP:Q40588 from [Nicotiana tabacum]" 9 3 22 15 At5g21140 expressed protein 9 3 22 16 At5g21990 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 9 3 22 17 At5g22035 ubiquitin-specific protease-related contains weak similarity to ubiquitin-specific protease; UBP5 [Arabidopsis thaliana] gi|6648604|gb|AAF21246 9 3 22 18 At5g22170 hypothetical protein 9 3 22 19 At5g22220 E2F transcription factor-1 (E2F1) identical to E2F transcription factor-1 E2F1 [Arabidopsis thaliana] gi|10443849|gb|AAG17608 9 3 22 20 At5g24870 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 9 3 22 21 At5g24920 expressed protein ; expression supported by MPSS 9 3 22 22 At5g25100 "endomembrane protein 70, putative TM4 family;" 9 3 22 23 At5g25160 "zinc finger (C2H2 type) family protein (ZFP3) identical to zinc finger protein, ZFP3 gi|790677|gb|AAA87299; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 3 22 24 At5g25320 ACT domain-containing protein contains Pfam ACT domain PF01842 9 3 22 25 At5g25380 "cyclin 3a (CYC3a) nearly identical to cyclin 3a [Arabidopsis thaliana] GI:509425; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 9 3 23 1 At5g25480 C-5 cytosine-specific DNA methylase family protein contains Pfam profile PF00145: C-5 cytosine-specific DNA methylase 9 3 23 2 At5g25520 transcription elongation factor-related contains weak similarity to transcription elongation factors 9 3 23 3 At5g28530 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 9 3 23 4 At5g28600 hypothetical protein 9 3 23 5 At5g28770 bZIP transcription factor family protein similar to seed storage protein opaque-2(bZIP family)GI:168428 from Zea mays; contains Pfam profile PF00170: bZIP transcription factor; identical to cDNA bZIP protein BZO2H3 GI:10954098 9 3 23 6 At5g28810 hypothetical protein 9 3 23 7 At5g28990 hypothetical protein 9 3 23 8 At5g29070 expressed protein 9 3 23 9 At5g30520 hypothetical protein 9 3 23 10 At5g32161 hypothetical protein 9 3 23 11 At5g37540 "aspartyl protease family protein weak similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site; contains 1 predicted transmembrane domain" 9 3 23 12 At5g37600 "glutamine synthetase, putative similar to glutamine synthetase, cytosolic isozyme (Glutamate-- ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899" 9 3 23 13 At5g37790 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 3 23 14 At5g37850 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 9 3 23 15 At5g38030 "MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family; putative multidrug efflux protein NorM - Vibrio parahaemolyticus, EMBL:AB010463" 9 3 23 16 At5g38080 hypothetical protein 9 3 23 17 At5g38250 "serine/threonine protein kinase, putative similar to receptor serine/threonine kinase PR55K gi|1235680|gb|AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 9 3 23 18 At5g38310 hypothetical protein 9 3 23 19 At5g41140 expressed protein 9 3 23 20 At5g41200 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 9 3 23 21 At5g41380 hypothetical protein 9 3 23 22 At5g41450 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 3 23 23 At5g41620 expressed protein weak similarity to microtubule binding protein D-CLIP-190 (GI:2773363) [Drosophila melanogaster]; weak similarity to Synaptonemal complex protein 1 (SCP-1 protein) (Swiss-Prot:Q15431) [Homo sapiens]; weak similarity to DNA double-strand break repair rad50 ATPase. (Swiss-Prot:P58301) [Pyrococcus furiosus] 9 3 23 24 At5g41680 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to receptor-like protein kinase (GI:4008006) [Arabidopsis thaliana]; similar to receptor-like kinase RHG1 (GI:21239380) (GI:21239382) [Glycine max]" 9 3 23 25 At5g41810 expressed protein 9 3 24 1 At5g41870 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase PG1 [Glycine max] GI:5669846; contains PF00295: Glycosyl hydrolases family 28 9 3 24 2 At5g44520 ribose 5-phosphate isomerase-related low similarity to SP|P47968 Ribose 5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase) {Mus musculus} 9 3 24 3 At5g44570 hypothetical protein 9 3 24 4 At5g44720 "molybdenum cofactor sulfurase family protein weak similarity to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains Pfam profiles PF03476: MOSC N-terminal beta barrel domain, PF03473: MOSC domain" 9 3 24 5 At5g44740 UMUC-like DNA repair family protein low similarity to DNA polymerase eta [Homo sapiens] GI:11463971; contains Pfam profile PF00817: ImpB/MucB/SamB family 9 3 24 6 At5g44920 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 9 3 24 7 At5g44960 F-box family protein contains F-box domain Pfam:PF00646 9 3 24 8 At5g45110 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 9 3 24 9 At5g45160 root hair defective 3 GTP-binding (RHD3) family protein contains Pfam profile: PF05879 root hair defective 3 GTP-binding protein (RHD3) family 9 3 24 10 At5g47710 C2 domain-containing protein contains similarity to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain 9 3 24 11 At5g47760 "phosphoglycolate phosphatase, putative similar to phosphoglycolate phosphatase precursor [Chlamydomonas reinhardtii] GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 9 3 24 12 At5g47910 respiratory burst oxidase protein D (RbohD) / NADPH oxidase identical to respiratory burst oxidase protein D from Arabidopsis thaliana [gi:3242789] 9 3 24 13 At5g47970 nitrogen regulation family protein strong similarity to unknown protein (emb|CAB87804.1) ; contains Pfam domain PF01207: Dihydrouridine synthase (Dus); similar to (SP:P45672) NIFR3-like protein (SP:P45672) [Azospirillum brasilense] 9 3 24 14 At5g48150 phytochrome A signal transduction 1 (PAT1) 9 3 24 15 At5g48205 hypothetical protein 9 3 24 16 At5g48370 "thioesterase family protein similar to SP|Q9R0X4 48 kDa acyl-CoA thioester hydrolase, mitochondrial precursor (EC 3.1.2.-) {Mus musculus}; contains Pfam profile PF03061: thioesterase family protein" 9 3 24 17 At5g48400 "glutamate receptor family protein (GLR1.2) plant glutamate receptor family, PMID:11379626" 9 3 24 18 At5g51105 expressed protein 9 3 24 19 At5g51160 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 3 24 20 At5g51300 splicing factor-related contains similarity to SF1 protein [Drosophila melanogaster] GI:6687400 9 3 24 21 At5g51350 "leucine-rich repeat transmembrane protein kinase, putative " 9 3 24 22 At5g51520 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q42534; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 9 3 24 23 At5g51580 expressed protein 9 3 24 24 At5g51720 expressed protein 9 3 24 25 At5g51780 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 3 25 1 At5g54530 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 9 3 25 2 At5g54585 expressed protein 9 3 25 3 At5g54720 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 3 25 4 At5g54770 "thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) identical to SP|Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana}" 9 3 25 5 At5g54920 expressed protein 9 3 25 6 At5g54960 "pyruvate decarboxylase, putative strong similarity to pyruvate decarboxylase 1 [Vitis vinifera] GI:10732644; contains InterPro entry IPR000399: Pyruvate decarboxylase" 9 3 25 7 At5g55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam domain PF01805: Surp module 9 3 25 8 At5g55140 ribosomal protein L30 family protein contains similarity to 50S ribosomal protein L30 9 3 25 9 At5g57840 transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus [gi:2239091] 9 3 25 10 At5g57870 "eukaryotic translation initiation factor 4F, putative / eIF-4F, putative similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain" 9 3 25 11 At5g58030 "transport protein particle (TRAPP) component Bet3 family protein very strong similarity to SPP30 (Solanum pollinated pistil) [Solanum chacoense] GI:4959712; contains Pfam profile PF04051: Transport protein particle (TRAPP) component, Bet3" 9 3 25 12 At5g58090 glycosyl hydrolase family 17 protein similar to 3-glucanase GI:18483232 from [Sorghum bicolor] 9 3 25 13 At5g58240 "bis(5'-adenosyl)-triphosphatase, putative similar to bis(5'-adenosyl)-triphosphatase (Diadenosine 5',5'''- P1,P3-triphosphate hydrolase, Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE, Fragile histidine triad protein) [Homo sapiens] Swiss-Prot:P49789" 9 3 25 14 At5g58290 26S proteasome AAA-ATPase subunit (RPT3) identical to 26S proteasome AAA-ATPase subunit RPT3 GI:6652882 from [Arabidopsis thaliana] 9 3 25 15 At5g58420 "40S ribosomal protein S4 (RPS4D) ribosomal protein S4, Arabidopsis thaliana, PIR:T48480" 9 3 25 16 At5g58480 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 9 3 25 17 At5g61070 histone deacetylase family protein (HDA18) identical to HDA18 [Arabidopsis thaliana] GI:21105769; similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 9 3 25 18 At5g61130 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 9 3 25 19 At5g61290 flavin-containing monooxygenase family protein / FMO family protein low similarity to FMO3 from Homo sapiens [SP|P31513]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like; supported by full-length cDNA Ceres:14492 9 3 25 20 At5g61330 rRNA processing protein-related contains weak similarity to rRNA processing protein EBP2 (EBNA1-binding protein homolog) (Swiss-Prot:P36049) [Saccharomyces cerevisiae] 9 3 25 21 At5g61490 hypothetical protein 9 3 25 22 At5g61530 "small G protein family protein / RhoGAP family protein contains Pfam domain, PF00620: RhoGAP domain" 9 3 25 23 At5g61670 expressed protein 9 3 25 24 At5g61730 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter 9 3 25 25 At5g64420 DNA polymerase V family contains Pfam domain PF04931: DNA polymerase V 9 3 26 1 At5g64470 expressed protein similar to unknown protein (gb|AAD15463.1) 9 3 26 2 At5g64610 "histone acetyltransferase, putative similar to histone acetyltransferase [Homo sapiens] gi|8317213|gb|AAF72665" 9 3 26 3 At5g64650 ribosomal protein L17 family protein contains Pfam profile: PF01196 ribosomal protein L17 9 3 26 4 At5g64800 "CLE21, putative CLAVATA3/ESR-Related 21 (CLE21)" 9 3 26 5 At5g64820 hypothetical protein 9 3 26 6 At5g64990 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:550072 from [Homo sapiens]" 9 3 26 7 At5g65010 asparagine synthetase 2 (ASN2) identical to asparagine synthetase (ASN2) [Arabidopsis thaliana] GI:3859536 9 3 26 8 At5g67550 expressed protein 9 3 26 9 At5g67610 expressed protein 9 3 26 10 At3g26530 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g21020, At1g08760, At1g08740, At2g29240, At1g35650" 9 3 26 11 At5g50620 hypothetical protein 9 3 26 12 ath-MIR160c miRNA gene Arabidopsis thaliana miR160c stem-loop 9 3 26 13 ath-MIR169f miRNA gene Arabidopsis thaliana miR169f stem-loop 9 3 26 14 ath-MIR394b miRNA gene Arabidopsis thaliana miR394b stem-loop 9 3 26 15 ath-MIR399e miRNA gene Arabidopsis thaliana miR399e stem-loop 9 3 26 16 At3g43860 glycosyl hydrolase family 9 protein similar to cellulase GI:575404 from [Sambucus nigra]. 9 3 26 17 At3g43920 "ribonuclease III family protein similar to RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF02170: PAZ domain, PF00636: RNase3 domain" 9 3 26 18 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 9 3 26 19 At3g44150 expressed protein hypothetical proteins - Arabidopsis thaliana 9 3 26 20 At3g44330 expressed protein 9 3 26 21 At3g44400 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 3 26 22 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 9 3 26 23 At3g44630 "disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein., closest Col-0 homolog to RPP1-WsB" 9 3 26 24 Blank Blank 9 3 26 25 Blank Blank 9 4 1 1 atc01 Randomly generated negative control 9 4 1 2 atc07 Randomly generated negative control 9 4 1 3 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 9 4 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 9 4 1 5 Alien3 Control: Stratagene Spotreport Alien Oligo 9 4 1 6 Alien9 Control: Stratagene Spotreport Alien Oligo 9 4 1 7 atc05 Randomly generated negative control 9 4 1 8 atc11 Randomly generated negative control 9 4 1 9 At1g02816 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 9 4 1 10 At1g02850 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 9 4 1 11 At1g02960 expressed protein 9 4 1 12 At1g02990 expressed protein similar to mature-parasite-infected erythrocyte surface antigen (GI:160409) {Plasmodium falciparum} 9 4 1 13 At1g03106 expressed protein 9 4 1 14 At1g03160 GTP-binding protein-related contains TIGRFAM TIGR00650: GTP-binding conserved hypothetical protein domain; contains TIGRFAM TIGR00231: small GTP-binding protein domain; similar to mitofusin 1 precursor (GI:12744896) [Homo sapiens] 9 4 1 15 At1g03340 expressed protein similar to hypothetical protein GB:AAC79114 9 4 1 16 At1g03400 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); similar to ESTs emb|Z34690, gb|T04168, gb|H37738, gb|T76913, gb|T43801, amd gb|T21964" 9 4 1 17 At1g06060 RanBPM-related similar to RANBPM {GI:13194576)[Homo sapiens] 9 4 1 18 At1g06120 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase GB:BAA25180 GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported by cDNA:gi_12083275_gb_AF332434.1_AF332434 9 4 1 19 At1g06240 "expressed protein contains Pfam domain, PF04305: Protein of unknown function (DUF455)" 9 4 1 20 At1g06310 "acyl-CoA oxidase, putative strong similarity to acyl-CoA oxidase ACX3 GI:8163758 from [Arabidopsis thaliana]" 9 4 1 21 At1g06475 expressed protein 9 4 1 22 At1g06540 expressed protein 9 4 1 23 At1g06710 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 9 4 1 24 At1g06770 zinc finger (C3HC4-type RING finger) family protein 9 4 1 25 At1g09260 DNAJ heat shock N-terminal domain-containing protein low similarity to similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 9 4 2 1 At1g09310 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 9 4 2 2 At1g09480 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 9 4 2 3 At1g09510 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 9 4 2 4 At1g09660 "KH domain-containing quaking protein, putative similar to GB:AAC67357" 9 4 2 5 At1g09710 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 9 4 2 6 At1g09850 "cysteine protease, papain-like (XBCP3) identical to papain-like cysteine peptidase XBCP3 GI:14600257 from [Arabidopsis thaliana]; contains Pfam profiles PF00112: Papain family cysteine protease and PF00396: Granulin" 9 4 2 7 At1g09910 expressed protein 9 4 2 8 At1g12480 C4-dicarboxylate transporter/malic acid transport family protein contains Pfam profile PF03595: C4-dicarboxylate transporter/malic acid transport protein 9 4 2 9 At1g12550 "oxidoreductase family protein similar to glyoxylate reductase from Homo sapiens (gi:6002730); contains Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826" 9 4 2 10 At1g12740 cytochrome P450 family protein similar to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana] 9 4 2 11 At1g12800 "S1 RNA-binding domain-containing protein contains Pfam domain, PF00575: S1 RNA binding domain" 9 4 2 12 At1g12960 60S ribosomal protein L27A (RPL27aA) similar to GB:BAA96068 from [Panax ginseng] 9 4 2 13 At1g13030 sphere organelles protein-related contains weak similarity to Swiss-Prot:Q09003 sphere organelles protein SPH-1 (Sphere protein 1) [Xenopus laevis] 9 4 2 14 At1g13195 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 9 4 2 15 At1g13245 expressed protein 9 4 2 16 At1g15900 hypothetical protein 9 4 2 17 At1g15930 40S ribosomal protein S12 (RPS12A) similar to 40S ribosomal protein S12 GI:4263712 from [Arabidopsis thaliana] 9 4 2 18 At1g16090 wall-associated kinase-related contains similarity to wall-associated kinase 2 GI:4826399 from [Arabidopsis thaliana]; similar to wall-associated kinase 1 (GI:3549626) [Arabidopsis thaliana]; contains one transmembrane domain 9 4 2 19 At1g16160 protein kinase family protein contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana] 9 4 2 20 At1g16340 "2-dehydro-3-deoxyphosphooctonate aldolase, putative / phospho-2-dehydro-3-deoxyoctonate aldolase, putative / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase, putative similar to Swiss-Prot:Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase (EC 4.1.2.16) (Phospho-2- dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) [Arabidopsis thaliana]" 9 4 2 21 At1g16400 cytochrome P450 family protein similar to gb|AF069494 cytochrome P450 from Sinapis alba and is a member of the PF|00067 Cytochrome P450 family; identical to cytochrome P450 CYP79F2 (CYP79F2) GI:10946207 9 4 2 22 At1g16560 Per1-like family protein contains Pfam profile PF04080: Per1-like 9 4 2 23 At1g16610 "arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana]" 9 4 2 24 At1g19397 expressed protein 9 4 2 25 At1g19460 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 9 4 3 1 At1g19640 S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase (JMT) nearly identical to gi:13676829 9 4 3 2 At1g19700 homeobox-leucine zipper family protein similar to BEL1-like homeodomain 1 (GI:13877517) [Arabidopsis thaliana]; similar to homeodomain protein GI:7239157 from (Malus domestica); contains weak hit to Pfam profile PF00046: Homeobox domain 9 4 3 3 At1g19890 "histone H3, putative similar to histone H3 from Chlamydomonas reinhardtii GI:571470, Volvox carteri SP|P08437, histone H3.2 minor from Lolium temulentum SP|P11105; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 9 4 3 4 At1g19950 "abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 9 4 3 5 At1g20140 "E3 ubiquitin ligase SCF complex subunit, putative similar to Skp1 GI:4959710 from [Medicago sativa]" 9 4 3 6 At1g20220 expressed protein 9 4 3 7 At1g22930 T-complex protein 11 contains Pfam PF05794: T-complex protein 11 9 4 3 8 At1g22985 "AP2 domain-containing transcription factor, putative " 9 4 3 9 At1g23120 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060]; Location of EST gb|T88564 ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 9 4 3 10 At1g23180 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 9 4 3 11 At1g23330 expressed protein 9 4 3 12 At1g23380 "homeobox transcription factor (KNAT6) nearly identical to homeodomain transcription factor KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana], homeodomain transcription factor KNAT6 (KNAT6S) [Arabidopsis thaliana] GI:15991300" 9 4 3 13 At1g23510 expressed protein 9 4 3 14 At1g23560 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 9 4 3 15 At1g27280 paired amphipathic helix repeat-containing protein similar to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 9 4 3 16 At1g27340 "F-box family protein contains Pfam PF00646: F-box domain; similar to fim protein; similar to ESTs gb|T42445, gb|T76780, gb|AA650733, and emb|Z17748" 9 4 3 17 At1g27450 adenine phosphoribosyltransferase 1 (APT1) nearly identical to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana} 9 4 3 18 At1g27500 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515 TPR Domain 9 4 3 19 At1g27660 ethylene-responsive protein -related contains similarity to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413 9 4 3 20 At1g27710 glycine-rich protein 9 4 3 21 At1g27880 "ATP-dependent DNA helicase, putative similar to SP|O94761 ATP-dependent DNA helicase Q4 (RecQ4) {Homo sapiens}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 9 4 3 22 At1g27940 "multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein atpgp1 GI:3849833 from [Arabidopsis thaliana]" 9 4 3 23 At1g30845 expressed protein 9 4 3 24 At1g30900 "vacuolar sorting receptor, putative similar to BP-80 vacuolar sorting receptor [Pisum sativum] GI:1737222" 9 4 3 25 At1g31120 "potassium transporter family protein similar to HAK2 [Hordeum vulgare] GI:7108599, potassium transporter [Arabidopsis thaliana] gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 9 4 4 1 At1g31170 parB-like nuclease domain-containing protein contains Pfam profile PF02195: ParB-like nuclease domain 9 4 4 2 At1g31340 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 9 4 4 3 At1g31400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 9 4 4 4 At1g31600 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam profiles PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 9 4 4 5 At1g31670 "copper amine oxidase, putative similar to amine oxidase [copper-containing] precursor [Pisum sativum] SWISS-PROT:Q43077" 9 4 4 6 At1g34730 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g27790" 9 4 4 7 At1g34770 MAGE-8 antigen-related contains weak similarity to Swiss-Prot:P43361 melanoma-associated antigen 8 (MAGE-8 antigen) [Homo sapiens] 9 4 4 8 At1g35220 expressed protein 9 4 4 9 At1g35310 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 9 4 4 10 At1g35513 "isochorismate synthase-related / isochirismate mutase-related similar to SP|Q9S7H8 Isochorismate synthase 1, chloroplast precursor (EC 5.4.99.6) (IcsI) (Isochorismate mutase) (Salicylic acid induction deficient 2) (Sid2) (Enhanced disease susceptibility 16) (Eds16) {Arabidopsis thaliana}" 9 4 4 11 At1g35560 "TCP family transcription factor, putative similar to PCF2 (GI:2580440) and PCF1 (GI:2580438) [Oryza sativa]" 9 4 4 12 At1g35750 pumilio/Puf RNA-binding domain-containing protein 9 4 4 13 At1g35860 chloroplast outer membrane protein-related similar to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607 9 4 4 14 At1g47420 expressed protein identical to hypothetical protein GB:AAD46040 GI:5668814 from [Arabidopsis thaliana] 9 4 4 15 At1g47490 "RNA-binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nicotiana tabacum]" 9 4 4 16 At1g47660 hypothetical protein 9 4 4 17 At1g47730 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; identical to hypothetical protein GB:AAD46016 GI:5668790 from (Arabidopsis thaliana) 9 4 4 18 At1g47870 E2F transcription factor-2 (E2F2) / transcription factor E2Fc (E2Fc) identical to transcription factor E2Fc [Arabidopsis thaliana] GI:19578311; contains Pfam profile PF02319: Transcription factor E2F/dimerisation partner; identical to cDNA E2F transcription factor-2 E2F2 GI:10443850 9 4 4 19 At1g47940 hypothetical protein 9 4 4 20 At1g48110 expressed protein contains Pfam profile PF04146: YT521-B-like family 9 4 4 21 At1g48160 "signal recognition particle 19 kDa protein, putative / SRP19, putative similar to signal recognition particle 19 kDa protein subunit SRP19 GI:624221 [Oryza sativa (japonica cultivar-group)]; contains Pfam profile: PF01922 SRP19 protein" 9 4 4 22 At1g51220 "zinc finger (C2H2 type) protein (WIP5) identical to WIP5 protein [Arabidopsis thaliana] gi|18376498|emb|CAC86167; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 4 4 23 At1g51280 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 9 4 4 24 At1g51420 "sucrose-phosphatase, putative similar to sucrose-phosphatase (SPP1) [Arabidopsis thaliana] GI:11127757; contains Pfam profile PF05116: Sucrose-6F-phosphate phosphohydrolase" 9 4 4 25 At1g51480 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 9 4 5 1 At1g51620 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 4 5 2 At1g51680 4-coumarate--CoA ligase 1 / 4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana} 9 4 5 3 At1g51810 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase GI:1321686 from (Arabidopsis thaliana); contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 9 4 5 4 At1g51870 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 9 4 5 5 At1g54490 5'-3' exoribonuclease (XRN4) identical to XRN4 [Arabidopsis thaliana] GI:11875626; contains Pfam domain PF03159: Putative 5'-3' exonuclease domain 9 4 5 6 At1g54550 F-box family protein contains Pfam:PF00646 F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 9 4 5 7 At1g54730 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 9 4 5 8 At1g54790 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 9 4 5 9 At1g54940 "glycogenin glucosyltransferase (glycogenin)-related contains similarity to glycogenin-1 from Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730], Homo sapiens [SP|P46976]" 9 4 5 10 At1g54990 expressed protein 9 4 5 11 At1g55180 "phospholipase D, putative (PLDEPSILON) identical to SP|Q9C888 Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD epsilon) (PLDalpha3) {Arabidopsis thaliana}; similar to GI:6573119 from [Lycopersicon esculentum] (Plant Physiol. 122 (1), 292 (2000))" 9 4 5 12 At1g55240 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 9 4 5 13 At1g59710 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 9 4 5 14 At1g59750 auxin-responsive factor (ARF1) identical to auxin response factor 1 GI:2245378 from [Arabidopsis thaliana] 9 4 5 15 At1g59870 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza] 9 4 5 16 At1g59930 hypothetical protein 9 4 5 17 At1g60095 jacalin lectin family protein contains similarity to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; 9 4 5 18 At1g60180 hypothetical protein similar to hypothetical protein GI:6017113 from [Arabidopsis thaliana] 9 4 5 19 At1g60420 DC1 domain-containing protein contains Pfam domain PF03107: DC1 domain 9 4 5 20 At1g60490 phosphatidylinositol 3-kinase (PI3K) identical to SP|P42339 Phosphatidylinositol 3-kinase (EC 2.7.1.137) (PI3-kinase) (PtdIns-3- kinase) (PI3K) {Arabidopsis thaliana} 9 4 5 21 At1g63310 expressed protein similar to unknown protein GB:AAC69930 from [Arabidopsis thaliana] 9 4 5 22 At1g63370 flavin-containing monooxygenase family protein / FMO family protein similar to FMO5 from Cavia porcellus [SP|P49109]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like 9 4 5 23 At1g63560 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function DUF26; weak similarity to receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] 9 4 5 24 At1g63610 expressed protein 9 4 5 25 At1g63740 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 4 6 1 At1g63800 "ubiquitin-conjugating enzyme 5 (UBC5) E2; identical to gi:431269, SP:P42749" 9 4 6 2 At1g63940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase GB:AAD28178 [Brassica juncea]" 9 4 6 3 At1g63980 D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain 9 4 6 4 At1g66780 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 9 4 6 5 At1g66840 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS 9 4 6 6 At1g67020 hypothetical protein 9 4 6 7 At1g67060 expressed protein 9 4 6 8 At1g67220 "zinc finger protein-related similar to SP|Q09472 E1A-associated protein p300 {Homo sapiens}, SP|Q92793 CREB-binding protein {Homo sapiens}; contains Pfam profiles PF00569: Zinc finger ZZ type, PF00628: PHD-finger, PF02135: TAZ zinc finger" 9 4 6 9 At1g67300 "hexose transporter, putative similar to hexose transporters from Solanum tuberosum [GI:8347246], Nicotiana tabacum [GI:8347244], Arabidopsis thaliana [GI:8347250]; contains Pfam profile PF00083: major facilitator superfamily protein" 9 4 6 10 At1g67455 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 9 4 6 11 At1g67510 "leucine-rich repeat family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 9 4 6 12 At1g70150 zinc finger (MYND type) family protein contains Pfam profile PF01753: MYND finger 9 4 6 13 At1g70190 ribosomal protein L12 family protein contains similarity to ribosomal protein GI:7270590 from [Arabidopsis thaliana] 9 4 6 14 At1g70380 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 9 4 6 15 At1g70420 expressed protein 9 4 6 16 At1g70560 "alliinase C-terminal domain-containing protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 9 4 6 17 At1g70600 60S ribosomal protein L27A (RPL27aC) identical to 60S ribosomal protein L27A GB:P49637 [Arabidopsis thaliana] 9 4 6 18 At1g70770 expressed protein 9 4 6 19 At1g70810 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 9 4 6 20 At1g73650 expressed protein 9 4 6 21 At1g73680 "pathogen-responsive alpha-dioxygenase, putative similar to pathogen-inducible alpha-dioxygenase [Nicotiana attenuata] GI:12539609; contains Pfam profile PF03098: Animal haem peroxidase" 9 4 6 22 At1g73850 expressed protein 9 4 6 23 At1g73890 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 9 4 6 24 At1g74055 expressed protein 9 4 6 25 At1g74110 cytochrome P450 family protein similar to Cytochrome P450 78A4 (SP:O65012) Cytochrome P450 78A4 [Pinus radiata]; similar to cytochrome P-450 GB:AAB37231 from [Phalaenopsis sp. SM9108] 9 4 7 1 At1g74290 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 esterase/lipase/thioesterase family 9 4 7 2 At1g74340 dolichol phosphate-mannose biosynthesis regulatory protein-related similar to dolichol phosphate-mannose biosynthesis regulatory protein SP:Q9Z324 from [Mus musculus] 9 4 7 3 AT5G57480 PC-1 D04 9 4 7 4 3XSSC PC-1 D16 9 4 7 5 AT1G29930 PC-1 H04 9 4 7 6 3XSSC PC-1 H16 9 4 7 7 AT3G44150 PC-1 L04 9 4 7 8 3XSSC PC-1 L16 9 4 7 9 AT4G00810 PC-1 P04 9 4 7 10 3XSSC PC-1 P16 9 4 7 11 At1g77110 "auxin transport protein, putative similar to auxin transport protein EIR1 GI:3377507 from [Arabidopsis thaliana]" 9 4 7 12 At1g77150 expressed protein ; expression supported by MPSS 9 4 7 13 At1g77340 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 7 14 At1g77400 expressed protein 9 4 7 15 At1g77570 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 9 4 7 16 At1g77630 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 9 4 7 17 At1g77770 expressed protein 9 4 7 18 At1g77810 galactosyltransferase family protein contains Pfam profile PF01762: Galactosyltransferase 9 4 7 19 At1g80380 phosphoribulokinase/uridine kinase-related 9 4 7 20 At1g80420 "DNA repair protein, putative (XRCC1) identical to putative DNA repair protein XRCC1 [Arabidopsis thaliana] GI:11181954; contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 9 4 7 21 At1g80610 expressed protein 9 4 7 22 At1g80670 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400) (1 weak); similar to Hypothetical RAE1-like protein.(SP:Q38942) [Arabidopsis thaliana]; similar to mRNA-associated protein mrnp 41 ((mRNA export protein) (GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406) [Homo sapiens] 9 4 7 23 At1g80850 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 9 4 7 24 At1g80880 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 7 25 At2g01070 expressed protein similar to membrane protein PTM1 precursor isolog GB:AAB65479 9 4 8 1 At2g01110 thylakoid membrane formation protein / cpTatC (APG2) identical to thylakoid membrane formation protein (cpTatC) GI:15004994 from [Arabidopsis thaliana]; contains Pfam profile PF00902: MttB family; identical to cDNA apg2 for cpTatC GI:15004993 9 4 8 2 At2g04039 expressed protein 9 4 8 3 At2g04070 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 9 4 8 4 At2g04330 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 9 4 8 5 At2g04390 40S ribosomal protein S17 (RPS17A) 9 4 8 6 At2g04550 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 9 4 8 7 At2g04620 "cation efflux family protein potential member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, see PMID:11500563" 9 4 8 8 At2g04842 "threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative similar to SP|P18256 Threonyl-tRNA synthetase 2 (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Bacillus subtilis}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain" 9 4 8 9 At2g04880 WRKY family transcription factor (ZAP1) identical to ZAP1 GI:1064883 from [Arabidopsis thaliana]; contains Pfam profile: PF03106 WRKY DNA -binding domain 9 4 8 10 At2g12110 "expressed protein similar to At2g16170, At2g06640, At2g12100, At3g42590, At2g05460" 9 4 8 11 At2g12200 "ligase, putative similar to 10-formyltetrahydrofolate synthetase (Formate--tetrahydrofolate ligase (EC 6.3.4.3)) from Arabidopsis thaliana GI:5921663, Spinacia oleracea SP|P28723|" 9 4 8 12 At2g12905 expressed protein 9 4 8 13 At2g13125 hypothetical protein 9 4 8 14 At2g13560 "malate oxidoreductase, putative similar to NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum tuberosum}" 9 4 8 15 At2g13640 Golgi GDP mannose transporter (GONST1) identical to cDNA GDP-Mannose transporter (GONST1) GI:15487236; PMID 11595802 9 4 8 16 At2g13865 hypothetical protein 9 4 8 17 At2g14000 hypothetical protein 9 4 8 18 At2g17220 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] Swiss-Prot:Q06548" 9 4 8 19 At2g17270 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 9 4 8 20 At2g17470 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 9 4 8 21 At2g17530 "protein kinase family protein identical to SRPK2 [Arabidopsis thaliana] gi|9843645|emb|CAC03676; contains protein kinase domain, Pfam:PF00069" 9 4 8 22 At2g17700 protein kinase family protein similar to protein kinase [gi:170047] from Glycine max; contains a protein kinase domain profile (PDOC00100) (PF00069) 9 4 8 23 At2g17750 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 9 4 8 24 At2g17920 expressed protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 9 4 8 25 At2g17972 expressed protein 9 4 9 1 At2g20690 lumazine-binding family protein SP|P50854 Riboflavin synthase alpha chain (EC 2.5.1.9) {Actinobacillus pleuropneumoniae}; contains Pfam profile PF00677: Lumazine binding domain 9 4 9 2 At2g20740 expressed protein 9 4 9 3 At2g20835 expressed protein 9 4 9 4 At2g20880 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] GI:2281633" 9 4 9 5 At2g21045 senescence-associated family protein contains similarity to senescence-associated gene Ntdin from GI:7594903 [Nicotiana tabacum]; contains C2-domain profile. (PS50004;PF00168) 9 4 9 6 At2g21100 disease resistance-responsive protein-related / dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 9 4 9 7 At2g21235 "bZIP protein-related similar to VirE2-interacting protein VIP1 [Arabidopsis thaliana] GI:7258340, tbZIP transcription factor [Arabidopsis thaliana] GI:17065884" 9 4 9 8 At2g21270 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 9 4 9 9 At2g24150 expressed protein contains Pfam profile PF03006: Uncharacterised protein family (Hly-III / UPF0073) 9 4 9 10 At2g24220 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 9 4 9 11 At2g24390 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to SP|P54121 AIG2 protein {Arabidopsis thaliana} 9 4 9 12 At2g24440 expressed protein 9 4 9 13 At2g24600 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 4 9 14 At2g24670 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 9 4 9 15 At2g24850 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 9 4 9 16 At2g24915 hypothetical protein 9 4 9 17 At2g27600 "AAA-type ATPase family protein / vacuolar sorting protein-related similar to SP|P46467 SKD1 protein (Vacuolar sorting protein 4b) {Mus musculus}; contains Pfam profiles PF00004: ATPase AAA family, PF04212: MIT domain" 9 4 9 18 At2g27680 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 9 4 9 19 At2g27800 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 9 20 At2g27840 histone deacetylase-related / HD-related similar to nucleolar histone deacetylase HD2-p39 [Zea mays] GI:2257756; contains non-consensus donor splice site AT at exon2 and acceptor splice site AC at exon3. 9 4 9 21 At2g28040 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 9 4 9 22 At2g28085 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 9 4 9 23 At2g28250 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 4 9 24 At2g28305 expressed protein contains Pfam profile PF03641: decarboxylase family protein 9 4 9 25 At2g31030 oxysterol-binding family protein similar to SWH1 [Saccharomyces cerevisiae] GI:402658; contains Pfam profile PF01237: Oxysterol-binding protein 9 4 10 1 At2g31081 Clavata3 / ESR-Related-4 (CLE4) CLAVATA3/ESR-Related 4 (CLE4) 9 4 10 2 At2g31220 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 4 10 3 At2g31280 basic helix-loop-helix (bHLH) protein-related identical to cDNA bHLH transcription factor (bHLH gamma gene) GI:32562999; weak similarity to bHLH transcription activator anthocyanin 1 [Petunia x hybrida] GI:10998404 9 4 10 4 At2g31420 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 9 4 10 5 At2g31480 expressed protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 9 4 10 6 At2g31650 "trithorax 1 (ATX-1) (TRX1) identical to trithorax-like protein 1 GI:12659210 from [Arabidopsis thaliana]; characterized in Alvarez-Venegas R,et al, ATX-1, an Arabidopsis Homolog of Trithorax, Activates Flower Homeotic Genes.(Curr Biol. 2003 Apr 15;13(8):627-37 PMID: 12699618); contains Pfam profiles PF00856: SET domain, PF00855: PWWP domain, PF00628, PHD-finger; identical to cDNA trithorax-like protein 1 (TRX1) GI:12659209" 9 4 10 7 At2g31710 expressed protein 9 4 10 8 At2g34300 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 9 4 10 9 At2g34320 hypothetical protein 9 4 10 10 At2g34440 MADS-box family protein similar to SP|Q9XGJ4 MADS box protein GGM13 {Gnetum gnemon}; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 9 4 10 11 At2g34500 cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae} 9 4 10 12 At2g34650 "protein kinase PINOID (PID) identical to protein kinase PINOID [Arabidopsis thaliana] gi|7208442|gb|AAF40202; contains protein kinase domain, Pfam:PF00069" 9 4 10 13 At2g34700 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 9 4 10 14 At2g34890 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 9 4 10 15 At2g34940 "vacuolar sorting receptor, putative similar to BP-80 vacuolar sorting receptor [Pisum sativum] GI:1737222" 9 4 10 16 At2g37530 expressed protein ; expression supported by MPSS 9 4 10 17 At2g37570 expressed protein 9 4 10 18 At2g37740 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 9 4 10 19 At2g37770 aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155] and aldose reductase [GI:202852][Rattus norvegicus] 9 4 10 20 At2g37940 expressed protein 9 4 10 21 At2g37990 ribosome biogenesis regulatory protein (RRS1) family protein contains Pfam profile PF04939: Ribosome biogenesis regulatory protein (RRS1); similar to Ribosome biogenesis regulatory protein homolog (Swiss-Prot:Q15050) [Homo sapiens] 9 4 10 22 At2g38160 expressed protein 9 4 10 23 At2g38185 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 9 4 10 24 At2g40745 expressed protein 9 4 10 25 At2g40800 expressed protein 9 4 11 1 At2g40935 "expressed protein low similarity to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 9 4 11 2 At2g40960 expressed protein 9 4 11 3 At2g41130 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 4 11 4 At2g41180 sigA-binding protein-related low similarity to SigA binding protein [Arabidopsis thaliana] GI:6980074; contains Pfam domain PF05678: VQ motif 9 4 11 5 At2g41360 F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF00646: F-box domain 9 4 11 6 At2g41420 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 9 4 11 7 At2g43970 La domain-containing protein contains Pfam profile PF05383: La domain 9 4 11 8 At2g44020 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 9 4 11 9 At2g44150 SET domain-containing protein (ASHH3) low similarity to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain; identical to cDNA ASH1-like protein 3 (ASHH3) partial cds GI:15488419 9 4 11 10 At2g44200 expressed protein 9 4 11 11 At2g44380 DC1 domain-containing protein highly similar to GP|2435515|AF024504; contains Pfam profile PF03107: DC1 domain 9 4 11 12 At2g44440 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 9 4 11 13 At2g44590 "dynamin-like protein D (DL1D) identical to dynamin-like protein D [Arabidopsis thaliana] GI:19569770; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 9 4 11 14 At2g44640 expressed protein 9 4 11 15 At2g47320 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 9 4 11 16 At2g47370 expressed protein 9 4 11 17 At2g47520 "AP2 domain-containing transcription factor, putative " 9 4 11 18 At2g47580 small nuclear ribonucleoprotein U1A / spliceosomal protein U1A / U1snRNP-specific protein identical to GB:Z49991 U1snRNP-specific protein [Arabidopsis thaliana] 9 4 11 19 At2g47750 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 9 4 11 20 At2g47810 histone-like transcription factor (CBF/NF-Y) family protein contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to LEC1-like protein (GI:22536010) [Phaseolus coccineus] 9 4 11 21 At2g47930 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 9 4 11 22 At2g47970 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 9 4 11 23 At3g03305 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 9 4 11 24 At3g03360 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 9 4 11 25 At3g03540 phosphoesterase family protein similar to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 9 4 12 1 At3g03600 "ribosomal protein S2, mitochondrial (RPS2) identical to SP|Q9GCB9 Mitochondrial ribosomal protein S2 {Arabidopsis thaliana}; contains Pfam profile PF00318: ribosomal protein S2" 9 4 12 2 At3g03770 "leucine-rich repeat transmembrane protein kinase, putative may contain C-terminal ser/thr protein kinase domain, similar to serine/threonine protein kinase Pto GB:AAB47421 [Lycopersicon esculentum]" 9 4 12 3 At3g03810 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 9 4 12 4 At3g03950 expressed protein contains Pfam profile PF04146: YT521-B-like family 9 4 12 5 At3g03980 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain type dehydrogenase/reductase SP:Q08632 [Picea abies] 9 4 12 6 At3g06520 agenet domain-containing protein contains Pfam PF05641: Agenet domain 9 4 12 7 At3g06560 "poly (A) polymerase family protein similar to SP|Q9BWT3 Poly(A) polymerase gamma (EC 2.7.7.19) (PAP gamma) (Polynucleotide adenylyltransferase gamma) (SRP RNA 3' adenylating enzyme) {Homo sapiens}; contains Pfam profiles PF04926: Poly(A) polymerase predicted RNA binding domain, PF04928: Poly(A) polymerase central domain" 9 4 12 8 At3g66658 "betaine-aldehyde dehydrogenase, putative similar to betaine-aldehyde dehydrogenase, chloroplast precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202; contains non-consensus splice site (GC) at intron 13" 9 4 12 9 At3g06700 60S ribosomal protein L29 (RPL29A) similar to ribosomal protein L29 GI:7959366 [Panax ginseng] 9 4 12 10 At3g06880 transducin family protein / WD-40 repeat family protein similar to PAK/PLC-interacting protein 1 (GI:4211689) {Homo sapiens} 9 4 12 11 At3g06930 protein arginine N-methyltransferase family protein similar to protein arginine methyltransferase [Mus musculus] GI:5257221 9 4 12 12 At3g07090 expressed protein 9 4 12 13 At3g07150 hypothetical protein 9 4 12 14 At3g10180 kinesin motor protein-related similar to centromere protein E GB:4502781 [Homo sapiens] 9 4 12 15 At3g10240 F-box protein-related contains weak Pfam:PF00646 F-box domain 9 4 12 16 At3g10370 "glycerol-3-phosphate dehydrogenase, putative similar to glycerol-3-phosphate dehydrogenase GB:BAA08926 from Mus musculus [SP|Q64521], Homo sapiens [GI:1020315], Rattus norvegicus [SP|P35571]; contains Pfam profile PF01266 FAD dependent oxidoreductase" 9 4 12 17 At3g10420 "sporulation protein-related similar to hypothetical proteins: GB:P51281 [Chloroplast Porphyra purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540 [Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium caldarium]; similar to stage III sporulation protein AA (GI:18145497) [Clostridium perfringens str. 13]; similar to stage III sporulation protein AA (mutants block sporulation after engulfment) (GI:22777578) [Oceanobacillus iheyensis]" 9 4 12 18 At3g10550 expressed protein 9 4 12 19 At3g10590 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 9 4 12 20 At3g10720 "pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase" 9 4 12 21 At3g10770 expressed protein 9 4 12 22 At3g13210 "crooked neck protein, putative / cell cycle protein, putative similar to Swiss-Prot:P17886 crooked neck protein [Drosophila melanogaster]" 9 4 12 23 At3g13226 regulatory protein RecX family protein contains Pfam PF02631: regulatory protein RecX 9 4 12 24 At3g13360 expressed protein 9 4 12 25 At3g13420 expressed protein 9 4 13 1 At3g13580 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] 9 4 13 2 At3g13620 amino acid permease family protein weak similarity to SP|Q9WTR6 Cystine/glutamate transporter (Amino acid transport system xc-) {Mus musculus}; contains Pfam profile PF00324: Amino acid permease 9 4 13 3 At3g13730 "cytochrome P450, putative similar to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; identical to CYP90D (GI:14971017) [Arabidopsis thaliana]" 9 4 13 4 At3g13780 expressed protein 9 4 13 5 At3g16260 metallo-beta-lactamase family protein 9 4 13 6 At3g16320 "cell division cycle family protein / CDC family protein similar to SP|P30260|CC27_HUMAN Protein CDC27Hs (Cell division cycle protein 27 homolog) Homo sapiens, C-terminus similar to C-term of cell division control protein 27 SP:P38042 (Saccharomyces cerevisiae); contains Pfam profile PF00515 TPR Domain" 9 4 13 7 At3g16500 auxin-responsive AUX/IAA family protein similar to SP|O24408|AXII_ARATH Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) {Arabidopsis thaliana}; contains Pfam profile: PF02309: AUX/IAA family 9 4 13 8 At3g16530 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 9 4 13 9 At3g16690 nodulin MtN3 family protein contains Pfam PF03083 MtN3/saliva family 9 4 13 10 At3g16750 expressed protein ; expression supported by MPSS 9 4 13 11 At3g16890 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 13 12 At3g16940 calmodulin-binding protein similar to anther ethylene-upregulated protein ER1 GI:11612392 from [Nicotiana tabacum]; contains Pfam profile: PF00612 IQ calmodulin-binding motif (3 copies) 9 4 13 13 At3g19570 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 9 4 13 14 At3g19610 hypothetical protein 9 4 13 15 At3g19790 hypothetical protein ; expression supported by MPSS 9 4 13 16 At3g19850 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 9 4 13 17 At3g20015 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 9 4 13 18 At3g20070 expressed protein 9 4 13 19 At3g20210 "vacuolar processing enzyme, putative / asparaginyl endopeptidase, putative similar to asparaginyl endopeptidase (VmPE-1) [Vigna mungo] GI:4589396; contains Pfam profile PF01650: Peptidase C13 family; identical to cDNA vacuolar processing enzyme delta preproprotein (At3g20210) GI:24850432" 9 4 13 20 At3g20270 "lipid-binding serum glycoprotein family protein similar to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain" 9 4 13 21 At3g22980 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] 9 4 13 22 At3g23040 hypothetical protein 9 4 13 23 At3g23180 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]" 9 4 13 24 At3g23240 ethylene-responsive factor 1 / ethylene response factor 1 (ERF1) identical to ethylene response factor 1 GB:AAD03544 from [Arabidopsis thaliana] 9 4 13 25 At3g23380 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 9 4 14 1 At3g23440 expressed protein ; expression supported by MPSS 9 4 14 2 At3g23640 glycosyl hydrolase family 31 protein similar to alpha-glucosidase II from SP:Q9F234 [Bacillus thermoamyloliquefaciens]; contains Pfam profile: PF01055 Glycosyl hydrolases family 31 9 4 14 3 At3g23690 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 4 14 4 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 9 4 14 5 At3g26570 phosphate transporter family protein contains Pfam profile: PF01384 phosphate transporter family 9 4 14 6 At3g26680 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 9 4 14 7 At3g26730 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 4 14 8 At3g26870 self-incompatibility protein-related low similarity to self-incompatibility [Papaver nudicaule] GI:3097262 9 4 14 9 At3g26920 F-box family protein contains F-box domain Pfam:PF00646 9 4 14 10 At3g27080 mitochondrial import receptor subunit TOM20-3 / translocase of outer membrane 20 kDa subunit 3 (TOM20-3) identical to mitochondrial import receptor subunit TOM20-3 SP:P82874 from [Arabidopsis thaliana] 9 4 14 11 At3g27140 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GB:T09640 from [Medicago sativa]" 9 4 14 12 At3g30240 hypothetical protein 9 4 14 13 At3g30310 hypothetical protein 9 4 14 14 At3g30520 hypothetical protein 9 4 14 15 At3g30590 hypothetical protein 9 4 14 16 At3g30770 hypothetical protein 9 4 14 17 At3g30841 "2,3-biphosphoglycerate-independent phosphoglycerate mutase-related / phosphoglyceromutase-related contains weak similarity to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1). (Swiss-Prot:Q59007) [Methanococcus jannaschii]" 9 4 14 18 At3g31910 hypothetical protein 9 4 14 19 At3g31960 expressed protein 9 4 14 20 At3g44780 hypothetical protein 9 4 14 21 At3g44820 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 9 4 14 22 At3g44990 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative " 9 4 14 23 At3g45050 expressed protein 9 4 14 24 At3g45200 hypothetical protein 9 4 14 25 At3g45280 "syntaxin 72 (SYP72) identical to syntaxin of plants 72 (SYP72) (GI:13811650)[Arabidopsis thaliana]; identified as SYP72 in Sanderfoot, A.A., et al, Plant Physiology 124:1558-69(2000); syntaxin 8 - Homo sapiens, EMBL:AF115323" 9 4 15 1 At3g45460 hypothetical protein 9 4 15 2 At3g45525 hypothetical protein 9 4 15 3 At3g48330 protein-L-isoaspartate O-methyltransferase / PIMT (PCM) identical to SP|Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana} 9 4 15 4 At3g48400 DC1 domain-containing protein similar to UV-B light insensitive ULI3 [Arabidopsis thaliana] GI:17225050; contains Pfam profile PF03107: DC1 domain 9 4 15 5 At3g48570 "protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans]" 9 4 15 6 At3g48630 "hypothetical protein hypothetical protein - Arabidopsis thaliana, EMBL:AC006438.2" 9 4 15 7 At3g48810 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 15 8 At3g48860 expressed protein 9 4 15 9 At3g49020 F-box family protein contains F-box domain Pfam:PF00646 9 4 15 10 At3g49070 expressed protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana] 9 4 15 11 At3g51920 calmodulin-9 (CAM9) identical to calmodulin 9 GI:5825602 from [Arabidopsis thaliana]; contains Pfam profile PF00036: EF hand 9 4 15 12 At3g51960 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 9 4 15 13 At3g52100 PHD finger family protein contains Pfam profile PF00628: PHD-finger 9 4 15 14 At3g52140 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 9 4 15 15 At3g52290 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 9 4 15 16 At3g52340 sucrose-phosphatase 2 (SPP2) identical to sucrose-phosphatase (SPP2) [Arabidopsis thaliana] GI:13811669; supporting cDNA gi|13811668|gb|AF356816.1|AF356816 9 4 15 17 At3g52520 expressed protein 9 4 15 18 At3g52560 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 9 4 15 19 At3g55080 "SET domain-containing protein low similarity to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 9 4 15 20 At3g55140 pectate lyase family protein similar to pollen allergen Amb a 1.3 SP:P27761 from [Ambrosia artemisiifolia] 9 4 15 21 At3g55320 ABC transporter family protein similar to multidrug resistant P-glycoprotein pmdr1 GI:4204793 from [Solanum tuberosum] 9 4 15 22 At3g55370 Dof-type zinc finger domain-containing protein 9 4 15 23 At3g55550 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 9 4 15 24 At3g55605 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 9 4 15 25 At3g55760 expressed protein 9 4 16 1 At3g55820 hypothetical protein 9 4 16 2 At3g58690 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 9 4 16 3 At3g58740 "citrate synthase, glyoxysomal, putative strong similarity to SP|P49299 Citrate synthase, glyoxysomal precursor {Cucurbita maxima}; contains Pfam profile PF00285: Citrate synthase" 9 4 16 4 At3g58920 F-box family protein contains F-box domain Pfam:PF00646 9 4 16 5 At3g58980 F-box family protein contains two F-box domains Pfam:PF00646 9 4 16 6 At3g59130 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 4 16 7 At3g59190 F-box family protein contains F-box domain Pfam:PF00646 9 4 16 8 At3g59350 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 9 4 16 9 At3g59390 "expressed protein protein CG15643 - Drosophila melanogaster, EMBL:AE003499" 9 4 16 10 At3g62060 pectinacetylesterase family protein similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase 9 4 16 11 At3g62120 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|P07814 Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] {Homo sapiens}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain" 9 4 16 12 At3g62300 agenet domain-containing protein contains Pfam PF05641: Agenet domain 9 4 16 13 At3g62360 expressed protein 9 4 16 14 At3g62530 PBS lyase HEAT-like repeat-containing protein contains Pfam profile: PF03130 PBS lyase HEAT-like repeat 9 4 16 15 At3g62590 lipase class 3 family protein contains Pfam profile PF01764: Lipase 9 4 16 16 At3g62750 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 9 4 16 17 At3g62790 NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-15 kDa) (CI-15 kDa) (Swiss-Prot:O43920) [Homo sapiens] 9 4 16 18 At4g01660 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 9 4 16 19 At4g01710 "actin polymerization factor protein-related similar to human ARP2/3 complex 16 kd subunit, GenBank accession number O15511 likely functions to control the polymerization of actin" 9 4 16 20 At4g01880 expressed protein contains Pfam PF05206: Protein of unknown function (DUF715) 9 4 16 21 At4g01915 expressed protein 9 4 16 22 At4g02040 expressed protein 9 4 16 23 At4g02090 expressed protein 9 4 16 24 At4g02230 60S ribosomal protein L19 (RPL19C) similar to L19 from several species 9 4 16 25 At4g02290 "glycosyl hydrolase family 9 protein similar to endo-1,4-beta glucanase; ATCEL2 GI:3132891 from [Arabidopsis thaliana]" 9 4 17 1 At4g05230 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 9 4 17 2 At4g05290 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 9 4 17 3 At4g05460 F-box family protein (FBL20) contains similarity to N7 protein GI:3273101 from [Medicago truncatula] 9 4 17 4 At4g05530 short-chain dehydrogenase/reductase (SDR) family protein similar to peroxisomal short-chain alcohol dehydrogenase GI:4105190 from [Homo sapiens] 9 4 17 5 At4g06526 hypothetical protein 9 4 17 6 At4g06672 "hypothetical protein contains a non-consensus TT donor splice site, supported by homologous protein alignments." 9 4 17 7 At4g07440 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 9 4 17 8 At4g07485 hypothetical protein 9 4 17 9 At4g10640 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 9 4 17 10 At4g10700 hypothetical protein 9 4 17 11 At4g10860 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 9 4 17 12 At4g10920 transcriptional coactivator p15 (PC4) family protein (KELP) similar to SP|P53999 Activated RNA polymerase II transcriptional coactivator p15 (PC4) (p14) {Homo sapiens}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4); supporting cDNA gi|2997685|gb|AF053303.1|AF053303 9 4 17 13 At4g11060 single-strand-binding family protein contains Pfam domain PF00436: Single-strand binding protein family 9 4 17 14 At4g11100 expressed protein 9 4 17 15 At4g11260 "phosphatase-related low similarity to protein phosphatase T [Saccharomyces cerevisiae] GI:897806; contains Pfam profiles PF00515: TPR Domain, PF05002: SGS domain, PF04969: CS domain" 9 4 17 16 At4g11320 "cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 9 4 17 17 At4g14050 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 4 17 18 At4g14096 F-box family protein contains F-box domain Pfam:PF00646 9 4 17 19 At4g14210 "phytoene dehydrogenase, chloroplast / phytoene desaturase (PDS) identical to SP|Q07356 Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase){Arabidopsis thaliana}; high similarity to phytoene desaturase [Lycopersicon esculentum][GI:19287]" 9 4 17 20 At4g14260 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295); expression supported by MPSS 9 4 17 21 At4g14385 expressed protein 9 4 17 22 At4g14410 basic helix-loop-helix (bHLH) family protein 9 4 17 23 At4g14570 acylaminoacyl-peptidase-related similar to Acylamino-acid-releasing enzyme (EC 3.4.19.1) (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) (Swiss-Prot:P13676) [Rattus norvegicus]; annotated with nonconsensus TT and CT acceptor splice sites. 9 4 17 24 At4g14620 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 9 4 17 25 At4g16990 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 9 4 18 1 At4g17020 "transcription factor-related contains weak similarity to Swiss-Prot:Q92759 TFIIH basal transcription factor complex p52 subunit (Basic transcription factor 52 kDa subunit, BTF2-p52, General transcription factor IIH polypeptide 4) [Homo sapiens]" 9 4 18 2 At4g17190 farnesyl pyrophosphate synthetase 2 (FPS2) / FPP synthetase 2 / farnesyl diphosphate synthase 2 identical to SP|Q43315 Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis thaliana} 9 4 18 3 At4g17240 expressed protein 9 4 18 4 At4g17440 expressed protein 9 4 18 5 At4g17490 "ethylene-responsive element-binding protein, putative similar to SP|O80341 Ethylene responsive element binding factor 5 (AtERF5) {Arabidopsis thaliana}" 9 4 18 6 At4g17615 calcineurin B-like protein 1 (CBL1) identical to calcineurin B-like protein 1 (GI:3309082) [Arabidopsis thaliana] 9 4 18 7 At4g17680 expressed protein 9 4 18 8 At4g20280 transcription initiation factor IID (TFIID) 28 kDa subunit (TAFII-28) family protein similar to SP|Q15544 Transcription initiation factor TFIID 28 kDa subunit (TAFII-28) (TAFII28) (TFIID subunit p30-beta) {Homo sapiens}; contains Pfam profile PF04719: hTAFII28-like protein conserved region 9 4 18 9 At4g20330 "transcription initiation factor-related contains weak similarity to Transcription initiation factor IIE, beta subunit (TFIIE-beta) (Swiss-Prot:P29084) [Homo sapiens]" 9 4 18 10 At4g20480 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 9 4 18 11 At4g20670 "pollen coat receptor kinase, putative contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; has extracellular domain--PMID:11431566; very similar to At3g21990 (MZN24.17) [Arabidopsis thaliana] ; receptor-like protein kinase, RLK3, Arabidopsis thaliana, AJ011674; receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]" 9 4 18 12 At4g20840 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 9 4 18 13 At4g20900 "male sterility MS5 / pollenless 3 nearly identical to male sterility MS5 [Arabidopsis thaliana] GI:3859112, pollenless3 [Arabidopsis thaliana] GI:4028970" 9 4 18 14 At4g21090 "adrenodoxin-like ferredoxin 1 similar to SP|P10109 Adrenodoxin, mitochondrial precursor (Adrenal ferredoxin) (Hepatoredoxin) from Homo sapiens, SP|P29330 Adrenodoxin (Adrenal ferredoxin) from Ovis aries; contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domains; identical to GI:28192428" 9 4 18 15 At4g21130 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); some similarity to a group of proteins with homology to mammalian apoptosis regulators identified in zebrafish (PUBMED:10917738)Apaf-1(gi:7677507) 9 4 18 16 At4g23710 "vacuolar ATP synthase subunit G 2 (VATG2) / V-ATPase G subunit 2 (VAG2) / vacuolar proton pump G subunit 2 identical to Swiss-Prot:O82629 vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2, Vacuolar proton pump G subunit 2) [Arabidopsis thaliana]" 9 4 18 17 At4g23760 expressed protein 9 4 18 18 At4g23920 "UDP-glucose 4-epimerase, putative / UDP-galactose 4-epimerase, putative / Galactowaldenase, putative similar to UDP-galactose 4-epimerase from Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba GI:3021357 [AJ005082]" 9 4 18 19 At4g23960 F-box family protein similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 9 4 18 20 At4g24130 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 9 4 18 21 At4g24175 expressed protein 9 4 18 22 At4g24290 expressed protein 9 4 18 23 At4g24350 phosphorylase family protein contains Pfam PF01048: Phosphorylase family 9 4 18 24 At4g26940 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 9 4 18 25 At4g26970 "aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative strong similarity to SP|P49608 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Cucurbita maxima}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain" 9 4 19 1 At4g27130 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 9 4 19 2 At4g27190 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 9 4 19 3 At4g27390 "expressed protein hypothetical protein, Synechocystis sp., PIR2:S77328" 9 4 19 4 At4g27435 expressed protein 9 4 19 5 At4g27595 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} 9 4 19 6 At4g27620 expressed protein 9 4 19 7 At4g30210 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-cytochrome P450 oxydoreductase from [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183564, GI:13183566" 9 4 19 8 At4g30270 "MERI-5 protein (MERI-5) (MERI5B) / endo-xyloglucan transferase / xyloglucan endo-1,4-beta-D-glucanase (SEN4) identical to endo-xyloglucan transferase gi:944810, SP|P24806 MERI-5 protein precursor (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) {Arabidopsis thaliana}" 9 4 19 9 At4g30430 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 9 4 19 10 At4g30480 tetratricopeptide repeat (TPR)-containing protein similar to SP|Q99614 Tetratricopeptide repeat protein 1 {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 9 4 19 11 At4g30630 expressed protein 9 4 19 12 At4g30690 "translation initiation factor 3 (IF-3) family protein similar to SP|P33319 Translation initiation factor IF-3 {Proteus vulgaris}; contains Pfam profiles PF00707: Translation initiation factor IF-3, C-terminal domain, PF05198: Translation initiation factor IF-3, N-terminal domain" 9 4 19 13 At4g30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related contains similarity to CDK-activating kinase assembly factor MAT1 (RING finger protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (Swiss-Prot:P51950) [Marthasterias glacialis] 9 4 19 14 At4g30870 repair endonuclease family protein contains Pfam PF02732 : ERCC4 domain; similar to repair endonuclease (TIGR:At5g41150) [Arabidopsis thaliana] 9 4 19 15 At4g33390 hypothetical protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827) 9 4 19 16 At4g33450 "myb family transcription factor (MYB69) contains PFAM profile: Myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB69) mRNA, partial cds GI:3941495" 9 4 19 17 At4g33600 expressed protein 9 4 19 18 At4g33640 expressed protein 9 4 19 19 At4g33810 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 9 4 19 20 At4g33865 40S ribosomal protein S29 (RPS29C) 9 4 19 21 At4g33990 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 19 22 At4g34050 "caffeoyl-CoA 3-O-methyltransferase, putative nearly identical to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa] isoform contains a GT-TG intron which removes an internal segment of the protein." 9 4 19 23 AT5G57480 PC-1 D04 9 4 19 24 3XSSC PC-1 D16 9 4 19 25 AT1G29930 PC-1 H04 9 4 20 1 3XSSC PC-1 H16 9 4 20 2 AT3G44150 PC-1 L04 9 4 20 3 3XSSC PC-1 L16 9 4 20 4 AT4G00810 PC-1 P04 9 4 20 5 3XSSC PC-1 P16 9 4 20 6 At4g36600 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to SP|P20075 Embryonic protein DC-8 {Daucus carota}; contains Pfam profile PF02987: Late embryogenesis abundant protein 9 4 20 7 At4g36640 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max, SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis] and to SEC14 cytosolic factor (SP:P53989) [Candida glabrata]" 9 4 20 8 At4g36780 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 9 4 20 9 At4g36840 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 9 4 20 10 At4g37010 "caltractin, putative / centrin, putative similar to Caltractin (Centrin) SP:P41210 from [Atriplex nummularia]" 9 4 20 11 At4g37080 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 9 4 20 12 At4g37235 expressed protein 9 4 20 13 At4g37290 expressed protein 9 4 20 14 At4g39880 ribosomal protein L23 family protein contains Pfam profile PF00276: ribosomal protein L23 9 4 20 15 At4g39940 "adenylylsulfate kinase 2 (AKN2) identical to adenylylsulfate kinase 2, chloroplast precursor (APS kinase, Adenosine-5'phosphosulfate kinase, ATP adenosine-5'- phosphosulfate 3'-phosphotransferase) [Arabidopsis thaliana] SWISS-PROT:O49196" 9 4 20 16 At4g40080 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to CLATHRIN COAT ASSEMBLY PROTEIN AP180 - Mus musculus, SWISSPROT:Q61548" 9 4 20 17 At5g01015 expressed protein 9 4 20 18 At5g01180 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 9 4 20 19 At5g01230 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 9 4 20 20 At5g01370 expressed protein 9 4 20 21 At5g01430 Got1-like family protein contains Pfam profile: PF04178 Got1-like family 9 4 20 22 At5g04130 "DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative similar to SP|O50627 DNA gyrase subunit B (EC 5.99.1.3) {Bacillus halodurans}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00204: DNA topoisomerase II (N-terminal region), PF00986: DNA gyrase, B subunit, carboxyl terminus, PF01751: Toprim domain" 9 4 20 23 At5g04190 phytochrome kinase substrate-related contains similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 [Arabidopsis thaliana] 9 4 20 24 At5g04370 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 9 4 20 25 At5g04430 "KH domain-containing protein NOVA, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70477" 9 4 21 1 At5g04620 "aminotransferase class I and II family protein similar to 8-amino-7-oxononanoate synthase, Bacillus sphaericus, PIR:JQ0512 [SP|P22806], Bacillus subtilis [SP|P53556]; contains Pfam protile PF00155 aminotransferase, classes I and II" 9 4 21 2 At5g04670 "expressed protein BRL protein, Homo sapiens, EMBL:AF005067" 9 4 21 3 At5g04830 expressed protein 9 4 21 4 At5g04870 "calcium-dependent protein kinase isoform AK1 (AK1) identical to calcium-dependent protein kinase, isoform AK1 (CDPK) [Arabidopsis thaliana] SWISS-PROT:Q06850; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 9 4 21 5 At5g07420 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 9 4 21 6 At5g07475 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 9 4 21 7 At5g07650 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128" 9 4 21 8 At5g07700 myb family transcription factor (MYB76) contains Pfam profile: PF00249 myb-like DNA-binding domain 9 4 21 9 At5g07900 "mitochondrial transcription termination factor family protein / mTERF family protein low similarity to SP|Q99551 Transcription termination factor, mitochondrial precursor (mTERF) {Homo sapiens}; contains Pfam profile PF02536: mTERF" 9 4 21 10 At5g07960 expressed protein contains Pfam PF03669: Uncharacterised protein family (UPF0139) 9 4 21 11 At5g08130 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 9 4 21 12 At5g08160 "serine/threonine protein kinase, putative identical to serine/threonine protein kinase [Arabidopsis thaliana] gi|2109293|gb|AAB69123" 9 4 21 13 At5g11200 "DEAD/DEAH box helicase, putative " 9 4 21 14 At5g11260 bZIP protein HY5 (HY5) identical to HY5 protein GI:2251085 from [Arabidopsis thaliana] 9 4 21 15 At5g11430 transcription elongation factor-related contains weak similarity to transcription elongation factors 9 4 21 16 At5g11490 "adaptin family protein similar to SP|Q9WV76 Adapter-related protein complex 4 beta 1 subunit (Beta subunit of AP- 4) {Mus musculus}, beta-adaptin Drosophila 1 {Drosophila melanogaster} GI:434902; contains Pfam profile: PF01602 Adaptin N terminal region" 9 4 21 17 At5g11650 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family; low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162" 9 4 21 18 At5g11710 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Af10-protein (GI:1724114) [Avena fatua]; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis]; Af10-protein, Avena fatua, EMBL:U80041" 9 4 21 19 At5g11890 expressed protein 9 4 21 20 At5g11950 expressed protein contains Pfam profile PF03641: decarboxylase family protein 9 4 21 21 At5g15090 "porin, putative / voltage-dependent anion-selective channel protein, putative similar to SP|P42055 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) {Solanum tuberosum}; contains Pfam profile PF01459: Eukaryotic porin; identical to cDNA voltage-dependent anion-selective channel protein GI:4006940" 9 4 21 22 At5g15150 homeobox-leucine zipper protein 7 (HAT7) / HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7) (HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis thaliana] 9 4 21 23 At5g15300 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 4 21 24 At5g15360 hypothetical protein 9 4 21 25 At5g15530 biotin carboxyl carrier protein 2 (BCCP2) identical to biotin carboxyl carrier protein isoform 2 [Arabidopsis thaliana] gi|8886869|gb|AAF80592 9 4 22 1 At5g15570 "expressed protein hypothetical protein F14P3.19 - Arabidopsis thaliana, EMBL:AC009755" 9 4 22 2 At5g15730 "serine/threonine protein kinase, putative similar to protein-serine/threonine kinase [Nicotiana tabacum] gi|505146|dbj|BAA06538" 9 4 22 3 At5g15790 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 4 22 4 At5g18410 expressed protein similar to p53 inducible protein [Homo sapiens] GI:5616320 9 4 22 5 At5g18470 curculin-like (mannose-binding) lectin family protein contains Pfam profile: PF01453 lectin (probable mannose binding) 9 4 22 6 At5g18620 "DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain" 9 4 22 7 At5g18640 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 9 4 22 8 At5g18800 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein contains Pfam profile: PF05850 NADH-ubiquinone oxidoreductase 19 kDa subunit 9 4 22 9 At5g18850 expressed protein 9 4 22 10 At5g19010 "mitogen-activated protein kinase, putative / MAPK, putative (MPK16) mitogen-activated protein kinase (MAPK)(AtMPK16), PMID:12119167; similar to ATMPK9, Arabidopsis thaliana, EMBL:AB038694" 9 4 22 11 At5g19040 adenylate isopentenyltransferase 5 / cytokinin synthase (IPT5) identical to adenylate isopentenyltransferase (IPT5) [Arabidopsis thaliana] GI:14279056 9 4 22 12 At5g22390 expressed protein 9 4 22 13 At5g22450 expressed protein 9 4 22 14 At5g22600 expressed protein ; expression supported by MPSS 9 4 22 15 At5g22650 "expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4;" 9 4 22 16 At5g22810 "GDSL-motif lipase, putative similar to EXL3 (GP:15054386) [Arabidopsis thaliana]" 9 4 22 17 At5g22860 serine carboxypeptidase S28 family protein contains Pfam profile: PF05577 serine carboxypeptidase S28 9 4 22 18 At5g23030 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 9 4 22 19 At5g23090 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) identical to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 9 4 22 20 At5g25754 expressed protein 9 4 22 21 At5g25790 "tesmin/TSO1-like CXC domain-containing protein similar to SP|Q9Y4I5 Tesmin (Metallothionein-like 5, testis-specific) {Homo sapiens}; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain" 9 4 22 22 At5g25970 "hypothetical protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 9 4 22 23 At5g26020 hypothetical protein 9 4 22 24 At5g26180 NOL1/NOP2/sun family protein similar to NOL1R [Homo sapiens] GI:16226071; contains Pfam profile PF01189: NOL1/NOP2/sun family 9 4 22 25 At5g26220 ChaC-like family protein contains Pfam profile: PF04752 ChaC-like protein 9 4 23 1 At5g26667 uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) identical to uridylate kinase / UMP/CMP kinase SP:O04905 from [Arabidopsis thaliana] 9 4 23 2 At5g26740 expressed protein contains Pfam profile PF03619: Domain of unknown function 9 4 23 3 At5g33210 "zinc finger protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702), TIGR01623: putative zinc finger domain, LRP1 type" 9 4 23 4 At5g33300 chromosome-associated kinesin-related contains weak similarity to chromosome-associated kinesin KIF4A (Chromokinesin) (Swiss-Prot:P33174) [Mus musculus] 9 4 23 5 At5g34460 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 9 4 23 6 At5g34830 expressed protein ; expression supported by MPSS 9 4 23 7 At5g34960 "hypothetical protein includes At5g34960, At2g14450, At1g35920" 9 4 23 8 At5g35035 hypothetical protein 9 4 23 9 At5g35260 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 9 4 23 10 At5g35330 methyl-CpG-binding domain-containing protein similar to methyl-CpG binding protein MBD4 [Mus musculus] GI:3800807; contains Pfam profile PF01429: Methyl-CpG binding domain 9 4 23 11 At5g38450 cytochrome P450 family protein similar to cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus] 9 4 23 12 At5g38510 rhomboid family protein contains Pfam profile PF01694: Rhomboid family 9 4 23 13 At5g38670 F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF00646: F-box domain 9 4 23 14 At5g38730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 9 4 23 15 At5g38910 "germin-like protein, putative similar to SP|Q9LEA7; contains PS00725 germin family signature" 9 4 23 16 At5g38970 "cytochrome P450, putative similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum};" 9 4 23 17 At5g39150 "germin-like protein, putative similar to germin -like protein GLP6, Arabidopsis thaliana, EMBL:ATU75194 [SP|P92997]; contains PS00725 Germin family signature" 9 4 23 18 At5g39205 hypothetical protein 9 4 23 19 At5g42040 "26S proteasome non-ATPase regulatory subunit, putative similar to Swiss-Prot:P48556 26S proteasome non-ATPase regulatory subunit 8 (26S proteasome regulatory subunit S14) (p31) [Homo sapiens]" 9 4 23 20 At5g42080 "GTP-binding protein / phragmoplastin, putative strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family" 9 4 23 21 At5g42240 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II-3 precursor (SP:P52711) (CP-MII.3. [Hordeum vulgare] 9 4 23 22 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 9 4 23 23 At5g42470 expressed protein low similarity to BRE alpha b isoform [Homo sapiens] GI:16326573 9 4 23 24 At5g42530 expressed protein 9 4 23 25 At5g42700 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 9 4 24 1 At5g42765 expressed protein 9 4 24 2 At5g45300 glycosyl hydrolase family 14 protein similar to beta-amylase GI:13560977 from [Castanea crenata] 9 4 24 3 At5g45340 cytochrome P450 family protein similar to SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 9 4 24 4 At5g45500 expressed protein weak similarity to resistance complex protein I2C-2 [Lycopersicon esculentum] GI:2258317 9 4 24 5 At5g45560 "pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein weak similarity to SP|P79245 Steroidogenic acute regulatory protein, mitochondrial precursor (StAR) {Ovis aries}; contains Pfam profiles PF01852: START domain, PF00169: PH domain" 9 4 24 6 At5g45700 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 9 4 24 7 At5g45760 transducin family protein / WD-40 repeat family protein 9 4 24 8 At5g45900 autophagy 7 (APG7) nearly identical to autophagy 7 [Arabidopsis thaliana] GI:19912147; contains Pfam profile PF00899: ThiF family 9 4 24 9 At5g45960 GDSL-motif lipase/hydrolase family protein 9 4 24 10 At5g48540 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 9 4 24 11 At5g48580 FK506-binding protein 2-2 (FKBP15-2) / immunophilin / peptidyl-prolyl cis-trans isomerase / rotamase identical to SP|Q38936| FK506-binding protein 2-2 precursor (EC 5.2.1.8); 9 4 24 12 At5g48710 ubiquitin-related similar to SP|O13351 Ubiquitin-like protein smt3/pmt3 {Schizosaccharomyces pombe} 9 4 24 13 At5g48770 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 9 4 24 14 At5g48950 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 9 4 24 15 At5g48990 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 9 4 24 16 At5g49160 DNA (cytosine-5-)-methyltransferase (ATHIM) identical to SP|P34881 DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) {Arabidopsis thaliana} 9 4 24 17 At5g49210 expressed protein 9 4 24 18 At5g51920 expressed protein ; expression supported by MPSS 9 4 24 19 At5g51980 "WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative 99.8% identical to zfwd2 protein (GI:12057166) [Arabidopsis thaliana]; contains 6 copies (2 weak) Pfam PF00400: WD domain, G-beta repeat; contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) domain" 9 4 24 20 At5g52140 zinc finger protein-related 9 4 24 21 At5g52200 expressed protein 9 4 24 22 At5g52370 expressed protein 9 4 24 23 At5g52430 hydroxyproline-rich glycoprotein family protein Common family member At4g25620 [Arabidopsis thaliana] 9 4 24 24 At5g52590 RabGAP/TBC domain-containing protein contains similarity to SP|P48365 GTPase-activating protein GYP7 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 9 4 24 25 At5g52650 40S ribosomal protein S10 (RPS10C) contains similarity to 40S ribosomal protein S10 9 4 25 1 At5g55310 "DNA topoisomerase I, putative similar to Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis thaliana]" 9 4 25 2 At5g55370 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein contains similarity to wax synthase similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 9 4 25 3 At5g55540 expressed protein 9 4 25 4 At5g55590 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 9 4 25 5 At5g55740 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 9 4 25 6 At5g55800 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 9 4 25 7 At5g55970 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 9 4 25 8 At5g56020 expressed protein 9 4 25 9 At5g58600 "expressed protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 9 4 25 10 At5g58660 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to ACC oxidase, Lycopersicon esculentum [SP|P05116], gibberellin 3B-hydroxylase, Latuca sativa [gi:4164145]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 9 4 25 11 At5g58820 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] 9 4 25 12 At5g58880 hypothetical protein 9 4 25 13 At5g59040 copper transporter family protein similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family 9 4 25 14 At5g59080 expressed protein 9 4 25 15 At5g59230 transcription factor-related low similarity to transcription factor IIA large subunit [Arabidopsis thaliana] GI:2826884 9 4 25 16 At5g59290 UDP-glucuronic acid decarboxylase (UXS3) identical to UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] GI:14595666; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; identical to cDNA UDP-glucuronic acid decarboxylase (UXS3) GI:14595665 9 4 25 17 At5g61910 expressed protein 9 4 25 18 At5g61970 "signal recognition particle-related / SRP-related low similarity to Signal recognition particle 68 kDa protein (SRP68) from Homo sapiens SP|Q9UHB9, Canis familiaris SP|Q00004" 9 4 25 19 At5g62140 expressed protein 9 4 25 20 At5g62180 "expressed protein similar to PrMC3, Pinus radiata, GI:5487873" 9 4 25 21 At5g62360 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase from Arabidosis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 9 4 25 22 At5g62420 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155]; contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 9 4 25 23 At5g62575 expressed protein 9 4 25 24 At5g62620 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 9 4 25 25 At5g65180 "expressed protein contains Pfam domain, PF04818: Protein of unknown function, DUF618" 9 4 26 1 At5g65210 bZIP family transcription factor (TGA1) identical to transcription factor (TGA1) GI:16550 from [Arabidopsis thaliana] 9 4 26 2 At5g65380 "ripening-responsive protein, putative similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family" 9 4 26 3 At5g65430 "14-3-3 protein GF14 kappa (GRF8) identical to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from [Arabidopsis thaliana]" 9 4 26 4 At5g65590 Dof-type zinc finger domain-containing protein 9 4 26 5 At5g65650 expressed protein 9 4 26 6 At5g65800 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthases from Arabidopsis thaliana [GI:940370], Lycopersicon esculentum [GI:508609], Cucumis sativus [GI:3641649]" 9 4 26 7 At5g65860 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 9 4 26 8 ath-MIR157b miRNA gene Arabidopsis thaliana miR157b stem-loop 9 4 26 9 ath-MIR162b miRNA gene Arabidopsis thaliana miR162b stem-loop 9 4 26 10 ath-MIR169a miRNA gene Arabidopsis thaliana miR169a stem-loop 9 4 26 11 3xSSC 3xSSC 9 4 26 12 3xSSC 3xSSC 9 4 26 13 3xSSC 3xSSC 9 4 26 14 3xSSC 3xSSC 9 4 26 15 3xSSC 3xSSC 9 4 26 16 At3g44780 hypothetical protein 9 4 26 17 At3g44820 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 9 4 26 18 At3g44990 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative " 9 4 26 19 At3g45050 expressed protein 9 4 26 20 At3g45200 hypothetical protein 9 4 26 21 At3g45280 "syntaxin 72 (SYP72) identical to syntaxin of plants 72 (SYP72) (GI:13811650)[Arabidopsis thaliana]; identified as SYP72 in Sanderfoot, A.A., et al, Plant Physiology 124:1558-69(2000); syntaxin 8 - Homo sapiens, EMBL:AF115323" 9 4 26 22 At3g45460 hypothetical protein 9 4 26 23 At3g45525 hypothetical protein 9 4 26 24 Blank Blank 9 4 26 25 Blank Blank 10 1 1 1 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 10 1 1 2 At5g46430 60S ribosomal protein L32 (RPL32B) 10 1 1 3 Alien1 Control: Stratagene Spotreport Alien Oligo 10 1 1 4 Alien7 Control: Stratagene Spotreport Alien Oligo 10 1 1 5 atc03 Randomly generated negative control 10 1 1 6 atc09 Randomly generated negative control 10 1 1 7 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 10 1 1 8 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 10 1 1 9 At1g01010 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC domain protein NAM GB: AAD17313 GI:4325282 from [Arabidopsis thaliana] 10 1 1 10 At1g01070 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 10 1 1 11 At1g01200 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GB:D12541 GI:303736 from [Pisum sativum]" 10 1 1 12 At1g01250 "AP2 domain-containing transcription factor, putative similar to transcription factor TINY GB:CAA64359 GI:1246403 from [Arabidopsis thaliana]" 10 1 1 13 At1g01450 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 1 1 14 At1g01500 expressed protein identical to cDNA unknown protein GI:1922247 embY10087.1 10 1 1 15 At1g01670 U-box domain-containing protein 10 1 1 16 At1g01725 expressed protein 10 1 1 17 At1g04300 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471;contains Pfam PF00917: Meprin And TRAF-Homology (MATH) domain 10 1 1 18 At1g04370 "ethylene-responsive factor, putative Similar to Nicotiana EREBP-3 (gb|D38124)" 10 1 1 19 At1g04550 auxin-responsive protein / indoleacetic acid-induced protein 12 (IAA12) identical to SP|Q38830 Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) {Arabidopsis thaliana} 10 1 1 20 At1g04590 expressed protein isoform contains GG acceptor splice site at intron 7 10 1 1 21 At1g04750 synaptobrevin family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; 10 1 1 22 At1g04810 "26S proteasome regulatory subunit, putative contains similarity to 26S proteasome regulatory subunit S1 SP:O88761, GI:3288594 from [Rattus norvegicus]" 10 1 1 23 At1g04970 "lipid-binding serum glycoprotein family protein low similarity to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain" 10 1 1 24 At1g05000 "tyrosine specific protein phosphatase family protein contains tyrosine specific protein phosphatases active site, PROSITE:PS00383" 10 1 1 25 At1g07610 metallothionein-like protein 1C (MT-1C) identical to Metallothionein-like protein 1C (MT-1C). (SP:Q38804) (Arabidopsis thaliana) 10 1 2 1 At1g07660 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 10 1 2 2 At1g07780 phosphoribosylanthranilate isomerase 1 (PAI1) identical to gi:619751 10 1 2 3 At1g07820 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 10 1 2 4 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein similar to Surfeit locus protein 5 (SP:Q15528) {Homo sapiens} 10 1 2 5 At1g07980 histone-like transcription factor (CBF/NF-Y) family protein contains Pfam profile PF00808: Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to Chromatin accessibility complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo sapiens} 10 1 2 6 At1g08110 "lactoylglutathione lyase, putative / glyoxalase I, putative similar to lactoylglutathione lyase SP:O04885 from [Brassica juncea]" 10 1 2 7 At1g08140 "cation/hydrogen exchanger (CHX6a) Note: CHX6a and CHX6b were originally 1 gene but were split pased on alignments with other family members; may be a pseudogene and requires futher investigation; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 10 1 2 8 At1g10730 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 10 1 2 9 At1g10780 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 1 2 10 At1g10940 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK1 [Arabidopsis thaliana] SWISS-PROT:P43291" 10 1 2 11 At1g10990 expressed protein and genscan 10 1 2 12 At1g11170 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 10 1 2 13 At1g11230 hypothetical protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 10 1 2 14 At1g11380 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 10 1 2 15 At1g11420 agenet domain-containing protein contains Pfam PF05641: Agenet domain 10 1 2 16 At1g14205 ribosomal protein L18 family protein similar to SP|P09415 50S ribosomal protein L18 {Bacillus stearothermophilus} 10 1 2 17 At1g14250 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to SP|P97687 Ectonucleoside triphosphate diphosphohydrolase 1 (EC 3.6.1.5) (Ecto-apyrase) {Rattus norvegicus}; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 10 1 2 18 At1g14400 "ubiquitin-conjugating enzyme 1 (UBC1) E2; identical to gi:431259, SP:P25865" 10 1 2 19 At1g14450 expressed protein contains similarity to cytochrome c oxidase subunit I GI:5678701 from [Loligo pealei] 10 1 2 20 At1g14620 expressed protein 10 1 2 21 At1g14680 hypothetical protein 10 1 2 22 At1g14800 hypothetical protein 10 1 2 23 At1g14830 dynamin-like protein C (DL1C) nearly identical to dynamin-like protein C [Arabidopsis thaliana] GI:19569772 10 1 2 24 At1g17520 "DNA-binding protein, putative contains similarity to DNA-binding protein PcMYB1 [Petroselinum crispum] gi|2224899|gb|AAB61699" 10 1 2 25 At1g17580 "myosin, putative similar to myosin GI:433663 from (Arabidopsis thaliana)" 10 1 3 1 At1g17730 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 10 1 3 2 At1g17780 expressed protein 10 1 3 3 At1g17930 expressed protein similar to hypothetical protein GI:4559351 from [Arabidopsis thaliana] 10 1 3 4 At1g17980 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 10 1 3 5 At1g18190 expressed protein similar to golgin-84 {Homo sapiens} (GI:4191344) 10 1 3 6 At1g18260 suppressor of lin-12-like protein-related / sel-1 protein-related similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L)(SP:Q9UBV2) {Homo sapiens} 10 1 3 7 At1g21110 "O-methyltransferase, putative similar to GI:2781394" 10 1 3 8 At1g21170 expressed protein 10 1 3 9 At1g21350 expressed protein 10 1 3 10 At1g21400 "2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative similar to branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Gallus gallus] GI:12964598; contains Pfam profile PF00676: Dehydrogenase E1 component" 10 1 3 11 At1g21600 expressed protein similar to hypothetical protein GB:AAD41412 GI:5263310 from [Arabidopsis thaliana] 10 1 3 12 At1g21660 expressed protein low similarity to SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo sapiens}; supporting cDNA gi|20466222|gb|AY099577.1| 10 1 3 13 At1g21810 expressed protein 10 1 3 14 At1g21880 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 10 1 3 15 At1g24440 expressed protein similar to MTD2 [Medicago truncatula] GI:9294812 10 1 3 16 At1g24510 "T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 10 1 3 17 At1g24764 expressed protein 10 1 3 18 At1g24938 hypothetical protein 10 1 3 19 At1g25320 "leucine-rich repeat transmembrane protein kinase, putative similar to putative receptor-like protein kinase GI:4262228 from [Arabidopsis thaliana]" 10 1 3 20 At1g25375 metallo-beta-lactamase family protein 10 1 3 21 At1g25530 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 10 1 3 22 At1g25682 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] 10 1 3 23 At1g28710 "expressed protein similar to GI:2827651, GI:7527728, GI:4406788, GI:6063544, GI:10764853 from [Arabidopsis thaliana]" 10 1 3 24 At1g29020 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 10 1 3 25 At1g29195 expressed protein 10 1 4 1 At1g29260 peroxisomal targeting signal type 2 receptor (PEX7) identical to peroxisomal targeting signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis thaliana]; WD-40 repeat protein family member; contains 6 WD-40 repeats (PF00400); similar to peroxismal targeting signal 2 receptor (PTS2R) (Peroxin-7) (PEX7)(SP:O00628) [Homo sapiens] 10 1 4 2 At1g29410 "phosphoribosylanthranilate isomerase, putative strong similarity to GI:619749 from [Arabidopsis thaliana] (Plant Cell 7 (4), 447-461 (1995))" 10 1 4 3 At1g29460 "auxin-responsive protein, putative similar to auxin-induced protein 6B (SP:P33083) [Glycine max]" 10 1 4 4 At1g29640 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 10 1 4 5 At1g29710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 4 6 At1g32550 ferredoxin family protein similar to ferredoxin from Synechocystis sp. [GI:48019]; contains Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding domain 10 1 4 7 At1g32610 hydroxyproline-rich glycoprotein family protein 10 1 4 8 At1g32780 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase GB:CAA37333 GI:297178 from [Solanum tuberosum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 10 1 4 9 At1g32850 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 10 1 4 10 At1g33030 "O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase [SP|Q00763] [Populus tremuloides], catechol O-methyltransferase [GI:4808524][Thalictrum tuberosum]" 10 1 4 11 At1g33070 hypothetical protein 10 1 4 12 At1g33280 no apical meristem (NAM) family protein similar to CUC1 (GP:12060422) {Arabidopsis thaliana} amd to NAM (GP:1279640) {Petunia x hybrida} 10 1 4 13 At1g33340 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 10 1 4 14 At1g42470 patched family protein similar to SP|O15118 Niemann-Pick C1 protein precursor from Homo sapiens (GB:AAB63982) (GI:2276463); contains Pfam profile PF02460 Patched family 10 1 4 15 At1g42580 hypothetical protein contains similarity to hypothetical proteins 10 1 4 16 At1g43160 AP2 domain-containing protein RAP2.6 (RAP2.6) identical to AP2 domain containing protein RAP2.6 GI:2281637 from [Arabidopsis thaliana] 10 1 4 17 At1g43260 "hypothetical protein contains Pfam domain, PF04937: Protein of unknown function (DUF 659)" 10 1 4 18 At1g43667 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to Lipid transfer protein [Brassica rapa] GI:3062791, SP|P82353 Nonspecific lipid-transfer protein 2 (LTP 2) {Prunus armeniaca}; contains Pfam profile PF00234: Protease inhibitor/seed storage/LTP family" 10 1 4 19 At1g43720 hypothetical protein 10 1 4 20 At1g43940 hypothetical protein 10 1 4 21 At1g44010 hypothetical protein 10 1 4 22 At1g49110 hypothetical protein 10 1 4 23 At1g49170 expressed protein 10 1 4 24 At1g49350 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 10 1 4 25 At1g49410 expressed protein 10 1 5 1 At1g49610 F-box family protein contains F-box domain Pfam:PF00646 10 1 5 2 At1g49650 "cell death associated protein-related similar to PrMC3 [Pinus radiata] GI:5487873; weak similarity to cell death associated protein [Nicotiana tabacum] GI:7417008, hsr203J [Nicotiana tabacum] GI:22830761" 10 1 5 3 At1g49840 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 10 1 5 4 At1g49900 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 10 1 5 5 At1g52750 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 1 5 6 At1g52810 2-oxoglutarate-dependent dioxygenase-related similar to AOP1.2 [Arabidopsis thaliana] GI:16118887 10 1 5 7 At1g52950 replication protein-related low similarity to replication protein A1 GI:2258469 from (Oryza sativa) 10 1 5 8 At1g53010 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 1 5 9 At1g53165 "protein kinase, putative similar to serine/threonine protein kinase 24 [Homo sapiens] SWISS-PROT:Q9Y6E0" 10 1 5 10 At1g53230 TCP family transcription factor 3 (TCP3) identical to transcription factor 3 (TCP3) [Arabidopsis thaliana] (GI:3243274); similar to flower development protein cycloidea (cyc3) GI:6358611 from [Misopates orontium] 10 1 5 11 At1g53370 F-box family protein contains F-box domain Pfam:PF00646 10 1 5 12 At1g53440 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 10 1 5 13 At1g56040 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 10 1 5 14 At1g56085 hypothetical protein 10 1 5 15 At1g56240 SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 10 1 5 16 At1g56280 "drought-responsive family protein contains an AT-AC intron 3, potentially contains a frameshift. An alternate model provides a translation more consistent with homologous proteins but lacks the AT-AC intron; similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 10 1 5 17 At1g56460 PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam profile PF04795: PAPA-1-like conserved region 10 1 5 18 At1g56550 expressed protein 10 1 5 19 At1g57540 expressed protein contains similarity to T-box domain GI:5931592 from (Cynops pyrrhogaster) 10 1 5 20 At1g57570 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 10 1 5 21 At1g61440 "S-locus protein kinase, putative contains similarity to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 10 1 5 22 At1g61500 "S-locus protein kinase, putative similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 10 1 5 23 At1g61670 expressed protein similar to membrane protein PTM1 precursor isolog GI:1931644 from [Arabidopsis thaliana] 10 1 5 24 At1g61730 "DNA-binding storekeeper protein-related contains Pfam profile: PF04504 protein of unknown function, DUF573; similar to storekeeper protein GI:14268476 [Solanum tuberosum]" 10 1 5 25 At1g61900 expressed protein contains similarity to glutamic acid/alanine-rich protein GI:6707830 from [Trypanosoma congolense] 10 1 6 1 At1g61960 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 10 1 6 2 At1g62150 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 10 1 6 3 At1g62220 expressed protein 10 1 6 4 At1g64920 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 6 5 At1g64980 expressed protein 10 1 6 6 At1g65120 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 10 1 6 7 At1g65160 ubiquitin carboxyl-terminal hydrolase family protein contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 10 1 6 8 At1g65310 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana]" 10 1 6 9 At1g65360 MADS-box protein (AGL23) similar to MADS-box protein GI:2505875 from [Arabidopsis thaliana]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 10 1 6 10 At1g65540 calcium-binding EF hand family protein similar to leucine zipper-EF-hand containing transmembrane protein 1 [Homo sapiens] GI:4235226; contains Pfam profile PF00036: EF hand 10 1 6 11 At1g65610 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-1,4-beta-glucanase GI:2065530 from [Lycopersicon esculentum]" 10 1 6 12 At1g68350 hypothetical protein 10 1 6 13 At1g68410 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase-2C GB:AAC36697 from [Mesembryanthemum crystallinum] 10 1 6 14 At1g68570 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 1 6 15 At1g68600 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 10 1 6 16 At1g68780 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 10 1 6 17 At1g68830 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 1 6 18 At1g68980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 6 19 At1g69050 expressed protein 10 1 6 20 At1g71800 "cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton subunit GB:AAD47839 GI:5713194 from [Drosophila melanogaster], SP|P33240 Cleavage stimulation factor, 64 kDa subunit {Homo sapiens}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 10 1 6 21 At1g71860 protein tyrosine phosphatase 1 (PTP1) identical to protein tyrosine phosphatase 1 GI:3170531 from [Arabidopsis thaliana]; contains Pfam profile: PF00102 protein-tyrosine phosphatase 10 1 6 22 At1g72010 "TCP family transcription factor, putative PCF2 (GP:2580440) [Oryza sativa]" 10 1 6 23 At1g72050 "zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type" 10 1 6 24 At1g72210 basic helix-loop-helix (bHLH) family protein (bHLH096) identical to basic-helix-loop-helix transcription factor [Arabidopsis thaliana] GI:20520637; contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; PMID: 12679534 10 1 6 25 At1g72270 expressed protein 10 1 7 1 At1g72460 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profiles: PF00560 leucine rich repeat (5 copies), PF00069 eukaryotic protein kinase domain" 10 1 7 2 At1g72520 "lipoxygenase, putative similar to lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140 [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis thaliana]" 10 1 7 3 AT5G57480 PC-1 A03 10 1 7 4 3XSSC PC-1 A15 10 1 7 5 AT1G29930 PC-1 E03 10 1 7 6 3XSSC PC-1 E15 10 1 7 7 AT3G44150 PC-1 I03 10 1 7 8 3XSSC PC-1 I15 10 1 7 9 AT4G00810 PC-1 M03 10 1 7 10 3XSSC PC-1 M15 10 1 7 11 At1g75280 "isoflavone reductase, putative identical to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase" 10 1 7 12 At1g75350 ribosomal protein L31 family protein similar to SP:O46917 from [Guillardia theta] 10 1 7 13 At1g75520 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 10 1 7 14 At1g75590 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 10 1 7 15 At1g75790 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase 10 1 7 16 At1g75850 vacuolar protein sorting-associated protein 35 family protein / VPS35 family protein similar to vacuolar protein sorting 35 [Mus musculus] GI:11875394; contains Pfam profile PF03635: Vacuolar protein sorting-associated protein 35 10 1 7 17 At1g76030 vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit identical to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana} 10 1 7 18 At1g76060 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 10 1 7 19 At1g78720 "protein transport protein sec61, putative similar to SP|P38377 Protein transport protein Sec61 alpha subunit isoform 1 (Sec61 alpha- 1) {Canis familiaris}; contains Pfam profile PF00344: eubacterial secY protein" 10 1 7 20 At1g78780 pathogenesis-related family protein contains similarity to pathogen-related protein (GI:499073) (Swiss-Prot:P16273) [Hordeum vulgare] 10 1 7 21 At1g78895 expressed protein 10 1 7 22 At1g78940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 1 7 23 At1g79100 arginine/serine-rich protein-related similar to arginine/serine-rich protein [Arabidopsis thaliana] GI:6601502 10 1 7 24 At1g79150 expressed protein ; expression supported by MPSS 10 1 7 25 At1g79360 "transporter-related low similarity to SP|O76082 Organic cation/carnitine transporter 2 (Solute carrier family 22, member 5) (High-affinity sodium-dependent carnitine cotransporter) {Homo sapiens}; contains Pfam profile PF00083: major facilitator superfamily protein" 10 1 8 1 At1g79420 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 10 1 8 2 At2g01960 expressed protein 10 1 8 3 At2g02020 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 1 8 4 At2g02240 F-box family protein / SKP1 interacting partner 3-related 10 1 8 5 At2g02320 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 10 1 8 6 At2g02510 expressed protein 10 1 8 7 At2g02570 expressed protein 10 1 8 8 At2g02740 "transcription factor, putative similar to DNA-binding protein p24 [Solanum tuberosum] GI:9651810, Plant Transcriptional Regulator Pbf-2 [Solanum tuberosum] (GI:21730639, GI:21730638, GI:21730640, GI:21730637)" 10 1 8 9 At2g02795 hypothetical protein 10 1 8 10 At2g06050 "12-oxophytodienoate reductase (OPR3) / delayed dehiscence1 (DDE1) nearly identical to DELAYED DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314]; contains Pfam profile PF00724:oxidoreductase, FAD/FMN-binding; identical to cDNA OPDA-reductase homolog GI:5059114" 10 1 8 11 At2g06140 hypothetical protein 10 1 8 12 At2g06690 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 10 1 8 13 At2g06850 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (EXT) (EXGT-A1) identical to endo-xyloglucan transferase (ext) GI:469484 and endoxyloglucan transferase (EXGT-A1) GI:5533309 from [Arabidopsis thaliana] 10 1 8 14 At2g07170 expressed protein 10 1 8 15 At2g07280 hypothetical protein 10 1 8 16 At2g07776 hypothetical protein 10 1 8 17 At2g07673 hypothetical protein 10 1 8 18 At2g15130 plant basic secretory protein (BSP) family protein similar to NtPRp27 [Nicotiana tabacum] GI:5360263; contains Pfam profile PF04450: Plant Basic Secretory Protein 10 1 8 19 At2g15240 UNC-50 family protein contains Pfam profile PF05216: UNC-50 family; contains 5 transmembrane domains; similar to inner nuclear membrane RNA-binding protein unc-50 related protein (GI:2735550) [Rattus norvegicus] 10 1 8 20 At2g15390 "xyloglucan fucosyltransferase, putative (FUT4) identical to SP|Q9SJP2 Probable fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 10 1 8 21 At2g15450 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 10 1 8 22 At2g15610 expressed protein 10 1 8 23 At2g15680 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 10 1 8 24 At2g15900 "phox (PX) domain-containing protein weak similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain" 10 1 8 25 At2g16005 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 10 1 9 1 At2g18860 syntaxin family protein similar to Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1) (Swiss-Prot:Q946Y7) [Arabidopsis thaliana] 10 1 9 2 At2g18890 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 1 9 3 At2g19050 GDSL-motif lipase/hydrolase family protein low similarity to SP|P40603 Anter-specific proline-rich protein APG (Protein CEX) (Fragment) {Brassica napus}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 10 1 9 4 At2g19120 tRNA-splicing endonuclease positive effector-related similar to Endonuclease sen1 (Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar to tRNA-splicing endonuclease positive effector (Swiss-Prot:Q00416) [Saccharomyces cerevisiae] 10 1 9 5 At2g19320 expressed protein 10 1 9 6 At2g19390 expressed protein 10 1 9 7 At2g19570 cytidine deaminase (CDD) / cytidine aminohydrolase identical to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700 10 1 9 8 At2g19610 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 10 1 9 9 At2g22260 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 10 1 9 10 At2g22330 "cytochrome P450, putative similar to cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]" 10 1 9 11 At2g22510 "hydroxyproline-rich glycoprotein family protein similar to proline-rich cell wall protein [Gossypium barbadense] gi|451544|gb|AAA79364; contains proline-rich extensin domains, INTERPRO:IPR002965" 10 1 9 12 At2g22590 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 9 13 At2g22770 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 1 9 14 At2g22820 expressed protein prediced by genscan 10 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 10 1 9 16 At2g23010 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 10 1 9 17 At2g25850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain; identical to cDNA GI:31747890" 10 1 9 18 At2g25910 "3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein contains Pfam profiles PF01612: 3'-5' exonuclease, PF00013: KH domain" 10 1 9 19 At2g26080 "glycine dehydrogenase [decarboxylating], putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative strong similarity to SP|P26969 Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) {Pisum sativum}; contains Pfam profile PF02347: Glycine cleavage system P-protein" 10 1 9 20 At2g26140 "FtsH protease, putative contains similarity to YME1 GI:295582, a member of the ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding genes from [Saccharomyces cerevisiae]" 10 1 9 21 At2g26330 "leucine-rich repeat protein kinase, putative (ERECTA) identical to uncharacterized receptor protein kinase ERECTA [Arabidopsis thaliana] gi|1389566|dbj|BAA11869; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain" 10 1 9 22 At2g26390 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 10 1 9 23 At2g26550 heme oxygenase 2 (HO2) similar to heme oxygenase 2 [Arabidopsis thaliana] gi|4530595|gb|AAD22109 10 1 9 24 At2g26590 adhesion regulating molecule family similar to oocyte membrane protein (GI:6174842) [Xenopus laevis]; similar to Adhesion regulating molecule 1 precursor (110 kDa cell membrane glycoprotein) (Gp110) (Swiss-Prot:Q16186) [Homo sapiens]; contains Pfam PF04683: Adhesion regulating molecule conserved region 10 1 9 25 At2g29250 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 10 1 10 1 At2g29330 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 10 1 10 2 At2g29480 "glutathione S-transferase, putative similar to Glutathione S-Transferase [Arabidopsis thaliana] gi:940381|16226389|gb|AF428387." 10 1 10 3 At2g29525 expressed protein 10 1 10 4 At2g29670 expressed protein 10 1 10 5 At2g29720 "monooxygenase family protein nearly identical to CTF2B [GI:4164578][Plant Physiol. 119, 364 (1999), PGR99-008]" 10 1 10 6 At2g29900 presenilin family protein similar to presenilin [Drosophila melanogaster] GI:2062395; contains Pfam profile PF01080: Presenilin 10 1 10 7 At2g29930 F-box family protein contains F-box domain Pfam:PF00646 10 1 10 8 At2g32580 expressed protein 10 1 10 9 At2g32640 expressed protein 10 1 10 10 At2g32765 small ubiquitin-like modifier 5 (SUMO) similar to ubiquitin-like protein SMT3 SP:P55852 [Arabidopsis thaliana]; contains INTERPRO:IPR000626 ubiquitin domain; contains Pfam profile PF00240: Ubiquitin family; contains Pfam profile PF00240: Ubiquitin family; identical to cDNA small ubiquitin-like modifier 5 (SUMO) mRNA GI:22652847 10 1 10 11 At2g32810 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase GI:7939617 from [Lycopersicon esculentum]" 10 1 10 12 At2g32960 tyrosine specific protein phosphatase family protein contains Pfam profile PF03162: Putative tyrosine phosphatase family 10 1 10 13 At2g33020 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 10 1 10 14 At2g33205 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 10 1 10 15 At2g33255 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 10 1 10 16 At2g35800 "mitochondrial substrate carrier family protein contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain" 10 1 10 17 At2g35860 beta-Ig-H3 domain-containing protein / fasciclin domain-containing protein contains Pfam profile PF02469: Fasciclin domain 10 1 10 18 At2g36010 E2F transcription factor-3 (E2F3) identical to E2F transcription factor-3 E2F3 [Arabidopsis thaliana] gi|10443853|gb|AAG17610 10 1 10 19 At2g36060 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 10 1 10 20 At2g36230 N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase identical to N'-5'-phosphoribosyl-formimino-5-aminoimidazole- 4-carboxamide ribonucleotide isomerase GI:3449284 from [Arabidopsis thaliana]; contains Pfam profile: PF00977 histidine biosynthesis protein 10 1 10 21 At2g36290 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase [Rhodococcus sp. RHA1] GI:8978311; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 1 10 22 At2g36420 expressed protein 10 1 10 23 At2g36480 "zinc finger (C2H2-type) family protein weak similarity to S-locus protein 4 (GI:6069478) [Brassica rapa]; weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens]; contains Prosite PS00028: Zinc finger, C2H2 type, domain" 10 1 10 24 At2g39060 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 10 1 10 25 At2g39130 "amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 10 1 11 1 At2g39300 expressed protein ; expression supported by MPSS 10 1 11 2 At2g39360 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 1 11 3 At2g39510 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 10 1 11 4 At2g39570 ACT domain-containing protein contains Pfam ACT domain PF01842 10 1 11 5 At2g39725 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 10 1 11 6 At2g39750 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 10 1 11 7 At2g42230 tubulin-specific chaperone C-related weak similarity to Tubulin-specific chaperone C (Tubulin-folding cofactor C) (CFC) (Swiss-Prot:Q15814) [Homo sapiens] 10 1 11 8 At2g42280 basic helix-loop-helix (bHLH) family protein 10 1 11 9 At2g42430 LOB domain protein 16 / lateral organ boundaries domain protein 16 (LBD16) identical to LOB DOMAIN 16 [Arabidopsis thaliana] GI:17227162 10 1 11 10 At2g42490 "copper amine oxidase, putative similar to copper methylamine oxidase precursor (MAOXII) [Arthrobacter sp.] SWISS-PROT:Q07123" 10 1 11 11 At2g42610 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 10 1 11 12 At2g42670 expressed protein 10 1 11 13 At2g42840 protodermal factor 1 (PDF1) identical to protodermal factor 1 [Arabidopsis thaliana] gi|4929130|gb|AAD33869 10 1 11 14 At2g42890 RNA recognition motif (RRM)-containing protein 10 1 11 15 At2g45570 "cytochrome P450 76C2, putative (CYP76C2) (YLS6) identical to SP|O64637 Cytochrome P450 76C2 (EC 1.14.-.-) {Arabidopsis thaliana}, cDNA YLS6 mRNA for cytochrome P450 (CYP76C2), partial cds GI:13122289" 10 1 11 16 At2g45630 "oxidoreductase family protein low similarity to SP|P36234 Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) {Hyphomicrobium methylovorum}; contains Pfam profile PF00389: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain" 10 1 11 17 At2g45770 "signal recognition particle receptor protein, chloroplast (FTSY) similar to Cell division protein ftsY homolog (SP:O67066) {Aquifex aeolicus}; contains Pfam PF00448: SRP54-type protein, GTPase domain contains TIGRFAM TIGR00064: signal recognition particle-docking protein FtsY contains Pfam PF02881: SRP54-type protein, helical bundle domain; identical to cDNA chloroplast FtsY homolog GI:4583547" 10 1 11 18 At2g45830 expressed protein 10 1 11 19 At2g46000 expressed protein 10 1 11 20 At2g46060 transmembrane protein-related contains weak similarity to Swiss-Prot:Q9HCN3 transmembrane protein 8 precursor (M83 protein) [Homo sapiens] 10 1 11 21 At2g46210 "delta-8 sphingolipid desaturase, putative similar to delta-8 sphingolipid desaturase GI:3819708 from [Brassica napus]" 10 1 11 22 At2g46260 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 10 1 11 23 At3g01590 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044 Pfam profile PF01263: Aldose 1-epimerase 10 1 11 24 At3g01630 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 10 1 11 25 At3g01800 "ribosome recycling factor family protein / ribosome releasing factor family protein similar to SP|P82231 Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) {Spinacia oleracea}; contains Pfam profile PF01765: ribosome recycling factor" 10 1 12 1 At3g01830 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]; Pfam HMM hit: EF hand" 10 1 12 2 At3g01980 "short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profiles: PF00106 short chain dehydrogenase, PF00678 short chain dehydrogenase/reductase C-terminus" 10 1 12 3 At3g02030 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family; contains non-consensus splice site (GC) at intron 10" 10 1 12 4 At3g02180 expressed protein 10 1 12 5 At3g02200 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 10 1 12 6 At3g04830 expressed protein 10 1 12 7 At3g04880 DNA-damage-repair/toleration protein (DRT102) identical to DNA-damage-toleration protein DRT102 SP:Q05212 from [Arabidopsis thaliana]; contains Pfam profile: PF02502 ribose/galactose isomerase 10 1 12 8 At3g05050 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 10 1 12 9 At3g05100 expressed protein 10 1 12 10 At3g05260 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 10 1 12 11 At3g05320 expressed protein 10 1 12 12 At3g05500 rubber elongation factor (REF) family protein contains Pfam profile: PF05755 rubber elongation factor protein (REF) 10 1 12 13 At3g05540 translationally controlled tumor family protein similar to translationally controlled tumor protein GB:AAD10032 from [Hevea brasiliensis] 10 1 12 14 At3g07970 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase precursor [Cucumis melo] GI:3320462; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases); contains non-consensus AA donor splice site at exon 2" 10 1 12 15 At3g08030 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 10 1 12 16 At3g08610 expressed protein 10 1 12 17 At3g08670 expressed protein 10 1 12 18 At3g08850 "transducin family protein / WD-40 repeat family protein similar to WD-repeat protein mip1 (SP:P87141) [Schizosaccharomyces pombe]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 1 weak)" 10 1 12 19 At3g08900 reversibly glycosylated polypeptide-3 (RGP3) nearly identical to reversibly glycosylated polypeptide-3 [Arabidopsis thaliana] GI:11863238; contains non-consensus GA-donor splice site at intron 2 10 1 12 20 At3g09030 potassium channel tetramerisation domain-containing protein contains Pfam profile PF02214: K+ channel tetramerisation domain 10 1 12 21 At3g09070 glycine-rich protein similar to hypothetical protein GB:AAD32765 [Arabidopsis thaliana] 10 1 12 22 At3g11560 expressed protein 10 1 12 23 At3g11590 expressed protein 10 1 12 24 At3g11750 "dihydroneopterin aldolase, putative similar to SP|P28823 Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) {Bacillus subtilis}; contains Pfam profile PF02152: dihydroneopterin aldolase" 10 1 12 25 At3g11820 "syntaxin 121 (SYP121) / syntaxin-related protein (SYR1) contains Pfam profiles: PF00804 syntaxin and PF05739: SNARE domain; identical to cDNA syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788, SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 10 1 13 1 At3g11930 universal stress protein (USP) family protein similar to ER6 protein GB:AAD46412 GI:5669654 from [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 10 1 13 2 At3g11960 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein similar to Splicing factor 3B subunit 3 (Spliceosome associatedprotein 130) (SAP 130) (SF3b130) (Pre-mRNA splicing factor SF3b 130kDa subunit) (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF A subunit region 10 1 13 3 At3g12110 actin 11 (ACT11) identical to SP|P53496 Actin 11 {Arabidopsis thaliana} 10 1 13 4 At3g12160 Ras-related GTP-binding family protein similar to ras-related GTP-binding protein RGP1 SP:P25766 from [Oryza sativa];contains Pfam profile: PF00071 Ras family 10 1 13 5 At3g14580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 13 6 At3g14630 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 10 1 13 7 At3g14810 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 10 1 13 8 At3g14850 expressed protein 10 1 13 9 At3g14970 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 1 13 10 At3g15010 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 10 1 13 11 At3g15160 expressed protein 10 1 13 12 At3g15220 "protein kinase, putative similar to serine/threonine protein kinase 24 [Homo sapiens] SWISS-PROT:Q9Y6E" 10 1 13 13 At3g17790 acid phosphatase type 5 (ACP5) contains Pfam profile: PF00149 calcineurin-like phosphoesterase; nearly identical to acid phosphatase type 5 (GI:10278031) [Arabidopsis thaliana] 10 1 13 14 At3g17850 "protein kinase, putative similar to IRE (incomplete root hair elongation) [Arabidopsis thaliana] gi|6729346|dbj|BAA89783; contains protein kinase domain Pfam:PF00069" 10 1 13 15 At3g18040 "mitogen-activated protein kinase, putative / MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis thaliana] gi|7106544|dbj|BAA92223; mitogen-activated protein kinase (MAPK), PMID:12119167; similar to blast and wounding induced mitogen-activated protein kinase (BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 10 1 13 16 At3g18100 myb family transcription factor (MYB4R1) contains Pfam profile: PF00249 Myb-like DNA-binding domain 10 1 13 17 At3g18240 expressed protein 10 1 13 18 At3g18295 expressed protein 10 1 13 19 At3g18450 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 10 1 13 20 At3g18500 nocturnin-related contains weak similarity to Nocturnin (CCR4 protein homolog) (Swiss-Prot:O35710) [Mus musculus] 10 1 13 21 At3g21190 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 10 1 13 22 At3g21240 4-coumarate--CoA ligase 2 / 4-coumaroyl-CoA synthase 2 (4CL2) identical to SP|Q9S725 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) {Arabidopsis thaliana} 10 1 13 23 At3g21410 F-box family protein (FBW1) contains similarity to F-box domain IPR:001810; 10 1 13 24 At3g21470 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 1 13 25 At3g21610 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 10 1 14 1 At3g21670 nitrate transporter (NTP3) nearly identical to nitrate transporter [Arabidopsis thaliana] GI:4490323; contains Pfam profile: PF00854 POT family 10 1 14 2 At3g21800 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 14 3 At3g21860 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At10), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1b GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 10 1 14 4 At3g24560 expressed protein contains Pfam profile PF01171: PP-loop family 10 1 14 5 At3g24620 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315); expression supported by MPSS 10 1 14 6 At3g24790 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 1 14 7 At3g24850 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 10 1 14 8 At3g25110 acyl-[acyl carrier protein] thioesterase / acyl-ACP thioesterase / oleoyl-[acyl-carrier protein] hydrolase / S-acyl fatty acid synthase thioesterase identical to acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana] GI:804946 10 1 14 9 At3g25165 rapid alkalinization factor (RALF) family protein 10 1 14 10 At3g25420 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) from [Oryza sativa] 10 1 14 11 At3g25490 "wall-associated kinase, putative similar to wall-associated kinase 4 GB:CAA08793 from [Arabidopsis thaliana]" 10 1 14 12 At3g28100 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575 10 1 14 13 At3g28140 calmodulin-binding protein 10 1 14 14 At3g28330 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 10 1 14 15 At3g28380 "P-glycoprotein, putative similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare]" 10 1 14 16 At3g28560 hypothetical protein similar to mitochondrial protein-like protein (GI:11559424) [Cucumis sativus] 10 1 14 17 At3g28620 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 1 14 18 At3g28790 expressed protein 10 1 14 19 At3g28857 expressed protein 10 1 14 20 At3g42628 phosphoenolpyruvate carboxylase-related / PEP carboxylase-related identical to phosphoenolpyruvate carboxylase [Arabidopsis thaliana] GP:26800701 over first 45 residues 10 1 14 21 At3g42690 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At2g11345, At4g04130" 10 1 14 22 At3g42860 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 10 1 14 23 At3g42950 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase precursor [Cucumis melo] GI:3320460; contains PF00295: Glycosyl hydrolases family 28 10 1 14 24 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain 10 1 14 25 At3g43300 guanine nucleotide exchange family protein similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 {Homo sapiens}; contains Pfam profile PF01369: Sec7 domain 10 1 15 1 At3g43500 hypothetical protein 10 1 15 2 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 10 1 15 3 At3g46510 "armadillo/beta-catenin repeat family protein / U-box domain-containing family protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 10 1 15 4 At3g46570 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 10 1 15 5 At3g46750 hypothetical protein 10 1 15 6 At3g46810 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 1 15 7 At3g46990 hypothetical protein contains Pfam profile PF05340: Protein of unknown function (DUF740) 10 1 15 8 At3g47050 "glycosyl hydrolase family 3 protein beta-D-glucan exohydrolase, Nicotiana tabacum, TREMBL:AB017502_1" 10 1 15 9 At3g47230 expressed protein 10 1 15 10 At3g47270 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At3g30450, At4g03990, At5g34895, At2g02200" 10 1 15 11 At3g50060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA MYB-related protein (1107 bp) GI:1263096 10 1 15 12 At3g50120 expressed protein contains Pfam profile PF03140: Plant protein of unknown function; expression supported by MPSS 10 1 15 13 At3g50280 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus, PIR:T10717 [gi:2239091]; contains Pfam transferase family domain PF002458" 10 1 15 14 At3g50350 expressed protein 10 1 15 15 At3g50520 phosphoglycerate/bisphosphoglycerate mutase family protein similar to SP|P00950 Phosphoglycerate mutase 1 (EC 5.4.2.1) {Saccharomyces cerevisiae}; contains Pfam profile PF00300: phosphoglycerate mutase family 10 1 15 16 At3g50560 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 10 1 15 17 At3g50740 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 15 18 At3g50800 expressed protein 10 1 15 19 At3g53410 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain: PF00097: Zinc finger, C3HC4 type (RING finger)" 10 1 15 20 At3g53450 hypothetical protein contains Pfam profile PF03641: decarboxylase family protein 10 1 15 21 At3g53580 diaminopimelate epimerase family protein contains Pfam profile PF01678: Diaminopimelate epimerase 10 1 15 22 At3g53620 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative similar to magnesium dependent soluble inorganic pyrophosphatase [Solanum tuberosum] GI:2706450; contains Pfam profile PF00719: inorganic pyrophosphatase" 10 1 15 23 At3g53780 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 10 1 15 24 At3g53830 regulator of chromosome condensation (RCC1) family protein / UVB-resistance protein-related contains Pfam PF00415 : Regulator of chromosome condensation (RCC1); similar to UVB-resistance protein UVR8 (GIi;10177674) [Arabidopsis thaliana] 10 1 15 25 At3g53980 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 1 16 1 At3g54000 expressed protein 10 1 16 2 At3g56770 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 1 16 3 At3g56830 expressed protein contains Pfam profile PF04483: Protein of unknown function (DUF565) 10 1 16 4 At3g57000 nucleolar essential protein-related contains weak similarity to Nucleolar essential protein 1 (Essential for mitotic growth 1) (Swiss-Prot:Q06287) [Saccharomyces cerevisiae] 10 1 16 5 At3g57060 "non-SMC condensin subunit, XCAP-D2/Cnd1 family protein similar to 13S condensin XCAP-D2 subunit [Xenopus laevis] GI:3764087; contains Pfam profile PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1" 10 1 16 6 At3g57240 "beta-1,3-glucanase (BG3) almost identical to beta-1,3-glucanase GI:553038 from [Arabidopsis thaliana]" 10 1 16 7 At3g57300 "transcriptional activator, putative similar to transcriptional activator SRCAP [Homo sapiens] GI:5106572; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 10 1 16 8 At3g57440 hypothetical protein 10 1 16 9 At3g57500 hypothetical protein 10 1 16 10 At3g60260 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 10 1 16 11 At3g60320 "expressed protein contains Pfam profiles: PF04782: protein of unknown function (DUF632), PF04783: protein of unknown function (DUF630)" 10 1 16 12 At3g60480 expressed protein 10 1 16 13 At3g60540 sec61beta family protein similar to SP|P52870 Protein transport protein SEC61 beta 1 subunit {Saccharomyces cerevisiae}; contains Pfam profile PF03911: Sec61beta family 10 1 16 14 At3g60700 expressed protein 10 1 16 15 At3g60760 hypothetical protein 10 1 16 16 At3g60920 "beige/BEACH domain-containing protein contains Pfam PF02138: Beige/BEACH domain; similar to LBA isoform gamma (GI:10257405) [Mus musculus]; similar to beige-like protein (CDC4L) - Homo sapiens; similar to Neurobeachin: kinase A-anchoring, beige/Chediak-higashi protein homolog implicated in neuronal membrane traffic (AKAP550) (GI:11863541) [Drosophila melanogaster]." 10 1 16 17 At3g60980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 16 18 At4g00130 "hypothetical protein contains Pfam profile PF04504: Protein of unknown function, DUF573" 10 1 16 19 At4g00180 axial regulator YABBY3 (YABBY3) identical to YABBY3 [Arabidopsis thaliana] GI:4928753 10 1 16 20 At4g00310 expressed protein 10 1 16 21 At4g00335 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 1 16 22 At4g00440 expressed protein 10 1 16 23 At4g00510 cyclic nucleotide-binding domain-containing protein contains Pfam profile: PF00027 cyclic nucleotide-binding domain 10 1 16 24 At4g00620 "tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P07245 C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" 10 1 16 25 At4g00660 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicases" 10 1 17 1 At4g03156 small GTPase-related contains weak similarity to Swiss-Prot:Q96283 ras-related protein Rab11A [Arabidopsis thaliana] 10 1 17 2 At4g03190 F-box family protein (FBL18) almost identical to GRR1-like protein 1 GI:12658970 from [Arabidopsis thaliana]; similar to leucine-rich repeats containing F-box protein FBL3 (GI:5919219) [Homo sapiens]; similar to F-box protein FBL2 (GI:6063090) [Homo sapiens] 10 1 17 3 At4g03320 chloroplast protein import component-related similar to P. sativum Tic20 chloroplast protein import component (GI:3769673) 10 1 17 4 At4g03380 expressed protein 10 1 17 5 At4g03510 zinc finger (C3HC4-type RING finger) family protein (RMA1) identical to RING zinc finger protein RMA1 gi:3164222 10 1 17 6 At4g03570 hypothetical protein 10 1 17 7 At4g03930 "pectin methylesterase, putative similar to pectin methylesterase GI:1617588 from [Lycopersicon esculentum]" 10 1 17 8 At4g03975 hypothetical protein 10 1 17 9 At4g08730 hypothetical protein 10 1 17 10 At4g08790 "nitrilase, putative similar to nitrilase 1 [Mus musculus] GI:3228668; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 10 1 17 11 At4g08930 thioredoxin-related contains weak similarity to Swiss-Prot:Q39239 thioredoxin H-type 4 (TRX-H-4). [Mouse-ear cress] 10 1 17 12 At4g09000 "14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) identical to 14-3-3 protein GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis thaliana]" 10 1 17 13 At4g09190 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to Probable disease resistance RPP8-like protein 2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana] 10 1 17 14 At4g09280 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 10 1 17 15 At4g09500 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 17 16 At4g09520 "2,3-biphosphoglycerate-independent phosphoglycerate mutase family protein / phosphoglyceromutase family protein contains similarity to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1). (Swiss-Prot:Q59007) [Methanococcus jannaschii]; contains weak hit to Pfam profile PF01676: Metalloenzyme superfamily" 10 1 17 17 At4g12290 "copper amine oxidase, putative similar to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855" 10 1 17 18 At4g12350 "transcription factor, putative (MYB42) identical to cDNA putative transcription factor (MYB42) GI:5823330" 10 1 17 19 At4g12510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 14 kDa polypeptide [Catharanthus roseus] GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 1 17 20 At4g12560 F-box family protein contains F-box domain Pfam:PF00646 10 1 17 21 At4g12740 adenine-DNA glycosylase-related / MYH-related similar to MYH (GI:18845094) [Rattus norvegicus]; similar to adenine-DNA glycosylase (GI:12656850) [Mus musculus]; contains TIGRFAM profile TIGR01084: A/G-specific adenine glycosylase (hits below the trusted cutoff) 10 1 17 22 At4g12790 "ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein" 10 1 17 23 At4g12970 expressed protein 10 1 17 24 At4g13030 expressed protein 10 1 17 25 At4g15410 UBX domain-containing protein low similarity to XY40 protein [Rattus norvegicus] GI:2547025; contains Pfam profile PF00789: UBX domain 10 1 18 1 At4g15450 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 10 1 18 2 At4g15610 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 10 1 18 3 At4g15670 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 10 1 18 4 At4g15802 expressed protein contains non-consensus AT-AC splice sites at intron 4 10 1 18 5 At4g15870 terpene synthase/cyclase family protein 10 1 18 6 At4g16030 "60S ribosomal protein L19, putative similar to 60S ribosomal protein L19-3 (Swiss-Prot:P49693) [Arabidopsis thaliana]" 10 1 18 7 At4g16080 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 10 1 18 8 At4g18530 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 10 1 18 9 At4g18580 expressed protein 10 1 18 10 At4g18740 expressed protein 10 1 18 11 At4g18780 "cellulose synthase, catalytic subunit (IRX1) nearly identical to gi:12836997" 10 1 18 12 At4g18950 "ankyrin protein kinase, putative similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674" 10 1 18 13 At4g19000 IWS1 C-terminus family protein contains Pfam profile PF05909: IWS1 C-terminus 10 1 18 14 At4g19110 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 10 1 18 15 At4g19160 expressed protein 10 1 18 16 At4g21990 5'-adenylylsulfate reductase (APR3) / PAPS reductase homolog (PRH26) identical to 5'-adenylylsulfate reductase [Arabidopsis thaliana] GI:2738760; identical to cDNA PAPS reductase homolog (PRH26) GI:1710113 10 1 18 17 At4g22070 WRKY family transcription factor identical to WRKY transcription factor 31 (WRKY31) GI:15990589 from [Arabidopsis thaliana] 10 1 18 18 At4g22212 expressed protein 10 1 18 19 At4g22230 expressed protein 10 1 18 20 At4g22360 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 10 1 18 21 At4g22420 "expressed protein predicted protein, Arabidopsis thaliana" 10 1 18 22 At4g22610 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 1 18 23 At4g22670 "tetratricopeptide repeat (TPR)-containing protein similar to Hsc70-interacting protein (Hip) from {Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain" 10 1 18 24 At4g25230 "zinc finger (C3HC4-type RING finger) family protein similar to autocrine motility factor receptor [Mus musculus] GI:5931953; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF02845: CUE domain" 10 1 18 25 At4g25290 "deoxyribodipyrimidine photolyase family protein / DNA photolyase family protein contains Pfam domain, PF00875: deoxyribodipyrimidine photolyase" 10 1 19 1 At4g25430 hypothetical protein 10 1 19 2 At4g25480 "DRE-binding protein (DREB1A) / CRT/DRE-binding factor 3 (CBF3) identical to DREB1A GI:3738224 from [Arabidopsis thaliana], DREB1A [Arabidopsis thaliana] GI:3660548, CRT/DRE binding factor 3 [Arabidopsis thaliana] GI:4091983; contains Pfam profile PF00847: AP2 domain; identical to cDNA CRT/DRE binding factor 3 (CBF3) GI:4322229" 10 1 19 3 At4g25640 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 10 1 19 4 At4g25690 expressed protein 10 1 19 5 At4g25850 oxysterol-binding family protein contains Pfam profile PF01237: Oxysterol-binding protein 10 1 19 6 At4g25910 "nitrogen fixation protein, putative nitrogen fixation protein nifU (SP:Q43885) [Anabaena sp.]; contains Pfam profile: PF01106 NifU-like domain" 10 1 19 7 At4g28420 "aminotransferase, putative tsimilar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 10 1 19 8 At4g28480 DNAJ heat shock family protein contains Pfam profile PF00226: DnaJ domain; ; similar to DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) (Heat shock protein 40) (HSP40) (DnaJ protein homolog 1) (HDJ-1) (Swiss-Prot:P25685) [Homo sapiens] and (Swiss-Prot:Q9QYJ3) [Mus musculus] 10 1 19 9 At4g28630 ABC transporter family protein identical to half-molecule ABC transporter ATM1 GI:9964117 from [Arabidopsis thaliana] 10 1 19 10 At4g28690 expressed protein 10 1 19 11 At4g28830 expressed protein 10 1 19 12 At4g28890 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 1 19 13 At4g29070 expressed protein 10 1 19 14 At4g29130 hexokinase 1 (HXK1) identical to hexokinase 1 [Arabidopsis thaliana] Swiss-Prot:Q42525 10 1 19 15 At4g31700 "40S ribosomal protein S6 (RPS6A) ribosomal protein S6, Arabidopsis thaliana, PID:g2662469" 10 1 19 16 At4g31740 hypothetical protein weak similarity to r-sly1 [Rattus norvegicus] GI:1144569 10 1 19 17 At4g31870 "glutathione peroxidase, putative glutathione peroxidase, Arabidopsis thaliana, PIR2:S71250" 10 1 19 18 At4g31910 "transferase family protein low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase Dianthus caryophyllus GI:3288180, 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata GI:6746554; contains Pfam profile PF02458 transferase family" 10 1 19 19 At4g32050 neurochondrin family protein contains Pfam PF05536: Neurochondrin 10 1 19 20 At4g32105 expressed protein 10 1 19 21 At4g32285 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related Aux22d, Vigna radiata, PID:D1021691; contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis]" 10 1 19 22 At4g32340 expressed protein 10 1 19 23 AT5G57480 PC-1 A03 10 1 19 24 3XSSC PC-1 A15 10 1 19 25 AT1G29930 PC-1 E03 10 1 20 1 3XSSC PC-1 E15 10 1 20 2 AT3G44150 PC-1 I03 10 1 20 3 3XSSC PC-1 I15 10 1 20 4 AT4G00810 PC-1 M03 10 1 20 5 3XSSC PC-1 M15 10 1 20 6 At4g34880 amidase family protein similar to peptide amidase [Stenotrophomonas maltophilia] GI:19744118; contains Pfam profile PF01425: Amidase 10 1 20 7 At4g34940 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 10 1 20 8 At4g35100 plasma membrane intrinsic protein (SIMIP) nearly identical to plasma membrane intrinsic protein [Arabidopsis thaliana] GI:2306917 10 1 20 9 At4g35150 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase, Pinus taeda, gb:U39301" 10 1 20 10 At4g35300 transporter-related low similarity to hexose transporter [Solanum tuberosum] GI:8347246; contains Pfam profile PF00083: major facilitator superfamily protein 10 1 20 11 At4g35350 "cysteine endopeptidase, papain-type (XCP1) identical to papain-type cysteine endopeptidase XCP1 GI:6708181 from [Arabidopsis thaliana]" 10 1 20 12 At4g35500 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 1 20 13 At4g35540 "expressed protein transcription factor IIIB chain BRF1, Saccharomycescerevisiae, PIR2:A44072" 10 1 20 14 At4g38210 "expansin, putative (EXP20) similar to alpha-expansin 3 GI:6942322 from [Triphysaria versicolor]; alpha-expansin gene family, PMID:11641069" 10 1 20 15 At4g38225 expressed protein 10 1 20 16 At4g38390 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 10 1 20 17 At4g38460 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative 65% similar to geranylgeranyl pyrophosphate synthase [GI:413730];" 10 1 20 18 At4g38620 myb family transcription factor (MYB4) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 1 20 19 At4g38680 cold-shock DNA-binding family protein contains Pfam domains PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle 10 1 20 20 At4g38860 "auxin-responsive protein, putative auxin-induced protein 10A, Glycine max., PIR2:JQ1099" 10 1 20 21 At4g38900 "bZIP protein vsf-1 protein, Lycopersicon esculentum, PIR2:S52203" 10 1 20 22 At5g02310 "eceriferum3 protein, putative similar to eceriferum3 GI:1669655 from [Arabidopsis thaliana]" 10 1 20 23 At5g02370 "kinesin motor protein-related kinesin, Xenopus laevis, EMBL:XLA249840" 10 1 20 24 At5g02520 expressed protein 10 1 20 25 At5g02580 expressed protein 10 1 21 1 At5g02720 "expressed protein predicted protein, Arabidopsis thaliana" 10 1 21 2 At5g02760 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 10 1 21 3 At5g02920 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 10 1 21 4 At5g02980 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 10 1 21 5 At5g05670 expressed protein 10 1 21 6 At5g05720 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 1 21 7 At5g05880 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 21 8 At5g05930 guanylyl cyclase-related (GC1) similar to guanylyl cyclase (GC1) GI:21436486 from [Arabidopsis thaliana]; identical to cDNA putative guanylate cyclase GI:21436486 10 1 21 9 At5g06080 LOB domain protein 33 / lateral organ boundaries domain protein 33 (LBD33) identical to SP|Q9LHS8 LOB domain protein 33 {Arabidopsis thaliana} 10 1 21 10 At5g06130 chaperone protein dnaJ-related similar to unknown protein (pir||T00468); contains Pfam PF00684 : DnaJ central domain (4 repeats) 10 1 21 11 At5g06260 nucleolar protein-related contains weak similarity to nucleolar protein C7C (GI:13540302) [Rattus norvegicus] 10 1 21 12 At5g06300 lysine decarboxylase family protein contains Pfam profile PF03641: lysine decarboxylase family 10 1 21 13 At5g09380 DNA-directed RNA polymerase III RPC4 family protein low similarity to SP|P25441 DNA-directed RNA polymerase III 47 kDa polypeptide (EC 2.7.7.6) (C53) (RNA polymerase C subunit 4) {Saccharomyces cerevisiae}; contains Pfam profile PF05132: RNA polymerase III RPC4 10 1 21 14 At5g09440 "phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region" 10 1 21 15 At5g09620 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein predicted proteins, Arabidopsis thaliana and Drosophila melanogaster contains Pfam profile PF00564: PB1 domain" 10 1 21 16 At5g09680 "cytochrome b5 domain-containing protein flavohemoprotein b5+b5R, Homo sapiens, EMBL:AF169803" 10 1 21 17 At5g09850 transcription elongation factor-related low similarity to SP|P10712 Transcription elongation factor S-II (Transcription elongation factor A) {Mus musculus} 10 1 21 18 At5g09900 "26S proteasome regulatory subunit, putative (RPN5) p55 protein-like" 10 1 21 19 At5g10040 expressed protein 10 1 21 20 At5g10080 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 10 1 21 21 At5g13220 expressed protein 10 1 21 22 At5g13280 aspartate kinase identical to aspartate kinase [Arabidopsis thaliana] GI:4376158 10 1 21 23 At5g13440 "ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative similar to ubiquinol--cytochrome-c reductase from Solanum tuberosum [SP|P37841], Nicotiana tabacum [SP|P51132] [SP|P51133]" 10 1 21 24 At5g13500 "expressed protein predicted protein At2g25260 - Arabidopsis thaliana, EMBL:AC007070" 10 1 21 25 At5g13640 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to SP|P40345 Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158) (PDAT) {Saccharomyces cerevisiae}; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 10 1 22 1 At5g13690 alpha-N-acetylglucosaminidase family / NAGLU family contains Pfam profile: PF05089 alpha-N-acetylglucosaminidase (NAGLU) 10 1 22 2 At5g13850 "nascent polypeptide-associated complex (NAC) domain-containing protein similar to alpha-NAC, non-muscle form [Mus musculus] GI:1666690; contains Pfam profile PF01849: NAC domain" 10 1 22 3 At5g13910 "AP2/EREBP-like transcription factor LEAFY PETIOLE, putative nearly identical to AP2/EREBP-like transcription factor LEAFY PETIOLE [Arabidopsis thaliana] GI:6942018" 10 1 22 4 At5g16660 expressed protein 10 1 22 5 At5g16720 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 10 1 22 6 At5g16860 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 22 7 At5g16910 "cellulose synthase family protein similar to gi:2827143 cellulose synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays" 10 1 22 8 At5g17080 cathepsin-related contains weak similarity to Cathepsin L (EC 3.4.22.15) (Progesterone-dependent protein) (PDP) (Fragment) (Swiss-Prot:P25773) [Felis silvestris catus] 10 1 22 9 At5g17140 cysteine proteinase-related low similarity to cysteine proteinase [Sitophilus zeamais] GI:2804262 10 1 22 10 At5g17300 myb family transcription factor similar to CCA1 [Arabidopsis thaliana] GI:4090569; contains Pfam profile PF00249: Myb-like DNA-binding domain 10 1 22 11 At5g17350 expressed protein 10 1 22 12 At5g19940 plastid-lipid associated protein PAP-related / fibrillin-related weak hit to Pfam profile PF04755: PAP_fibrillin 10 1 22 13 At5g19970 expressed protein ; expression supported by MPSS 10 1 22 14 At5g20130 expressed protein 10 1 22 15 At5g20165 expressed protein 10 1 22 16 At5g20340 "beta-1,3-glucanase (BG5) identical to plant beta-1,3-glucanase bg5 GI:2808439 [Arabidopsis thaliana]" 10 1 22 17 At5g20400 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to naringenin,2-oxoglutarate 3-dioxygenase (flavonone-3-hydroxylase) [SP|Q06942][Malus domestica]; contains PF031712OG-Fe(II) oxygenase superfamily domain" 10 1 22 18 At5g20580 "expressed protein predicted protein, Arabidopsis thaliana" 10 1 22 19 At5g20630 germin-like protein (GER3) identical to germin-like protein subfamily 3 member 3 [SP|P94072] 10 1 22 20 At5g23920 expressed protein 10 1 22 21 At5g23980 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane component" 10 1 22 22 At5g24150 "squalene monooxygenase 1,1 / squalene epoxidase 1,1 (SQP1,1) identical to SP|O65404" 10 1 22 23 At5g24190 hypothetical protein 10 1 22 24 At5g24320 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 10 1 22 25 At5g24355 expressed protein ; expression supported by MPSS 10 1 23 1 At5g24530 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavanone 3-hydroxylase [Persea americana][GI:727410]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 10 1 23 2 At5g24580 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 10 1 23 3 At5g27510 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 10 1 23 4 At5g27570 "WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595) {Xenopus laevis}; similar to ""Will die slowly"" protein, Drosophia; putative cdc20 protein - Arabidopsis thaliana, EMBL:AF029262" 10 1 23 5 At5g27740 expressed protein 10 1 23 6 At5g27800 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 10 1 23 7 At5g27950 "kinesin motor protein-related kinesin heavy chain-like protein, potato, PIR:T07397" 10 1 23 8 At5g28010 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)]; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 10 1 23 9 At5g28210 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF03919: mRNA capping enzyme C-terminal domain" 10 1 23 10 At5g28250 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 10 1 23 11 At5g36190 hypothetical protein similar to unknown protein (gb|AAD08947.1) 10 1 23 12 At5g36250 "protein phosphatase 2C, putative / PP2C, putative " 10 1 23 13 At5g36790 "phosphoglycolate phosphatase, putative similar to phosphoglycolate phosphatase precursor [Chlamydomonas reinhardtii] GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 10 1 23 14 At5g36870 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 10 1 23 15 At5g37040 F-box family protein contains Pfam profile: PF00646 F-box domain 10 1 23 16 At5g37090 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 10 1 23 17 At5g37260 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 10 1 23 18 At5g37320 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 10 1 23 19 At5g40180 "hypothetical protein predicted protein, Arabidopsis thaliana" 10 1 23 20 At5g40240 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 10 1 23 21 At5g40420 glycine-rich protein / oleosin 10 1 23 22 At5g40480 expressed protein ; expression supported by MPSS 10 1 23 23 At5g40610 glycerol-3-phosphate dehydrogenase [NAD+] / GPDH strong similarity to SP|P52425 Glycerol-3-phosphate dehydrogenase [NAD+] (EC 1.1.1.8) {Cuphea lanceolata}; contains Pfam profile PF01210: NAD-dependent glycerol-3-phosphate dehydrogenase 10 1 23 24 At5g40660 "ATP12 protein-related weak similarity to SP|P22135 ATP12 protein, mitochondrial precursor {Saccharomyces cerevisiae}" 10 1 23 25 At5g40840 cohesion family protein SYN2 (SYN2) identical to cohesion family protein SYN2 [Arabidopsis thaliana] GI:12006360; supporting cDNA gi|12006359|gb|AF281154.1|AF281154 10 1 24 1 At5g40890 chloride channel protein (CLC-a) identical to GI:1742952 (gb|AAC05742.1) 10 1 24 2 At5g43570 "serine protease inhibitor, potato inhibitor I-type family protein similar to SP|P24076 Glu S.griseus protease inhibitor (BGIA) {Momordica charantia}; contains Pfam profile PF00280: Potato inhibitor I family" 10 1 24 3 At5g43630 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 10 1 24 4 At5g43810 "pinhead protein (PINHEAD) / zwille protein (ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 10 1 24 5 At5g43870 expressed protein 10 1 24 6 At5g44005 expressed protein 10 1 24 7 At5g44060 expressed protein similar to unknown protein (gb|AAD10670.1) 10 1 24 8 At5g44230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 1 24 9 At5g44290 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 10 1 24 10 At5g46795 expressed protein 10 1 24 11 At5g46850 expressed protein ; expression supported by MPSS 10 1 24 12 At5g47010 "RNA helicase, putative similar to type 1 RNA helicase pNORF1 [Homo sapiens] GI:1885356" 10 1 24 13 At5g47070 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 10 1 24 14 At5g47220 ethylene-responsive element-binding factor 2 (ERF2) identical to SP|O80338 Ethylene responsive element binding factor 2 (AtERF2) [Arabidopsis thaliana] 10 1 24 15 At5g47270 disease resistance protein-related contains weak similarity to Swiss-Prot:P54120 AIG1 protein [Arabidopsis thaliana] 10 1 24 16 At5g47435 "formyltetrahydrofolate deformylase, putative similar to formyltetrahydrofolate deformylase [strain PCC 6803- Synechocystis sp.] SWISS-PROT:Q55135" 10 1 24 17 At5g47455 expressed protein 10 1 24 18 At5g50090 expressed protein 10 1 24 19 At5g50140 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 10 1 24 20 At5g50300 xanthine/uracil/vitamin C permease family protein contains Pfam profile PF00860: Permease family 10 1 24 21 At5g50350 expressed protein 10 1 24 22 At5g50520 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 10 1 24 23 At5g50570 "squamosa promoter-binding protein, putative similar to squamosa promoter binding protein-like 9 [Arabidopsis thaliana] GI:5931677; contains Pfam profile PF03110: SBP domain" 10 1 24 24 At5g50780 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Homo sapiens] GI:5410257; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 10 1 24 25 At5g50840 expressed protein 10 1 25 1 At5g53550 "transporter, putative similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 10 1 25 2 At5g53610 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 10 1 25 3 At5g53800 expressed protein 10 1 25 4 At5g53850 haloacid dehalogenase-like hydrolase family protein low similarity to enolase-phosphatase E-1 enzyme [Klebsiella oxytoca] GI:401712; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 10 1 25 5 At5g53990 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 1 25 6 At5g54050 DC1 domain-containing protein 10 1 25 7 At5g54180 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 10 1 25 8 At5g54240 expressed protein 10 1 25 9 At5g56960 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 1 25 10 At5g57015 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 10 1 25 11 At5g57150 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 1 25 12 At5g57180 expressed protein ; supporting cDNA gi|13991645|gb|AF359387.1|AF359387 10 1 25 13 At5g57340 expressed protein 10 1 25 14 At5g57390 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 10 1 25 15 At5g57565 protein kinase family protein similar to CBL-interacting protein kinase 8 [Arabidopsis thaliana] GI:19343483; contains Pfam profile PF00069: Protein kinase domain 10 1 25 16 At5g57620 myb family transcription factor (MYB36) contains PFAM profile: myb DNA binding domain PF00249 10 1 25 17 At5g60150 expressed protein ; expression supported by MPSS 10 1 25 18 At5g60210 cytoplasmic linker protein-related contains weak similarity to cytoplasmic linker protein CLIP-170 (GI:2905649) [Gallus gallus] 10 1 25 19 At5g60370 "expressed protein predicted protein, Arabidopsis thaliana" 10 1 25 20 At5g60400 expressed protein 10 1 25 21 At5g60570 "kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646 F-box domain" 10 1 25 22 At5g60600 "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, putative / GcpE family protein similar to GcpE [Plasmodium falciparum] GI:13094969; contains Pfam profile PF04551: GcpE protein; supporting cDNA gi|27462471|gb|AF434673.1" 10 1 25 23 At5g60760 2-phosphoglycerate kinase-related contains weak similarity to 2-phosphoglycerate kinase (GI:467751) [Methanothermus fervidus] 10 1 25 24 At5g60820 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 1 25 25 At5g63500 expressed protein 10 1 26 1 At5g63560 "transferase family protein similar to hypersensitivity-related gene product HSR201 - Nicotiana tabacum, EMBL:X95343; contains Pfam transferase family domain PF00248" 10 1 26 2 At5g63730 IBR domain-containing protein contains similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR domain 10 1 26 3 At5g63790 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; contains similarity to NAC-domain protein 10 1 26 4 At5g63950 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|Q03468 Excision repair protein ERCC-6 (Cockayne syndrome protein CSB) {Homo sapiens}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 10 1 26 5 At5g63990 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 10 1 26 6 At5g64160 expressed protein 10 1 26 7 At5g64200 "arginine/serine-rich splicing factor SC35 contains similarity to splicing factor; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 10 1 26 8 At5g66610 LIM domain-containing protein contains Pfam profile PF00412: LIM domain 10 1 26 9 At5g66670 hypothetical protein contains Pfam:PF05055: Protein of unknown function (DUF677) 10 1 26 10 At5g66815 expressed protein 10 1 26 11 At5g66870 LOB domain family protein / lateral organ boundaries domain family protein (LBD36) identical to SP|Q9FKZ3 Putative LOB domain protein 36 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 10 1 26 12 At5g67020 expressed protein 10 1 26 13 At5g67070 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 10 1 26 14 At5g67230 "glycosyl transferase family 43 protein low similarity to Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, Homo sapiens [SP|Q9P2W7], Rattus norvegicus [SP|O35789]; contains Pfam domain Glycosyltransferase family 43 [PF03360]" 10 1 26 15 At5g67280 "leucine-rich repeat transmembrane protein kinase, putative " 10 1 26 16 At3g42628 phosphoenolpyruvate carboxylase-related / PEP carboxylase-related identical to phosphoenolpyruvate carboxylase [Arabidopsis thaliana] GP:26800701 over first 45 residues 10 1 26 17 At3g42690 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At2g11345, At4g04130" 10 1 26 18 At3g42860 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 10 1 26 19 At3g42950 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase precursor [Cucumis melo] GI:3320460; contains PF00295: Glycosyl hydrolases family 28 10 1 26 20 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain 10 1 26 21 At3g43300 guanine nucleotide exchange family protein similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 {Homo sapiens}; contains Pfam profile PF01369: Sec7 domain 10 1 26 22 At3g43500 hypothetical protein 10 1 26 23 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 10 1 26 24 Blank Blank 10 1 26 25 Blank Blank 10 2 1 1 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 10 2 1 2 At5g46430 60S ribosomal protein L32 (RPL32B) 10 2 1 3 Alien1 Control: Stratagene Spotreport Alien Oligo 10 2 1 4 Alien7 Control: Stratagene Spotreport Alien Oligo 10 2 1 5 atc03 Randomly generated negative control 10 2 1 6 atc09 Randomly generated negative control 10 2 1 7 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 10 2 1 8 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 10 2 1 9 At1g03445 "kelch repeat-containing protein / serine/threonine phosphoesterase family protein contains Pfam profiles: PF00149 calcineurin-like phosphoesterase, PF01344: kelch motif" 10 2 1 10 At1g03490 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 10 2 1 11 At1g03687 DTW domain-containing protein contains Pfam PF03942: DTW domain 10 2 1 12 At1g03750 "helicase, putative similar to SP|Q03468 Excision repair protein ERCC-6 (Cockayne syndrome protein CSB) {Homo sapiens}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF02810: SEC-C motif" 10 2 1 13 At1g03880 "12S seed storage protein (CRB) identical to 12S seed storage protein, gi|808937 [SP|P15456] [Plant Mol Biol 11:805-820 (1988)]; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305" 10 2 1 14 At1g03930 "protein kinase (ADK1) identical to dual specificity kinase 1 (ADK1) [Arabidopsis thaliana] gi|1216484|gb|AAB47968; supported by cDNA gi:18700076 and gi:1216483. Note: differences between cDNAs in the 11th exon, possibly due to errors or alternative splicing." 10 2 1 15 At1g04090 expressed protein 10 2 1 16 At1g04140 "transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to neural cell adhesion molecule 2, large isoform precursor gb|M76710 from Xenopus laevis, and beta transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from" 10 2 1 17 At1g06790 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 10 2 1 18 At1g06830 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 10 2 1 19 At1g07010 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 10 2 1 20 At1g07060 expressed protein 10 2 1 21 At1g07240 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 2 1 22 At1g07300 josephin protein-related similar to Josephin-like protein (Swiss-Prot:O82391) [Arabidopsis thaliana] 10 2 1 23 At1g07420 sterol 4-alpha-methyl-oxidase 2 (SMO2) identical to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase GI:16973470 10 2 1 24 At1g07473 hypothetical protein 10 2 1 25 At1g09940 "glutamyl-tRNA reductase 2 / GluTR (HEMA2) identical to glutamyl-tRNA reductase 2, chloroplast [SP|P49294]" 10 2 2 1 At1g09980 expressed protein contains Pfam profile PF05057: Protein of unknown function (DUF676); non-consensus GC donor splice site at exon boundary 144764 10 2 2 2 At1g10140 expressed protein similar to EST gb|AA598098 10 2 2 3 At1g10200 "transcription factor LIM, putative strong similarity to transcription factor Ntlim1 [Nicotiana tabacum] GI:5689136, LIM domain protein WLIM-1 [Helianthus annuus] GI:5070280; contains Pfam profile PF00412: LIM domain" 10 2 2 4 At1g10370 "glutathione S-transferase, putative (ERD9) similar to glutathione S-transferase TSI-1 [Aegilops tauschii] gi:2190992 gb:AAD10129; similar to ESTs gb|R29860, emb|Z29757, and emb|Z29758; identical to cDNA ERD9 mRNA for glutathione S-transferase, GI:15375407, glutathione S-transferase [Arabidopsis thaliana] GI:15375408" 10 2 2 5 At1g10420 hypothetical protein 10 2 2 6 At1g10570 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to EST gb|N96456" 10 2 2 7 At1g10610 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 2 2 8 At1g13270 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 10 2 2 9 At1g13330 expressed protein similar to nuclear receptor coactivator GT198 (GI:16506273) {Rattus norvegicus}; similar to TBP-1 interacting protein (GI:7328534) [Homo sapiens] 10 2 2 10 At1g13500 hypothetical protein 10 2 2 11 At1g13560 aminoalcoholphosphotransferase (AAPT1) identical to aminoalcoholphosphotransferase GI:3661593 from [Arabidopsis thaliana] 10 2 2 12 At1g13740 expressed protein 10 2 2 13 At1g13800 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 2 14 At1g13980 pattern formation protein (EMB30) (GNOM) identical to SP|Q42510; contains Pfam profile PF01369: Sec7 domain 10 2 2 15 At1g14040 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 10 2 2 16 At1g16670 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to receptor-like serine/threonine kinase GI:2465923 from [Arabidopsis thaliana]" 10 2 2 17 At1g16720 expressed protein 10 2 2 18 At1g16870 "mitochondrial 28S ribosomal protein S29-related contains weak similarity to Swiss-Prot:P51398 mitochondrial 28S ribosomal protein S29 (MRP-S29, Death-associated protein 3, DAP-3) [Homo sapiens]" 10 2 2 19 At1g16890 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 10 2 2 20 At1g17080 expressed protein 10 2 2 21 At1g17140 tropomyosin-related similar to Tropomyosin 1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae} 10 2 2 22 At1g17300 expressed protein 10 2 2 23 At1g17360 COP1-interacting protein-related similar to COP1-Interacting Protein 7 (CIP7) (GI:3327870) [Arabidopsis thaliana] 10 2 2 24 At1g20260 "vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative strong similarity to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF02874: ATP synthase alpha/beta family beta-barrel domain" 10 2 2 25 At1g20310 expressed protein 10 2 3 1 At1g20490 AMP-dependent synthetase and ligase family protein similar to SP|Q42524 and SP|Q9S725; contains Pfam AMP-binding enzyme domain PF00501 10 2 3 2 At1g20530 hypothetical protein 10 2 3 3 At1g20690 expressed protein 10 2 3 4 At1g20730 expressed protein contains TIGRFAM TIGR01640 : F-box protein interaction domain 10 2 3 5 At1g20890 "expressed protein Location of ESTs OAO242 5' end, gb|Z30466 and OAO242 3' end, gb|Z30467" 10 2 3 6 At1g20940 F-box family protein contains Pfam:PF00646 F-box domain 10 2 3 7 At1g23610 hypothetical protein contains Pfam profile PF02713: Domain of unknown function DUF220 10 2 3 8 At1g23670 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 10 2 3 9 At1g23830 expressed protein 10 2 3 10 At1g23880 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 10 2 3 11 At1g24030 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to protein kinase APK1A, SWISS-PROT:Q06548 [Arabidopsis thaliana]" 10 2 3 12 At1g24070 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 10 2 3 13 At1g24250 paired amphipathic helix repeat-containing protein weak similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 10 2 3 14 At1g24267 expressed protein 10 2 3 15 At1g27990 expressed protein 10 2 3 16 At1g28050 zinc finger (B-box type) family protein 10 2 3 17 At1g28170 sulfotransferase family protein similar to steroid sulfotransferase 3 GI:3420008 from [Brassica napus]; contains Pfam profile PF00685: Sulfotransferase domain 10 2 3 18 At1g28220 "purine permease, putative similar to purine permease GI:7620007 from [Arabidopsis thaliana]" 10 2 3 19 At1g28360 ERF domain protein 12 (ERF12) identical to ERF domain protein 12(AtERF12) GI:15207791 from [Arabidopsis thaliana] 10 2 3 20 At1g28395 expressed protein 10 2 3 21 At1g28550 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303742 from (Pisum sativum)" 10 2 3 22 At1g28580 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 10 2 3 23 At1g31730 "epsilon-adaptin, putative similar to SP|Q9UPM8 Adapter-related protein complex 4 epsilon 1 subunit (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit) {Homo sapiens}; contains Pfam profile: PF01602 Adaptin N terminal region" 10 2 3 24 At1g31790 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 3 25 At1g31940 expressed protein 10 2 4 1 At1g32010 myosin heavy chain-related 10 2 4 2 At1g32200 "glycerol-3-phosphate acyltransferase, chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis thaliana}; contains Pfam profile PF01553: Acyltransferase" 10 2 4 3 At1g32240 myb family transcription factor (KAN2) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA GARP-like putative transcription factor KANADI2 (KAN2) GI:15723594 10 2 4 4 At1g32380 "ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2) identical to SP:Q42583 from [Arabidopsis thaliana]; strong similarity to phosphoribosyl diphosphate synthetase 1 (ribose-phosphate pyrophosphokinase 1 (PRS I) [Arabidopsis thaliana] GI:633140, SP|Q42581" 10 2 4 5 At1g32410 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 10 2 4 6 At1g35920 "hypothetical protein includes At5g34960, At2g14450, At1g35920" 10 2 4 7 At1g36030 F-box family protein similar to hypothetical protein GB:AAC61810 10 2 4 8 At1g36390 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform b [Chlamydomonas reinhardtii] GI:15384279; contains Pfam profile PF01025: co-chaperone GrpE 10 2 4 9 At1g36640 expressed protein 10 2 4 10 At1g37020 Ulp1 protease family protein 10 2 4 11 At1g37140 "RNA-binding protein, putative similar to terminal ear1 GI:3153237 from [Zea mays]" 10 2 4 12 At1g40230 hypothetical protein 10 2 4 13 At1g41820 hypothetical protein 10 2 4 14 At1g48195 zinc finger (CCCH-type) family protein contains Pfam profile PF00642: Zinc finger C-x8-C-x5-C-x3-H type 10 2 4 15 At1g48250 hypothetical protein 10 2 4 16 At1g48420 "desulfhydrase family similar to similar to D-cysteine desulfhydrase (EC 4.4.1.15). (Swiss-Prot:P59329) [Escherichia coli O6]; contains TIGRFAM TIGR01275: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family profile" 10 2 4 17 At1g48480 "leucine-rich repeat transmembrane protein kinase, putative contains similarity to many predicted protein kinases" 10 2 4 18 At1g48620 "histone H1/H5 family protein weak similarity to HMG I/Y like protein [Glycine max] GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum] GI:20502966; contains Pfam profiles PF00538: linker histone H1 and H5 family, PF02178: AT hook motif" 10 2 4 19 At1g48670 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 10 2 4 20 At1g48860 "3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative strong similarity to 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase SP|P05466 from (Arabidopsis thaliana)" 10 2 4 21 At1g48930 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-beta-1,4-glucanase GI:4972236 from [Fragaria x ananassa]" 10 2 4 22 At1g51915 cryptdin protein-related contains weak similarity to Swiss-Prot:P17533 cryptdin-related protein 1C precursor (CRS1C) [Mus musculus] 10 2 4 23 At1g51965 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 4 24 At1g52140 expressed protein 10 2 4 25 At1g52180 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 10 2 5 1 At1g52340 short-chain dehydrogenase/reductase (SDR) family protein similar to stem secoisolariciresinol dehydrogenase GI:13752458 from [Forsythia x intermedia] 10 2 5 2 At1g52410 caldesmon-related weak similarity to Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus] 10 2 5 3 At1g52540 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 10 2 5 4 At1g52590 expressed protein 10 2 5 5 At1g55270 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 4 [Arabidopsis thaliana] GI:10716953; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 2 5 6 At1g55325 expressed protein 10 2 5 7 At1g55460 Kin17 DNA-binding protein-related contains similarity to zinc finger protein rts2 GB:U16133 GI:563244 from [Saccharomyces cerevisiae] 10 2 5 8 At1g55520 transcription initiation factor IID-2 (TFIID-2) / TATA-box factor 2 / TATA sequence-binding protein 2 (TBP2) identical to Swiss-Prot:P28148|TF22_ARATH Transcription initiation factor TFIID-2 (TATA-box factor 2) (TATA sequence-binding protein 2) (TBP-2) [Arabidopsis thaliana] 10 2 5 9 At1g55650 "high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein low similarity to Dead Ringer Protein Chain A Dna-Binding Domain (GI:6573608), Arid-Dna Complex (GI:20150982) from [Drosophila melanogaster]; contains Pfam profiles PF00505: HMG (high mobility group) box, PF01388: ARID/BRIGHT DNA binding domain" 10 2 5 10 At1g55690 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and Phosphatidylinositol Transfer Protein GB:2780955 GI:2780955 [Saccharomyces cerevisiae] 10 2 5 11 At1g55860 "ubiquitin-protein ligase 1 (UPL1) nearly identical to ubiquitin-protein ligase 1 [Arabidopsis thaliana] GI:7108521; E3, HECT-domain protein family; similar to GI:7108521, GB:AAF36454 from [Arabidopsis thaliana]" 10 2 5 12 At1g55900 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 10 2 5 13 At1g60560 SWIM zinc finger family protein contains Pfam domain PF04434: SWIM zinc finger 10 2 5 14 At1g60620 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514324; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 10 2 5 15 At1g60800 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 10 2 5 16 At1g60850 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514322; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 10 2 5 17 At1g61010 "cleavage and polyadenylation specificity factor, putative similar to cleavage and polyadenylation specificity factor 73 kDa subunit [Homo sapiens] SWISS-PROT:Q9UKF6" 10 2 5 18 At1g61065 expressed protein 10 2 5 19 At1g61210 "WD-40 repeat family protein / katanin p80 subunit, putative contains 5 WD-40 repeats (PF00400); similar to katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus]" 10 2 5 20 At1g61270 "lysine and histidine specific transporter, putative similar to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 10 2 5 21 At1g64030 "serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 [Cucurbita maxima] GI:9937311, serpin [Triticum aestivum] GI:871551; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 10 2 5 22 At1g64080 expressed protein identical to hypothetical protein GB:AAF24565 GI:6692100 from [Arabidopsis thaliana] 10 2 5 23 At1g64255 SWIM zinc finger family protein contains Pfam profile PF04434: SWIM zinc finger 10 2 5 24 At1g64310 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 2 5 25 At1g64470 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 10 2 6 1 At1g64530 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 10 2 6 2 At1g64700 expressed protein 10 2 6 3 At1g64750 DSS1/SEM1 family protein contains Pfam profile PF05160: DSS1/SEM1 family 10 2 6 4 At1g67560 "lipoxygenase family protein similar to 13-lipoxygenase GB:CAA65269 [Solanum tuberosum], gi:1654140 [Lycopersicon esculentum]" 10 2 6 5 At1g67623 F-box family protein hypothetical protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 2 6 6 At1g67770 "RNA-binding protein, putative similar to terminal ear1 gb|AAC39463.1" 10 2 6 7 At1g67820 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C emb|CAA72341.1" 10 2 6 8 At1g67940 "ABC transporter family protein similar to ABC transporters: GB:BAA77876 [Escherichia coli], GB:P07655 [Escherichia coli]; contains Pfam profile: PF00005 ABC transporter" 10 2 6 9 At1g67980 "caffeoyl-CoA 3-O-methyltransferase, putative similar to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa]" 10 2 6 10 At1g68130 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 2 6 11 At1g68185 ubiquitin-related similar to ubiquitin-like protein smt3/pmt3 SP:O13351 from [Fission yeast] 10 2 6 12 At1g70840 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 10 2 6 13 At1g70895 "CLE17, putative CLAVATA3/ESR-Related 17 (CLE17)" 10 2 6 14 At1g71060 pentatricopeptide (PPR) repeat-containing protein low similarity to CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat 10 2 6 15 At1g71120 GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 10 2 6 16 At1g71290 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domaincontains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; 10 2 6 17 At1g71330 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter 10 2 6 18 At1g71520 "AP2 domain-containing transcription factor, putative " 10 2 6 19 At1g71691 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 Lipase Acylhydrolase with GDSL-like motif" 10 2 6 20 At1g74390 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 10 2 6 21 At1g74430 myb family transcription factor (MYB95) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 2 6 22 At1g74600 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 2 6 23 At1g74670 "gibberellin-responsive protein, putative similar to SP|P46690 Gibberellin-regulated protein 4 precursor {Arabidopsis thaliana} GASA4; contains Pfam profile PF02704: Gibberellin regulated protein" 10 2 6 24 At1g74850 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 6 25 At1g74910 ADP-glucose pyrophosphorylase family protein contains Pfam profile PF00483: Nucleotidyl transferase; low similarity to mannose-1-phosphate guanylyltransferase [Hypocrea jecorina] GI:3323397 10 2 7 1 At1g75080 brassinosteroid signalling positive regulator (BZR1) identical to to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 10 2 7 2 At1g75130 cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus] 10 2 7 3 AT5G57480 PC-1 B03 10 2 7 4 3XSSC PC-1 B15 10 2 7 5 AT1G29930 PC-1 F03 10 2 7 6 3XSSC PC-1 F15 10 2 7 7 AT3G44150 PC-1 J03 10 2 7 8 3XSSC PC-1 J15 10 2 7 9 AT4G00810 PC-1 N03 10 2 7 10 3XSSC PC-1 N15 10 2 7 11 At1g77855 hypothetical protein 10 2 7 12 At1g77910 hypothetical protein contains similarity to NADH dehydrogenase subunit 1 10 2 7 13 At1g78070 "WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat" 10 2 7 14 At1g78130 transporter-related low similarity to spinster type III [Drosophila melanogaster] GI:12003974; contains Pfam profile: PF00083 major facilitator superfamily protein 10 2 7 15 At1g78280 transcription factor jumonji (jmjC) domain-containing protein contains Pfam PF00646: F-box domain; contains Pfam PF02373: jmjC domain; similar to apoptotic cell clearance receptor PtdSerR (GI:11037740) [Mus musculus] 10 2 7 16 At1g78355 hypothetical protein 10 2 7 17 At1g78530 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 2 7 18 At1g78590 "ATP-NAD kinase family protein contains Pfam domain, PF01513: ATP-NAD kinase" 10 2 7 19 At2g01170 amino acid permease family protein weak similarity to GABA permease [Emericella nidulans] GI:4972245; contains Pfam profile PF00324: Amino acid permease 10 2 7 20 At2g01200 auxin-responsive AUX/IAA family protein contains Pfam profile: PF02309 AUX/IAA family 10 2 7 21 At2g01320 ABC transporter family protein 10 2 7 22 At2g01390 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 7 23 At2g01540 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 10 2 7 24 At2g01610 invertase/pectin methylesterase inhibitor family protein low similarity to SP|Q42534 Pectinesterase 2 precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2) {Arabidopsis thaliana}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 10 2 7 25 At2g01755 hypothetical protein 10 2 8 1 At2g01810 PHD finger family protein contains Pfam profile: PF00628: PHD-finger 10 2 8 2 At2g04930 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 10 2 8 3 At2g05070 chlorophyll A-B binding protein / LHCII type II (LHCB2.2) identical to Lhcb2 protein [Arabidopsis thaliana] GI:4741946; contains Pfam profile PF00504: Chlorophyll A-B binding protein 10 2 8 4 At2g05270 expressed protein 10 2 8 5 At2g05350 hypothetical protein 10 2 8 6 At2g05564 hypothetical protein 10 2 8 7 At2g05630 "autophagy 8d (APG8d) identical to autophagy 8d [Arabidopsis thaliana] GI:19912157; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 10 2 8 8 At2g05860 "hypothetical protein similar to At2g10840, At5g35280, At2g10500, At4g07310, At4g07430, At1g39270" 10 2 8 9 At2g05915 hypothetical protein 10 2 8 10 At2g14045 expressed protein 10 2 8 11 At2g14100 cytochrome P450 family protein contains Pfam profile PF00067: Cytochrome P450 10 2 8 12 At2g14340 hypothetical protein 10 2 8 13 At2g14500 F-box family protein contains F-box domain Pfam:PF00646 10 2 8 14 At2g14680 "myosin heavy chain-related contains weak similarity to Swiss-Prot:P35579 myosin heavy chain, nonmuscle type A (Cellular myosin heavy chain, type A, Nonmuscle myosin heavy chain-A, NMMHC-A) [Homo sapiens]" 10 2 8 15 At2g14740 "vacuolar sorting receptor, putative nearly identical to vacuolar sorting receptor homolog [Arabidopsis thaliana] GI:1737220; contains a calcium-binding EGF-like domain signature" 10 2 8 16 At2g14880 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 10 2 8 17 At2g14910 expressed protein 10 2 8 18 At2g18010 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesnerian] ;similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Phaseolus aureus] 10 2 8 19 At2g18050 "histone H1-3 (HIS1-3) similar to histone H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3 [Arabidopsis thaliana] GI:1809305" 10 2 8 20 At2g18196 copper chaperone (CCH)-related low similarity to copper chaperone homolog CCH [Glycine max] GI:6525011 contains Pfam profile PF00403: Heavy-metal-associated domain 10 2 8 21 At2g18240 "RER1 protein, putative similar to SP|O48671 RER1B protein (AtRER1B) {Arabidopsis thaliana}, SP|O48670 RER1A protein (AtRER1A) {Arabidopsis thaliana}; contains Pfam profile PF03248: Rer1 family" 10 2 8 22 At2g18390 ADP-ribosylation factor-like protein 2 (ARL2) identical to ARL2 G-protein (Halimasch; HAL; TITAN5) GI:20514265 from [Arabidopsis thaliana]; identical to cDNA ARL2 G-protein mRNA GI:20514264; contains Pfam profile PF00025: ADP-ribosylation factor family; contains TIGRfam profile TIGR00231: small GTP-binding protein domain 10 2 8 23 At2g18460 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502); contains non-consensus splice sites" 10 2 8 24 At2g18620 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:413730 to geranylgeranyl pyrophosphate synthase, chloroplast precursor GB:P34802 from [Arabidopsis thaliana] synonymous with farnesyltranstransferase" 10 2 8 25 At2g18680 expressed protein 10 2 9 1 At2g21330 "fructose-bisphosphate aldolase, putative strong similarity to plastidic fructose-bisphosphate aldolase (EC 4.1.2.13) from Nicotiana paniculata (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057 [SP|Q40677]" 10 2 9 2 At2g21390 "coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]" 10 2 9 3 At2g21580 40S ribosomal protein S25 (RPS25B) 10 2 9 4 At2g21620 universal stress protein (USP) family protein / responsive to dessication protein (RD2) strong similarity to RD2 protein [Arabidopsis thaliana] GI:15320408; contains Pfam profile PF00582: universal stress protein family; identical to cDNA RD2 GI:15320407 10 2 9 5 At2g21820 expressed protein 10 2 9 6 At2g21870 expressed protein 10 2 9 7 At2g22030 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 2 9 8 At2g22090 UBP1 interacting protein 1a (UBA1a) nearly identical to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); based on cDNA of partial mRNA for UBP1 interacting protein 1a (uba1a) GI:19574235 10 2 9 9 At2g24960 expressed protein ; expression supported by MPSS 10 2 9 10 At2g25050 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128" 10 2 9 11 At2g25230 myb family transcription factor (MYB100) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 2 9 12 At2g25290 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q99614 Tetratricopeptide repeat protein 1 {Homo sapiens}; contains Pfam profiles PF00564: PB1 domain, PF00515: TPR Domain" 10 2 9 13 At2g25470 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 10 2 9 14 At2g25530 AFG1-like ATPase family protein contains Pfam profile: PF03969 AFG1-like ATPase 10 2 9 15 At2g25670 expressed protein 10 2 9 16 At2g25730 expressed protein 10 2 9 17 At2g28330 expressed protein 10 2 9 18 At2g28380 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 10 2 9 19 At2g28550 AP2 domain-containing transcription factor RAP2.7 (RAP2.7) nearly identical to AP2 domain transcription factor RAP2.7 (GI:2281639) [Arabidopsis thaliana] 10 2 9 20 At2g28600 expressed protein 10 2 9 21 At2g28760 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 10 2 9 22 At2g28810 Dof-type zinc finger domain-containing protein similar to zinc finger protein OBP2 GI:5059394 from [Arabidopsis thaliana] 10 2 9 23 At2g29000 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 10 2 9 24 At2g29070 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 10 2 9 25 At2g31750 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 2 10 1 At2g31810 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 10 2 10 2 At2g31955 "molybdopterin biosynthesis protein, putative / molybdenum cofactor biosynthesis enzyme, putative 3' fragment; strong similarity to SP|Q39055 Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2) {Arabidopsis thaliana}" 10 2 10 3 At2g32000 DNA topoisomerase family protein similar to DNA topoisomerase III beta-1 (EC 5.99.1.2)(SP:Q9Z321) {Mus musculus} 10 2 10 4 At2g32170 expressed protein ;supported by cDNA GI:20259498 10 2 10 5 At2g32230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 10 6 At2g32360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 10 2 10 7 At2g32415 3'-5' exonuclease domain-containing protein similar to SP|Q12149 Exosome complex exonuclease RRP6 (EC 3.1.13.-) (Ribosomal RNA processing protein 6) {Saccharomyces cerevisiae} 10 2 10 8 At2g35000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 10 9 At2g35050 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 10 2 10 10 At2g35210 human Rev interacting-like family protein / hRIP family protein similar to ARFGAP1 protein GI:7211442 from [Homo sapiens]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 10 2 10 11 At2g35260 expressed protein 10 2 10 12 At2g35450 "amidohydrolase family similar to fluorene degradation (FldB) protein (GI:7573256) [Sphingomonas sp. LB126]; similar to 2-pyrone-4,6-dicarboxylic acid hydrolase (GI:3738249) [Sphingomonas paucimobilis]; contains Pfam PF04909: Amidohydrolase family" 10 2 10 13 At2g35510 "WWE domain-containing protein contains Pfam domain, PF02825: WWE domain" 10 2 10 14 At2g35635 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 10 2 10 15 At2g35670 "transcription factor, putative / fertilization-independent seed 2 protein (FIS2) identical to GB:AF096095" 10 2 10 16 At2g38240 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Citrus unshiu][gi:4126403], leucoanthocyanidin dioxygenase [Daucus carota][gi:5924383]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 10 2 10 17 At2g38300 myb family transcription factor 10 2 10 18 At2g38465 expressed protein 10 2 10 19 At2g38530 nonspecific lipid transfer protein 2 (LTP2) identical to nonspecific lipid-transfer protein 2 from Arabidopsis thaliana [SP|Q9S7I3]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 2 10 20 At2g38700 mevalonate diphosphate decarboxylase (MVD1) identical to mevalonate diphosphate decarboxylase [Arabidopsis thaliana] gi|2288887|emb|CAA74700 10 2 10 21 At2g38760 annexin 3 (ANN3) nearly identical to annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082; contains Pfam profile PF00191: Annexin 10 2 10 22 At2g38870 "protease inhibitor, putative similar to SP|P24076 Glu S.griseus protease inhibitor (BGIA) {Momordica charantia}; contains Pfam profile PF00280: Potato inhibitor I family" 10 2 10 23 At2g38905 "hydrophobic protein, putative / low temperature and salt responsive protein, putative strong similarity to SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana}; contains Pfam profile PF01679: Uncharacterized protein family" 10 2 10 24 At2g41440 expressed protein 10 2 10 25 At2g41500 "WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related similar to U4/U6 small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (7 copies)|19877698|gb|AU238529.1|AU238529" 10 2 11 1 At2g41650 expressed protein 10 2 11 2 At2g41705 camphor resistance CrcB family protein contains Pfam profile PF02537: CrcB-like protein 10 2 11 3 At2g41835 "zinc finger (C2H2 type, AN1-like) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type; contains Pfam domain, PF01428: AN1-like Zinc finger" 10 2 11 4 At2g41880 guanylate kinase 1 (GK-1) identical to guanylate kinase (GK-1) [Arabidopsis thaliana] gi|7861795|gb|AAF70408 10 2 11 5 At2g42040 expressed protein 10 2 11 6 At2g42100 "actin, putative very strong similarity to SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin" 10 2 11 7 At2g44690 Rac-like GTP-binding protein (ARAC9) identical to rac-like protein ARAC9 GI:5381419 from [Arabidopsis thaliana] 10 2 11 8 At2g44745 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 10 2 11 9 At2g44910 homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein 4 identical to Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953) [Arabidopsis thaliana] 10 2 11 10 At2g44950 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 2 11 11 At2g45120 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 2 11 12 At2g45160 scarecrow transcription factor family protein 10 2 11 13 At2g45350 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 2 11 14 At2g45420 LOB domain protein 18 / lateral organ boundaries domain protein 18 (LBD18) identical to LOB DOMAIN 18 [Arabidopsis thaliana] GI:17227164; supported by full-length cDNA gi:17227163 10 2 11 15 At2g48020 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 10 2 11 16 At2g48070 expressed protein 10 2 11 17 At3g01020 "iron-sulfur cluster assembly complex protein, putative similar to ISCU2 (GI:11545707) [Homo sapiens]; similar to NIFU-like protein (GI:15919270) [Cowdria ruminantium]" 10 2 11 18 At3g01060 expressed protein 10 2 11 19 At3g01210 RNA recognition motif (RRM)-containing protein 10 2 11 20 At3g01270 pectate lyase family protein similar to pectate lyase P59 SP:P15722 from [Lycopersicon esculentum] 10 2 11 21 At3g01400 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeats (4 copies) 10 2 11 22 At3g01450 expressed protein 10 2 11 23 At3g04030 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 10 2 11 24 At3g04070 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM GB:CAA63101 [Petunia x hybrida] 10 2 11 25 At3g04250 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 10 2 12 1 At3g04300 expressed protein 10 2 12 2 At3g04460 Pex2/Pex12 N-terminal domain-containing protein similar to SP|O00623 Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome assembly factor-3) (PAF-3) {Homo sapiens}; contains Pfam profile PF04757: Pex2 / Pex12 amino terminal region 10 2 12 3 At3g04520 threonine aldolase family protein similar to L-allo-threonine aldolase SP:O07051 from [Aeromonas jandaei] 10 2 12 4 At3g04650 expressed protein 10 2 12 5 At3g04710 ankyrin repeat family protein contains Pfam profile: PF00023 ankyrin repeat 10 2 12 6 At3g07190 expressed protein 10 2 12 7 At3g07250 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF02136: Nuclear transport factor 2 (NTF2) domain" 10 2 12 8 At3g07420 "asparaginyl-tRNA synthetase 2, cytoplasmic / asparagine-tRNA ligase 2 (SYNC2) nearly identical to SP|Q9SW95; HMM hit: tRNA synthetases class II" 10 2 12 9 At3g07460 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 10 2 12 10 At3g07580 expressed protein 10 2 12 11 At3g07640 expressed protein 10 2 12 12 At3g07780 expressed protein 10 2 12 13 At3g07830 "polygalacturonase, putative / pectinase, putative strong similarity to polygalacturonase (PGA3) GI:3152948 from [Arabidopsis thaliana]" 10 2 12 14 At3g10810 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 10 2 12 15 At3g10850 "hydroxyacylglutathione hydrolase, cytoplasmic / glyoxalase II (GLX2-2) identical to SP|O24496 Hydroxyacylglutathione hydrolase cytoplasmic (EC 3.1.2.6) (Glyoxalase II) (Glx II) {Arabidopsis thaliana}" 10 2 12 16 At3g10980 expressed protein 10 2 12 17 At3g11010 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 10 2 12 18 At3g11200 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 10 2 12 19 At3g11250 60S acidic ribosomal protein P0 (RPP0C) similar to 60S acidic ribosomal protein P0 GI:2088654 [Arabidopsis thaliana] 10 2 12 20 At3g11397 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: PRA1 family protein 10 2 12 21 At3g11440 myb family transcription factor (MYB65) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 2 12 22 At3g13810 "zinc finger (C2H2 type) family protein similar to finger protein pcp1 GB:S48856 from [Solanum tuberosum] contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 2 12 23 At3g13857 expressed protein 10 2 12 24 At3g14020 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 10 2 12 25 At3g14070 "cation exchanger, putative (CAX9) similar to sodium/calcium exchanger protein [Mus musculus] gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 10 2 13 1 At3g14190 expressed protein 10 2 13 2 At3g14230 AP2 domain-containing protein RAP2.2 (RAP2.2) identical to AP2 domain containing protein RAP2.2 GI:2281629 from [Arabidopsis thaliana] 10 2 13 3 At3g14370 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 2 13 4 At3g14415 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414" 10 2 13 5 At3g16990 TENA/THI-4 family protein contains Pfam profile: PF03070 TENA/THI-4 family 10 2 13 6 At3g17060 pectinesterase family protein similar to pectinesterase GB:AAB57669 [Citrus sinensis]; contains Pfam profile: PF01095 pectinesterase 10 2 13 7 At3g17200 hypothetical protein 10 2 13 8 At3g17240 "dihydrolipoamide dehydrogenase 2, mitochondrial / lipoamide dehydrogenase 2 (MTLPD2) nearly identical to GB:AAF34796 [gi:6984216] from [Arabidopsis thaliana]; alternative splice form exists" 10 2 13 9 At3g17390 "S-adenosylmethionine synthetase, putative similar to S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2, AdoMet synthetase 2) [Catharanthus roseus] SWISS-PROT:Q96552" 10 2 13 10 At3g17450 hAT dimerisation domain-containing protein contains Pfam profile PF04937: Protein of unknown function (DUF 659) 10 2 13 11 At3g17600 "auxin-responsive protein, putative similar to SP|O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana}; contains Pfam profile: PF02309: AUX/IAA family" 10 2 13 12 At3g17620 F-box family protein contains Pfam profile: PF00646 F-box domain 10 2 13 13 At3g20290 "calcium-binding EF hand family protein similar to EH-domain containing protein 1 from {Mus musculus} SP|Q9WVK4 and {Homo sapiens} SP|Q9H4M9, receptor-mediated endocytosis 1 from [Caenorhabditis elegans] GI:13487775, GI:13487777, GI:13487779; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 10 2 13 14 At3g20330 "aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) identical to SP|P49077 Aspartate carbamoyltransferase, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase) {Arabidopsis thaliana}" 10 2 13 15 At3g20500 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 10 2 13 16 At3g20555 hypothetical protein 10 2 13 17 At3g20730 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 2 13 18 At3g20790 "oxidoreductase family protein weak similarity to SP|Q07982 Glucose--fructose oxidoreductase precursor (EC 1.1.99.28) {Zymomonas mobilis}; contains Pfam profiles PF01408: Oxidoreductase family NAD-binding Rossmann fold, PF02894: Oxidoreductase family C-terminal alpha/beta domain" 10 2 13 19 At3g20940 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]; similar to cytochrome P450 (SP:H71417) [Arabidopsis thaliana] 10 2 13 20 At3g21055 "photosystem II 5 kD protein, putative identical to Swiss-Prot:Q39195 photosystem II 5 kDa protein, chloroplast precursor (PSII-T) [Arabidopsis thaliana]" 10 2 13 21 At3g23740 expressed protein 10 2 13 22 At3g23800 selenium-binding family protein contains Pfam profile: PF05694 56kDa selenium binding protein (SBP56) 10 2 13 23 At3g23960 F-box family protein contains F-box domain Pfam:PF00646 10 2 13 24 At3g24020 disease resistance-responsive family protein contains similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 10 2 13 25 At3g24170 "glutathione reductase, putative identical to GB:P48641 from [Arabidopsis thaliana]" 10 2 14 1 At3g24225 "CLE19, putative CLAVATA3/ESR-Related 19 (CLE19)" 10 2 14 2 At3g24380 "hypothetical protein similar to At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 10 2 14 3 At3g24460 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 10 2 14 4 At3g27190 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family" 10 2 14 5 At3g27250 expressed protein 10 2 14 6 At3g27400 pectate lyase family protein similar to pectate lyase GP:7547009 from [Vitis vinifera]; contains Pfam profile: PF00544 pectate lyase 10 2 14 7 At3g27440 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family" 10 2 14 8 At3g27620 "alternative oxidase 1c, mitochondrial (AOX1C) identical to alternative oxidase 1c precursor GB:O22048 [SP|O22048] from [Arabidopsis thaliana]" 10 2 14 9 At3g27680 self-incompatibility protein-related contains similarity to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 10 2 14 10 At3g27880 expressed protein 10 2 14 11 At3g27930 expressed protein 10 2 14 12 At3g32050 hypothetical protein 10 2 14 13 At3g32130 hypothetical protein 10 2 14 14 At3g32900 "Ulp1 protease family protein similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210" 10 2 14 15 At3g32980 peroxidase 32 (PER32) (P32) (PRXR3) identical to SP|Q9LHB9 Peroxidase 32 precursor (EC 1.11.1.7) (Atperox P32) (PRXR3) (ATP16a) {Arabidopsis thaliana} 10 2 14 16 At3g42100 "AT hook motif-containing protein-related very low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}; weak hit to Pfam profile PF02178: AT hook motif" 10 2 14 17 At3g42150 expressed protein 10 2 14 18 At3g42400 "hypothetical protein various predicted proteins, Arabadopsis thaliana" 10 2 14 19 At3g42460 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 10 2 14 20 At3g45570 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 10 2 14 21 At3g45630 RNA recognition motif (RRM)-containing protein similar to SP|P34909 General negative regulator of transcription subunit 4 {Saccharomyces cerevisiae}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 2 14 22 At3g45790 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 2 14 23 At3g45850 "kinesin motor protein-related kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017" 10 2 14 24 At3g46030 "histone H2B, putative strong similarity to histone H2B Arabidopsis thaliana GI:2407802, Gossypium hirsutum SP|O22582, Lycopersicon esculentum GI:3021489; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 10 2 14 25 At3g46090 "zinc finger (C2H2 type) family protein (ZAT7) identical to zinc finger protein ZAT7 [Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 2 15 1 At3g46280 protein kinase-related contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 10 2 15 2 At3g46340 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 2 15 3 At3g49130 hypothetical protein 10 2 15 4 At3g49190 condensation domain-containing protein contains Pfam profile PF00668: Condensation domain 10 2 15 5 At3g49350 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 10 2 15 6 At3g49410 transcription factor-related contains weak similarity to transcription factor IIIC63 (GI:5281316) [Homo sapiens] 10 2 15 7 At3g49590 expressed protein 10 2 15 8 At3g49650 kinesin motor protein-related several kinesin-like proteins 10 2 15 9 At3g49830 DNA helicase-related similar to DNA helicase GI:4521249 from [Mus musculus] 10 2 15 10 At3g49890 "expressed protein lea32, Arabidopsis thaliana, EMBL:ATH131342" 10 2 15 11 At3g52600 "beta-fructosidase, putative / beta-fructofuranosidase, putative similar to beta-fructofuranosidase [Daucus carota] GI:18324" 10 2 15 12 At3g52640 nicastrin-related contains weak similarity to Nicastrin precursor (Swiss-Prot:Q92542) [Homo sapiens] 10 2 15 13 At3g52790 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 10 2 15 14 At3g52850 "vacuolar sorting receptor, putative nearly identical to vacuolar sorting receptor homolog (GP:1737218) [Arabidopsis thaliana]" 10 2 15 15 At3g52990 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Glycine max] SWISS-PROT:Q42806" 10 2 15 16 At3g53050 galactose-binding lectin family protein contains Pfam domain PF02140: Galactose binding lectin domain 10 2 15 17 At3g53230 "cell division cycle protein 48, putative / CDC48, putative very strong similarity to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF02359: Cell division protein 48 (CDC48) N-terminal domain" 10 2 15 18 At3g53270 "expressed protein endopeptidase Clp ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079" 10 2 15 19 At3g55860 "hypothetical protein predicted protein, Arabidopsis thaliana" 10 2 15 20 At3g55900 "F-box family protein putative protein, Arabidopsis thaliana ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250" 10 2 15 21 At3g56080 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 10 2 15 22 At3g56130 biotin/lipoyl attachment domain-containing protein low similarity to SP|Q06881 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.}; contains Pfam profile PF00364: Biotin-requiring enzyme 10 2 15 23 At3g56310 "alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative similar to alpha-galactosidase SP:Q42656 from [Coffea arabica]" 10 2 15 24 At3g56360 "expressed protein unknown protein 110K5.12 - Sorghum bicolor, TREMBL:AF124045_5" 10 2 15 25 At3g56540 "serine carboxypeptidase, putative similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) {Hordeum vulgare}; contains Pfam profile PF0450 serine carboxypeptidase" 10 2 16 1 At3g56600 phosphatidylinositol 3- and 4-kinase family protein low similarity to 55 kDa type II phosphatidylinositol 4-kinase [Rattus norvegicus] GI:13660755; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 10 2 16 2 At3g59420 "receptor protein kinase, putative (ACR4) identical to putative receptor protein kinase ACR4 [Arabidopsis thaliana] GI:20302590; contains protein kinase domain, Pfam:PF00069" 10 2 16 3 At3g59470 far-red impaired responsive family protein / FAR1 family protein weak similarity to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF03101: FAR1 family 10 2 16 4 At3g59660 "C2 domain-containing protein / GRAM domain-containing protein low similarity to GLUT4 vesicle protein [Rattus norvegicus] GI:4193489; contains Pfam profiles PF00168: C2 domain, PF02893: GRAM domain" 10 2 16 5 At3g59700 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733" 10 2 16 6 At3g59870 "expressed protein hypothetical protein F6E13.7 - Arabidopsis thaliana, PIR:T00674" 10 2 16 7 At3g59910 expressed protein 10 2 16 8 At3g60070 lactose permease-related contains weak similarity to Lactose permease (Lactose-proton symport) (Lactose transport protein). (Swiss-Prot:O33814) [Staphylococcus xylosus] 10 2 16 9 At3g60130 "glycosyl hydrolase family 1 protein / beta-glucosidase, putative (YLS1) contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina]; identical to cDNA YLS1 mRNA for beta-glucosidase, partial cds GI:13122279" 10 2 16 10 At3g62840 "small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative similar to small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2) [Mus musculus] SWISS-PROT:P43330" 10 2 16 11 At3g62900 expressed protein ; expression supported by MPSS 10 2 16 12 At3g63080 "glutathione peroxidase, putative phospholipid-hydroperoxide glutathione peroxidase, spinach, PIR:JC5619" 10 2 16 13 At3g63140 "mRNA-binding protein, putative similar to mRNA binding protein precursor (GI:26453355) [Lycopersicon esculentum]" 10 2 16 14 At3g63270 expressed protein 10 2 16 15 At3g63310 expressed protein low similarity to N-methyl-D-aspartate receptor-associated protein [Drosophila melanogaster] GI:567104; contains Pfam profile PF01027: Uncharacterized protein family UPF0005 10 2 16 16 At3g63450 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 2 16 17 At3g63490 "ribosomal protein L1 family protein ribosomal protein L1, S.oleracea, EMBL:SORPL1" 10 2 16 18 At4g02340 "epoxide hydrolase, putative similar to epoxide hydrolases from Glycine max GI:2764806, Solanum tuberosum GI:407938; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 2 16 19 At4g02400 U3 ribonucleoprotein (Utp) family protein contains Pfam profile: PF04615 Utp14 protein 10 2 16 20 At4g02550 expressed protein 10 2 16 21 At4g02590 "basic helix-loop-helix (bHLH) family protein similar to A. thaliana putative protein F6I18.110, GenBank accession number 2980768" 10 2 16 22 At4g02740 F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein FBL2 (GI:6063090) [Homo sapiens] 10 2 16 23 At4g02800 expressed protein similar to A. thaliana hypothetical protein T6B20.12 (1946366) 10 2 16 24 At4g02970 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 10 2 16 25 At4g03030 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 2 17 1 At4g07521 hypothetical protein 10 2 17 2 At4g07666 hypothetical protein 10 2 17 3 At4g08025 hypothetical protein 10 2 17 4 At4g08113 "myosin heavy chain-related similar to Myosin heavy chain, skeletal muscle, extraocular (MyHC-eo) (SP:Q9UKX3) {Homo sapiens}" 10 2 17 5 At4g08270 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 10 2 17 6 At4g08310 "expressed protein glutamic acid-rich protein precursor - Plasmodium falciparum, PIR2:A54514" 10 2 17 7 At4g08480 "mitogen-activated protein kinase, putative similar to mitogen-activated protein kinase [Arabidopsis thaliana] gi|1255448|dbj|BAA09057; contains Pfam PF00069: Protein kinase domain" 10 2 17 8 At4g08550 "glutaredoxin-related contains Pfam profile PF04784: Protein of unknown function, DUF547, weak hit to PF00462: Glutaredoxin" 10 2 17 9 At4g11370 "zinc finger (C3HC4-type RING finger) family protein strong similarity to RING-H2 finger protein RHA1a [Arabidopsis thaliana] GI:3790554; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 17 10 At4g11420 eukaryotic translation initiation factor 3 subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana] SWISS-PROT:Q9LD55 10 2 17 11 At4g11630 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 10 2 17 12 At4g11680 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|Q9WTV7 RING finger protein 12 (LIM domain interacting RING finger protein) {Mus musculus}; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 17 13 At4g11840 phospholipase D gamma 3 / PLD gamma 3 (PLDGAMMA3) identical to phospholipase D gamma 3 sp:Q9T052 from [Arabidopsis thaliana] 10 2 17 14 At4g11900 "S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding)" 10 2 17 15 At4g12040 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 10 2 17 16 At4g12100 "expressed protein cullin-4A - Homo sapiens, PID:d1034112" 10 2 17 17 At4g14670 "heat shock protein 101, putative / HSP101, putative similar to heat shock protein 101 GI:6715468 GB:AAF26423 from [Arabidopsis thaliana]" 10 2 17 18 At4g14713 expressed protein 10 2 17 19 At4g14840 expressed protein 10 2 17 20 At4g14900 hydroxyproline-rich glycoprotein family protein 10 2 17 21 At4g15030 expressed protein 10 2 17 22 At4g15070 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 2 17 23 At4g15215 ABC transporter family protein similar to PDR5-like ABC transporter [Spirodela polyrhiza] GI:1514643; contains Pfam profile PF00005: ABC transporter 10 2 17 24 At4g15260 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 2 17 25 At4g17720 RNA recognition motif (RRM)-containing protein 10 2 18 1 At4g17780 F-box family protein contains F-box domain Pfam:PF00646 10 2 18 2 At4g17950 DNA-binding family protein contains Pfam PF03479: Domain of unknown function (DUF296); contains Pfam PF02178: AT hook motif; 10 2 18 3 At4g18010 inositol polyphosphate 5-phosphatase II (IP5PII) nearly identical to inositol polyphosphate 5-phosphatase II [Arabidopsis thaliana] GI:10444263 isoform contains an AT-acceptor splice site at intron 6 10 2 18 4 At4g18150 hypothetical protein 10 2 18 5 At4g18210 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007, contains Pfam profile PF03151: Domain of unknown function, DUF250" 10 2 18 6 At4g18360 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414" 10 2 18 7 At4g18380 F-box family protein contains F-box domain Pfam:PF00646 10 2 18 8 At4g21170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 18 9 At4g21215 expressed protein 10 2 18 10 At4g21370 "S-locus protein kinase, putative similar to SRKa [Arabidopsis lyrata] gi|13620927|dbj|BAB40986; contains Pfam domains PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding)" 10 2 18 11 At4g21440 myb family transcription factor (MYB102) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 2 18 12 At4g21570 expressed protein contains Pfam profile PF03619: Domain of unknown function 10 2 18 13 At4g21620 glycine-rich protein 10 2 18 14 At4g21800 "ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein" 10 2 18 15 At4g21850 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 10 2 18 16 At4g24400 CBL-interacting protein kinase 8 (CIPK8) identical to CBL-interacting protein kinase 8 [Arabidopsis thaliana] GP|13249115|gb|AAK16683; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain 10 2 18 17 At4g24440 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) identical to transcription initiation factor IIA gamma chain SP:Q39236 from [Arabidopsis thaliana]; 10 2 18 18 At4g24580 "pleckstrin homology (PH) domain-containing protein-related / RhoGAP domain-containing protein contains Pfam domain, PF00620: RhoGAP domain" 10 2 18 19 At4g24640 invertase/pectin methylesterase inhibitor family protein annotation temporarily based on supporting cDNA gi|4097527|gb|U63898.1|U63898 10 2 18 20 At4g24780 pectate lyase family protein similar to pectate lyase GP:14289169 from [Salix gilgiana] 10 2 18 21 At4g24830 arginosuccinate synthase family contains Pfam profile: PF00764 arginosuccinate synthase 10 2 18 22 At4g25010 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 10 2 18 23 At4g25070 expressed protein ; expression supported by MPSS 10 2 18 24 At4g27640 importin beta-2 subunit family protein low similarity to importin 4 GI:18700635 from [Homo sapiens] 10 2 18 25 At4g27670 "25.3 kDa small heat shock protein, chloroplast precursor (HSP25.3-P) identical to small heat shock protein, chloroplast precursor SP:P31170 from [Arabidopsis thaliana]; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 10 2 19 1 At4g27830 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 10 2 19 2 At4g27890 nuclear movement family protein contains Pfam profile: PF03593 nuclear movement protein 10 2 19 3 At4g28030 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 10 2 19 4 At4g28085 expressed protein 10 2 19 5 At4g28240 "wound-responsive protein-related wound-induced protein - tomato (fragment), PIR2:S19773" 10 2 19 6 At4g28300 hydroxyproline-rich glycoprotein family protein 10 2 19 7 At4g30910 "cytosol aminopeptidase family protein contains Pfam profiles: PF00883 cytosol aminopeptidase family catalytic domain, PF02789: cytosol aminopeptidase family N-terminal domain" 10 2 19 8 At4g30960 CBL-interacting protein kinase 6 (CIPK6) identical to CBL-interacting protein kinase 6 [Arabidopsis thaliana] gi|9280634|gb|AAF86505 10 2 19 9 At4g31080 expressed protein 10 2 19 10 At4g31120 Skb1 methyltransferase family protein contains Pfam profile: PF05185 Skb1 methyltransferase 10 2 19 11 At4g31290 ChaC-like family protein contains Pfam profile: PF04752 ChaC-like protein 10 2 19 12 At4g31350 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 10 2 19 13 At4g31510 expressed protein low similarity to MTD1 [Medicago truncatula] GI:9294810 10 2 19 14 At4g31550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 10 2 19 15 At4g34080 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 10 2 19 16 At4g34120 CBS domain-containing protein contains Pfam profile PF00571: CBS domain 10 2 19 17 At4g34240 "aldehyde dehydrogenase (ALDH3) similar to aldehyde dehydrogenase [Arabidopsis thaliana] gi|17065876|emb|CAC84903; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein; identical to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875, aldehyde dehydrogenase [Arabidopsis thaliana] GI:17065876" 10 2 19 18 At4g34270 "TIP41-like family protein contains Pfam PF04176: TIP41-like family; identical to cDNA putative cytoskeletal protein mRNA, partial cds GI:5031529" 10 2 19 19 At4g34430 "DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type" 10 2 19 20 At4g34480 "glycosyl hydrolase family 17 protein similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 10 2 19 21 At4g34650 "farnesyl-diphosphate farnesyltransferase 2 / squalene synthase 2 (SQS2) nearly identical to GI:2228795; synonomous with farnesyl-diphosphate farnesyltransferase, FPP:FPP farnesyltransferase, and squalene synthetase" 10 2 19 22 At4g34710 arginine decarboxylase 2 (SPE2) identical to SP|O23141 Arginine decarboxylase 2 (EC 4.1.1.19) (ARGDC 2) (ADC 2) (ADC-N) {Arabidopsis thaliana} 10 2 19 23 AT5G57480 PC-1 B03 10 2 19 24 3XSSC PC-1 B15 10 2 19 25 AT1G29930 PC-1 F03 10 2 20 1 3XSSC PC-1 F15 10 2 20 2 AT3G44150 PC-1 J03 10 2 20 3 3XSSC PC-1 J15 10 2 20 4 AT4G00810 PC-1 N03 10 2 20 5 3XSSC PC-1 N15 10 2 20 6 At4g37330 cytochrome P450 family protein 10 2 20 7 At4g37400 "cytochrome P450 family protein similar to cytochrome P450 monooxygenase CYP91A2, Arabidopsis thaliana, D78607" 10 2 20 8 At4g37570 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 10 2 20 9 At4g37640 "calcium-transporting ATPase 2, plasma membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical to SP|O81108 Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) {Arabidopsis thaliana}" 10 2 20 10 At4g37790 homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 identical to homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22) (SP:P46604) [Arabidopsis thaliana] 10 2 20 11 At4g37850 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 2 20 12 At4g38040 exostosin family protein contains Pfam profile: PF03016 Exostosin family 10 2 20 13 At4g38080 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family member: At2g22510 [Arabidopsis thaliana]" 10 2 20 14 At5g01480 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 2 20 15 At5g01520 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 20 16 At5g01670 "aldose reductase, putative similar to aldose reductase [Hordeum vulgare][GI:728592], aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944]" 10 2 20 17 At5g01730 expressed protein 10 2 20 18 At5g01890 "leucine-rich repeat transmembrane protein kinase, putative leucine-rich receptor-like protein (LRPKm1) - Malus domestica, EMBL:AF053127" 10 2 20 19 At5g01950 "leucine-rich repeat transmembrane protein kinase, putative receptor protein kinases" 10 2 20 20 At5g02090 expressed protein 10 2 20 21 At5g02150 expressed protein 10 2 20 22 At5g04910 hypothetical protein ; expression supported by MPSS 10 2 20 23 At5g04950 "nicotianamine synthase, putative similar to nicotianamine synthase [Lycopersicon esculentum][GI:4753801], nicotianamine synthase 2 [Hordeum vulgare][GI:4894912]" 10 2 20 24 At5g05100 expressed protein 10 2 20 25 At5g05160 "leucine-rich repeat transmembrane protein kinase, putative " 10 2 21 1 At5g05310 expressed protein 10 2 21 2 At5g05360 expressed protein similar to unknown protein (pir||T02500) 10 2 21 3 At5g05520 "outer membrane OMP85 family protein contains Pfam profile PF01103: outer membrane protein, OMP85 family" 10 2 21 4 At5g05560 "E3 ubiquitin ligase, putative E3, ubiquitin ligase; contains similarity to Apc1/Tsg24 protein, the largest subunit of human anaphase-promoting complex (APC/C) GI:11967711 from [Homo sapiens]" 10 2 21 5 At5g08200 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain 10 2 21 6 At5g08260 "serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; carboxypeptidase D - Triticum aestivum, PIR:A29639" 10 2 21 7 At5g08410 "ferredoxin-thioredoxin reductase, putative similar to ferredoxin-thioredoxin reductase, variable chain (FTR-V, Ferredoxin- thioredoxin reductase subunit A, FTR-A) [Zea mays] SWISS-PROT:P80680" 10 2 21 8 At5g08460 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 10 2 21 9 At5g08580 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 10 2 21 10 At5g08640 flavonol synthase 1 (FLS1) identical to SP|Q96330; contains PF03171 2OG-Fe(II) oxygenase superfamily 10 2 21 11 At5g09230 "transcriptional regulator Sir2 family protein contains Pfam domain PF02146: transcriptional regulator, Sir2 family;" 10 2 21 12 At5g09260 SNF7-related contains similarity to nuclear protein SNF7 [Saccharomyces cerevisiae] SWISS-PROT:P39929 10 2 21 13 At5g12000 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 2 21 14 At5g12040 "carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 10 2 21 15 At5g12220 las1-like family protein similar to Las1p [Saccharomyces cerevisiae] GI:495504; contains Pfam profile PF04031: Las1-like 10 2 21 16 At5g12270 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similarity to ripening protein E8, tomato, PIR:S01642; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 10 2 21 17 At5g12420 expressed protein 10 2 21 18 At5g12480 calmodulin-domain protein kinase isoform 7 (CPK7) identical to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247 10 2 21 19 At5g13000 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 10 2 21 20 At5g13070 MSF1-like family protein similar to px19 [Gallus gallus] GI:969170; contains Pfam profile PF04707: MSF1-like conserved region 10 2 21 21 At5g15810 "N2,N2-dimethylguanosine tRNA methyltransferase family protein similar to SP|Q9P804 N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) {Schizosaccharomyces pombe}; contains Pfam profile PF02005: N2,N2-dimethylguanosine tRNA methyltransferase" 10 2 21 22 At5g15860 expressed protein 10 2 21 23 At5g16030 expressed protein 10 2 21 24 At5g16090 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 10 2 21 25 At5g16270 "Rad21/Rec8-like family protein weak similarity to cohesion family protein SYN2 [Arabidopsis thaliana] GI:12006360; contains Pfam profiles PF04824: Conserved region of Rad21 / Rec8 like protein, PF04825: N terminus of Rad21 / Rec8 like protein; supporting cDNA gi|18157648|gb|AF400129.1|AF400129" 10 2 22 1 At5g16300 expressed protein 10 2 22 2 At5g16450 dimethylmenaquinone methyltransferase family protein similar to bacterial S-adenosylmethionine:2-demethylmenaquinone methyltransferases; contains Pfam profile PF03737: Dimethylmenaquinone methyltransferase 10 2 22 3 At5g16510 "reversibly glycosylated polypeptide, putative similar to reversibly glycosylatable polypeptide (RGP1) [Pisum sativum] GI:2130521; contains Pfam profile PF03214: Reversibly glycosylated polypeptide" 10 2 22 4 At5g19090 "heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3" 10 2 22 5 At5g19130 "GPI transamidase component family protein / Gaa1-like family protein contains Pfam profile: PF04114 Gaa1-like, GPI transamidase component" 10 2 22 6 At5g19290 esterase/lipase/thioesterase family protein low similarity to monoglyceride lipase [Homo sapiens] GI:14594904; contains Interpro entry IPR000379 10 2 22 7 At5g19330 "armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651" 10 2 22 8 At5g19490 repressor protein-related similar to repressor protein [Oryza sativa] GI:18481624 10 2 22 9 At5g19550 "aspartate aminotransferase, cytoplasmic isozyme 1 / transaminase A (ASP2) identical to SP|P46645 Aspartate aminotransferase, cytoplasmic isozyme 1 (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}" 10 2 22 10 At5g19730 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 10 2 22 11 At5g19790 AP2 domain-containing protein RAP2.11 (RAP2.11) identical to AP2 domain containing protein RAP2.11 GI:2281647 from [Arabidopsis thaliana] ;contains Pfam profile: PF00847 AP2-domain 10 2 22 12 At5g23110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 2 22 13 At5g23170 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 2 22 14 At5g23310 superoxide dismutase [Fe] / iron superoxide dismutase 3 (FSD3) identical to iron superoxide dismutase 3 [Arabidopsis thaliana] gi|3273757|gb|AAC24834 10 2 22 15 At5g23370 "GRAM domain-containing protein / ABA-responsive protein-related contains similarity to ABA-responsive protein in barley (GI:4103635) [Hordeum vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam PF02893: GRAM domain" 10 2 22 16 At5g23490 expressed protein 10 2 22 17 At5g23550 expressed protein 10 2 22 18 At5g23740 40S ribosomal protein S11 (RPS11C) 10 2 22 19 At5g23780 agenet domain-containing protein contains Pfam PF05641: Agenet domain 10 2 22 20 At5g26710 "glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative identical to gi:3435196" 10 2 22 21 At5g26670 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 10 2 22 22 At5g26780 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative strong similarity to SP|P50433 Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) {Solanum tuberosum}; contains Pfam profile PF00464: serine hydroxymethyltransferase" 10 2 22 23 At5g26820 ferroportin-related low similarity to ferroportin1 [Danio rerio] GI:7109245 10 2 22 24 At5g27000 kinesin motor protein-related non-consensus AT donor splice site at exon 12; non-consensus AC acceptor splice site at exon 13 10 2 22 25 At5g27070 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL53 10 2 23 1 At5g27270 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 2 23 2 At5g27330 expressed protein 10 2 23 3 At5g35370 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 10 2 23 4 At5g35450 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 10 2 23 5 At5g35604 hypothetical protein 10 2 23 6 At5g35640 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 10 2 23 7 At5g35760 expressed protein ; expression supported by MPSS 10 2 23 8 At5g35810 hypothetical protein 10 2 23 9 At5g35995 F-box family protein contains F-box domain Pfam:PF00646 10 2 23 10 At5g36040 hypothetical protein 10 2 23 11 At5g39250 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 2 23 12 At5g39310 "expansin, putative (EXP24) similar to expansin - Prunus armeniaca, EMBL:U93167; alpha-expansin gene family, PMID:11641069" 10 2 23 13 At5g39490 F-box family protein contains Pfam:PF00646 F-box domain ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 2 23 14 At5g39550 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 10 2 23 15 At5g39730 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to SP|P54121 AIG2 protein {Arabidopsis thaliana} 10 2 23 16 At5g39790 "5'-AMP-activated protein kinase beta-1 subunit-related contains similarity to Swiss-Prot:P80387 5'-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]" 10 2 23 17 At5g39950 thioredoxin H-type 2 (TRX-H-2) (Gif2) identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA for thioredoxin GI:992963 10 2 23 18 At5g40010 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 10 2 23 19 At5g42800 dihydroflavonol 4-reductase (dihydrokaempferol 4-reductase) (DFR) nearly identical to GI:166686 10 2 23 20 At5g42830 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 10 2 23 21 At5g42950 GYF domain-containing protein contains Pfam profile: PF02213 GYF domain 10 2 23 22 At5g42980 thioredoxin H-type 3 (TRX-H-3) (GIF1) identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3) {Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA for thioredoxin GI:992961 10 2 23 23 At5g43160 expressed protein contains Pfam profile: PF04484 family of unknown function (DUF566) 10 2 23 24 At5g43200 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 23 25 At5g43380 serine/threonine protein phosphatase PP1 isozyme 7 (TOPP7) identical to SP|O82733 Serine/threonine protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) {Arabidopsis thaliana} 10 2 24 1 At5g43420 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 2 24 2 At5g46010 homeobox-leucine zipper transcription factor family protein similar to to PRESSED FLOWER (GP:17907768) {Arabidopsis thaliana}; similar to HB2 homeodomain protein (GI:3955021) {Populus tremula x Populus tremuloides} 10 2 24 3 At5g46060 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599; expression supported by MPSS" 10 2 24 4 At5g46170 F-box family protein contains F-box domain Pfam:PF00646 10 2 24 5 At5g46230 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 10 2 24 6 At5g46380 hypothetical protein 10 2 24 7 At5g46430 60S ribosomal protein L32 (RPL32B) 10 2 24 8 At5g46590 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 10 2 24 9 At5g46630 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 10 2 24 10 At5g49250 hypothetical protein 10 2 24 11 At5g49310 "importin alpha-1 subunit, putative similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 10 2 24 12 At5g49480 sodium-inducible calcium-binding protein (ACP1) / sodium-responsive calcium-binding protein (ACP1) identical to NaCl-inducible Ca2+-binding protein GI:2352828 from [Arabidopsis thaliana] 10 2 24 13 At5g49530 SIN-like family protein low similarity to Sex-lethal interactor [Drosophila melanogaster] GI:6049274; contains Pfam profile PF04801: Sin-like protein conserved region 10 2 24 14 At5g49670 hypothetical protein 10 2 24 15 At5g49710 expressed protein similar to unknown protein (pir||T05575) 10 2 24 16 At5g49890 chloride channel protein (CLC-c) identical to gi:1742956 10 2 24 17 At5g49945 expressed protein strong similarity to unknown protein (pir||T09896) 10 2 24 18 At5g52680 heavy-metal-associated domain-containing protein low similarity to pneumococcal surface protein A PspA [Streptococcus pneumoniae] GI:7800654; contains Pfam profile PF00403: Heavy-metal-associated domain 10 2 24 19 At5g52740 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 10 2 24 20 At5g52920 "pyruvate kinase, putative similar to pyruvate kinase isozyme G, chloroplast precursor [Nicotiana tabacum] SWISS-PROT:Q40546" 10 2 24 21 At5g52970 thylakoid lumen 15.0 kDa protein SP:Q9LVV5; similar to unknown protein (pir |S77462) 10 2 24 22 At5g53110 expressed protein 10 2 24 23 At5g53160 expressed protein similar to unknown protein (pir||T02893) 10 2 24 24 At5g53340 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 10 2 24 25 At5g53400 nuclear movement family protein contains Pfam profile: PF03593 nuclear movement protein 10 2 25 1 At5g56070 hypothetical protein 10 2 25 2 At5g56120 expressed protein similar to unknown protein (dbj|BAA81760.1) 10 2 25 3 At5g56280 "COP9 signalosome subunit 6 / CSN subunit 6 (CSN6A) identical to CSN complex subunit 6A [Arabidopsis thaliana] GI:18056665, COP9 complex subunit 6 [Arabidopsis thaliana] GI:15809663; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family; identical to cDNA CSN complex subunit 6A (CSN6A) GI:18056664" 10 2 25 4 At5g56330 "carbonic anhydrase family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase" 10 2 25 5 At5g56500 "chaperonin, putative similar to SWISS-PROT:P08927- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) [Pisum sativum]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 10 2 25 6 At5g56560 F-box family protein contains F-box domain Pfam:PF00646 10 2 25 7 At5g56740 histone acetyltransferase family protein similar to histone acetyltransferase HAT B [Zea mays] GI:5579441; identical to cDNA histone acetyltransferase partial cds GI:21637256 10 2 25 8 At5g56800 hypothetical protein 10 2 25 9 At5g59330 hypothetical protein 10 2 25 10 At5g59390 XH/XS domain-containing protein contains Pfam domain PF03469: XH domain and PF03468: XS domain 10 2 25 11 At5g59520 "zinc transporter (ZIP2) identical to zinc transporter ZIP2 [Arabidopsis thaliana] gi|3252868|gb|AAC24198; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 10 2 25 12 At5g59580 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 2 25 13 At5g59770 expressed protein 10 2 25 14 At5g59820 zinc finger (C2H2 type) family protein (ZAT12) identical to zinc finger protein ZAT12 [Arabidopsis thaliana] gi|1418325|emb|CAA67232 10 2 25 15 At5g59940 "DC1 domain-containing protein / UV-B light-insensitive protein, putative similar to ULI3 (UV-B light insensitive) [Arabidopsis thaliana] GI:17225050; contains Pfam profile PF03107: DC1 domain" 10 2 25 16 At5g59980 RNase P subunit p30 family protein contains Pfam PF01876: RNase P subunit p30 10 2 25 17 At5g62670 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H(+)-transporting ATPase from Nicotiana plumbaginifolia [SP|Q08435, SP|Q08436], Lycopersicon esculentum [GI:5901757, SP|P22180], Solanum tuberosum [GI:435003]; contains InterPro accession IPR001757: ATPase, E1-E2 type" 10 2 25 18 At5g62720 "integral membrane HPP family protein contains Pfam domain, PF04982: HPP family" 10 2 25 19 At5g62890 "permease, putative similar to permease 1 [Zea mays] GI:7844006; contains Pfam profile: PF00860 Xanthine/uracil permeases family; identical to cDNA putative permease 1 (MQB2.21) GI:21326024" 10 2 25 20 At5g62930 GDSL-motif lipase/hydrolase family protein similar to SP|P41734 Isoamyl acetate-hydrolyzing esterase (EC 3.1.-.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 10 2 25 21 At5g63090 "LOB domain protein / lateral organ boundaries protein (LOB) identical to LOBa [Arabidopsis thaliana] GI:17484100, SP|Q9FML4 LATERAL ORGAN BOUNDARIES protein {Arabidopsis thaliana}" 10 2 25 22 At5g63120 "ethylene-responsive DEAD box RNA helicase, putative (RH30) strong similarity to ethylene-responsive RNA helicase [Lycopersicon esculentum] GI:5669638; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 10 2 25 23 At5g63290 coproporphyrinogen oxidase-related low similarity to coproporphyrinogen III oxidase from Geobacillus stearothermophilus [GI:2104798]; contains Pfam profile PF04055: radical SAM domain protein 10 2 25 24 At5g63350 expressed protein 10 2 25 25 At5g65910 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 10 2 26 1 At5g65960 expressed protein 10 2 26 2 At5g66050 expressed protein 10 2 26 3 At5g66070 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 2 26 4 At5g66230 expressed protein 10 2 26 5 At5g66250 kinectin-related contains weak similarity to kinectin (GI:3766232) [Vulpes vulpes] 10 2 26 6 At5g66380 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 10 2 26 7 At5g66440 expressed protein 10 2 26 8 3xSSC 3xSSC 10 2 26 9 3xSSC 3xSSC 10 2 26 10 3xSSC 3xSSC 10 2 26 11 3xSSC 3xSSC 10 2 26 12 3xSSC 3xSSC 10 2 26 13 3xSSC 3xSSC 10 2 26 14 3xSSC 3xSSC 10 2 26 15 3xSSC 3xSSC 10 2 26 16 At3g45570 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 10 2 26 17 At3g45630 RNA recognition motif (RRM)-containing protein similar to SP|P34909 General negative regulator of transcription subunit 4 {Saccharomyces cerevisiae}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 2 26 18 At3g45790 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 2 26 19 At3g45850 "kinesin motor protein-related kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017" 10 2 26 20 At3g46030 "histone H2B, putative strong similarity to histone H2B Arabidopsis thaliana GI:2407802, Gossypium hirsutum SP|O22582, Lycopersicon esculentum GI:3021489; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 10 2 26 21 At3g46090 "zinc finger (C2H2 type) family protein (ZAT7) identical to zinc finger protein ZAT7 [Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 2 26 22 At3g46280 protein kinase-related contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 10 2 26 23 At3g46340 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 2 26 24 Blank Blank 10 2 26 25 Blank Blank 10 3 1 1 atc01 Randomly generated negative control 10 3 1 2 atc07 Randomly generated negative control 10 3 1 3 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 10 3 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 10 3 1 5 Alien3 Control: Stratagene Spotreport Alien Oligo 10 3 1 6 Alien9 Control: Stratagene Spotreport Alien Oligo 10 3 1 7 atc05 Randomly generated negative control 10 3 1 8 atc11 Randomly generated negative control 10 3 1 9 At1g01100 60S acidic ribosomal protein P1 (RPP1A) similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from [Arabidopsis thaliana] 10 3 1 10 At1g01140 CBL-interacting protein kinase 9 (CIPK9) identical to CBL-interacting protein kinase 9 [Arabidopsis thaliana] gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 10 3 1 11 At1g01320 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|P46825 Kinesin light chain (KLC) {Loligo pealeii}; contains Pfam profile PF00515: TPR Domain 10 3 1 12 At1g01390 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 3 1 13 At1g01560 "mitogen-activated protein kinase, putative / MAPK, putative (MPK11) similar to MAP kinase 5 GI:4239889 from [Zea mays]; mitogen-activated protein kinase (MAPK)(AtMPK11), PMID:12119167" 10 3 1 14 At1g01620 plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB) identical to plasma membrane intrinsic protein 1c SP:Q08733 from [Arabidopsis thaliana] 10 3 1 15 At1g01780 "LIM domain-containing protein similar to PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain protein PLIM1 [Nicotiana tabacum] GI:5932418; contains Pfam profile PF00412: LIM domain" 10 3 1 16 At1g01840 expressed protein 10 3 1 17 At1g04430 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 10 3 1 18 At1g04490 expressed protein 10 3 1 19 At1g04630 expressed protein 10 3 1 20 At1g04670 expressed protein ; expression supported by MPSS 10 3 1 21 At1g04870 protein arginine N-methyltransferase family protein similar to SP|Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens} 10 3 1 22 At1g04910 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 10 3 1 23 At1g05060 expressed protein 10 3 1 24 At1g05100 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 1 25 At1g07700 thioredoxin family protein low similarity to thioredoxin [Gallus gallus] GI:212766; contains Pfam profile: PF00085 Thioredoxin 10 3 2 1 At1g07740 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat; possible frameshift prevents accurate annotation of the gene product 10 3 2 2 At1g07840 leucine zipper factor-related similar to charged amino acid rich leucine zipper factor-1 (GI:12061569) {Mus musculus} 10 3 2 3 At1g07890 "L-ascorbate peroxidase 1, cytosolic (APX1) identical to SP|Q05431 L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP) {Arabidopsis thaliana}, L-ascorbate peroxidase [Arabidopsis thaliana] gi|16173|emb|CAA42168; strong similarity to cytosolic ascorbate peroxidase [Spinacia oleracea] gi|1384110|dbj|BAA12890" 10 3 2 4 At1g08020 expressed protein 10 3 2 5 At1g08065 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 10 3 2 6 At1g08200 expressed protein 10 3 2 7 At1g08270 expressed protein low similarity to SP|P46467 SKD1 protein (Vacuolar sorting protein 4b) {Mus musculus} 10 3 2 8 At1g10820 expressed protein similar to hypothetical protein GB:AAB71979 10 3 2 9 At1g10880 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 10 3 2 10 At1g11060 expressed protein 10 3 2 11 At1g11120 expressed protein 10 3 2 12 At1g11280 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954" 10 3 2 13 At1g11340 "S-locus lectin protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954" 10 3 2 14 At1g11475 "DNA-directed RNA polymerase II, putative nearly identical to DNA-directed RNA polymerase II 8.2 kDa polypeptide SP:Q39290 from [Brassica napus]" 10 3 2 15 At1g11530 "thioredoxin family protein similar to thioredoxin H-type from Arabidopsis thaliana SP|P29448, Nicotiana tabacum SP|Q07090; contains Pfam profile: PF00085 Thioredoxin" 10 3 2 16 At1g14300 expressed protein contains Pfam PF04063: Domain of unknown function (DUF383) and PF04064: Domain of unknown function (DUF384) 10 3 2 17 At1g14350 myb family transcription factor (MYB124) contains PFAM profile: PF00249 myb-like DNA binding domain 10 3 2 18 At1g14510 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 10 3 2 19 At1g14560 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 10 3 2 20 At1g14700 "purple acid phosphatase, putative contains Pfam profile: PF00149 calcineurin-like phosphoesterase; similar to purple acid phosphatase (GI:20257479) [Arabidopsis thaliana]" 10 3 2 21 At1g14760 expressed protein 10 3 2 22 At1g14890 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase GB:X85216 GI:732912 SP|Q43111 [Phaseolus vulgaris], SP|Q42534 from Arabidopsis thaliana; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 10 3 2 23 At1g14950 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 10 3 2 24 At1g17630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 2 25 At1g17690 expressed protein 10 3 3 1 At1g17810 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 10 3 3 2 At1g17870 expressed protein contains 6 transmembrane domains; similar to predicted metalloproteases 10 3 3 3 At1g18050 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein weak similarity to spliceosome-associated-protein 114 [Echinococcus multilocularis] GI:11602721; contains Pfam profile PF01805: Surp module 10 3 3 4 At1g18130 "tRNA synthetase-related / tRNA ligase-related similar to SP|O04630 Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Arabidopsis thaliana}; contains Pfam profile PF03129: Anticodon binding domain" 10 3 3 5 At1g18310 glycosyl hydrolase family 81 protein similar to beta-glucan binding protein GI:6625560 from [Phaseolus vulgaris] 10 3 3 6 At1g18360 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162,[Rattus norvegicus] GI:19697886; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 3 3 7 At1g21245 wall-associated kinase-related similar to wall-associated kinase 1 GI:3549626 from [Arabidopsis thaliana] 10 3 3 8 At1g21320 VQ motif-containing protein contains PF05678: VQ motif 10 3 3 9 At1g21480 exostosin family protein contains Pfam profile: PF03016 Exostosin family 10 3 3 10 At1g21540 "AMP-binding protein, putative strong similarity to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 9 AMPBP9 (AMPBP9) GI:20799726" 10 3 3 11 At1g21700 "SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domain PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain" 10 3 3 12 At1g21750 "protein disulfide isomerase, putative similar to SP|P29828 Protein disulfide isomerase precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform contains non-consensus GA donor splice site at intron 9" 10 3 3 13 At1g21930 expressed protein 10 3 3 14 At1g21990 F-box family protein contains F-box domain Pfam:PF00646 10 3 3 15 At1g24560 expressed protein 10 3 3 16 At1g24610 "SET domain-containing protein low similarity to SP|Q43088 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) {Pisum sativum}; contains Pfam profile PF00856: SET domain" 10 3 3 17 At1g25230 purple acid phosphatase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase; similar to purple acid phosphatase (GI:20257479) [Arabidopsis thaliana] 10 3 3 18 At1g25280 F-box family protein / tubby family protein similar to Tubby protein homolog (SP:O88808) [Rattus norvegicus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family; 10 3 3 19 At1g25420 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 10 3 3 20 At1g25480 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 10 3 3 21 At1g26120 esterase-related contains similaity to esterase 6 GI:606998 from [Drosophila simulans] and esterase GI:12584120 from [Sphingomonas elodea] 10 3 3 22 At1g26180 expressed protein 10 3 3 23 At1g29060 expressed protein 10 3 3 24 At1g29120 expressed protein 10 3 3 25 At1g29320 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to meiotic recombination protein REC14 (GI:11139242) [Homo sapiens]; similar to unknown protein GI:13623493 [Homo sapiens] 10 3 4 1 At1g29380 hypothetical protein 10 3 4 2 At1g29520 AWPM-19-like membrane family protein contains Pfam profile: PF05512 AWPM-19-like family 10 3 4 3 At1g29580 hypothetical protein 10 3 4 4 At1g29770 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 10 3 4 5 At1g29830 hypothetical protein 10 3 4 6 At1g32680 hypothetical protein 10 3 4 7 At1g32720 hypothetical protein 10 3 4 8 At1g32920 expressed protein 10 3 4 9 At1g32975 hypothetical protein 10 3 4 10 At1g33120 60S ribosomal protein L9 (RPL90B) similar to RIBOSOMAL PROTEIN L9 GB:P49209 from [Arabidopsis thaliana] 10 3 4 11 At1g33240 "trihelix DNA-binding protein, putative similar to GTL1 [Arabidopsis thaliana] GI:2664198" 10 3 4 12 At1g33420 PHD finger family protein contains Pfam profile: PF00628: PHD-finger 10 3 4 13 At1g33480 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 3 4 14 At1g42960 expressed protein 10 3 4 15 At1g43020 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 10 3 4 16 At1g43570 hypothetical protein 10 3 4 17 At1g43630 expressed protein 10 3 4 18 At1g43780 serine carboxypeptidase S10 family protein similar to serine carboxylase II-3 GB:CAA55478 GI:474392 from [Hordeum vulgare] 10 3 4 19 At1g43870 hypothetical protein similar to fructose binding protein FrcB (GI:11066207)[Sinorhizobium meliloti] 10 3 4 20 At1g44090 gibberellin 20-oxidase family protein similar to gibberellin 20-oxidase GI:4164141 from [Lactuca sativa]; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily 10 3 4 21 At1g44170 "aldehyde dehydrogenase, putative (ALDH) similar to aldehyde dehydrogenase ALDH [Craterostigma plantagineum] gi|17065918|emb|CAC84900" 10 3 4 22 At1g49230 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 10 3 4 23 At1g49290 expressed protein ; expression supported by MPSS 10 3 4 24 At1g49480 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 10 3 4 25 At1g49540 "transducin family protein / WD-40 repeat family protein similar to signal transducer and activator of transcription interacting protein 1 (GI:15929722) {Mus musculus}; similar to hypothetical protein GB:AAD43147 GI:5430747 from (Arabidopsis thaliana); contains Pfam PF00400: WD domain, G-beta repeat (11 copies, 2 weak)" 10 3 5 1 At1g49720 "ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) identical to abscisic acid responsive elements-binding factor GB:AAF27179 GI:6739274 from [Arabidopsis thaliana]; identical to cDNA abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds GI:6739273" 10 3 5 2 At1g49780 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 10 3 5 3 At1g49950 "DNA-binding protein, putative contains similarity to DNA-binding protein PcMYB1 [Petroselinum crispum] gi|2224899|gb|AAB61699" 10 3 5 4 At1g49980 UMUC-like DNA repair family protein low similarity to DNA polymerase kappa [Mus musculus] GI:14279087; contains Pfam profile PF00817: ImpB/MucB/SamB family 10 3 5 5 At1g52855 expressed protein 10 3 5 6 At1g52900 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 10 3 5 7 At1g53060 legume lectin family protein 10 3 5 8 At1g53120 RNA-binding S4 domain-containing protein 10 3 5 9 At1g53280 DJ-1 family protein similar to DJ-1 protein [Homo sapiens] GI:1780755; similar to DJ-1 beta (GI:18642508) [Drosophila melanogaster]; contains Pfam profile: PF01965 ThiJ/PfpI family; TIGRFAM TIGR01383: DJ-1 family protein 10 3 5 10 At1g53325 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to suppressor of nim1-1 (GI:22023774) [Arabidopsis thaliana] 10 3 5 11 At1g53480 expressed protein 10 3 5 12 At1g53540 "17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853) (GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res. 17 (19), 7995 (1989))" 10 3 5 13 At1g56140 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 10 3 5 14 At1g56190 "phosphoglycerate kinase, putative similar to SP|P41758 Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) {Chlamydomonas reinhardtii}; contains Pfam profile PF00162: phosphoglycerate kinase" 10 3 5 15 At1g56340 calreticulin 1 (CRT1) identical to calreticulin (crt1) GI:2052379 [Arabidopsis thaliana] 10 3 5 16 At1g56410 "heat shock cognate 70 kDa protein, putative / HSC70, putative / HSP70, putative strong similarity to heat shock cognate 70 kd protein 1 SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]" 10 3 5 17 At1g56600 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]" 10 3 5 18 At1g56670 "GDSL-motif lipase/hydrolase family protein similarity to early early nodulin ENOD8 [Medicago sativa] GI:304037, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 10 3 5 19 At1g57610 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 10 3 5 20 At1g57680 expressed protein 10 3 5 21 At1g61566 rapid alkalinization factor (RALF) family protein contains Pfam domain PF05498: Rapid ALkalinization Factor (RALF) 10 3 5 22 At1g61620 expressed protein contains Pfam profile: PF01363 FYVE zinc finger 10 3 5 23 At1g61790 OST3/OST6 family protein weak similarity to SP|Q13454 N33 protein {Homo sapiens}; contains Pfam profile PF04756: OST3 / OST6 family 10 3 5 24 At1g61840 DC1 domain-containing protein similar to hypothetical protein GI:3184279 from [Arabidopsis thaliana]; contains Pfam profile PF03107: DC1 domain 10 3 5 25 At1g62020 "coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]" 10 3 6 1 At1g62070 expressed protein 10 3 6 2 At1g62260 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 3 6 3 At1g62310 transcription factor jumonji (jmjC) domain-containing protein similar to nuclear protein 5qNCA [Homo sapiens] GI:13161188; contains Pfam profile PF02373: jmjC domain 10 3 6 4 At1g65040 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 3 6 5 At1g65070 DNA mismatch repair MutS family protein contains Pfam profile PF00488: MutS domain V 10 3 6 6 At1g65220 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein low similarity to SP|P47823 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Oryctolagus cuniculus}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 10 3 6 7 At1g65270 expressed protein 10 3 6 8 At1g65410 ABC transporter family protein contains similarity to toluene tolerance protein Ttg2A GI:4336798 from [Pseudomonas putida] 10 3 6 9 At1g65470 chromatin assembly factor-1 (FASCIATA1) (FAS1) identical to FAS1 [Arabidopsis thaliana] GI:4887626 10 3 6 10 At1g65670 cytochrome P450 family protein similar to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana] 10 3 6 11 At1g65730 oligopeptide transporter OPT family protein similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein 10 3 6 12 At1g68470 exostosin family protein contains Pfam profile: PF03016 Exostosin family 10 3 6 13 At1g68530 "very-long-chain fatty acid condensing enzyme (CUT1) identical to very-long-chain fatty acid condensing enzyme (CUT1) GB:AF129511 (required for cuticular wax biosynthesis and pollen fertility: Millar,A.A., et al., Plant Cell (1999))" 10 3 6 14 At1g68660 expressed protein 10 3 6 15 At1g68725 "arabinogalactan-protein, putative (AGP19) non-consensus splice site at the intron:exon boundary (AT:exon)" 10 3 6 16 At1g68880 bZIP transcription factor family protein similar to common plant regulatory factor 6 GI:9650826 from [Petroselinum crispum]; contains Pfam profile: PF00170 bZIP transcription factor 10 3 6 17 At1g68920 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 10 3 6 18 At1g69090 F-box family protein contains F-box domain Pfam:PF00646 10 3 6 19 At1g69180 transcription factor CRC (CRABS CLAW) identical to transcription factor CRC (CRABS CLAW) GI:4836698 [Arabidopsis thaliana] 10 3 6 20 At1g71890 sucrose transporter / sucrose-proton symporter (SUC5) nearly identical to sucrose transporter [Arabidopsis thaliana] GI:12057172 10 3 6 21 At1g71950 expressed protein similar to Pi starvation-induced protein GB:BAA06151 from [Nicotiana tabacum] 10 3 6 22 At1g72110 expressed protein 10 3 6 23 At1g72160 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to GI:807956 from [Saccharomyces cerevisiae]similar to polyphosphoinositide binding protein Ssh2p (GI:2739046) {Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 10 3 6 24 At1g72330 "alanine aminotransferase, putative similar to alanine aminotransferase 2 SP|P34106 from Panicum miliaceum, SP|P52894 from Hordeum vulgare, GI:4730884 from Oryza sativa" 10 3 6 25 At1g72390 expressed protein 10 3 7 1 At1g72560 "tRNA export mediator exportin-t, putative (PAUSED) contains Pfam profile: PF04150 exportin-t, identical to PAUSED gi:30909318" 10 3 7 2 At1g72620 "hydrolase, alpha/beta fold family protein low similarity to BioH [Kurthia sp. 538-KA26] GI:13366133, 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli] GI:1702883; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 3 7 3 AT5G57480 PC-1 C03 10 3 7 4 3XSSC PC-1 C15 10 3 7 5 AT1G29930 PC-1 G03 10 3 7 6 3XSSC PC-1 G15 10 3 7 7 AT3G44150 PC-1 K03 10 3 7 8 3XSSC PC-1 K15 10 3 7 9 AT4G00810 PC-1 O03 10 3 7 10 3XSSC PC-1 O15 10 3 7 11 At1g75390 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 10 3 7 12 At1g75450 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to GB:CAA77151 from [Zea mays] [SP|Q9T0N8] (Plant J. 17 (6), 615-626 (1999))" 10 3 7 13 At1g75670 expressed protein similar to DNA-dependent RNA polymerase 19 kDa polypeptide (EC 2.7.7.6) (A43) (Swiss-Prot:O43036) [Schizosaccharomyces pombe] 10 3 7 14 At1g75720 hypothetical protein 10 3 7 15 At1g75890 family II extracellular lipase 2 (EXL2) EXL2 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 10 3 7 16 At1g75950 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At1) E3 ubiquitin ligase; skp1a; identical to Skp1a GI:3068807, Skp1p GI:1432083 and UIP1 GI:3719209 from [Arabidopsis thaliana]; contains Pfam profiles PF01466: Skp1 family, dimerisation domain and PF03931: Skp1 family, tetramerisation domain;" 10 3 7 17 At1g76120 tRNA pseudouridine synthase family protein similar to SP|Q9Y606 tRNA pseudouridine synthase A (EC 4.2.1.70) (Uracil hydrolyase) {Homo sapiens}; contains Pfam profile PF01416: tRNA pseudouridine synthase 10 3 7 18 At1g76180 dehydrin (ERD14) identical to SP|P42763 Dehydrin ERD14 {Arabidopsis thaliana} 10 3 7 19 At1g78810 expressed protein 10 3 7 20 At1g78850 curculin-like (mannose-binding) lectin family protein low similarity to ser/thr protein kinase from Zea mays [GI:2598067]; contains Pfam lectin (probable mannose binding) domain PF01453 10 3 7 21 At1g78990 "transferase family protein low similarity to acetyl CoA: benzylalcohol acetyltransferase Clarkia breweri GI:3170250, GI:6166336, Clarkia concinna GI:6166326, anthranilate N-hydroxycinnamoyl/benzoyltransferase Dianthus caryophyllus GI:2239091; contains Pfam profile PF02458 transferase family" 10 3 7 22 At1g79040 "photosystem II 10 kDa polypeptide identical to photosystem II 10 kDa polypeptide, chloroplast [precursor] SP:P27202 from [Arabidopsis thaliana]; contains Pfam profile: PF04725 photosystem II 10 kDa polypeptide PsbR" 10 3 7 23 At1g79210 "20S proteasome alpha subunit B, putative nearly identical to SP|O23708 Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) {Arabidopsis thaliana} and to At1g16470" 10 3 7 24 At1g79280 expressed protein weak similarity to Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens] 10 3 7 25 At1g79450 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:4966357; GI:4585976; GI:11994416; GI:9757735 from [Arabidopsis thaliana] 10 3 8 1 At1g79500 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA) identical to Swiss-Prot:Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase (EC 4.1.2.16) (Phospho-2- dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) [Arabidopsis thaliana] 10 3 8 2 At2g02080 "zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type" 10 3 8 3 At2g02150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 8 4 At2g02390 "glutathione S-transferase zeta 1 (GSTZ1) (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1) (Maleylacetone isomerase) (EC 5.2.1.-) (MAI) {Arabidopsis thaliana}; contains Pfam profiles PF02798: Glutathione S-transferase, N-terminal domain and PF00043:Glutathione S-transferase, C-terminal domain" 10 3 8 5 At2g02450 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain 10 3 8 6 At2g02630 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 3 8 7 At2g02700 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 3 8 8 At2g02850 "plastocyanin-like domain-containing protein / plantacyanin, putative similar to plantacyanin GI:3395754 from [Spinacia oleracea]" 10 3 8 9 At2g02930 "glutathione S-transferase, putative " 10 3 8 10 At2g06420 expressed protein 10 3 8 11 At2g06555 expressed protein 10 3 8 12 At2g06925 phospholipase A2 family protein similar to secretory low molecular weight phospholipase A2 beta [Arabidopsis thaliana] GI:25992715; contains INTERPRO domain IPR001211 phospholipase A2 10 3 8 13 At2g07050 "cycloartenol synthase (CAS1) / 2,3-epoxysqualene--cycloartenol cyclase / (S)-2,3-epoxysqualene mutase identical to cycloartenol synthase [SP:P38605 | GI:452446] [PMID:7505443]" 10 3 8 14 At2g07340 "prefoldin-related KE2 family protein contains similarity to Swiss-Prot:O60925 prefoldin subunit 1 [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 10 3 8 15 At2g07520 hypothetical protein 10 3 8 16 At2g07679 "ribosomal protein, putative similar to ribosomal protein S12 [Brassica napus] GI:303518; similar to Swiss-Prot:P92532 mitochondrial ribosomal protein S12 (Arabidopsis thaliana)" 10 3 8 17 At2g07691 hypothetical protein 10 3 8 18 At2g15290 expressed protein 10 3 8 19 At2g15340 glycine-rich protein 10 3 8 20 At2g15500 hypothetical protein 10 3 8 21 At2g15570 "thioredoxin M-type 3, chloroplast (TRX-M3) identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast precursor (TRX-M3) {Arabidopsis thaliana}" 10 3 8 22 At2g15750 hypothetical protein 10 3 8 23 At2g15815 hypothetical protein 10 3 8 24 At2g16050 DC1 domain-containing protein contains Pfam domain PF03107: DC1 domain 10 3 8 25 At2g16120 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 10 3 9 1 At2g18930 hypothetical protein 10 3 9 2 At2g18990 expressed protein 10 3 9 3 At2g19190 "light-responsive receptor protein kinase / senescence-responsive receptor-like serine/threonine kinase, putative (SIRK) similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains Pfam profiles PF00069: Protein kinase domain and PF00560: Leucine Rich Repeat" 10 3 9 4 At2g19260 "ELM2 domain-containing protein / PHD finger family protein contains Pfam profiles: PF01448 ELM2 domain, PF00628 PHD-finger" 10 3 9 5 At2g19450 "diacylglycerol O-acyltransferase / acyl CoA:diacylglycerol acyltransferase (DGAT) identical to gi:5050913, gi:6625553" 10 3 9 6 At2g19510 LOB domain family protein / lateral organ boundaries domain family protein (LBD8) identical to SP|Q9ZUP0| Putative LOB domain protein 8 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana; identical to ASYMMETRIC LEAVES2-like protein 34 [Arabidopsis thaliana] GI:19919039 10 3 9 7 At2g19650 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 3 9 8 At2g19710 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 10 3 9 9 At2g22410 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 9 10 At2g22460 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 10 3 9 11 At2g22650 FAD-dependent oxidoreductase family protein 10 3 9 12 At2g22710 myb family protein 10 3 9 13 At2g22880 VQ motif-containing protein contains PF05678: VQ motif 10 3 9 14 At2g22930 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 3 9 15 At2g23070 "casein kinase II alpha chain, putative similar to casein kinase II, alpha chain (CK II) [Zea mays] SWISS-PROT:P28523; contains protein kinase domain, Pfam:PF00069" 10 3 9 16 At2g23096 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam profile: PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family" 10 3 9 17 At2g25980 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 10 3 9 18 At2g26030 F-box family protein contains F-box domain Pfam:PF00646 10 3 9 19 At2g26200 expressed protein 10 3 9 20 At2g26270 expressed protein ; expression supported by MPSS 10 3 9 21 At2g26450 "pectinesterase family protein contains Pfam profiles: PF01095 pectinesterase,PF04043 plant invertase/pectin methylesterase inhibitor" 10 3 9 22 At2g26500 "cytochrome b6f complex subunit (petM), putative nearly identical to cytochrome b6f complex subunit (GI:3090403) [Arabidopsis thaliana]; alternative splice forms exist" 10 3 9 23 At2g26650 "potassium channel protein 1 (AKT1) identical to AKT1 [Arabidopsis thaliana] gi|563112|gb|AAA96810; member of the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+ channel family, PMID:11500563" 10 3 9 24 At2g26700 protein kinase family protein contains Pfam PF00069: Protein kinase domain 10 3 9 25 At2g29380 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phpsphatase 2C (PP2C) (GI:7768151) [Fagus sylvatica]." 10 3 10 1 At2g29410 "zinc transporter, putative similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; similar to zinc transporter ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 10 3 10 2 At2g29580 "zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein similar to SP|O59800 Cell cycle control protein cwf5 {Schizosaccharomyces pombe}; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 10 3 10 3 At2g29630 thiamine biosynthesis family protein / thiC family protein contains Pfam profile: PF01964 ThiC family 10 3 10 4 At2g29780 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 3 10 5 At2g29840 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 3 10 6 At2g29990 "pyridine nucleotide-disulphide oxidoreductase family protein similar to SP|P32340 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor (EC 1.6.5.3) (Internal NADH dehydrogenase) {Saccharomyces cerevisiae} ; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 10 3 10 7 At2g30050 transducin family protein / WD-40 repeat family protein similar to SEC13-related protein (SP:P55735) [Homo sapiens] 10 3 10 8 At2g32670 "synaptobrevin family protein similar to vesicle-associated membrane protein 7 [Rattus norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like protein 1 {Homo sapiens}; contains Pfam profile PF00957: Synaptobrevin" 10 3 10 9 At2g32710 kip-related protein 4 (KRP4) / cyclin-dependent kinase inhibitor 4 (ICK4) nearly identical to cyclin-dependent kinase inhibitor 4 (krp4) [Arabidopsis thaliana] GI:14422291 10 3 10 10 At2g32850 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 10 11 At2g32905 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 10 3 10 12 At2g33080 "leucine-rich repeat family protein contains leucine rich-repeat domain Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 10 3 10 13 At2g33150 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase" 10 3 10 14 At2g33310 auxin-responsive protein / indoleacetic acid-induced protein 13 (IAA13) identical to SP|Q38831 Auxin-responsive protein IAA13 (Indoleacetic acid-induced protein 13) {Arabidopsis thaliana} 10 3 10 15 At2g33340 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] 10 3 10 16 At2g35920 "helicase domain-containing protein similar to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 10 3 10 17 At2g35980 harpin-induced family protein (YLS9) / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum]; identical to cDNA YLS9 mRNA for hin1 homolog GI:13122295 10 3 10 18 At2g36090 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 3 10 19 At2g36170 "ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A) identical to GI:166930, GI:166931" 10 3 10 20 At2g36330 "integral membrane protein, putative contains 4 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 10 3 10 21 At2g36390 "1,4-alpha-glucan branching enzyme / starch branching enzyme class II (SBE2-1) nearly identical to starch branching enzyme class II [Arabidopsis thaliana] GI:619939" 10 3 10 22 At2g36550 expressed protein 10 3 10 23 At2g36620 60S ribosomal protein L24 (RPL24A) 10 3 10 24 At2g39190 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 10 3 10 25 At2g39240 RNA polymerase I specific transcription initiation factor RRN3 family protein contains Pfam profile PF05327: RNA polymerase I specific transcription initiation factor RRN3 10 3 11 1 At2g39410 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 3 11 2 At2g39450 "cation efflux family protein contains cation efflux family protein domain, Pfam:PF01545" 10 3 11 3 At2g39640 glycosyl hydrolase family 17 protein 10 3 11 4 At2g39700 "expansin, putative (EXP4) similar to alpha-expansin 6 precursor GI:16923359 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 10 3 11 5 At2g39800 delta 1-pyrroline-5-carboxylate synthetase A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH 10 3 11 6 At2g39850 subtilase family protein contains similarity to subtilisin-like protease C1 GI:13325079 from [Glycine max] 10 3 11 7 At2g42320 nucleolar protein gar2-related contains weak similarity to Swiss-Prot:P41891 protein gar2 [Schizosaccharomyces pombe] 10 3 11 8 At2g42380 bZIP transcription factor family protein 10 3 11 9 At2g42530 cold-responsive protein / cold-regulated protein (cor15b) nearly identical to cold-regulated gene cor15b [Arabidopsis thaliana] GI:456016; contains Pfam profile PF02987: Late embryogenesis abundant protein 10 3 11 10 At2g42570 expressed protein 10 3 11 11 At2g42730 F-box family protein contains F-box domain Pfam:PF00646 10 3 11 12 At2g42790 "citrate synthase, glyoxysomal, putative strong similarity to SP|P49299 Citrate synthase, glyoxysomal precursor {Cucurbita maxima}; contains Pfam profile PF00285: Citrate synthase" 10 3 11 13 At2g42950 expressed protein 10 3 11 14 At2g43000 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 10 3 11 15 At2g45670 calcineurin B subunit-related contains Pfam PF00036: EF hand domain and Prosite PS00018: EF-hand calcium-binding domain; contains Pfam profile PF01553: Acyltransferase; weak similarity to Calcineurin B subunit isoform 2 (Protein phosphatase 2B regulatory subunit 2) (Protein phosphatase 3 regulatory subunit B alpha isoform 2) (Swiss-Prot:Q63811) [Mus musculus] 10 3 11 16 At2g45730 "eukaryotic initiation factor 3 gamma subunit family protein contains Pfam profile PF04189: Eukaryotic initiation factor 3, gamma subunit" 10 3 11 17 At2g45890 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 10 3 11 18 At2g45950 "SKP1 family protein similar to glycoprotein FP21 SP:P52285 from [Dictyostelium discoideum]; contains Pfam profile PF01466: Skp1 family, dimerisation domain" 10 3 11 19 At2g46110 ketopantoate hydroxymethyltransferase family protein similar to SP|Q9Y7B6 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) {Emericella nidulans}; contains Pfam profile PF02548: Ketopantoate hydroxymethyltransferase 10 3 11 20 At2g46160 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 10 3 11 21 At2g46300 expressed protein 10 3 11 22 At2g46330 arabinogalactan-protein (AGP16) identical to gi|10880509|gb|AAG24284 10 3 11 23 At3g01690 expressed protein 10 3 11 24 At3g01750 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 10 3 11 25 At3g01880 hypothetical protein 10 3 12 1 At3g01930 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 10 3 12 2 At3g02080 40S ribosomal protein S19 (RPS19A) similar to 40S ribosomal protein S19 GB:P40978 [Oryza sativa] 10 3 12 3 At3g02130 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profile: Eukaryotic protein kinase domain" 10 3 12 4 At3g02260 "auxin transport protein (BIG) nearly identical to auxin transport protein; BIG [Arabidopsis thaliana] GI:21779966; contains Pfam profiles PF02207: Putative zinc finger in N-recognin, PF00569: Zinc finger ZZ type" 10 3 12 5 At3g02300 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 10 3 12 6 At3g04940 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to O-acetylserine(thiol) lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 10 3 12 7 At3g04990 hypothetical protein 10 3 12 8 At3g05155 "sugar transporter, putative similar to sugar-porter family protein 1 [Arabidopsis thaliana] GI:14585699; contains Pfam profile PF00083: major facilitator superfamily protein" 10 3 12 9 At3g05200 "zinc finger (C3HC4-type RING finger) family protein (ATL6) contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 10 3 12 10 At3g05380 myb family transcription factor contains Pfam profile:PF00249 Myb-like DNA-binding domain 10 3 12 11 At3g05440 C2 domain-containing protein similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 10 3 12 12 At3g05570 expressed protein 10 3 12 13 At3g05625 expressed protein 10 3 12 14 At3g08505 "zinc finger (CCCH-type/C3HC4-type RING finger) family protein contains zinc finger C-x8-C-x5-C-x3-H type (and similar) domains, Pfam:PF00642 and zinc finger, C3HC4 type (RING finger) domain, Pfam:PF00097" 10 3 12 15 At3g08570 "phototropic-responsive protein, putative similar to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 10 3 12 16 At3g08730 serine/threonine protein kinase (PK1) (PK6) identical to serine/threonine-protein kinase AtPK1/AtPK6 (ribosomal-protein S6 kinase ATPK6) [Arabidopsis thaliana] SWISS-PROT:P42818 10 3 12 17 At3g08790 "VHS domain-containing protein / GAT domain-containing protein weak similarity to HGF-regulated tyrosine kinase substrate [Mus musculus] GI:1089781; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 10 3 12 18 At3g08940 chlorophyll A-B binding protein (LHCB4.2) contains Pfam profile: PF00504 chlorophyll A-B binding protein; identical to Lhcb4.2 protein GB:AAD28774 [Arabidopsis thaliana] 10 3 12 19 At3g08970 DNAJ heat shock N-terminal domain-containing protein low similarity to PIR|A47079|A47079 heat shock protein dnaJ - Lactococcus lactis; contains Pfam profile PF00226 DnaJ domain 10 3 12 20 At3g09100 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF00782: Dual specificity phosphatase catalytic domain" 10 3 12 21 At3g09150 "phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) identical to SP|Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor (EC 1.3.7.4) (Phytochromobilin synthase) (PFB synthase) (PPhiB synthase) {Arabidopsis thaliana}; identical to cDNA for phytochromobilin synthase HY2 protein, GI:13359272" 10 3 12 22 At3g11650 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein / NDR1/HIN1-like protein 2 identical to NDR1/HIN1-Like protein 2 (GP:9502174) [Arabidopsis thaliana]; similar to hin1 GB:CAA68848 [Nicotiana tabacum] 10 3 12 23 At3g11700 beta-Ig-H3 domain-containing protein / fasciclin domain-containing protein contains Pfam profile PF02469: Fasciclin domain 10 3 12 24 At3g11850 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 10 3 12 25 At3g11890 expressed protein 10 3 13 1 At3g12020 kinesin motor protein-related similar to putative kinesin heavy chain GB:AAD23684 GI:4567271 from [Arabidopsis thaliana] 10 3 13 2 At3g12060 expressed protein similar to hypothetical protein GB:CAB82953 GI:7340710 from [Arabidopsis thaliana] 10 3 13 3 At3g12210 expressed protein 10 3 13 4 At3g12250 bZIP family transcription factor contains Pfam profile:PF00170 bZIP transcription factor 10 3 13 5 At3g14690 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 10 3 13 6 At3g14740 PHD finger family protein similar to zinc-finger protein BR140 [PIR|JC2069][Homo sapiens]; contains PHD-finger domain PF00628 10 3 13 7 At3g14870 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 10 3 13 8 At3g14910 expressed protein 10 3 13 9 At3g15050 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 10 3 13 10 At3g15110 expressed protein 10 3 13 11 At3g15270 squamosa promoter-binding protein-like 5 (SPL5) identical to squamosa promoter binding protein-like 5 [Arabidopsis thaliana] GI:5931629; contains Pfam profile PF03110: SBP domain 10 3 13 12 At3g15330 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 10 3 13 13 At3g17910 surfeit 1 (SURF1) identical to Surfeit 1 GB:AAF19609 from [Arabidopsis thaliana] 10 3 13 14 At3g17980 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 10 3 13 15 At3g18160 "peroxin-3 family protein contains Pfam domain, PF04882: Peroxin-3" 10 3 13 16 At3g18190 "chaperonin, putative similar to SWISS-PROT:P50991- T-complex protein 1, delta subunit (TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 10 3 13 17 At3g18350 expressed protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 10 3 13 18 At3g18390 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 10 3 13 19 At3g18550 "TCP family transcription factor, putative similar to teosinte branched1 protein GI:13649866 [Danthoniopsis dinteri]" 10 3 13 20 At3g18610 "nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif" 10 3 13 21 At3g21290 dentin sialophosphoprotein-related contains weak similarity to Dentin sialophosphoprotein precursor (Swiss-Prot:Q9NZW4) [Homo sapiens] 10 3 13 22 At3g21350 "RNA polymerase transcriptional regulation mediator-related contains weak similarity to RNA polymerase transcriptional regulation mediator, subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (NY-REN-28 antigen) (Swiss-Prot:O75586) [Homo sapiens]" 10 3 13 23 At3g21530 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 10 3 13 24 At3g21580 expressed protein 10 3 13 25 At3g21710 expressed protein 10 3 14 1 At3g21740 expressed protein contains Pfam PF05634: Arabidopsis thaliana protein of unknown function (DUF794) 10 3 14 2 At3g21910 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] 10 3 14 3 At3g21970 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] 10 3 14 4 At3g24680 "zinc finger protein, putative identical to zinc-finger protein GI:976277 from [Arabidopsis thaliana]" 10 3 14 5 At3g24730 mitosis DIM1 family protein contains Pfam domain PF02966: Mitosis protein DIM1 10 3 14 6 At3g24954 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 10 3 14 7 At3g25050 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endoxyloglucan transferase EXGT-A4 GI:5533315 from [Arabidopsis thaliana]" 10 3 14 8 At3g25200 hypothetical protein 10 3 14 9 At3g25260 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 3 14 10 At3g25545 expressed protein 10 3 14 11 At3g25585 "aminoalcoholphosphotransferase, putative strong similarity to aminoalcoholphosphotransferase [Arabidopsis thaliana] GI:3661593; contains Pfam profile PF01066: CDP-alcohol phosphatidyltransferase" 10 3 14 12 At3g28200 "peroxidase, putative similar to peroxidase ATP26a GB:CAA72487 GI:1890317 [Arabidopsis thaliana]" 10 3 14 13 At3g28260 hypothetical protein 10 3 14 14 At3g28450 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GB:AAD02501 from [Arabidopsis thaliana]" 10 3 14 15 At3g28500 60S acidic ribosomal protein P2 (RPP2C) similar to acidic ribosomal protein P2b (rpp2b) GB:U62753 GI:2431770 from [Zea mays] 10 3 14 16 At3g28680 prolylcarboxypeptidase-related weak similarity to SP|P42785| Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) {Homo sapiens} 10 3 14 17 At3g28730 structure-specific recognition protein 1 / high mobility group protein / HMG protein nearly identical to SP|Q05153 Structure-specific recognition protein 1 homolog (HMG protein) {Arabidopsis thaliana}; contains Pfam profile PF00505: HMG (high mobility group) box; contains Pfam profile PF03531: Structure-specific recognition protein 10 3 14 18 At3g28910 "myb family transcription factor (MYB30) identical to myb-like protein GB:AJ007289 [Arabidopsis thaliana] (Plant J. 20 (1), 57-66 (1999))" 10 3 14 19 At3g28950 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to SP|P54121 AIG2 protein {Arabidopsis thaliana} 10 3 14 20 At3g42740 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 10 3 14 21 At3g42790 "PHD finger family protein contains PHD-finger domain, INTERPRO:IPR001965" 10 3 14 22 At3g43110 expressed protein 10 3 14 23 At3g43170 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 10 3 14 24 At3g43380 hypothetical protein 10 3 14 25 At3g43440 expressed protein 10 3 15 1 At3g43600 "aldehyde oxidase, putative identical to gi: 3172025; identical to cDNA putative aldehyde oxidase (AO3) mRNA, partial cds GI:2792303" 10 3 15 2 At3g43682 hypothetical protein 10 3 15 3 At3g46630 expressed protein contains similarity to defective chloroplasts and leaves protein SP:Q42463 from [Lycopersicon esculentum] 10 3 15 4 At3g46690 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 3 15 5 At3g46870 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 15 6 At3g46930 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 15 7 At3g47110 "leucine-rich repeat transmembrane protein kinase, putative protein kinase Xa21 receptor type precursor, Oryza sativa, PIR:A57676" 10 3 15 8 At3g47170 transferase family protein low similarity to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata GI:6746554; contains Pfam profile PF02458 transferase family 10 3 15 9 At3g47340 asparagine synthetase 1 [glutamine-hydrolyzing] / glutamine-dependent asparagine synthetase 1 (ASN1) identical to SP|P49078 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine- dependent asparagine synthetase) {Arabidopsis thaliana} 10 3 15 10 At3g47370 "40S ribosomal protein S20 (RPS20B) 40S RIBOSOMAL PROTEIN S20 - ARABIDOPSIS THALIANA,PID:g1350956" 10 3 15 11 At3g50180 hypothetical protein 10 3 15 12 At3g50220 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 10 3 15 13 At3g50390 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to myosin heavy chain kinase B (gb:U90946) [Dictyostelium discoideum] 10 3 15 14 At3g50450 hypersensitive response protein 1 (HR1) identical to HR1 [Arabidopsis thaliana] GI:12958166; contains Pfam profile PF05659: Arabidopsis broad-spectrum mildew resistance protein RPW8 10 3 15 15 At3g50630 kip-related protein 2 (KRP2) / cyclin-dependent kinase inhibitor 2 (ICK2) / cdc2a-interacting protein identical to Cdc2a-interacting protein (ICK2) (cyclin-dependent kinase inhibitor) [Arabidopsis thaliana] GI:7160669 10 3 15 16 At3g50685 expressed protein 10 3 15 17 At3g50860 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 10 3 15 18 At3g50920 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 10 3 15 19 At3g53480 "ABC transporter family protein PDR5-like ABC transporter, Spirodela polyrrhiza, EMBL:Z70524" 10 3 15 20 At3g53520 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 10 3 15 21 At3g53690 "zinc finger (C3HC4-type RING finger) family protein contains a Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518 and a IBR domain, Pfam:PF01485" 10 3 15 22 At3g53740 "60S ribosomal protein L36 (RPL36B) 60S RIBOSOMAL PROTEIN L36 - Schizosaccharomyces pombe, swissprot:Q92365" 10 3 15 23 At3g53890 "40S ribosomal protein S21 (RPS21B) ribosomal protein S21, cytosolic - Oryza sativa, PIR:S38357" 10 3 15 24 At3g53930 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 3 15 25 At3g54050 "fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative strong similarity to fructose-1,6-bisphosphatase [Brassica napus] GI:289367; identical to SP|P25851 Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) {Arabidopsis thaliana}; contains Pfam profile PF00316: fructose-1,6-bisphosphatase" 10 3 16 1 At3g54110 plant uncoupling mitochondrial protein (PUMP) identical to plant uncoupling mitochondrial protein [Arabidopsis thaliana] GI:3115108 10 3 16 2 At3g56880 VQ motif-containing protein contains PF05678: VQ motif 10 3 16 3 At3g56940 "dicarboxylate diiron protein, putative (Crd1) similar to leucine-containing zipper protein At103 GP:6911864; contains Pfam profile PF05447: Copper response defect 1 (CRD1)" 10 3 16 4 At3g57120 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 10 3 16 5 At3g57180 expressed protein 10 3 16 6 At3g57340 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 10 3 16 7 At3g57390 "MADS-box protein (AGL18) agamous-like protein 15 - Arabidopsis thaliana, PIR:S71200" 10 3 16 8 At3g57550 guanylate kinase 2 (GK-2) identical to guanylate kinase (GK-2) [Arabidopsis thaliana] gi|7861798|gb|AAF70409 10 3 16 9 At3g57610 "adenylosuccinate synthetase (ADSS) identical to adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS) (AMPSase) (Swiss-Prot:Q96529) [Arabidopsis thaliana]" 10 3 16 10 At3g60370 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein SP:Q9M222; similar to FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 10 3 16 11 At3g60420 expressed protein 10 3 16 12 At3g60580 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 3 16 13 At3g60640 "autophagy 8g (APG8g) identical to autophagy 8g [Arabidopsis thaliana] GI:19912163; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3; supporting cDNA gi|19912162|dbj|AB073181.1|" 10 3 16 14 At3g60810 expressed protein 10 3 16 15 At3g60860 "guanine nucleotide exchange family protein similar to guanine nucleotide exchange factor, Homo sapiens, GI:5456754; contains Pfam profile PF01369: Sec7 domain" 10 3 16 16 At3g61050 "calcium-dependent lipid-binding protein, putative strong similarity to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain" 10 3 16 17 At3g61100 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 10 3 16 18 At4g00231 ataxin-related contains weak similarity to Ataxin-10 (Spinocerebellar ataxia type 10 protein) (Brain protein E46 homolog) (Swiss-Prot:Q9UBB4) [Homo sapiens] 10 3 16 19 At4g00260 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 10 3 16 20 At4g00360 "cytochrome P450, putative " 10 3 16 21 At4g00420 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 10 3 16 22 At4g00540 myb family transcription factor 10 3 16 23 At4g00570 "malate oxidoreductase, putative similar to NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum tuberosum}" 10 3 16 24 At4g00710 protein kinase family protein low similarity to protein kinase [Arabidopsis thaliana] GI:2852449; contains Pfam profile: PF00069 Protein kinase domain 10 3 16 25 At4g00755 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 3 17 1 At4g03230 "S-locus lectin protein kinase family protein contains Pfam domins, PF00069: Protein kinase domain, PF00954: S-locus glycoprotein family and PF01453: Lectin (probable mannose binding)" 10 3 17 2 At4g03280 "cytochrome B6-F complex iron-sulfur subunit, chloroplast / Rieske iron-sulfur protein / plastoquinol-plastocyanin reductase (petC) identical to gi:9843639; identical to cDNA rieske iron-sulfur protein precursor (petC) GI:5725449" 10 3 17 3 At4g03415 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 10 3 17 4 At4g03470 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 10 3 17 5 At4g03630 "root nodule development protein-related similar to N7 protein [Medicago truncatula] gi|3273101|emb|CAA76808; contains similarity to SKP1 interacting partner 1 GI:10716947 from [Arabidopsis thaliana], PMID:11387208" 10 3 17 6 At4g03740 hypothetical protein 10 3 17 7 At4g04030 ovate family protein 65% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 10 3 17 8 At4g04130 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At2g11345, At3g42690" 10 3 17 9 At4g08850 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 10 3 17 10 At4g08878 "inorganic phosphate transporter, putative similar to inorganic phosphate transporter (GI:3869190) [Arabidopsis thaliana]" 10 3 17 11 At4g09070 "hypothetical protein hypothetical protein T3B23.10 - Arabidopsis thaliana,PID:g4803958" 10 3 17 12 At4g09130 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 10 3 17 13 At4g09350 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q45552 Chaperone protein dnaJ {Bacillus stearothermophilus}; contains Pfam profile PF00226: DnaJ domain 10 3 17 14 At4g09430 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 10 3 17 15 At4g09590 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 protein (GI:1619321) Nicotiana tabacum 10 3 17 16 At4g09650 "ATP synthase delta chain, chloroplast, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative similar to SP|P32980 ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) {Nicotiana tabacum}; contains Pfam profile PF00213: ATP synthase F1, delta subunit" 10 3 17 17 At4g12410 "auxin-responsive family protein similar to GP:546362 small auxin up RNA {Arabidopsis thaliana}; auxin-induced protein 10A -Glycine max,PID:g255579" 10 3 17 18 At4g12450 expressed protein 10 3 17 19 At4g12620 "replication control protein, putative similar to origin recognition complex subunit 1 (Replication control protein 1)[Homo sapiens] SWISS-PROT:Q13415" 10 3 17 20 At4g12700 expressed protein 10 3 17 21 At4g12850 far-red impaired responsive family protein / FAR1 family protein weak similarity to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF03101: FAR1 family 10 3 17 22 At4g12910 "serine carboxypeptidase S10 family protein SERINE CARBOXYPEPTIDASE I PRECURSOR - Hordeum vulgare, SWall:CBP1_HORVU" 10 3 17 23 At4g13090 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endoxyloglucan transferase EXGT-A1 GI:5533309 from [Arabidopsis thaliana]" 10 3 17 24 At4g13140 expressed protein 10 3 17 25 At4g15500 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 10 3 18 1 At4g15540 nodulin-related low similarity to MtN21 [Medicago truncatula] GI:2598575 10 3 18 2 At4g15720 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 3 18 3 At4g15760 "monooxygenase, putative (MO1) similar to GI:3426062" 10 3 18 4 At4g15920 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 10 3 18 5 At4g15970 "expressed protein similar to GI:2827651, GI:7527728, GI:4406788, GI:6063544, GI:10764853 from [Arabidopsis thaliana]" 10 3 18 6 At4g16130 "GHMP kinase family protein contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288" 10 3 18 7 At4g16150 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from [Nicotiana tabacum] 10 3 18 8 At4g18620 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 10 3 18 9 At4g18680 hypothetical protein weak similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423 10 3 18 10 At4g18840 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 18 11 At4g18900 transducin family protein / WD-40 repeat family protein contains 5 (4 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] 10 3 18 12 At4g19020 chromomethylase 2 (CMT2) nearly identical to chromomethylase CMT2 [Arabidopsis thaliana] GI:14583094 10 3 18 13 At4g19080 "hypothetical protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 10 3 18 14 At4g19210 "RNase L inhibitor protein, putative similar to 68 kDa protein HP68 GI:16755057 from [Triticum aestivum]" 10 3 18 15 At4g19250 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 10 3 18 16 At4g22130 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 18 17 At4g22165 F-box family protein contains F-box domain Pfam:PF00646 10 3 18 18 At4g22280 F-box family protein contains Pfam profile PF00646: F-box domain 10 3 18 19 At4g22320 expressed protein 10 3 18 20 At4g22490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 3 18 21 At4g22550 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 10 3 18 22 At4g22720 glycoprotease M22 family protein similar to sialylglycoprotease [Haemophilus ducreyi] GI:6942294; contains Pfam profile PF00814: Glycoprotease family 10 3 18 23 At4g22756 sterol desaturase family protein similar to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; contains Pfam profile PF01598: Sterol desaturase 10 3 18 24 At4g25330 expressed protein 10 3 18 25 At4g25390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 19 1 At4g25520 transcriptional co-regulator family protein contains similarity to GP|18033922|gb|AAL57277 SEUSS transcriptional co-regulator [Arabidopsis thaliana] 10 3 19 2 At4g25580 stress-responsive protein-related contains weak similarity to Low-temperature-induced 65 kDa protein (Desiccation-responsive protein 29B) (Swiss-Prot:Q04980) [Arabidopsis thaliana] 10 3 19 3 At4g25740 "40S ribosomal protein S10 (RPS10A) 40S ribosomal protein S10 - Lumbricus rubellus, PID:e1329701" 10 3 19 4 At4g25800 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 10 3 19 5 At4g25970 "phosphatidylserine decarboxylase, putative similar to SP|P53037 Phosphatidylserine decarboxylase proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces cerevisiae}; contains Pfam profile PF02666: phosphatidylserine decarboxylase" 10 3 19 6 At4g26010 "peroxidase, putative peroxidase ATP13a - Arabidopsis thaliana, PID:e264765; identical to cDNA class III peroxidase ATP35, GI:17530565" 10 3 19 7 At4g28520 "12S seed storage protein, putative / cruciferin, putative strong similarity to SP|P33525 Cruciferin CRU1 precursor (11S globulin) (12S storage protein) from Brassica napus; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305 isoform contains non-consensus AC acceptor splice site at intron 3" 10 3 19 8 At4g28570 "alcohol oxidase-related low similarity to long chain fatty alcohol oxidase from Candida cloacae [GI:6983581], Candida tropicalis [GI:6983594]" 10 3 19 9 At4g28715 "myosin heavy chain, putative similar to myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066" 10 3 19 10 At4g28770 expressed protein 10 3 19 11 At4g28960 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 10 3 19 12 At4g29010 "abnormal inflorescence meristem 1 / fatty acid multifunctional protein (AIM1) identical to gi:4337025; contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase)" 10 3 19 13 At4g29170 Mnd1 family protein contains Pfam PF03962: Mnd1 family 10 3 19 14 At4g29210 gamma-glutamyltranspeptidase family protein similar to SP|P07314 Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 10 3 19 15 At4g31780 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative similar to MGD synthase type A from Arabidopsis thaliana [gi:9927297], similar to monogalactosyldiacylglycerol synthase, Cucumis sativus, PID:g1805254" 10 3 19 16 At4g31810 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 10 3 19 17 At4g31970 "cytochrome P450 family protein similar to cytochrome P450 82C1 (CYP82C1p)(GI:2739004) [Glycine max]; flavonoid 3 ,5'-hydroxylase, Campanula medium, PATCHX:D1003951" 10 3 19 18 At4g32010 "transcriptional factor B3 family protein low similarity to FUSCA3 [Arabidopsis thaliana] GI:3582518, VIVIPAROUS1 protein [Triticum aestivum] GI:7801376; contains Pfam profile PF02362: B3 DNA binding domain" 10 3 19 19 At4g32160 phox (PX) domain-containing protein contains Pfam profile PF00787: PX domain 10 3 19 20 At4g32230 hypothetical protein 10 3 19 21 At4g32390 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 10 3 19 22 At4g32440 agenet domain-containing protein contains Pfam PF05641: Agenet domain 10 3 19 23 AT5G57480 PC-1 C03 10 3 19 24 3XSSC PC-1 C15 10 3 19 25 AT1G29930 PC-1 G03 10 3 20 1 3XSSC PC-1 G15 10 3 20 2 AT3G44150 PC-1 K03 10 3 20 3 3XSSC PC-1 K15 10 3 20 4 AT4G00810 PC-1 O03 10 3 20 5 3XSSC PC-1 O15 10 3 20 6 At4g35000 "L-ascorbate peroxidase 3 (APX3) identical to ascorbate peroxidase 3 [Arabidopsis thaliana] GI:2444019, L-ascorbate peroxidase [Arabidopsis thaliana] gi|1523791|emb|CAA66926; similar to ascorbate peroxidase [Gossypium hirsutum] gi|1019946|gb|AAB52954" 10 3 20 7 At4g35060 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403 10 3 20 8 At4g35200 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 10 3 20 9 At4g35260 isocitrate dehydrogenase subunit 1 / NAD+ isocitrate dehydrogenase subunit 1 nearly identical to NAD+ dependent isocitrate dehydrogenase subunit 1 [Arabidopsis thaliana] GI:1766046 10 3 20 10 At4g35400 hypothetical protein 10 3 20 11 At4g35440 voltage-gated chloride channel family protein contains Pfam profile PF00654: Voltage gated chloride channel 10 3 20 12 At4g35600 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 3 20 13 At4g35660 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function; expression supported by MPSS 10 3 20 14 At4g38270 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 10 3 20 15 At4g38330 expressed protein 10 3 20 16 At4g38510 "vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative very strong similarity to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain" 10 3 20 17 At4g38570 "CDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative / phosphatidylinositol synthase, putative similar to phosphatidylinositol synthase (PIS1) - Arabidopsis thaliana, PID:e1313354 [gi:3367632]" 10 3 20 18 At4g38750 expressed protein 10 3 20 19 At4g38810 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 10 3 20 20 At4g38940 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 3 20 21 At4g38980 expressed protein 10 3 20 22 At5g02430 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); rab11 binding protein, Bos taurus, EMBL:AF117897" 10 3 20 23 At5g02470 "DP-2 transcription factor, putative (DPA) similar to Swiss-Prot:Q14188 transcription factor DP-2 (E2F dimerization partner 2) [Homo sapiens]" 10 3 20 24 At5g02600 "heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana" 10 3 20 25 At5g02660 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 10 3 21 1 At5g02820 DNA topoisomerase VIA (SPO11) identical to topoisomerase 6 subunit A (spo11) [Arabidopsis thaliana] GI:12331186 10 3 21 2 At5g02860 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 3 21 3 At5g03040 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 10 3 21 4 At5g03100 F-box family protein contains F-box domain Pfam:PF00646 10 3 21 5 At5g05760 syntaxin 31 (SYP31) / SED5 identical to SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis thaliana} 10 3 21 6 At5g05820 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, glucose-6-phosphate/phosphate-translocator precursor [Zea mays] GI:2997589; contains Pfam profile PF00892: Integral membrane protein" 10 3 21 7 At5g05970 "transducin family protein / WD-40 repeat family protein contains similarity to regulatory protein Nedd1; contains Pfam PF00400: WD domain, G-beta repeat (6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466" 10 3 21 8 At5g06020 self-incompatibility protein-related similar to self-incompatibility [Papaver rhoeas] GI:3097260 10 3 21 9 At5g06170 "sucrose transporter, putative / sucrose-proton symporter, putative similar to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094, sucrose transporter [Arabidopsis thaliana] GI:12057172; contains Pfam profile PF00083: major facilitator superfamily protein" 10 3 21 10 At5g06210 "RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tabacum] GI:15822703, [Nicotiana sylvestris] GI:624925, [Solanum tuberosum] GI:15822705; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 10 3 21 11 At5g06360 ribosomal protein S8e family protein contains Pfam profile PF01201: Ribosomal protein S8e 10 3 21 12 At5g06420 "zinc finger (CCCH-type/C3HC4-type RING finger) family protein contains Pfam domains PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and PF00097: Zinc finger, C3HC4 type (RING finger)" 10 3 21 13 At5g09500 "40S ribosomal protein S15 (RPS15C) ribosomal protein S15 - Arabidopsis thaliana, EMBL:Z23161" 10 3 21 14 At5g09560 "KH domain-containing protein various predicted RNA binding proteins, Arabidopsis thaliana" 10 3 21 15 At5g09730 "glycosyl hydrolase family 3 protein beta-xylosidase, Hypocrea jecorina, EMBL:Z69257" 10 3 21 16 At5g09790 "PHD finger family protein / SET domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF00856: SET domain" 10 3 21 17 At5g09950 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 3 21 18 At5g09995 expressed protein 10 3 21 19 At5g10140 MADS-box protein flowering locus F (FLF) identical to FLOWERING LOCUS C protein (MADS box protein FLOWERING LOCUS F) (Swiss-Prot:Q9S7Q7) [Arabidopsis thaliana] 10 3 21 20 At5g10200 expressed protein ; expression supported by MPSS 10 3 21 21 At5g13320 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 10 3 21 22 At5g13380 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 10 3 21 23 At5g13540 "expressed protein HERC2 - Homo sapiens, EMBL:AF071172; isoform contains non-consensus GG acceptor splice site at intron 6" 10 3 21 24 At5g13580 ABC transporter family protein 10 3 21 25 At5g13750 transporter-related 10 3 22 1 At5g13800 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Terrabacter sp. DBF63] GI:14196240; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 3 22 2 At5g13970 expressed protein 10 3 22 3 At5g14020 expressed protein 10 3 22 4 At5g16770 myb family transcription factor (MYB9) contains Pfam profile: PF00249 Myb-like DNA-binding domain 10 3 22 5 At5g16800 "GCN5-related N-acetyltransferase (GNAT) family protein very low similarity to SP|P39909 Spermine/spermidine acetyltransferase (EC 2.3.1.57) {Bacillus subtilis}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 10 3 22 6 At5g16970 "NADP-dependent oxidoreductase, putative (P1) identical to probable NADP-dependent oxidoreductase P1, zeta-crystallin homolog [SP|Q39172][gi:886428], Arabidopsis thaliana; similar to allyl alcohol dehydrogenase [Nicotiana tabacum] GI:6692816; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 10 3 22 7 At5g17020 exportin1 (XPO1) nearly identical to Exportin1 (XPO1) protein [Arabidopsis thaliana] GI:7671510 10 3 22 8 At5g17200 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 10 3 22 9 At5g17240 SET domain-containing protein contains Pfam profile PF00856: SET domain 10 3 22 10 At5g17410 "tubulin family protein similar to spindle pole body protein [Homo sapiens][GI:2801701][PMID:9566967], gamma-tubulin ring protein Dgrip84 [Drosophila melanogaster][GI:4689225][PMID: 10037793]" 10 3 22 11 At5g17450 "heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403" 10 3 22 12 At5g20030 agenet domain-containing protein contains Pfam PF05641: Agenet domain 10 3 22 13 At5g20070 MutT/nudix family protein low similarity to SP|Q19427 NADH pyrophosphatase (EC 3.6.1.-) {Caenorhabditis elegans}; contains Pfam profile PF00293: NUDIX domain 10 3 22 14 At5g20220 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 10 3 22 15 At5g20280 "sucrose-phosphate synthase, putative similar to sucrose-phosphate synthase (EC 2.4.1.14) isoform 1 - Citrus unshiu, EMBL:AB005023" 10 3 22 16 At5g20460 hypothetical protein 10 3 22 17 At5g20520 expressed protein 10 3 22 18 At5g20680 "expressed protein predicted proteins, Arabidopsis thaliana" 10 3 22 19 At5g20720 "20 kDa chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20) identical to chloroplast 20 kDa chaperonin, chloroplast precursor (Protein Cpn21), chloroplast protein Cpn10, chloroplast chaperonin 10 (Ch-CPN10), SP|O65282 from [Arabidopsis thaliana]; identical to cDNA chaperonin 20 GI:14587372" 10 3 22 20 At5g24040 F-box family protein similar to unknown protein (gb|AAD22308.1) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 3 22 21 At5g24100 "leucine-rich repeat transmembrane protein kinase, putative " 10 3 22 22 At5g24250 hypothetical protein 10 3 22 23 At5g24300 "starch synthase, putative similar to starch synthase I-1 GI:9369334 from [Triticum aestivum]" 10 3 22 24 At5g24410 glucosamine/galactosamine-6-phosphate isomerase-related contains weak similarity to Swiss-Prot:O95336 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) [Homo sapiens] 10 3 22 25 At5g24470 pseudo-response regulator 5 (APRR5) identical to pseudo-response regulator 5 GI:10281006 from [Arabidopsis thaliana] 10 3 23 1 At5g24630 expressed protein ; expression supported by MPSS 10 3 23 2 At5g24680 expressed protein similar to unknown protein (pir||T38384) 10 3 23 3 At5g27620 "cyclin family protein similar to SP|P51946 Cyclin H (MO15-associated protein) {Homo sapiens}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 10 3 23 4 At5g27680 "DEAD/DEAH box helicase, putative similar to WRN (Werner syndrome) protein - Mus musculus, EMBL:AF241636; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF00627: UBA/TS-N domain" 10 3 23 5 At5g27840 serine/threonine protein phosphatase PP1 isozyme 8 (TOPP8) identical to SP|O82734 Serine/threonine protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) {Arabidopsis thaliana} 10 3 23 6 At5g27910 "CCAAT-box binding transcription factor Hap5a, putative " 10 3 23 7 At5g28070 hypothetical protein 10 3 23 8 At5g28140 hypothetical protein 10 3 23 9 At5g28320 expressed protein This is likely a pseudogene. 10 3 23 10 At5g28390 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 3 23 11 At5g36650 hypothetical protein 10 3 23 12 At5g36720 hypothetical protein similar to unknown protein (gb|AAF16529.1) 10 3 23 13 At5g36920 "expressed protein predicted protein, Arabidopsis thaliana; expression supported by MPSS" 10 3 23 14 At5g36970 "harpin-induced protein-related / HIN1-related / harpin-responsive protein-related weak similarity to harpin inducing protein (hin1), Nicotiana tabacum, EMBL:AF212183, GI:1619321" 10 3 23 15 At5g37150 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 10 3 23 16 At5g37200 "zinc finger (C3HC4-type RING finger) family protein low similarity to ring-H2 finger protein RHY1a from Arabidopsis thaliana [gi:3790593], ring finger-H2 protein from Xenopus laevis [gi:13752371]; contains Pfam domain zinc finger, C3HC4 type (RING finger) PF00097" 10 3 23 17 At5g37380 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 10 3 23 18 At5g37415 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL105 10 3 23 19 At5g40300 "integral membrane protein, putative MtN24 gene, Medicago truncatula, EMBL:MTY15290; contains Pfam PF04535 : Domain of unknown function (DUF588); contains 4 transmembrane domains; similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 10 3 23 20 At5g40360 myb family transcription factor (MYB115) contains Pfam profile: PF00249 myb-like DNA-binding domain 10 3 23 21 At5g40530 expressed protein contains Pfam profile PF05148: Protein of unknown function (DUF691) 10 3 23 22 At5g40580 "20S proteasome beta subunit B (PBB2) (PRCFC) identical to 20S proteasome beta subunit PBB2 [Arabidopsis thaliana] GI:3421104, cDNA proteasome subunit prcfc GI:2511575" 10 3 23 23 At5g40720 expressed protein contains Pfam profile PF01697: Domain of unknown function 10 3 23 24 At5g40780 "lysine and histidine specific transporter, putative strong similarity to lysine and histidine specific transporter GI:2576361 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 10 3 23 25 At5g40950 "50S ribosomal protein L27, chloroplast, putative (RPL27) identical to SP|Q9FLN4 ribosomal protein L27, chloroplast precursor {Arabidopsis thaliana}; similar to SP|P30155 50S ribosomal protein L27, chloroplast precursor (CL27) {Nicotiana tabacum}" 10 3 24 1 At5g41010 "DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative similar to SP|P53803 DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide (EC 2.7.7.6) (ABC10-alpha) (RPB7.0) (RPB10alpha) {Homo sapiens}; contains Pfam profile PF03604: DNA directed RNA polymerase, 7 kDa subunit" 10 3 24 2 At5g43690 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 10 3 24 3 At5g43750 expressed protein 10 3 24 4 At5g43920 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to will die slowly protein (WDS) (SP:Q9V3J8) [Drosophila melanogaster] 10 3 24 5 At5g43960 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 10 3 24 6 At5g44120 12S seed storage protein (CRA1) nearly identical to SP|P15455 [Plant Mol Biol 11:805-820 (1988)]; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305 10 3 24 7 At5g44170 expressed protein low similarity to SP|P40389 Rapid response to glucose protein 1 {Schizosaccharomyces pombe} 10 3 24 8 At5g44316 "ATP-binding-cassette transporter, putative similar to ATP-binding-cassette transporter (ABC1) described in PMID:11156608" 10 3 24 9 At5g44360 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 10 3 24 10 At5g46900 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 3 24 11 At5g46950 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 10 3 24 12 At5g47110 "lil3 protein, putative similar to Lil3 protein [Arabidopsis thaliana] gi|4741966|gb|AAD28780" 10 3 24 13 At5g47170 hypothetical protein similar to unknown protein (gb AAF26469.1) 10 3 24 14 At5g47330 palmitoyl protein thioesterase family protein 10 3 24 15 At5g47390 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 10 3 24 16 At5g47490 expressed protein 10 3 24 17 At5g47550 "cysteine protease inhibitor, putative / cystatin, putative similar to SP|P09229 Cysteine proteinase inhibitor-I (Oryzacystatin-I) {Oryza sativa}; contains Pfam profile PF00031: Cystatin domain" 10 3 24 18 At5g50200 expressed protein similar to unknown protein (pir||T05562) isoform contains a non-consensus AT acceptor splice site at intron 1 10 3 24 19 At5g50240 "protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative similar to SP|Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)" 10 3 24 20 At5g50400 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 10 3 24 21 At5g50460 "protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans]" 10 3 24 22 At5g50645 hypothetical protein 10 3 24 23 At5g50720 ABA-responsive protein (HVA22e) identical to AtHVA22e [Arabidopsis thaliana] GI:11225589 10 3 24 24 At5g50880 hypothetical protein 10 3 24 25 At5g50920 "ATP-dependent Clp protease ATP-binding subunit / ClpC almost identical to ClpC GI:2921158 from [Arabidopsis thaliana]; contains Pfam profile PF02861: Clp amino terminal domain; contains Pfam profile PF00004: ATPase, AAA family; contains Pfam profile PF02151: UvrB/uvrC motif" 10 3 25 1 At5g53680 RNA recognition motif (RRM)-containing protein low similarity to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 3 25 2 At5g53740 hypothetical protein 10 3 25 3 At5g53890 "leucine-rich repeat transmembrane protein kinase, putative " 10 3 25 4 At5g53930 expressed protein 10 3 25 5 At5g54080 "homogentisate 1,2-dioxygenase / homogentisicase/homogentisate oxygenase / homogentisic acid oxidase (HGO) identical to SP|Q9ZRA2 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) {Arabidopsis thaliana}; contains Pfam profile PF04209: homogentisate 1,2-dioxygenase" 10 3 25 6 At5g54130 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 10 3 25 7 At5g54300 expressed protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 10 3 25 8 At5g54360 "zinc finger (C2H2 type) family protein-related contains Prosite:PS00028: Zinc finger, C2H2 type, domain." 10 3 25 9 At5g57060 expressed protein 10 3 25 10 At5g57110 "calcium-transporting ATPase 8, plasma membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical to calcium-transporting ATPase 8, plasma membrane-type SP:Q9LF79 from [Arabidopsis thaliana]" 10 3 25 11 At5g57230 expressed protein 10 3 25 12 At5g57300 "UbiE/COQ5 methyltransferase family protein similar to ubiquinone biosynthesis methyltransferase COQ5 [Saccharomyces cerevisiae][SP|P49017], ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Escherichia coli][SP|P27851]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 10 3 25 13 At5g57450 DNA repair family protein contains similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3 (X-ray repair cross-complementing protein 3) [Homo sapiens] 10 3 25 14 At5g57510 hypothetical protein 10 3 25 15 At5g57655 xylose isomerase family protein contains similarity to Xylose isomerase (EC 5.3.1.5) (Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus] 10 3 25 16 At5g57690 "diacylglycerol kinase, putative contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 10 3 25 17 At5g60250 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam domain PF01485: IBR domain" 10 3 25 18 At5g60310 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 10 3 25 19 At5g60450 auxin-responsive factor (ARF4) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA auxin response factor 4 (ARF4) GI:4102597 10 3 25 20 At5g60510 "undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein contains putative undecaprenyl diphosphate synthase domain [PF01255]; similar to S. cerevisiae dehydrodolichyl diphosphate synthetase (DEDOL-PP synthase)(Rer2)[SP|P35196], a cis-prenyltransferase" 10 3 25 21 At5g60640 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 10 3 25 22 At5g60700 "glycosyltransferase family protein 2 contains Pfam profile PF00535: glycosyl transferase, group 2 family protein" 10 3 25 23 At5g60870 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 10 3 25 24 At5g60920 "phytochelatin synthetase, putative / COBRA cell expansion protein COB, putative similar to phytochelatin synthetase GI:29570314; similar to GB:AAK56072; identified in Roudier, et al, Plant Phys. (2002) 130:538-548 (PMID:12376623); identical to cDNA putative phytochelatin synthetase GI:3559804; contains Pfam profile PF04833: Phytochelatin synthetase-like conserved region" 10 3 25 25 At5g63610 "protein kinase, putative similar to cyclin-dependent kinase cdc2MsE [Medicago sativa] gi|1806144|emb|CAA65981; contains protein kinase domain, Pfam:PF00069" 10 3 26 1 At5g63670 transcription initiation protein-related contains weak similarity to Transcription initiation protein SPT4 homolog 1 (Swiss-Prot:Q16550) [Mus musculus] 10 3 26 2 At5g63850 "amino acid transporter 4, putative (AAP4) identical to amino acid transporter GI:608671 from [Arabidopsis thaliana];" 10 3 26 3 At5g63900 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 10 3 26 4 At5g64050 "glutamate-tRNA ligase family protein / glutamyl-tRNA synthetase family protein similar to SP|P22250 from Bacillus subtilis, SP|P22249 from Bacillus stearothermophilus; contains Pfam tRNA synthetases class I (E and Q), catalytic domain PF00749" 10 3 26 5 At5g64100 "peroxidase, putative identical to peroxidase ATP3a [Arabidopsis thaliana] gi|1546698|emb|CAA67340" 10 3 26 6 At5g64240 latex-abundant family protein (AMC3) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 10 3 26 7 At5g64300 "riboflavin biosynthesis protein, putative (RIBA) similar to SP|P47924 {Arabidopsis thaliana}, SP|P51695 Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] {Bacillus amyloliquefaciens}; contains Pfam profiles PF00925: GTP cyclohydrolase II, PF00926: 3,4-dihydroxy-2-butanone 4-phosphate synthase" 10 3 26 8 At5g66720 5-azacytidine resistance protein -related contains weak similarity to 5-azacytidine resistance protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces pombe] 10 3 26 9 At5g66760 "succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II identical to SP|O82663 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) {Arabidopsis thaliana}" 10 3 26 10 At5g66930 expressed protein similar to unknown protein (pir||T38383) 10 3 26 11 At5g66970 signal recognition particle-related / SRP-related low similarity to SP|P49966_ARATH Signal recognition particle 54 kDa protein 2 (SRP54) {Arabidopsis thaliana} 10 3 26 12 At5g67130 expressed protein 10 3 26 13 At5g67170 "SEC-C motif-containing protein / OTU-like cysteine protease family protein contains Pfam profiles PF02338: OTU-like cysteine protease, PF02810: SEC-C motif" 10 3 26 14 At5g67340 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 10 3 26 15 At5g67390 expressed protein 10 3 26 16 At3g42740 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790" 10 3 26 17 At3g42790 "PHD finger family protein contains PHD-finger domain, INTERPRO:IPR001965" 10 3 26 18 At3g43110 expressed protein 10 3 26 19 At3g43170 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 10 3 26 20 At3g43380 hypothetical protein 10 3 26 21 At3g43440 expressed protein 10 3 26 22 At3g43600 "aldehyde oxidase, putative identical to gi: 3172025; identical to cDNA putative aldehyde oxidase (AO3) mRNA, partial cds GI:2792303" 10 3 26 23 At3g43682 hypothetical protein 10 3 26 24 Blank Blank 10 3 26 25 Blank Blank 10 4 1 1 atc01 Randomly generated negative control 10 4 1 2 atc07 Randomly generated negative control 10 4 1 3 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 10 4 1 4 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 10 4 1 5 Alien3 Control: Stratagene Spotreport Alien Oligo 10 4 1 6 Alien9 Control: Stratagene Spotreport Alien Oligo 10 4 1 7 atc05 Randomly generated negative control 10 4 1 8 atc11 Randomly generated negative control 10 4 1 9 At1g03560 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 1 10 At1g03650 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to SP|P07347 N-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 10 4 1 11 At1g03790 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 10 4 1 12 At1g03850 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 10 4 1 13 At1g03970 G-box binding factor 4 (GBF4) identical to G-box binding factor 4 (GBF4) SP:P42777 from [Arabidopsis thaliana] 10 4 1 14 At1g04020 "zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 10 4 1 15 At1g04190 tetratricopeptide repeat (TPR)-containing protein low similarity to protein antigen LmSTI1 [Leishmania major] GI:1698880; contains Pfam profile PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come from this gene 10 4 1 16 At1g04250 auxin-responsive protein / indoleacetic acid-induced protein 17 (IAA17) Identical to SP|P93830 Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) {Arabidopsis thaliana}; ESTs gb|H36782 and gb|F14074 come from this gene 10 4 1 17 At1g06910 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 10 4 1 18 At1g06960 "small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative non-consensus splice donor GC at exon 4; similar to spliceosomal protein (U2B) GI:169588 from [Solanum tuberosum]" 10 4 1 19 At1g07130 OB-fold nucleic acid binding domain-containing protein contains InterPro entry IPR004365: OB-fold nucleic acid binding domain 10 4 1 20 At1g07180 "pyridine nucleotide-disulphide oxidoreductase family protein contains similarity to alternative NADH-dehydrogenase GI:3718005 from [Yarrowia lipolytica], SP|P32340 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor (EC 1.6.5.3) (Internal NADH dehydrogenase) {Saccharomyces cerevisiae} ; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 10 4 1 21 At1g07340 "hexose transporter, putative similar to hexose transporter [Lycopersicon esculentum] GI:5734440; contains Pfam profile PF00083: major facilitator superfamily protein" 10 4 1 22 At1g07380 ceramidase family protein contains similarity to mitochondrial ceramidase [Homo sapiens] gi|9246993|gb|AAF86240 10 4 1 23 At1g07500 expressed protein ; expression supported by MPSS 10 4 1 24 At1g07560 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 4 1 25 At1g10040 expressed protein non-consensus GC donor splice site at exon boundary 21576 10 4 2 1 At1g10090 expressed protein 10 4 2 2 At1g10270 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat; similar to ESTs gb|R30192 and gb|AA651017 10 4 2 3 At1g10330 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 2 4 At1g10480 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 10 4 2 5 At1g10530 expressed protein 10 4 2 6 At1g10660 expressed protein 10 4 2 7 At1g10680 "P-glycoprotein, putative similar to P-glycoprotein GI:4204793 from [Solanum tuberosum]" 10 4 2 8 At1g13390 expressed protein 10 4 2 9 At1g13440 "glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative / NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, putative very strong similarity to SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}; contains Pfam profiles PF02800: Glyceraldehyde 3-phosphate dehydrogenase C-terminal domain, PF00044: Glyceraldehyde 3-phosphate dehydrogenase NAD binding domain" 10 4 2 10 At1g13610 expressed protein ; expression supported by MPSS 10 4 2 11 At1g13670 expressed protein 10 4 2 12 At1g13880 ELM2 domain-containing protein contains Pfam profile: PF01448 ELM2 domain 10 4 2 13 At1g13940 expressed protein 10 4 2 14 At1g14130 "2-oxoglutarate-dependent dioxygenase, putative similar to adventitious rooting related oxygenase ARRO-1 from Malus x domestica, gi|3492806; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 10 4 2 15 At1g14170 "KH domain-containing protein location of EST 219C14T7 , gb|N38506" 10 4 2 16 At1g16780 "vacuolar-type H+-translocating inorganic pyrophosphatase, putative similar to vacuolar-type H+-translocating inorganic pyrophosphatase GI:6901676 from [Arabidopsis thaliana]" 10 4 2 17 At1g16840 expressed protein 10 4 2 18 At1g16950 expressed protein 10 4 2 19 At1g17020 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Petunia x hybrida][GI:311658], leucoanthocyanidin dioxygenase [Malus domestica][SP|P51091]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 10 4 2 20 At1g17190 "glutathione S-transferase, putative One of three repeated glutathione transferases. 65% identical to glutathione transferase [Arabidopsis thaliana] (gi|4006934). Location of est 141C5T7 (gb|T46669); supported by fl cDNA gi:14326476gb:AF385691." 10 4 2 21 At1g17250 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 10 4 2 22 At1g17420 "lipoxygenase, putative similar to lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140 [Lycopersicon esculentum]" 10 4 2 23 At1g17470 developmentally regulated GTP-binding protein (DRG1) identical to developmentally regulated GTP binding protein (DRG1) [Arabidopsis thaliana] GI:2345150 10 4 2 24 At1g20370 tRNA pseudouridine synthase family protein similar to SP|Q9WU56 tRNA pseudouridine synthase A (EC 4.2.1.70) (Uracil hydrolyase) {Mus musculus}; contains Pfam profile PF01416: tRNA pseudouridine synthase 10 4 2 25 At1g20450 dehydrin (ERD10) identical to dehydrin ERD10 (Low-temperature-induced protein LTI45) [Arabidopsis thaliana] SWISS-PROT:P42759 10 4 3 1 At1g20580 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3, Sm-D3) [Mus musculus] SWISS-PROT:P43331" 10 4 3 2 At1g20620 "catalase 3 (SEN2) almost identical to catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis thaliana]; identical to catalase 3 (SEN2) mRNA, partial cds GI:3158369" 10 4 3 3 At1g20790 F-box family protein contains Pfam:PF00646 F-box domain 10 4 3 4 At1g20830 expressed protein 10 4 3 5 At1g21000 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 10 4 3 6 At1g21065 expressed protein 10 4 3 7 At1g23730 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 10 4 3 8 At1g23790 expressed protein 10 4 3 9 At1g23930 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 10 4 3 10 At1g23970 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 10 4 3 11 At1g24140 matrixin family protein similar to matrix metalloproteinase [Cucumis sativus] GI:7159629; contains InterPro accession IPR001818: Matrixin 10 4 3 12 At1g24190 paired amphipathic helix repeat-containing protein similar to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 10 4 3 13 At1g24320 "alpha-glucosidase, putative similar to alpha-glucosidase I from GI:16506680 [Arabidopsis thaliana]" 10 4 3 14 At1g24380 hypothetical protein 10 4 3 15 At1g28090 polynucleotide adenylyltransferase family protein low similarity to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 10 4 3 16 At1g28130 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 10 4 3 17 At1g28280 VQ motif-containing protein contains PF05678: VQ motif 10 4 3 18 At1g28330 "dormancy-associated protein, putative (DRM1) identical to dormancy-associated protein [Arabidopsis thaliana] GI:2995990; similar to dormancy-associated protein GI:2605887 from [Pisum sativum]; contains Pfam profile PF05564: Dormancy/auxin associated protein" 10 4 3 19 At1g28430 "cytochrome P450, putative similar to cytochrome P450 (CYP93A1) GI:1435059 from [Glycine max]" 10 4 3 20 At1g28490 syntaxin 61 (SYP61) / osmotic stess-sensitive mutant 1 (OSM1) identical to SP|Q946Y7 Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1) {Arabidopsis thaliana}; identical to cDNA syntaxin of plants 61 (SYP61) GI:16041649 10 4 3 21 At1g28610 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif" 10 4 3 22 At1g28670 "lipase identical to lipase GB:AAA93262 GI:1145627 [Arabidopsis thaliana] (FEBS Lett. 377 (3), 475-480 (1995))" 10 4 3 23 At1g31820 amino acid permease family protein weak similarity to asc-type amino acid transporter 2 [Mus musculus] GI:18148438; contains Pfam profile PF00324: Amino acid permease 10 4 3 24 At1g31870 expressed protein 10 4 3 25 At1g32070 "GCN5-related N-acetyltransferase (GNAT) family protein / nuclear shuttle interacting protein (NSI) very low similarity to SP|P09453 Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) {Escherichia coli}; contains Pfam profile PF00583: acetyltransferase, GNAT family; PMID 12837950; identical to cDNA nuclear shuttle interacting protein (NSI) GI: 30790420" 10 4 4 1 At1g32140 F-box family protein contains F-box domain Pfam:PF00646 10 4 4 2 At1g32300 "FAD-binding domain-containing protein strong similarity to At5g56490, At2g46740, At2g46750, At2g46760; contains PF01565: FAD binding domain" 10 4 4 3 At1g32360 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 10 4 4 4 At1g32460 expressed protein 10 4 4 5 At1g32520 expressed protein 10 4 4 6 At1g36150 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein low similarity to glucoamylase S1/S2 [Precursor] from Saccharomyces cerevisiae [SP|P08640], proteophosphoglycan from Leishmania major [GI:5420387]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 10 4 4 7 At1g36310 expressed protein 10 4 4 8 At1g36763 hypothetical protein 10 4 4 9 At1g36970 hypothetical protein 10 4 4 10 At1g38380 hypothetical protein 10 4 4 11 At1g40080 hypothetical protein member of hypothetical protein common family 10 4 4 12 At1g41900 "myosin heavy chain-related similar to Myosin heavy chain, skeletal muscle, extraocular (MyHC-eo) (SP:Q9UKX3) {Homo sapiens}" 10 4 4 13 At1g42393 hypothetical protein 10 4 4 14 At1g48310 "SNF2 domain-containing protein / helicase domain-containing protein contains similarity to DNA-dependent ATPase A GI:6651385 from [Bos taurus]}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2" 10 4 4 15 At1g48370 oligopeptide transporter OPT family protein similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein 10 4 4 16 At1g48540 leucine-rich repeat family protein 10 4 4 17 At1g48600 "phosphoethanolamine N-methyltransferase 2, putative (NMT2) very similar to |PEM2_ARATH Putative phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103) (SP:Q944H0){Arabidopsis thaliana}; very similar to Halotolerance protein Hal3b (SP:P94063)[Arabidopsis thaliana]; to similar to GB:AAF61950 from [Spinacia oleracea]" 10 4 4 18 At1g48750 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to TED4 [Zinnia elegans] GI:493721; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 4 4 19 At1g48800 terpene synthase/cyclase family protein similar to terpene cyclase GI:9293912 from [Arabidopsis thaliana] 10 4 4 20 At1g48990 glycine-rich protein / oleosin contains Pfam profile: PF01277 oleosin 10 4 4 21 At1g49040 "stomatal cytokinesis defective / SCD1 protein (SCD1) contains Pfam PF02141: DENN (AEX-3) domain; contains Pfam PF00400: WD domain, G-beta repeat (8 copies); identical to stomatal cytokinesis defective [Arabidopsis thaliana] GI:19743728; supporting cDNA gi|19743727|gb|AY082605.1|; PMID 12874123" 10 4 4 22 At1g52000 "jacalin lectin family protein similar to myrosinase binding protein [Brassica napus] GI:1711296, myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile: PF01419 jacalin-like lectin domain" 10 4 4 23 At1g52080 actin binding protein family contains Prosite PS00019: Actinin-type actin-binding domain signature 1; similar to actin binding protein (GI:28071265) [Arabidopsis thaliana]; similar to A-type inclusion protein (ATI) (Swiss-Prot:P16602) [Cowpox virus] 10 4 4 24 At1g52250 "dynein light chain type 1 family protein similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 10 4 4 25 At1g52310 "protein kinase family protein / C-type lectin domain-containing protein contains protein kinase domain, Pfam:PF00069, PF00059 Lectin C-type domain" 10 4 5 1 At1g52440 hypothetical protein 10 4 5 2 At1g52500 "formamidopyrimidine-DNA glycolase family protein / mutM, putative (MMH-1) identical to mutM homologue-2 [Arabidopsis thaliana] GP:3550983 PMID:9819050; contains Pfam profile PF01149: Formamidopyrimidine-DNA glycosylase" 10 4 5 3 At1g52650 F-box family protein contains F-box domain Pfam:PF00646 10 4 5 4 At1g52700 phospholipase/carboxylesterase family protein similar to lysophospholipase I [Mus musculus] GI:1864159; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 10 4 5 5 At1g55360 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 10 4 5 6 At1g55390 "DC1 domain-containing protein similar to hypothetical protein GI:4204272 from [Arabidopsis thaliana] contains weak PHD zinc finger motifs contains weak PHD zinc finger motifs DC1 domain, a divergent protein kinase C domain of unknown function." 10 4 5 7 At1g55540 "proline-rich family protein contains proline rich extensin domain, INTERPRO:IPR002965" 10 4 5 8 At1g55590 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 4 5 9 At1g55750 transcription factor-related low similarity to SP|Q9DBA9 TFIIH basal transcription factor complex p62 subunit {Mus musculus}; contains Pfam profile PF03909: BSD domain 10 4 5 10 At1g55805 BolA-like family protein contains Pfam profile: PF01722 BolA-like protein 10 4 5 11 At1g55950 "hypothetical protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 10 4 5 12 At1g56010 transcription activator NAC1 (NAC1) contains Pfam PF02365: No apical meristem (NAM) domain; identical to NAC1 GB:AAF21437 GI:6649236 from [Arabidopsis thaliana] 10 4 5 13 At1g60680 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 10 4 5 14 At1g60730 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 10 4 5 15 At1g60920 MADS-box family protein contains SRF-type transcription factor (DNA-binding and dimerisation domain) 10 4 5 16 At1g60970 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 10 4 5 17 At1g61100 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 10 4 5 18 At1g61150 expressed protein similar to Protein C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens] 10 4 5 19 At1g61330 F-box family protein contains Pfam profile: PF00646 F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 10 4 5 20 At1g61390 "S-locus protein kinase, putative contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954" 10 4 5 21 At1g64140 expressed protein similar to putative disease resistance protein GB:CAB40943 GI:4586107 from [Arabidopsis thaliana]; weak similarity to Loricrin (Swiss-Prot:P23490) [Homo sapiens] 10 4 5 22 At1g64190 "6-phosphogluconate dehydrogenase family protein contains Pfam profiles: PF00393 6-phosphogluconate dehydrogenase C-terminal domain, PF03446 NAD binding domain of 6-phosphogluconate" 10 4 5 23 At1g64360 expressed protein 10 4 5 24 At1g64405 expressed protein 10 4 5 25 At1g64590 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 10 4 6 1 At1g64640 plastocyanin-like domain-containing protein contains InterPro:IPR003245 plastocyanin-like domain 10 4 6 2 At1g64810 expressed protein contains Pfam PF05634: Arabidopsis thaliana protein of unknown function (DUF794) 10 4 6 3 At1g64870 hypothetical protein 10 4 6 4 At1g67670 hypothetical protein 10 4 6 5 At1g67710 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain; contains similarity to response regulator proteins from [Arabidopsis thaliana] 10 4 6 6 At1g67850 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 10 4 6 7 At1g67880 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 10 4 6 8 At1g68020 "glycosyl transferase family 20 protein / trehalose-phosphatase family protein similar to SP|Q00764 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit (EC 2.4.1.15) (Trehalose-6-phosphate synthase) {Saccharomyces cerevisiae}; contains Pfam profile: PF02358 trehalose-phosphatase" 10 4 6 9 At1g68070 "zinc finger (C3HC4-type RING finger) family protein very low similarity to RING-H2 finger protein RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 4 6 10 At1g68240 hypothetical protein 10 4 6 11 At1g68300 universal stress protein (USP) family protein similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family 10 4 6 12 At1g70960 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 10 4 6 13 At1g71010 "phosphatidylinositol-4-phosphate 5-kinase family protein low similarity to phosphatidylinositol 3,5-kinase [Candida albicans] GI:14571648; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase" 10 4 6 14 At1g71180 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein similar to SP|P23523 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) {Escherichia coli}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase 10 4 6 15 At1g71235 hypothetical protein 10 4 6 16 At1g71390 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5B [Lycopersicon esculentum] gi|3894391|gb|AAC78595" 10 4 6 17 At1g71450 "AP2 domain-containing transcription factor, putative similar to TINY GB:CAA64359; contains Pfam profile PF00847: AP2 domain" 10 4 6 18 At1g71696 "carboxypeptidase D, putative similar to carboxypeptidase D [Anas platyrhynchos] gi|2789654|gb|AAB96915" 10 4 6 19 At1g71750 phosphoribosyltransferase family protein similar to SP|Q02522 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) (HGPRT) (HGPRTase) {Lactococcus lactis}; contains Pfam profile PF00156: Phosphoribosyl transferase domain 10 4 6 20 At1g74490 "protein kinase, putative similar to protein kinase [Arabidopsis thaliana] gi|2852449|dbj|BAA24695; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 10 4 6 21 At1g74530 expressed protein 10 4 6 22 At1g74730 expressed protein 10 4 6 23 At1g74790 expressed protein contains similarity to hedgehog-interacting protein GI:4868122 from [Mus musculus] 10 4 6 24 At1g74960 "3-ketoacyl-ACP synthase, putative similar to 3-ketoacyl-ACP synthase [Cuphea pulcherrima] gi|3800747|gb|AAC68860; identical to cDNA beta-ketoacyl-ACP synthetase 2 nuclear gene for plastid product GI:14582700" 10 4 6 25 At1g75020 phospholipid/glycerol acyltransferase family protein contains Pfam profile: PF01553 Acyltransferase 10 4 7 1 At1g75180 expressed protein 10 4 7 2 At1g75230 HhH-GPD base excision DNA repair family protein contains Pfam domain PF00730: HhH-GPD superfamily base excision DNA repair protein 10 4 7 3 AT5G57480 PC-1 D03 10 4 7 4 3XSSC PC-1 D15 10 4 7 5 AT1G29930 PC-1 H03 10 4 7 6 3XSSC PC-1 H15 10 4 7 7 AT3G44150 PC-1 L03 10 4 7 8 3XSSC PC-1 L15 10 4 7 9 AT4G00810 PC-1 P03 10 4 7 10 3XSSC PC-1 P15 10 4 7 11 At1g77960 hypothetical protein 10 4 7 12 At1g78020 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 10 4 7 13 At1g78190 expressed protein 10 4 7 14 At1g78230 leucine-rich repeat family protein 10 4 7 15 At1g78410 VQ motif-containing protein contains PF05678: VQ motif 10 4 7 16 At1g78470 hypothetical protein 10 4 7 17 At1g78630 ribosomal protein L13 family protein similar to ribosomal protein L13 GI:170132 from [Spinacia oleracea] 10 4 7 18 At1g78670 "gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to gamma glutamyl hydrolase GI:1679658 SP|P93164 from [Glycine max]" 10 4 7 19 At2g01250 60S ribosomal protein L7 (RPL7B) 10 4 7 20 At2g01280 "transcription factor IIB (TFIIB) family protein contains Pfam domain, PF00382: Transcription factor TFIIB repeat" 10 4 7 21 At2g01430 homeobox-leucine zipper protein 17 (HB-17) / HD-ZIP transcription factor 17 identical to (GI:18857716) homeodomain-leucine zipper protein ATHB-17 (GI:18857716) [Arabidopsis thaliana] 10 4 7 22 At2g01490 "phytanoyl-CoA dioxygenase (PhyH) family protein contains Pfam profile PF05721: Phytanoyl-CoA dioxygenase (PhyH); weak similarity to Phytanoyl-CoA dioxygenase, peroxisomal precursor (EC 1.14.11.18) (Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase) (Swiss-Prot:O14832) [Homo sapiens]" 10 4 7 23 At2g01660 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 10 4 7 24 At2g01710 DNAJ heat shock N-terminal domain-containing protein simlar to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226: DnaJ domain 10 4 7 25 At2g01880 purple acid phosphatase (PAP7) identical to purple acid phosphatase (PAP7) GI:20257476 from [Arabidopsis thaliana]; contains Pfam profile: PF00149 calcineurin-like phosphoesterase 10 4 8 1 At2g01930 expressed protein 10 4 8 2 At2g05100 "chlorophyll A-B binding protein / LHCII type II (LHCB2.1) (LHCB2.3) identical to Lhcb2 protein [Arabidopsis thaliana] GI:4741948, GI:4741944; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 10 4 8 3 At2g05185 expressed protein 10 4 8 4 At2g05420 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 10 4 8 5 At2g05500 expressed protein ; expression supported by MPSS 10 4 8 6 At2g05715 glutamyl-tRNA(Gln) amidotransferase B family protein similar to SP|O30509 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC 6.3.5.-) (Asp/Glu-ADT subunit B) {Bacillus subtilis}; no suitable start codon was identified. This may be a pseudogene. 10 4 8 7 At2g05810 armadillo/beta-catenin repeat family protein weak similarity to CCLS 65 [Silene latifolia] GI:2570102; contains Pfam profile PF00514: Armadillo/beta-catenin-like repeat 10 4 8 8 At2g06000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 8 9 At2g06010 expressed protein 10 4 8 10 At2g14140 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At3g30450, At4g03990, At5g34895, At3g47270, At2g02200" 10 4 8 11 At2g14250 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 10 4 8 12 At2g14560 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 10 4 8 13 At2g14610 pathogenesis-related protein 1 (PR-1) identical to GB:M90508 SP|P33154 10 4 8 14 At2g14777 hypothetical protein No suitable start codon could be identified. 10 4 8 15 At2g14835 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 4 8 16 At2g15000 expressed protein 10 4 8 17 At2g15050 "lipid transfer protein, putative similar to SP|Q42641 nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) {Brassica oleracea}; contains Pfam Protease inhibitor/seed storage/LTP family domain PF00234" 10 4 8 18 At2g18090 "PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein contains Pfam profiles PF02201: BAF60b domain of the SWIB complex, PF02213: GYF domain, PF00628: PHD-finger" 10 4 8 19 At2g18150 "peroxidase, putative peroxidase [Arabidopsis thaliana] gi|6822093|emb|CAB71009; identical to cDNA class III peroxidase ATP36 pseudogene, GI:17530548; contains Pfam profile PF00141: Peroxidase" 10 4 8 20 At2g18280 tubby-like protein 2 (TULP2) identical to tubby-like protein 2 (GI:27372512) {Arabidopsis thaliana}; similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Tubby related protein 2 (Tubby-like protein 2) (P4-6 protein) (Fragment) (SP:P46686) [Mus musculus]; contains Pfam profile: PF01167: Tub family; contains Pfam PF00646: F-box domain 10 4 8 21 At2g18330 AAA-type ATPase family protein contains Pfam profile: PF00004 ATPase family associated with various cellular activities (AAA) 10 4 8 22 At2g18490 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 4 8 23 At2g18550 homeobox-leucine zipper family protein similar to CRHB6 (GI:3868839) [Ceratopteris richardii]; contains Pfam PF00046: Homeobox domain 10 4 8 24 At2g18740 "small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative similar to SWISS-PROT:P08578 small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E, Sm-E, SmE) [Chicken]" 10 4 8 25 At2g18800 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] " 10 4 9 1 At2g21450 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|Q61687 Transcriptional regulator ATRX {Mus musculus}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 10 4 9 2 At2g21510 "DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein, Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain" 10 4 9 3 At2g21680 "kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 10 4 9 4 At2g21750 hypothetical protein 10 4 9 5 At2g21920 hypothetical protein 10 4 9 6 At2g21960 expressed protein 10 4 9 7 At2g22140 expressed protein ; expression supported by MPSS 10 4 9 8 At2g22230 "beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase from Toxoplasma gondii [GI:3850997]; contains Pfam profile PF01377 Thioester dehydratase" 10 4 9 9 At2g25110 MIR domain-containing protein similar to SP|Q99470 Stromal cell-derived factor 2 precursor (SDF-2) {Homo sapiens}; contains Pfam profile PF02815: MIR domain 10 4 9 10 At2g25170 chromatin remodeling factor CHD3 (PICKLE) identical to chromatin remodeling factor CHD3 [Arabidopsis thaliana] GI:6478518 10 4 9 11 At2g25340 synaptobrevin family protein similar to Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens] 10 4 9 12 At2g25410 hypothetical protein 10 4 9 13 At2g25590 agenet domain-containing protein contains Pfam PF05641: Agenet domain 10 4 9 14 At2g25625 expressed protein 10 4 9 15 At2g25760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 4 9 16 At2g25820 "transcription factor, putative similar to TINY [Arabidopsis thaliana] GI:1246403" 10 4 9 17 At2g28440 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains similarity to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +" 10 4 9 18 At2g28500 LOB domain protein 11 / lateral organ boundaries domain protein 11 (LBD11) identical to SP|Q9SK08 LOB domain protein 11 {Arabidopsis thaliana} 10 4 9 19 At2g28640 exocyst subunit EXO70 family protein contains HEAT repeat and Pfam domain PF03081:exocyst subunit EXO70 10 4 9 20 At2g28700 MADS-box protein-related contains INTERPRO: IPR002100 MADS-box domain 10 4 9 21 At2g28870 expressed protein 10 4 9 22 At2g28930 protein kinase (APK1b) identical to protein kinase APK1B [Arabidopsis thaliana] SWISS-PROT:P46573 10 4 9 23 At2g29120 "glutamate receptor family protein (GLR2.7) plant glutamate receptor family, PMID:11379626" 10 4 9 24 At2g29180 expressed protein 10 4 9 25 At2g31850 expressed protein 10 4 10 1 At2g31900 "myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF01843 DIL domain, PF00612 IQ calmodulin-binding motif, PF02736 myosin N-terminal SH3-like domain" 10 4 10 2 At2g32060 40S ribosomal protein S12 (RPS12C) 10 4 10 3 At2g32100 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 10 4 10 4 At2g32260 "cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative strong similarity to CTP:phosphocholine cytidylyltransferase [Brassica napus] GI:1418125; contains Pfam profile PF01467: Cytidylyltransferase" 10 4 10 5 At2g32300 uclacyanin I identical to uclacyanin I GI:3399767 from [Arabidopsis thaliana]; contains Pfam profile PF02298: Plastocyanin-like domain; identical to cDNA uclacyanin I GI:3399766 10 4 10 6 At2g32480 "membrane-associated zinc metalloprotease, putative similar to Hypothetical zinc metalloprotease All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.} Pfam PF00595: PDZ domain (Also known as DHR or GLGF); contains TIGRFAM TIGR00054: membrane-associated zinc metalloprotease, putative" 10 4 10 7 At2g32520 dienelactone hydrolase family protein low similarity to dienelactone hydrolase [Pseudomonas resinovorans] GI:13094163; contains Pfam profile PF01738: Dienelactone hydrolase family 10 4 10 8 At2g35100 exostosin family protein contains Pfam profile: PF03016 Exostosin family 10 4 10 9 At2g35155 expressed protein 10 4 10 10 At2g35320 expressed protein 10 4 10 11 At2g35380 peroxidase 20 (PER20) (P20) identical to SP|Q9SLH7 Peroxidase 20 precursor (EC 1.11.1.7) (Atperox P20) (ATP28a) {Arabidopsis thaliana} 10 4 10 12 At2g35550 expressed protein 10 4 10 13 At2g35605 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 10 4 10 14 At2g35720 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|O54946 DnaJ homolog subfamily B member 6 (Heat shock protein J2) Mus musculus; contains Pfam profile PF00226 DnaJ domain 10 4 10 15 At2g35760 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 10 4 10 16 At2g38360 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 10 4 10 17 At2g38410 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate HRS isoform 2 [Homo sapiens] GI:9022389; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 10 4 10 18 At2g38590 F-box family protein contains Pfam profile: PF00646 F-box domain 10 4 10 19 At2g38650 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 10 4 10 20 At2g38810 "histone H2A, putative strong similarity to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 10 4 10 21 At2g38823 expressed protein 10 4 10 22 At2g38960 "endoplasmic reticulum oxidoreductin 1 (ERO1) family protein contains Pfam domain, PF04137: Endoplasmic Reticulum Oxidoreductin 1 (ERO1)" 10 4 10 23 At2g39010 "aquaporin, putative similar to plasma membrane aquaporin 2b GI:7209560 from [Raphanus sativus]" 10 4 10 24 At2g41540 NAD-dependent glycerol-3-phosphate dehydrogenase family protein weak similarity to SP|P46919 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) {Bacillus subtilis}; contains Pfam profile PF01210: NAD-dependent glycerol-3-phosphate dehydrogenase 10 4 10 25 At2g41600 expressed protein 10 4 11 1 At2g41720 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 11 2 At2g41780 expressed protein 10 4 11 3 At2g41930 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 4 11 4 At2g41980 seven in absentia (SINA) family protein similar to siah-1A protein [Mus musculus] GI:297035; contains Pfam profile PF03145: Seven in absentia protein family 10 4 11 5 At2g42130 expressed protein contains weak hit to Pfam PF04755: PAP_fibrillin 10 4 11 6 At2g42190 expressed protein ; similar to GP|9826|X07453 10 4 11 7 At2g44800 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase SP|Q96330 {Arabidopsis thaliana}, SP|Q07512 {Petunia hybrida}; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 10 4 11 8 At2g44850 expressed protein 10 4 11 9 At2g45000 expressed protein contains Pfam profile: PF05064 Nsp1-like C-terminal region 10 4 11 10 At2g45050 zinc finger (GATA type) family protein identical to cDNA GATA transcription factor 2 GI:2959731 10 4 11 11 At2g45220 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 10 4 11 12 At2g45290 "transketolase, putative strong similarity to transketolase 1 [Capsicum annuum] GI:3559814; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain, PF00456: Transketolase, thiamine diphosphate binding domain" 10 4 11 13 At2g45480 expressed protein 10 4 11 14 At2g45540 "WD-40 repeat family protein / beige-related contains Pfam PF02138: Beige/BEACH domain; contains Pfam PF00400: WD domain, G-beta repeat (3 copies)" 10 4 11 15 At2g48130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 4 11 16 At2g16365 F-box family protein contains Pfam:PF00646 F-box domain 10 4 11 17 At3g01100 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 10 4 11 18 At3g01170 expressed protein 10 4 11 19 At3g01320 paired amphipathic helix repeat-containing protein low similarity to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 10 4 11 20 At3g01360 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 10 4 11 21 At3g01500 "carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 (CA1) nearly identical to SP|P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana}" 10 4 11 22 At3g01540 "DEAD box RNA helicase (DRH1) identical to RNA helicase DRH1 GB:BAA28347 GI:3149952 [Arabidopsis thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 10 4 11 23 At3g04130 pentatricopeptide (PPR) repeat-containing protein 10 4 11 24 At3g04190 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin type2 GB:CAA63023 [SP|P92996] [Arabidopsis thaliana]" 10 4 11 25 At3g04360 C2 domain-containing protein low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 10 4 12 1 At3g04400 60S ribosomal protein L23 (RPL23C) similar to ribosomal protein L17 GB:AAA34113.1 from [Nicotiana tabacum] 10 4 12 2 At3g04580 "ethylene receptor, putative (EIN4) similar to ethylene receptor GB:AAC31123 [Malus domestica], identical to putative ethylene receptor GB:AAD02485 [Arabidopsis thaliana]; Pfam HMM hit: response regulator receiver domain, signal C terminal domain" 10 4 12 3 At3g04610 KH domain-containing protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis thaliana]; Pfam HMM hit: KH domain family of RNA binding proteins 10 4 12 4 At3g04770 40S ribosomal protein SA (RPSaB) identical to p40 protein homolog GB:AAB67866 [Arabidopsis thaliana]; similar to 40S ribosomal protein SA (P40) GB:O65751 [Cicer arietinum] 10 4 12 5 At3g04810 "protein kinase, putative similar to LSTK-1-like kinase [Lycopersicon esculentum] GI:15637110; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 10 4 12 6 At3g07310 expressed protein 10 4 12 7 At3g07360 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 10 4 12 8 At3g07510 expressed protein 10 4 12 9 At3g07540 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 10 4 12 10 At3g07700 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 10 4 12 11 At3g07750 "3' exoribonuclease family domain 1-containing protein similar to SP|Q15024 Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA processing protein 42) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 10 4 12 12 At3g07890 RabGAP/TBC domain-containing protein similar to plant adhesion molecule 1 [Arabidopsis thaliana] GI:3511223; contains Pfam profile PF00566: TBC domain 10 4 12 13 At3g07930 HhH-GPD base excision DNA repair family protein 10 4 12 14 At3g10910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 10 4 12 15 At3g10940 protein phosphatase-related similar to protein phosphatase PTPKIS1 protein (GI:11595504) [Arabidopsis thaliana] 10 4 12 16 At3g11070 "outer membrane OMP85 family protein contains Pfam profile PF01103: outer membrane protein, OMP85 family" 10 4 12 17 At3g11130 "clathrin heavy chain, putative similar to Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo sapiens]" 10 4 12 18 At3g11300 hypothetical protein 10 4 12 19 At3g11350 hypothetical protein 10 4 12 20 At3g11480 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] and to SAM:salicylic acid carboxyl methyltransferase (SAMT)[GI:6002712][Clarkia breweri] 10 4 12 21 At3g11530 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 10 4 12 22 At3g13910 expressed protein 10 4 12 23 At3g13970 "autophagy 12b (APG12b) identical to autophagy 12b [Arabidopsis thaliana], gi|19912171|dbj|BAB88397" 10 4 12 24 At3g14110 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 10 4 12 25 At3g14130 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to Chain A, Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24 Replaced By Phe (Y24f) gi|999542" 10 4 13 1 At3g14260 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567); expression supported by MPSS 10 4 13 2 At3g14320 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 10 4 13 3 At3g14470 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 10 4 13 4 At3g14530 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to SP|P34802 Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] {Arabidopsis thaliana}; contains Pfam profile PF00348: Polyprenyl synthetase" 10 4 13 5 At3g17100 expressed protein 10 4 13 6 At3g17150 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 10 4 13 7 At3g17270 F-box family protein 10 4 13 8 At3g17340 importin-related contains Pfam profile PF03810: Importin-beta N-terminal domain 10 4 13 9 At3g17500 F-box family protein contains Pfam profile: PF00646 F-box domain 10 4 13 10 At3g17540 F-box family protein similar to hypothetical protein GB:AAD18122 from [Arabidopsis thaliana];contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 10 4 13 11 At3g17680 expressed protein similar to GB:AAD49756 from [Arabidopsis thaliana] 10 4 13 12 At3g17740 expressed protein 10 4 13 13 At3g20380 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 10 4 13 14 At3g20440 "glycoside hydrolase family 13 protein similar to 1,4-alpha-glucan branching enzyme [Solanum tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum tuberosum} SP|P30924; contains Pfam profiles: PF00128 Alpha amylase catalytic domain, PF02922 Isoamylase N-terminal domain" 10 4 13 15 At3g20610 "non-race specific disease resistance protein, putative similar to non-race specific disease resistance protein NDR1 [Arabidopsis thaliana] gi|2754816|gb|AAB95208" 10 4 13 16 At3g20670 "histone H2A, putative strong similarity to histone H2A GB:AAF64418 GI:7595337 from Arabidopsis thaliana, Triticum aestivum GI:536892; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 10 4 13 17 At3g20830 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 4 13 18 At3g20880 "zinc finger (C2H2 type) protein (WIP4) identical to WIP4 protein [Arabidopsis thaliana] gi|18376500|emb|CAC86168; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 4 13 19 At3g21110 "phosphoribosylamidoimidazole-succinocarboxamide synthase / SAICAR synthetase (PUR7) identical to phosphoribosylamidoimidazole-succinocarboxamide synthase, chloroplast [precursor] SP:P38025 from [Arabidopsis thaliana]" 10 4 13 20 At3g21170 F-box family protein contains Pfam profile: PF00646 F-box domain 10 4 13 21 At3g23840 "transferase family protein low similarity to hypersensitivity-related gene [Nicotiana tabacum] GI:1171577, acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna] GI:6166330; contains Pfam profile PF02458: Transferase family" 10 4 13 22 At3g23900 RNA recognition motif (RRM)-containing protein 10 4 13 23 At3g24070 zinc knuckle (CCHC-type) family protein contains Pfam profile: PF00098 zinc knuckle 10 4 13 24 At3g24120 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 10 4 13 25 At3g24270 hypothetical protein 10 4 14 1 At3g24320 "DNA mismatch repair MutS family (MSH1) low similarity to SP|Q56239 DNA mismatch repair protein mutS {Thermus aquaticus}; contains Pfam profiles PF05190: MutS family domain IV, PF01624: MutS domain I, PF01541: Endo/excinuclease amino terminal domain" 10 4 14 2 At3g24506 expressed protein 10 4 14 3 At3g24535 expressed protein ; expression supported by MPSS 10 4 14 4 At3g27290 F-box family protein-related contains weak similarity to PPA [Mus musculus] GP|18568225|gb|AAL75967 10 4 14 5 At3g27340 expressed protein 10 4 14 6 At3g27500 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 4 14 7 At3g27560 protein kinase (ATN1) almost identical (1 amino acid difference) to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387 10 4 14 8 At3g27740 carbamoyl-phosphate synthase [glutamine-hydrolyzing] (CARA) / glutamine-dependent carbamoyl-phosphate synthase small subunit identical to carbamoyl phosphate synthetase small subunit GI:2462781 [Arabidopsis thaliana] 10 4 14 9 At3g27820 "monodehydroascorbate reductase, putative similar to cytosolic monodehydroascorbate reductase GB:BAA77214 [Oryza sativa]" 10 4 14 10 At3g27990 "expressed protein Unusual gene which contains a pectinesterase gene within a downstream UTR intron, transcribed on the opposite strand; supported by cDNA gi:14596042" 10 4 14 11 At3g28050 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 10 4 14 12 At3g32200 hypothetical protein 10 4 14 13 At3g32400 "formin homology 2 domain-containing protein / FH2 domain-containing protein common family members: At2g43800, At3g25500, At5g48360, At4g15200, At3g05470, At3g07540, At5g07780, At5g07650 [Arabidopsis thaliana];" 10 4 14 14 At3g33393 hypothetical protein 10 4 14 15 At3g33230 hypothetical protein 10 4 14 16 At3g42200 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 10 4 14 17 At3g42320 "hypothetical protein various predicted Helicases, Arabidopsis thaliana" 10 4 14 18 At3g42530 "Ulp1 protease family similar to At5g28170, At1g35110, At1g44880, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 10 4 14 19 At3g42580 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 10 4 14 20 At3g45690 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 4 14 21 At3g45750 expressed protein 10 4 14 22 At3g45910 hypothetical protein 10 4 14 23 At3g45970 "expansin family protein (EXPL1) similar to cim1 induced allergen, Glycine max, EMBL:U03860; expansin-like gene, PMID:11641069, www.bio.psu.edu/expansins" 10 4 14 24 At3g46150 hypothetical protein 10 4 14 25 At3g46210 "3' exoribonuclease family domain 1-containing protein similar to SP|Q9NQT4 Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal RNA processing protein 46) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 10 4 15 1 At3g46400 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 4 15 2 At3g46460 ubiquitin-conjugating enzyme 13 (UBC13) E2; identical to gi:992706 10 4 15 3 At3g49250 expressed protein 10 4 15 4 At3g49305 "hypothetical protein contains proline-rich extensin domains, INTERPRO:IPR002965" 10 4 15 5 At3g49470 "nascent polypeptide-associated complex (NAC) domain-containing protein similar to alpha-NAC, non-muscle form [Mus musculus] GI:1666690; contains Pfam profile PF01849: NAC domain" 10 4 15 6 At3g49530 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC2 - Arabidopsis thaliana, EMBL:AF201456" 10 4 15 7 At3g49710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 15 8 At3g49770 "hypothetical protein heat shock protein 108 precursor, Gallus gallus, PIR:HHCH08" 10 4 15 9 At3g49950 "scarecrow transcription factor family protein lateral suppressor protein - Lycopersicon esculentum, EMBL:AF098674" 10 4 15 10 At3g50010 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 4 15 11 At3g52710 "expressed protein predicted protein, Arabidopsis thaliana" 10 4 15 12 At3g52750 "chloroplast division protein, putative strong similarity to plastid division protein FtsZ [Arabidopsis thaliana] GI:14195704, chloroplast division protein AtFtsZ2-1 [Arabidopsis thaliana] GI:15636809" 10 4 15 13 At3g52910 expressed protein nearly identical to transcription activator GRL4 [Arabidopsis thaliana] GI:21539886 (unpublished) 10 4 15 14 At3g52940 C-14 sterol reductase / delta(14)-sterol reductase / FACKEL (FK) identical to gi:9082182 10 4 15 15 At3g53110 "DEAD/DEAH box helicase, putative RNA helicase, Mus musculus, PIR:I49731" 10 4 15 16 At3g53170 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 10 4 15 17 At3g53310 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 10 4 15 18 At3g53360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 15 19 At3g55960 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 10 4 15 20 At3g56020 "60S ribosomal protein L41 (RPL41G) ribosomal protein GL41, upland cotton, PIR:S38425" 10 4 15 21 At3g56180 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 10 4 15 22 At3g56240 copper homeostasis factor / copper chaperone (CCH) (ATX1) identical to gi:3168840 Pfam profile PF00403: Heavy-metal-associated domain 10 4 15 23 At3g56420 thioredoxin family protein similar to thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam profile: PF00085 Thioredoxin 10 4 15 24 At3g56480 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha) (Alpha isomyosin) (Fragment) (Swiss-Prot:P04460) [Oryctolagus cuniculus]" 10 4 15 25 At3g56660 bZIP transcription factor family protein similar to AtbZIP transcription factor GI:17065880 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 10 4 16 1 At3g56720 expressed protein 10 4 16 2 At3g59530 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324] 10 4 16 3 At3g59600 "DNA-directed RNA polymerase I, II, and III, putative similar to SP|P52434 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide (EC 2.7.7.6) (RPB17) (RPB8) {Homo sapiens}; contains Pfam profile PF03870: RNA polymerase Rpb8" 10 4 16 4 At3g59760 "cysteine synthase, mitochondrial, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to SP|Q43725 Cysteine synthase, mitochondrial precursor (EC 4.2.99.8) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}" 10 4 16 5 At3g59810 "small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative similar to SWISS-PROT:Q9Y4Y8 U6 snRNA-associated Sm-like protein LSm6 [Mus musculus]" 10 4 16 6 At3g59970 methylenetetrahydrofolate reductase 1 (MTHFR1) identical to methylenetetrahydrofolate reductase MTHFR1 [Arabidopsis thaliana] GI:5911425 10 4 16 7 At3g60010 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At13), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 from [Arabidopsis thaliana]" 10 4 16 8 At3g60180 "uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP kinase) (Swiss-Prot:O04905) [Arabidopsis thaliana]" 10 4 16 9 At3g60240 "MIF4G domain-containing protein / MA3 domain-containing protein similar to eukaryotic protein synthesis initiation factor [Homo sapiens] GI:3941724; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain" 10 4 16 10 At3g62960 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 10 4 16 11 At3g63020 "hypothetical protein predicted protein, Arabidopsis thaliana" 10 4 16 12 At3g63200 "patatin-related low similarity to patatin-like latex protein allergen Hev b 7 - Hevea brasiliensis, EMBL:AF113546; contains patatin domain PF01734" 10 4 16 13 At3g63250 homocysteine S-methyltransferase 2 (HMT-2) 99.7% identical to homocysteine S-methyltransferase AtHMT-2 (GI:6685163) [Arabidopsis thaliana] 10 4 16 14 At3g63370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 16 15 At3g63410 "chloroplast inner envelope membrane protein, putative (APG1) similar to SP|P23525 37 kDa inner envelope membrane protein, chloroplast precursor (E37) {Spinacia oleracea}; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 10 4 16 16 At4g00020 BRCA2 repeat-containing protein low similarity to SP|P51587 Breast cancer type 2 susceptibility protein {Homo sapiens}; contains Pfam profile PF00634: BRCA2 repeat 10 4 16 17 At4g00080 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q42534; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 10 4 16 18 At4g02440 F-box family protein to circadian clock coupling factor ZGT (GP|14210079) {Nicotiana tabacum}; contains Pfam PF00646: F-box domain 10 4 16 19 At4g02485 "oxidoreductase, 2OG-Fe(II) oxygenase family protein contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 10 4 16 20 At4g02640 "bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor; identical to cDNA bZIP protein BZO2H1, alternatively spliced GI:10954094" 10 4 16 21 At4g02700 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:2130944 10 4 16 22 At4g02860 phenazine biosynthesis PhzC/PhzF family protein contains Pfam profile: PF02567 phenazine biosynthesis-like protein 10 4 16 23 At4g02920 expressed protein 10 4 16 24 At4g03090 expressed protein 10 4 16 25 At4g03120 "proline-rich family protein similar to U1 small nuclear ribonucleoprotein C; contains proline rich extensin domains, INTERPRO:IPR002965" 10 4 17 1 At4g07820 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 10 4 17 2 At4g07940 hypothetical protein 10 4 17 3 At4g08170 "inositol 1,3,4-trisphosphate 5/6-kinase family protein similar to inositol phosphate kinase (GI:27549256) [Zea mays]; similar to inositol 1,3,4-trisphosphate 5/6-kinase (GI:3396079) [Arabidopsis thaliana]" 10 4 17 4 At4g08210 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 4 17 5 At4g08360 KOW domain-containing protein contains Pfam PF00467: KOW motif 10 4 17 6 At4g08410 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965;" 10 4 17 7 At4g08593 expressed protein ; expression supported by MPSS 10 4 17 8 At4g08670 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 10 4 17 9 At4g11480 protein kinase family protein contains Pfam PF00069: Protein kinase domain 10 4 17 10 At4g11560 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 10 4 17 11 At4g11740 "ara4-interacting protein, putative (SAY1) similar to Ara4-interacting protein [Arabidopsis thaliana] GI:13160609; contains Pfam profiles PF00789: UBX domain, PF02809: Ubiquitin interaction motif" 10 4 17 12 At4g11790 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein contains Pfam profile PF00638: RanBP1 domain 10 4 17 13 At4g11960 "expressed protein hypothetical protein F7H19.70 - Arabidopsis thaliana, PID:e1310057" 10 4 17 14 At4g12000 expressed protein 10 4 17 15 At4g12170 "thioredoxin family protein similar to SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor (TRX-M4) {Arabidopsis thaliana}; contains Pfam profile: PF00085 Thioredoxin" 10 4 17 16 At4g12240 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 10 4 17 17 At4g14746 expressed protein 10 4 17 18 At4g14800 "20S proteasome beta subunit D2 (PBD2) (PRCGA) identical to SP|O24633 Proteasome subunit beta type 2-2 (EC 3.4.25.1) (20S proteasome alpha subunit D2) {Arabidopsis thaliana}, cDNA proteasome subunit prcga GI:2511571" 10 4 17 19 At4g14940 "copper amine oxidase, putative highly similar to copper amine oxidase [Arabidopsis thaliana] gi|2654118|gb|AAB87690" 10 4 17 20 At4g14970 hypothetical protein 10 4 17 21 At4g15100 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)] 10 4 17 22 At4g15160 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family" 10 4 17 23 At4g15320 "cellulose synthase family protein similar to Zea mays cellulose synthase-5 [gi:9622882], -2 [gi:9622876], -1 [gi:9622874]" 10 4 17 24 At4g15380 cytochrome P450 family protein similar to CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine max] 10 4 17 25 At4g17840 expressed protein 10 4 18 1 At4g17895 "ubiquitin-specific protease 20, putative (UBP20) identical to ubiquitin-specific protease 20 GI:11993480 [Arabidopsis thaliana]" 10 4 18 2 At4g18040 eukaryotic translation initiation factor 4E 1 / eIF-4E1 / mRNA cap-binding protein 1 (EIF4E1) identical to SP|O23252 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F P26 subunit) {Arabidopsis thaliana} 10 4 18 3 At4g18090 hypothetical protein 10 4 18 4 At4g18270 glycosyl transferase family 4 protein contains Pfam profile PF00953: Glycosyl transferase 10 4 18 5 At4g18330 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site." 10 4 18 6 At4g18430 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303742 from [Pisum sativum]" 10 4 18 7 At4g18480 "magnesium-chelatase subunit chlI, chloroplast / Mg-protoporphyrin IX chelatase (CHLI) (CS) (CH42) identical to SP|P161127 Magnesium-chelatase subunit chlI, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Protein CS/CH-42) {Arabidopsis thaliana}" 10 4 18 8 At4g21260 hypothetical protein 10 4 18 9 At4g21323 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 10 4 18 10 At4g21470 "riboflavin kinase/FAD synthetase family protein contains Pfam profiles PF01687: Riboflavin kinase / FAD synthetase, PF00702: haloacid dehalogenase-like hydrolase" 10 4 18 11 At4g21530 transducin family protein / WD-40 repeat family protein contains 1 WD-40 repeat (PF00400); similar to anaphase-promoting complex subunit 4 GI:6180011 [Homo sapiens]; supported by EST GB:AU237382 10 4 18 12 At4g21680 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 4 18 13 At4g21740 expressed protein 10 4 18 14 At4g21890 expressed protein 10 4 18 15 At4g21940 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423" 10 4 18 16 At4g24480 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase CTR1 [Arabidopsis thaliana] SWISS-PROT:Q05609" 10 4 18 17 At4g24540 MADS-box family protein 10 4 18 18 At4g24690 "ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles PF00627: Ubiquitin-associated (UBA)/TS-N domain, PF00569: Zinc finger ZZ type domain, PF00564: PB1 domain" 10 4 18 19 At4g24730 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 10 4 18 20 At4g24910 hypothetical protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 10 4 18 21 At4g24970 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Mus musculus] GI:5410255; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 10 4 18 22 At4g25120 UvrD/REP helicase family protein contains Pfam PF00580: UvrD/REP helicase 10 4 18 23 At4g25180 DNA-directed RNA polymerase III RPC4 family protein contains Pfam profile PF05132: RNA polymerase III RPC4 10 4 18 24 At4g27730 "oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}, oligopeptide transporter Opt1p [Candida albicans] GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 10 4 18 25 At4g27800 protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1) identical to SP|P49599|P2C3_ARATH Protein phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis thaliana}; similar to protein phosphatase-2C; PP2C (GI:3643090) [Mesembryanthemum crystallinum] 10 4 19 1 At4g27940 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 10 4 19 2 At4g27990 YGGT family protein contains Pfam profile PF02325: YGGT family (unknown function) 10 4 19 3 At4g28140 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.4 - Arabidopsis thaliana, PID:g2281633" 10 4 19 4 At4g28180 expressed protein 10 4 19 5 At4g28340 hypothetical protein 10 4 19 6 At4g28390 "ADP, ATP carrier protein, mitochondrial, putative / ADP/ATP translocase, putative / adenine nucleotide translocator, putative similar to mitochondrial ADP,ATP carrier protein SP:P12857 from [Zea mays]" 10 4 19 7 At4g30993 expressed protein 10 4 19 8 At4g31020 expressed protein 10 4 19 9 At4g31150 endonuclease V family protein contains Pfam PF04493: Endonuclease V 10 4 19 10 At4g31230 "protein kinase family protein contains Pfam profiles PF00069: Protein kinase domain, PF00582: universal stress protein family" 10 4 19 11 At4g31410 expressed protein 10 4 19 12 At4g31450 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 10 4 19 13 At4g31600 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related contains weak similarity to UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP- GlcA/UDP-GalNAc transporter) (Swiss-Prot:Q9NTN3) [Homo sapiens] 10 4 19 14 At4g31650 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 10 4 19 15 At4g34150 C2 domain-containing protein similar to calcium-dependent protein kinase [Dunaliella tertiolecta] GI:6644464; contains Pfam profile PF00168: C2 domain 10 4 19 16 At4g34210 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At11), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 from [Arabidopsis thaliana]" 10 4 19 17 At4g34320 "expressed protein similar to At14a, GI:11994571 and GI:11994573 [Arabidopsis thaliana]" 10 4 19 18 At4g34380 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to Myosin heavy chain kinase B (MHCK B).(SP:P90648) [Dictyostelium discoideum] 10 4 19 19 At4g34540 isoflavone reductase family protein similar to phenylcoumaran benzylic ether reductase homolog Fi1 [Forsythia x intermedia][GI:7578895]; contains isoflavone reductase domain PF02716 10 4 19 20 At4g34590 bZIP transcription factor family protein similar to common plant regulatory factor 7 GI:9650828 from [Petroselinum crispum] 10 4 19 21 At4g34770 "auxin-responsive family protein similar to auxin-induced protein X10A (SP:P33080) [Glycine max]; small auxin up-regulated RNA, Malus domestica, gb:Z93766" 10 4 19 22 At4g34830 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 19 23 AT5G57480 PC-1 D03 10 4 19 24 3XSSC PC-1 D15 10 4 19 25 AT1G29930 PC-1 H03 10 4 20 1 3XSSC PC-1 H15 10 4 20 2 AT3G44150 PC-1 L03 10 4 20 3 3XSSC PC-1 L15 10 4 20 4 AT4G00810 PC-1 P03 10 4 20 5 3XSSC PC-1 P15 10 4 20 6 At4g37450 arabinogalactan-protein (AGP18) identical to gi_11935088_gb_AAG41964 10 4 20 7 At4g37510 ribonuclease III family protein contains Pfam profile PF00636 RNase3 domain 10 4 20 8 At4g37680 "expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073)" 10 4 20 9 At4g37730 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 10 4 20 10 At4g37910 "heat shock protein 70, mitochondrial, putative / HSP70, mitochondrial, putative strong similarity to SP|Q01899 Heat shock 70 kDa protein, mitochondrial precursor {Phaseolus vulgaris}" 10 4 20 11 At4g37980 "mannitol dehydrogenase, putative (ELI3-1) identical to GI:16267" 10 4 20 12 At4g38120 expressed protein 10 4 20 13 At4g38160 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 10 4 20 14 At5g01580 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 10 4 20 15 At5g01630 BRCA2 repeat-containing protein low similarity to breast cancer susceptibility protein [Gallus gallus] GI:19568157; contains Pfam profile PF00634: BRCA2 repeat 10 4 20 16 At5g01770 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein mip1 (SP:P87141) [Schizosaccharomyces pombe] 10 4 20 17 At5g01830 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 10 4 20 18 At5g02010 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 10 4 20 19 At5g02040 prenylated rab acceptor (PRA1) family protein contains Pfam PF03208: PRA1 family protein 10 4 20 20 At5g02210 expressed protein ; expression supported by MPSS 10 4 20 21 At5g02260 "expansin, putative (EXP9) similar to expansin precursor GI:4138914 from [Lycopersicon esculentum]; alpha-expansin gene family, PMID:11641069" 10 4 20 22 At5g05000 "translocate of chloroplast 34 (TOC34) / GTP-binding protein (OEP34) contains Pfam PF04548: AIG1 family;contains TIGRFAM TIGR00991: GTP-binding protein and TIGR00231: small GTP-binding protein domain; 99.7% identical to atToc34 protein (GI:11557975) [Arabidopsis thaliana]; similar to Chain A, Pea Toc34 - A Novel Gtpase Of The Chloroplast Protein Translocon (GI:1865556) [Pisum sativum]; almost identical to SP:Q38906 Translocase of chloroplast 34; identical to cDNA GTP-binding protein (OEP34) GI:1151243" 10 4 20 23 At5g05040 expressed protein weak similarity to SP|P37842 Multicystatin precursor (MC). [Potato] {Solanum tuberosum} 10 4 20 24 At5g05220 expressed protein 10 4 20 25 At5g05280 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 10 4 21 1 At5g05410 DRE-binding protein (DREB2A) identical to DREB2A GI:3738230 from [Arabidopsis thaliana] ; supported by cDNA:gi_3738229_dbj_AB007790.1_AB007790 10 4 21 2 At5g05470 "eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative similar to SWISS-PROT:P20459 eukaryotic translation initiation factor 2 alpha subunit (eIF-2- alpha) [Saccharomyces cerevisiae]; identical to cDNA cohesin GI:6682280" 10 4 21 3 At5g05600 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Citrus unshiu][gi:4126403], leucoanthocyanidin dioxygenase [Daucus carota][gi:5924383]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 10 4 21 4 At5g05657 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to hin1 (GP:1619321) {Nicotiana tabacum}; confirmed by cDNA sequence Ceres:19481; confirmed by cDNA sequence Ceres:8166 non-consensus donor splice site (AC) at the exon|intron boundary at 9522; non-consensus acceptor splice site (At) at the intron|exon boundary at 9724; non-consensus donor splice site (GC) at the exon|intron boundary at 10302; non-consensus acceptor splice site (TC) at the intron|exon boundary at 10342; confirmed by cDNA sequence Ceres:8166 10 4 21 5 At5g08320 "expressed protein predicted proteins, Homo sapiens and Caenorhabditis elegans" 10 4 21 6 At5g08350 "GRAM domain-containing protein / ABA-responsive protein-related contains similarity to ABA-responsive protein in barley (GI:4103635) [Hordeum vulgare] [J. Exp. Bot. 50, 727-728 (1999); FH protein interacting protein FIP1, Arabidopsis thaliana, EMBL:AF174428; contains Pfam PF02893: GRAM domain" 10 4 21 7 At5g08500 transmembrane CLPTM1 family protein contains Pfam profile PF05602: Cleft lip and palate transmembrane protein 1 (CLPTM1) 10 4 21 8 At5g08535 "D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain; contains a 2nt micro-exon, as identified using GeneSeqer." 10 4 21 9 At5g08710 regulator of chromosome condensation (RCC1) family protein / UVB-resistance protein-related contains Pfam PF00415 : Regulator of chromosome condensation (RCC1); similar to UVB-resistance protein UVR8 (GI:10177674) {Arabidopsis thaliana} 10 4 21 10 At5g08780 "histone H1/H5 family protein contains Pfam domain, PF00538: linker histone H1 and H5 family" 10 4 21 11 At5g09300 "2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative similar to branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Gallus gallus] GI:12964598; contains Pfam profile PF00676: Dehydrogenase E1 component" 10 4 21 12 At5g09350 "phosphatidylinositol 4-kinase, putative strong similarity to gi:4467359" 10 4 21 13 At5g12100 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 10 4 21 14 At5g12160 expressed protein similar to unknown protein (pir||T09909) 10 4 21 15 At5g12330 lateral root primordium 1 (LRP1) identical to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 10 4 21 16 At5g12360 expressed protein ; expression supported by MPSS 10 4 21 17 At5g12880 proline-rich family protein similar to hydroxyproline-rich glycoprotein gi|169345|gb|AAA33763 10 4 21 18 At5g12940 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 10 4 21 19 At5g13130 hypothetical protein low similarity to microrchidia [Mus musculus] GI:5410255 10 4 21 20 At5g13190 expressed protein 10 4 21 21 At5g15910 dehydrogenase-related low similarity to SP|Q9R1J0 NAD(P)-dependent steroid dehydrogenase (EC 1.1.1.-) {Mus musculus} 10 4 21 22 At5g15970 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) identical to SP|P31169 Stress-induced KIN2 protein (Cold-induced COR6.6 protein) {Arabidopsis thaliana} 10 4 21 23 At5g16150 "hexose transporter, putative strong similarity to hexose transporter [Arabidopsis thaliana] GI:8347250; contains Pfam profile PF00083: major facilitator superfamily protein" 10 4 21 24 At5g16210 HEAT repeat-containing protein contains Pfam profile PF02985: HEAT repeat 10 4 21 25 At5g16350 expressed protein 10 4 22 1 At5g16390 biotin carboxyl carrier protein 1 (BCCP1) identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor [Arabidopsis thaliana] gi|9759121|dbj|BAB09606 10 4 22 2 At5g16560 myb family transcription factor (KAN1) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA GARP-like putative transcription factor KANADI1 (KAN1) GI:15723590 10 4 22 3 At5g16610 expressed protein 10 4 22 4 At5g19190 "expressed protein predicted protein, Arabidopsis thaliana" 10 4 22 5 At5g19230 expressed protein 10 4 22 6 At5g19390 "pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein weak similarity to rho-GTPase activating protein [Homo sapiens] GI:14245732; contains Pfam profiles PF00169: PH domain, PF00620: RhoGAP domain" 10 4 22 7 At5g19440 "cinnamyl-alcohol dehydrogenase, putative (CAD) similar to cinnamyl-alcohol dehydrogenase, Eucalyptus gunnii [GI:1143445], apple tree, PIR:T16995" 10 4 22 8 At5g19610 sec7 domain-containing protein similar to SP|Q42510 Pattern formation protein EMB30 (GNOM) {Arabidopsis thaliana}; contains Pfam profile PF01369: Sec7 domain 10 4 22 9 At5g19670 "exostosin family protein contains Pfam domain, PF03016: Exostosin family" 10 4 22 10 At5g19850 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Terrabacter sp. DBF63] GI:14196240; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 4 22 11 At5g19890 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|1403134|emb|CAA67092" 10 4 22 12 At5g23210 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 10 4 22 13 At5g23260 "MADS-box protein, putative " 10 4 22 14 At5g23405 high mobility group (HMG1/2) family protein contains Pfam profile PF00505: HMG (high mobility group) box 10 4 22 15 At5g23430 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] 10 4 22 16 At5g23610 expressed protein 10 4 22 17 At5g23680 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 10 4 22 18 At5g23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 10 4 22 19 At5g23870 pectinacetylesterase family protein contains Pfam profile: PF03283 pectinacetylesterase 10 4 22 20 At5g26620 hypothetical protein 10 4 22 21 At5g26600 expressed protein weak similarity to SP|P18549 Isopenicillin N epimerase (EC 5.-.- ) {Streptomyces clavuligerus} 10 4 22 22 At5g26880 "tRNA/rRNA methyltransferase (SpoU) family protein low similarity to tRNA (Gm18) methyltransferase [Thermus thermophilus] GI:11079208; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 10 4 22 23 At5g26940 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 10 4 22 24 At5g27130 "MADS-box family protein various predicted MADS box proteins, Arabidopsis thaliana" 10 4 22 25 At5g27200 "acyl carrier protein, chloroplast, putative / ACP, putative similar to Acyl carrier protein, chloroplast precursor (ACP) from {Arabidopsis thaliana} SP|P11829, {Brassica napus} SP|P17650; contains InterPro accession IPR003881: Isochorismatase" 10 4 23 1 At5g27390 "expressed protein CG6949 - Drosophila melanogaster, EMBL:AE003739" 10 4 23 2 At5g27450 mevalonate kinase (MK) identical to mevalonate kinase [Arabidopsis thaliana] SWISS-PROT:P46086 10 4 23 3 At5g35510 hypothetical protein 10 4 23 4 At5g35560 DENN (AEX-3) domain-containing protein contains Pfam domain PF02141: DENN (AEX-3) domain; this cDNA may contain an anomalously spliced intron...will require further examination. 10 4 23 5 At5g35680 "eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative strong similarity to translation initiation factor (eIF-1A) [Beta vulgaris] GI:17977975; contains Pfam profile PF01176: Eukaryotic initiation factor 1A" 10 4 23 6 At5g35732 expressed protein 10 4 23 7 At5g35890 hypothetical protein 10 4 23 8 At5g35940 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 10 4 23 9 At5g36100 hypothetical protein similar to unknown protein (gb|AAD26867.1) 10 4 23 10 At5g36160 aminotransferase-related similar to nicotianamine aminotransferase B GI:6469087 from [Hordeum vulgare subsp. vulgare] 10 4 23 11 At5g39370 "S-locus glycoprotein, putative similar to S glycoprotein [Raphanus sativus] (SLG(S8)) GI:3327852; contains Pfam profile PF01453: Lectin (probable mannose binding)" 10 4 23 12 At5g39430 hypothetical protein 10 4 23 13 At5g39610 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 10 4 23 14 At5g39670 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 10 4 23 15 At5g39840 "ATP-dependent RNA helicase, mitochondrial, putative similar to mitochondrial RNA helicase [Arabidopsis thaliana] GI:5823579; contains Pfam profile PF00271: Helicase conserved C-terminal domain" 10 4 23 16 At5g39890 expressed protein 10 4 23 17 At5g40070 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 10 4 23 18 At5g40140 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 10 4 23 19 At5g42870 "lipin family protein contains Pfam profile: PF04571 lipin, N-terminal conserved region" 10 4 23 20 At5g42905 hypothetical protein 10 4 23 21 At5g43040 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 4 23 22 At5g43100 "aspartyl protease family protein low similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 10 4 23 23 At5g43260 chaperone protein dnaJ-related similar to Chaperone protein dnaJ (SP:Q9WZV3) [Thermotoga maritima] 10 4 23 24 At5g43320 "casein kinase, putative similar to casein kinase I (CKI2) [Arabidopsis thaliana] gi|1103322|emb|CAA55397; contains protein kinase domain, Pfam:PF00069" 10 4 23 25 At5g43470 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to RPP8" 10 4 24 1 At5g43520 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 10 4 24 2 At5g46110 "phosphate/triose-phosphate translocator, putative identical to phosphate/triose-phosphate translocator precursor [Arabidopsis thaliana] gi|3983125|gb|AAC83815; similar to triose phosphate/phosphate translocator, chloroplast precursor (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177" 10 4 24 3 At5g46150 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:835763; GI:4966357; GI:4585976; GI:11994416 from [Arabidopsis thaliana] 10 4 24 4 At5g46270 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 10 4 24 5 At5g46320 hypothetical protein 10 4 24 6 At5g46470 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 10 4 24 7 At5g46530 AWPM-19-like membrane family protein similar to ABA induced plasma membrane protein PM 19 [Triticum aestivum] GI:1724112; contains Pfam profile PF05512: AWPM-19-like family 10 4 24 8 At5g46690 basic helix-loop-helix (bHLH) family protein contains similarity to bHLH DNA-binding protein 10 4 24 9 At5g46750 human Rev interacting-like family protein / hRIP family protein contains Pfam profile PF01412: Putative GTP-ase activating protein for Arf 10 4 24 10 At5g49380 "hypothetical protein contains Pfam domain, PF04802: Protein of unknown function (DUF625)" 10 4 24 11 At5g49440 expressed protein 10 4 24 12 At5g49580 DNAJ heat shock N-terminal domain-containing protein contains similarity to S-locus protein 5 GI:6069485 from [Brassica rapa]; contains Pfam profile PF00226 DnaJ domain 10 4 24 13 At5g49640 expressed protein 10 4 24 14 At5g49770 "leucine-rich repeat transmembrane protein kinase, putative " 10 4 24 15 At5g49830 expressed protein 10 4 24 16 At5g49990 xanthine/uracil permease family protein similar to permease 1 [Zea mays] GI:7844006; contains Pfam profile: PF00860 Xanthine/uracil permeases family 10 4 24 17 At5g50050 invertase/pectin methylesterase inhibitor family protein low similarity to pollen-specific protein Bnm1 [Brassica napus] GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 10 4 24 18 At5g52800 expressed protein ; expression supported by MPSS 10 4 24 19 At5g52860 ABC transporter family protein 10 4 24 20 At5g53020 expressed protein 10 4 24 21 At5g53050 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 10 4 24 22 At5g53220 expressed protein ; expression supported by MPSS 10 4 24 23 At5g53280 expressed protein 10 4 24 24 At5g53450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 10 4 24 25 At5g53500 "WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]" 10 4 25 1 At5g56180 "actin-related protein, putative (ARP8) strong similarity to actin-related protein 8A (ARP8) [Arabidopsis thaliana] GI:21427473; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427470|gb|AF507916.1|" 10 4 25 2 At5g56220 expressed protein 10 4 25 3 At5g56380 F-box family protein similar to unknown protein (emb|CAB62440.1); contains Pfam profile PF00646: F-box domain 10 4 25 4 At5g56440 F-box family protein contains F-box domain Pfam:PF00646 10 4 25 5 At5g56620 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 10 4 25 6 At5g56680 "asparaginyl-tRNA synthetase 1, cytoplasmic / asparagine-tRNA ligase 1 (SYNC1) identical to SP|Q9SW96" 10 4 25 7 At5g56860 zinc finger (GATA type) family protein similar to unknown protein (pir |T04270) 10 4 25 8 At5g56910 expressed protein 10 4 25 9 At5g59430 telomere repeat-binding protein 1 (TRP1) identical to telomere repeat-binding protein TRP1 [Arabidopsis thaliana] GI:5459298 10 4 25 10 At5g59480 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 10 4 25 11 At5g59650 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 4 25 12 At5g59710 transcription regulator NOT2/NOT3/NOT5 family protein contains Pfam domain PF04153: NOT2 / NOT3 / NOT5 family 10 4 25 13 At5g59860 RNA recognition motif (RRM)-containing protein similar to SP|Q14011 Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) {Homo sapiens}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 10 4 25 14 At5g59890 actin-depolymerizing factor 4 (ADF4) identical to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana} 10 4 25 15 At5g60040 "DNA-directed RNA polymerase, putative similar to SP|P04051 DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains InterPro accession IPR000722: RNA polymerase, alpha subunit" 10 4 25 16 At5g60100 pseudo-response regulator 3 (APRR3) identical to pseudo-response regulator 3 GI:10281008 from [Arabidopsis thaliana] 10 4 25 17 At5g62760 "nuclear protein ZAP-related similar to nuclear protein ZAP, Mus musculus, EMBL:AB033168 this cDNA provides a truncated ORF likely due to a skipped exon. An alternative ORF is provided." 10 4 25 18 At5g62820 "integral membrane protein, putative MtN24, Medicago truncatula, EMBL:MTY15290; contains Pfam PF04535 : Domain of unknown function (DUF588); contains 4 transmembrane domains ; similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 10 4 25 19 At5g62990 hypothetical protein 10 4 25 20 At5g63040 expressed protein similar to unknown protein (emb|CAB81845.1) 10 4 25 21 At5g63160 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 10 4 25 22 At5g63230 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 10 4 25 23 At5g63420 metallo-beta-lactamase family protein 10 4 25 24 At5g63460 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 10 4 25 25 At5g66005 Expressed protein 10 4 26 1 At5g66030 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| 10 4 26 2 At5g66120 "3-dehydroquinate synthase, putative similar to aroB [Neisseria gonorrhoeae][GI:2661441]; contains 3-dehydroquinate synthase domain PF01761" 10 4 26 3 At5g66170 senescence-associated family protein contains similarity to ketoconazole resistant protein GI:928938 and senescence-associated protein GI:1046268 from [Arabidopsis thaliana] 10 4 26 4 At5g66300 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 10 4 26 5 At5g66340 hypothetical protein 10 4 26 6 At5g66500 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 10 4 26 7 At5g66560 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 10 4 26 8 3xSSC 3xSSC 10 4 26 9 3xSSC 3xSSC 10 4 26 10 3xSSC 3xSSC 10 4 26 11 3xSSC 3xSSC 10 4 26 12 3xSSC 3xSSC 10 4 26 13 3xSSC 3xSSC 10 4 26 14 3xSSC 3xSSC 10 4 26 15 3xSSC 3xSSC 10 4 26 16 At3g45690 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 10 4 26 17 At3g45750 expressed protein 10 4 26 18 At3g45910 hypothetical protein 10 4 26 19 At3g45970 "expansin family protein (EXPL1) similar to cim1 induced allergen, Glycine max, EMBL:U03860; expansin-like gene, PMID:11641069, www.bio.psu.edu/expansins" 10 4 26 20 At3g46150 hypothetical protein 10 4 26 21 At3g46210 "3' exoribonuclease family domain 1-containing protein similar to SP|Q9NQT4 Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal RNA processing protein 46) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 10 4 26 22 At3g46400 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 10 4 26 23 At3g46460 ubiquitin-conjugating enzyme 13 (UBC13) E2; identical to gi:992706 10 4 26 24 Blank Blank 10 4 26 25 Blank Blank 11 1 1 1 3xSSC 3xSSC 11 1 1 2 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 11 1 1 3 atc12 Randomly generated negative control 11 1 1 4 Alien6 Control: Stratagene Spotreport Alien Oligo 11 1 1 5 atc02 Randomly generated negative control 11 1 1 6 atc08 Randomly generated negative control 11 1 1 7 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 11 1 1 8 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 11 1 1 9 3xSSC 3xSSC 11 1 1 10 At1g01960 guanine nucleotide exchange family protein similar to guanine nucleotide exchange factor [Homo sapiens] GI:5456754; contains Pfam profile PF01369: Sec7 domain 11 1 1 11 At1g02090 "COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii [Arabidopsis thaliana] GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced" 11 1 1 12 At1g02100 leucine carboxyl methyltransferase family protein contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} 11 1 1 13 At1g02260 "transmembrane protein, putative similar to P protein (Melanocyte-specific transporter protein) (SP:Q04671) {Homo sapiens}; contains 8 transmembrane domains" 11 1 1 14 At1g02310 "glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase precursor GI:9836826 from [Lycopersicon esculentum]" 11 1 1 15 At1g02475 expressed protein 11 1 1 16 At1g02540 hypothetical protein 11 1 1 17 3xSSC 3xSSC 11 1 1 18 At1g05205 expressed protein 11 1 1 19 At1g05370 expressed protein 11 1 1 20 At1g05430 expressed protein 11 1 1 21 At1g05577 hypothetical protein 11 1 1 22 At1g05620 "inosine-uridine preferring nucleoside hydrolase family protein similar to Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania MajorGI:8569431; contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase" 11 1 1 23 At1g05780 hypothetical protein 11 1 1 24 At1g05805 basic helix-loop-helix (bHLH) family protein 11 1 1 25 3xSSC 3xSSC 11 1 2 1 At1g08350 endomembrane protein 70 family protein KNOLLE; similar to putative endosomal protein GB:AAD20090 GI:4406780 from [Arabidopsis thaliana] 11 1 2 2 At1g08520 "magnesium-chelatase subunit chlD, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLD) similar to Mg-chelatase SP|O24133 from Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum sativum]" 11 1 2 3 At1g08580 expressed protein 11 1 2 4 At1g08730 myosin heavy chain (PCR43) identical to myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis thaliana]; similar to ESTs gb|R30087 and gb|AA394762 11 1 2 5 At1g08760 "expressed protein similar to At1g21030, At5g44890, At2g29240, At1g08740; similar to EST gb|N96641" 11 1 2 6 At1g08920 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 11 1 2 7 At1g08980 amidase family protein similar to component of chloroplast outer membrane translocon Toc64 [Pisum sativum] GI:7453538; contains Pfam profile PF01425: Amidase; supporting cDNA gi|11493701|gb|AF202077.1|AF202077 11 1 2 8 3xSSC 3xSSC 11 1 2 9 At1g11630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 2 10 At1g11780 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to alkB proteins from Homo sapiens [SP|Q13686], Caulobacter crescentus [GI:2055386]; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 11 1 2 11 At1g11840 "lactoylglutathione lyase, putative / glyoxalase I, putative highly similar to putative lactoylglutathione lyase SP:Q39366 from [Brassica oleracea]" 11 1 2 12 At1g11940 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 11 1 2 13 At1g12000 "pyrophosphate--fructose-6-phosphate 1-phosphotransferase beta subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative strong similarity to SP|Q41141 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit (EC 2.7.1.90) (PFP) ((PPI-PFK) {Ricinus communis}; contains Pfam profile PF00365: Phosphofructokinase" 11 1 2 14 At1g12160 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase FMO2 from Homo sapiens [SP|Q99518]; contains Pfam profile PF00743 Flavin-binding monooxygenase-like 11 1 2 15 At1g12220 "disease resistance protein RPS5 (CC-NBS-LRR class) / resistance to Pseudomonas syringae protein 5 (CC-NBS-LRR class) domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Identical to RPS5 (resistance to Pseudomonas syringae protein 5)(gi:3309620)" 11 1 2 16 3xSSC 3xSSC 11 1 2 17 At1g15030 expressed protein 11 1 2 18 At1g15180 MATE efflux family protein contains Pfam profile PF01554: Uncharacterized membrane protein family 11 1 2 19 At1g15215 expressed protein 11 1 2 20 At1g15360 AP2 domain-containing transcription factor family protein Similar to SP|P16146 PPLZ02 protein {Lupinus polyphyllus}; contains an PF|00847 AP2 domain. EST gb|AA728476 comes from this gene 11 1 2 21 At1g15400 expressed protein ESTs gb|H37295 and gb|R64895 come from this gene 11 1 2 22 At1g15550 gibberellin 3-beta-dioxygenase / gibberellin 3 beta-hydroxylase (GA4) identical to gibberellin 3 beta-hydroxylase [GI:2160454] 11 1 2 23 At1g15620 expressed protein ; expression supported by MPSS 11 1 2 24 3xSSC 3xSSC 11 1 2 25 At1g18470 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 11 1 3 1 At1g18630 "glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from {Sorghum bicolor} SP|Q99070, GI:1778373 from [Pisum sativum]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 11 1 3 2 At1g18680 HNH endonuclease domain-containing protein contains Pfam domain PF01844: HNH endonuclease 11 1 3 3 At1g18870 "isochorismate synthase, putative / isochorismate mutase, putative similar to GI:17223087" 11 1 3 4 At1g18940 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 11 1 3 5 At1g19070 F-box family protein similar to putative non-LTR retroelement reverse transcriptase GI:3738337 from [Arabidopsis thaliana] ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 11 1 3 6 At1g19130 expressed protein 11 1 3 7 3xSSC 3xSSC 11 1 3 8 At1g22080 hypothetical protein 11 1 3 9 At1g22240 pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806 pumilio-family RNA binding domain 11 1 3 10 At1g22280 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GI:4336436 from [Lotus japonicus]" 11 1 3 11 At1g22410 "2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative similar to 3-deoxy-D-arabino-heptulosonate 7-phosphate GI:170224 from [Nicotiana tabacum], SP|P21357 from Solanum tuberosum; contains Pfam Class-II DAHP synthetase family domain PF01474" 11 1 3 12 At1g22470 expressed protein 11 1 3 13 At1g22650 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 11 1 3 14 At1g22700 "tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain; ESTs gb|T43026, gb|R64902, gb|Z18169 and gb|N37374 come from this gene" 11 1 3 15 3xSSC 3xSSC 11 1 3 16 At1g26300 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 11 1 3 17 At1g26470 expressed protein 11 1 3 18 At1g26540 agenet domain-containing protein contains Pfam PF05641: Agenet domain 11 1 3 19 At1g26690 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 11 1 3 20 At1g26750 expressed protein 11 1 3 21 At1g26890 hypothetical protein 11 1 3 22 At1g26945 expressed protein supported by full length cDNA gi:26453215 from [Arabidopsis thaliana] 11 1 3 23 3xSSC 3xSSC 11 1 3 24 At1g29910 "chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2A) identical to SP|P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana}" 11 1 3 25 At1g30060 "COP1-interacting protein-related similar to COP1-interacting protein 4.1 (CIP4.1) [Arabidopsis thaliana] GI:13160650, COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646" 11 1 4 1 At1g30120 "pyruvate dehydrogenase E1 component beta subunit, chloroplast identical to pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana] GI:2454184; identical to cDNA pyruvate dehydrogenase E1 beta subunit mRNA, nuclear gene encoding plastid protein GI:2454183" 11 1 4 2 At1g30290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 4 3 At1g30370 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile: PF01764: Lipase 11 1 4 4 At1g30520 acyl-activating enzyme 14 (AAE14) identical to acyl-activating enzyme 14 [Arabidopsis thaliana]; similar to SP|Q42524 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}; contains Pfam profile PF00501: AMP-binding enzyme; identical to cDNA acyl-activating enzyme 14 (At1g30520) GI:29893263 11 1 4 5 At1g30580 expressed protein 11 1 4 6 3xSSC 3xSSC 11 1 4 7 At1g33640 hypothetical protein contains similarity to epidermal growth factor receptor-like protein GB:AAB31972 GI:9256501 from (Xiphophorus maculatus) 11 1 4 8 At1g33840 hypothetical protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 11 1 4 9 At1g33900 "avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family" 11 1 4 10 At1g34060 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 11 1 4 11 At1g34120 inositol polyphosphate 5-phosphatase I (IP5PI) nearly identical to inositol polyphosphate 5-phosphatase I [Arabidopsis thaliana] GI:10444261 11 1 4 12 At1g34315 expressed protein 11 1 4 13 At1g34370 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 1 4 14 3xSSC 3xSSC 11 1 4 15 At1g44575 "photosystem II 22kDa protein, chloroplast / CP22 (PSBS) identical to photosystem II 22 kDa protein, chloroplast [precursor] SP:Q9XF91 from [Arabidopsis thaliana]; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 11 1 4 16 At1g44850 hypothetical protein 11 1 4 17 At1g44900 "DNA replication licensing factor, putative similar to DNA replication licensing factor MCM2 from {Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens}; contains Pfam profile PF00493: MCM2/3/5 family" 11 1 4 18 At1g45150 expressed protein 11 1 4 19 At1g45191 "glycosyl hydrolase family 1 protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 11 1 4 20 At1g46264 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 11 1 4 21 At1g46840 F-box family protein contains F-box domain Pfam:PF00646; contains 1 predicted transmembrane domain; similar to Probable disease resistance RPP8-like protein 2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana] 11 1 4 22 3xSSC 3xSSC 11 1 4 23 At1g50090 aminotransferase class IV family protein contains Pfam profile: PF01063 aminotransferase class IV 11 1 4 24 At1g50310 monosaccharide transporter (STP9) identical to monosaccharide transporter STP9 protein [Arabidopsis thaliana] GI:15487254; contains Pfam profile PF00083: major facilitator superfamily protein 11 1 4 25 At1g50380 "prolyl oligopeptidase family protein similar to oligopeptidase B [Leishmania major] GI:4581757; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF02897: Prolyl oligopeptidase, N-terminal beta-propeller domain" 11 1 5 1 At1g50575 lysine decarboxylase family protein contains Pfam profile PF03641: lysine decarboxylase family 11 1 5 2 At1g50630 expressed protein 11 1 5 3 At1g50820 hypothetical protein 11 1 5 4 At1g50900 expressed protein 11 1 5 5 3xSSC 3xSSC 11 1 5 6 At1g53620 glycine-rich protein 11 1 5 7 At1g53785 expressed protein 11 1 5 8 At1g53840 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 1 5 9 At1g54010 "myrosinase-associated protein, putative similar to myrosinase-associated protein GI:1769969 from [Brassica napus]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 11 1 5 10 At1g54040 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (4 repeats); similar to jsimilar to epithiospecifier (GI:16118838) [Arabidopsis thaliana] isioform contains AT-AG splice sites at intron 11 1 5 11 At1g54180 expressed protein 11 1 5 12 At1g54220 "dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase GI:5669871 [Zea mays]; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain" 11 1 5 13 3xSSC 3xSSC 11 1 5 14 At1g57800 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 11 1 5 15 At1g58110 bZIP family transcription factor similar to bZIP transcriptional activator RSG GI:8777512 from [Nicotiana tabacum]; contains PFAM profile: bZIP transcription factor PF00170 11 1 5 16 At1g58190 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 11 1 5 17 At1g58310 F-box family protein contains F-box domain Pfam:PF00646 11 1 5 18 At1g58370 "glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein similar to (1,4)-beta-xylan endohydrolase GI:5306060 from [Triticum aestivum] ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain" 11 1 5 19 At1g58807 "disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative similar to disease resistance protein rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631; identical to cDNA RF45 mRNA for PRM1 homolog, partial cds GI:6520196" 11 1 5 20 At1g59218 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 11 1 5 21 3xSSC 3xSSC 11 1 5 22 At1g62410 MIF4G domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profile PF02854: MIF4G domain 11 1 5 23 At1g62610 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 11 1 5 24 At1g62670 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR repeats Pfam Profile: PF01535 11 1 5 25 At1g62810 "copper amine oxidase, putative similar to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855" 11 1 6 1 At1g62860 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 11 1 6 2 At1g63020 "DNA-directed RNA polymerase alpha subunit family protein low similarity to RNA polymerase IIA largest subunit [Trypanosoma brucei] GI:162215; contains InterPro accession IPR000722: RNA polymerase, alpha subunit" 11 1 6 3 At1g63080 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 6 4 3xSSC 3xSSC 11 1 6 5 At1g65845 expressed protein [Arabidopsis thaliana] 11 1 6 6 At1g66030 cytochrome P450-related weak similarity to cytochrome P450 [Catharanthus roseus] GI:4688670 11 1 6 7 At1g66080 expressed protein 11 1 6 8 At1g66230 myb family transcription factor (MYB20) similar to myb-related transcription factor GI:1430846 from [Lycopersicon esculentum]; contains PFAM profile: Myb DNA binding domain PF00249 11 1 6 9 At1g66280 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis thaliana] 11 1 6 10 At1g66450 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 1 6 11 At1g66510 AAR2 protein family contains Pfam profile PF05282: AAR2 protein 11 1 6 12 3xSSC 3xSSC 11 1 6 13 At1g69250 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)" 11 1 6 14 At1g69390 "chloroplast division protein, putative (MinE1) identical to chloroplast division protein homolog MinE1 GI:17511220 from [Arabidopsis thaliana]" 11 1 6 15 At1g69430 hypothetical protein 11 1 6 16 At1g69545 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeat domains; similar to disease resistance protein RPP1-WsA (GI:3860163)[Arabidopsis thaliana] 11 1 6 17 At1g69610 expressed protein 11 1 6 18 At1g69790 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] SWISS-PROT:Q06548" 11 1 6 19 At1g69850 nitrate transporter (NTL1) identical to nitrate transporter (NTL1) GI:3377517 [Arabidopsis thaliana] 11 1 6 20 3xSSC 3xSSC 11 1 6 21 At1g72710 "casein kinase, putative similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158" 11 1 6 22 At1g72880 "acid phosphatase survival protein SurE, putative similar to Swiss-Prot:P36664 acid phosphatase surE (EC 3.1.3.2) (Stationary-phase survival protein surE) [Escherichia coli O157:H7]; contains Pfam domain PF01975: Survival protein SurE" 11 1 6 23 At1g72940 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 11 1 6 24 At1g73130 expressed protein 11 1 6 25 At1g73177 expressed protein 11 1 7 1 At1g73325 trypsin and protease inhibitor family protein / Kunitz family protein similar to Dr4 [Arabidopsis thaliana] GI:469114; contains Pfam profile PF00197: Trypsin and protease inhibitor 11 1 7 2 At1g73380 expressed protein 11 1 7 3 AT5G57480 PC-1 A02 11 1 7 4 3XSSC PC-1 A14 11 1 7 5 AT1G29930 PC-1 E02 11 1 7 6 3XSSC PC-1 E14 11 1 7 7 AT3G44150 PC-1 I02 11 1 7 8 3XSSC PC-1 I14 11 1 7 9 AT4G00810 PC-1 M02 11 1 7 10 3XSSC PC-1 M14 11 1 7 11 3xSSC 3xSSC 11 1 7 12 At1g76270 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as ' auxin-independent growth promoter -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 11 1 7 13 At1g76420 "no apical meristem (NAM) family protein N-term similar to N-term of NAM GB:CAA63101 [Petunia x hybrida] (apical meristem formation), CUC2 GB:BAA19529 [Arabidopsis thaliana], GRAB2 protein GB:CAA09372 [Triticum sp.]" 11 1 7 14 At1g76460 "RNA recognition motif (RRM)-containing protein low similarity to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 11 1 7 15 At1g76620 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 11 1 7 16 At1g76690 12-oxophytodienoate reductase (OPR2) identical to 12-oxophytodienoate reductase OPR2 GB:AAC78441 [Arabidopsis thaliana] 11 1 7 17 At1g76840 hypothetical protein 11 1 7 18 At1g76890 "trihelix DNA-binding protein / GT-2 factor (GT2) identical to GT2 factor [Arabidopsis thaliana] GI:416490, GI:2664202 (DNA binding factor GT-2 from Arabidopsis)" 11 1 7 19 3xSSC 3xSSC 11 1 7 20 At1g79570 protein kinase family protein low similarity to EDR1 [Arabidopsis thaliana] GI:11127925 11 1 7 21 At1g79700 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana]" 11 1 7 22 At1g79760 expressed protein 11 1 7 23 At1g79880 La domain-containing protein contains Pfam profile PF05383: La domain; similar to putative protein GB:CAA18589 [Arabidopsis thaliana] 11 1 7 24 At1g79920 "heat shock protein 70, putative / HSP70, putative contains Pfam profile: PF00012 Heat shock hsp70 proteins; similar to heat-shock proteins GB:CAA94389, GB:AAD55461 [Arabidopsis thaliana]" 11 1 7 25 At1g80060 expressed protein 11 1 8 1 At1g80120 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 11 1 8 2 3xSSC 3xSSC 11 1 8 3 At2g03020 "heat shock protein-related Prosite PS00430: TonB-dependent receptor proteins signature 1; contains some similar to Small heat shock protein, chloroplast precursor (SP:P30222) {Petunia hybrida}" 11 1 8 4 At2g03210 "xyloglucan fucosyltransferase, putative (FUT2) identical to SP|O81053 Probable fucosyltransferase 2 (EC 2.4.1.-) (AtFUT2) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from [Arabidopsis thaliana]" 11 1 8 5 At2g03270 "DNA-binding protein, putative similar to Swiss-Prot:Q60560 DNA-binding protein SMUBP-2 (Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin II gene enhancer-binding protein)(RIPE3B-binding complex 3B2 P110 subunit) (RIP-1)[Mesocricetus auratus]; identical to putative helicase (atpc-2 gene) cDNA NCBI_gi:11191230" 11 1 8 6 At2g03460 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 11 1 8 7 At2g03510 band 7 family protein contains Pfam profile PF01145: SPFH domain / Band 7 family 11 1 8 8 At2g03710 MADS-box protein (AGL3) 11 1 8 9 At2g03760 "steroid sulfotransferase, putative strong similarity to steroid sulfotransferases from [Brassica napus] GI:3420008, GI:3420004, GI:3420006; contains Pfam profile PF00685: Sulfotransferase domain" 11 1 8 10 3xSSC 3xSSC 11 1 8 11 At2g07707 hypothetical protein contains Pfam profile PF02326: YMF19 hypothetical plant mitochondrial protein 11 1 8 12 At2g07741 "ATPase subunit 6, putative similar to ATPase subunit 6 GI:515963 from [Raphanus sativus]; contains Pfam profile: PF00119 ATP synthase, A subunit" 11 1 8 13 At2g07760 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 11 1 8 14 At2g10105 hypothetical protein 11 1 8 15 At2g10360 hypothetical protein 11 1 8 16 At2g10920 hypothetical protein 11 1 8 17 At2g10970 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 11 1 8 18 3xSSC 3xSSC 11 1 8 19 At2g16230 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 11 1 8 20 At2g16440 "DNA replication licensing factor, putative similar to SP|P49717 DNA replication licensing factor MCM4 (CDC21 homolog) {Mus musculus}, SP|P29458 Cdc21 protein {Schizosaccharomyces pombe}; contains Pfam profile PF00493: MCM2/3/5 family" 11 1 8 21 At2g16480 "SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein contains Pfam profiles PF02201: BAF60b domain of the SWIB complex, PF03126: Plus-3 domain" 11 1 8 22 At2g16660 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 11 1 8 23 At2g16740 "ubiquitin-conjugating enzyme, putative strong similarity to SP|P35133 Ubiquitin-conjugating enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 11 1 8 24 At2g16910 basic helix-loop-helix (bHLH) family protein 11 1 8 25 At2g16950 importin beta-2 subunit family protein similar to SP|Q92973 Importin beta-2 subunit (Transportin) {Homo sapiens}; contains Pfam profile PF03810: Importin-beta N-terminal domain 11 1 9 1 3xSSC 3xSSC 11 1 9 2 At2g19810 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 11 1 9 3 At2g19980 allergen V5/Tpx-1-related family protein low similarity to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein 11 1 9 4 At2g20040 "protein kinase, putative similar to protein kinase [Homo sapiens] gi|1052737|emb|CAA59733" 11 1 9 5 At2g20190 CLIP-associating protein (CLASP) -related similar to CLIP-associating protein CLASP2 (GI:13508651) [Rattus norvegicus] 11 1 9 6 At2g20270 "glutaredoxin family protein contains glutaredoxin domain, Pfam:PF00462" 11 1 9 7 At2g20450 60S ribosomal protein L14 (RPL14A) 11 1 9 8 At2g20500 expressed protein 11 1 9 9 3xSSC 3xSSC 11 1 9 10 At2g23170 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 11 1 9 11 At2g23340 "AP2 domain-containing transcription factor, putative " 11 1 9 12 At2g23400 "dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative similar to GI:796076; this may be a pseudogene." 11 1 9 13 At2g23570 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393" 11 1 9 14 At2g23630 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase 11 1 9 15 At2g23820 metal-dependent phosphohydrolase HD domain-containing protein contains Pfam profile PF01966: HD domain 11 1 9 16 At2g23900 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 11 1 9 17 3xSSC 3xSSC 11 1 9 18 At2g26800 "hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative similar to SP|P35915 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA lyase) {Gallus gallus}; contains Pfam profile PF00682: HMGL-like" 11 1 9 19 At2g26940 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 1 9 20 At2g26980 CBL-interacting protein kinase 3 (CIPK3) identical to CBL-interacting protein kinase 3 [Arabidopsis thaliana] gi|9280638|gb|AAF86507 11 1 9 21 At2g27110 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282" 11 1 9 22 At2g27170 structural maintenance of chromosomes (SMC) family protein similar to basement membrane-associated chondroitin proteoglycan Bamacan [Rattus norvegicus] GI:1785540; contains Pfam profile PF02463: RecF/RecN/SMC N terminal domain. No suitalble start codon was identified. 11 1 9 23 At2g27315 hypothetical protein 11 1 9 24 At2g27370 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 11 1 9 25 3xSSC 3xSSC 11 1 10 1 At2g30140 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 1 10 2 At2g30320 tRNA pseudouridine synthase family protein similar to pseudouridine synthase [Schizosaccharomyces pombe] GI:6469502; contains Pfam profile PF01416: tRNA pseudouridine synthase 11 1 10 3 At2g30360 CBL-interacting protein kinase 11 (CIPK11) identical to CBL-interacting protein kinase 11 [Arabidopsis thaliana] gi|13249121|gb|AAK16686; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 11 (CIPK11)partial cds GI:13249120 11 1 10 4 At2g30520 signal transducer of phototropic response (RPT2) identical to RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112 11 1 10 5 At2g30570 photosystem II reaction center W (PsbW) protein-related similar to photosystem II reaction center W protein SP:Q41387 from [Spinacia oleracea] 11 1 10 6 At2g30695 expressed protein 11 1 10 7 At2g30750 "cytochrome P450 71A12, putative (CYP71A12) Identical to Cytochrome P450 (SP:O49340) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 11 1 10 8 3xSSC 3xSSC 11 1 10 9 At2g33420 expressed protein 11 1 10 10 At2g33560 spindle checkpoint protein-related similar to spindle checkpoint protein BubR1 (GI:22128593) [Xenopus laevis]; similar to Mitotic checkpoint serine/threonine-protein kinase BUB1 beta (EC 2.7.1.-) (MAD3/BUB1-related protein kinase) (Mitotic checkpoint kinase MAD3L) (Swiss-Prot:Q9Z1S0) [Mus musculus] 11 1 10 11 At2g33610 "SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domain PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain" 11 1 10 12 At2g33750 "purine permease, putative (PUP2) similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profiles PF03151: Domain of unknown function, DUF250, PF00892: Integral membrane protein; identical to cDNA putative purine permease (PUP2) mRNA, partial cds GI:14388590" 11 1 10 13 At2g33790 "pollen Ole e 1 allergen and extensin family protein similar to arabinogalactan protein [Daucus carota] GI:11322245, SP|Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family" 11 1 10 14 At2g33990 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 11 1 10 15 At2g34040 apoptosis inhibitory 5 (API5) family protein contains Pfam domain PF05918 Apoptosis inhibitory protein 5 (API5) 11 1 10 16 3xSSC 3xSSC 11 1 10 17 At2g36680 expressed protein 11 1 10 18 At2g36840 ACT domain-containing protein contains Pfam profile ACT domain PF01842 11 1 10 19 At2g36885 expressed protein 11 1 10 20 At2g37030 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 11 1 10 21 At2g37060 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 11 1 10 22 At2g37210 expressed protein contains Pfam profile PF03641: decarboxylase family protein 11 1 10 23 At2g37270 40S ribosomal protein S5 (RPS5A) identical to GP:3043428 11 1 10 24 3xSSC 3xSSC 11 1 10 25 At2g39930 "isoamylase, putative / starch debranching enzyme, putative similar to isoamylase from [Solanum tuberosum] GI:27728145, [Triticum aestivum] GI:17932898, [Hordeum vulgare] GI:21314275, [Oryza sativa] GI:3252794; contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain" 11 1 11 1 At2g40080 expressed protein 11 1 11 2 At2g40110 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 11 1 11 3 At2g40230 transferase family protein similar to taxadienol acetyl transferase from Taxus cuspidata [gi:6978038]; contains Pfam transferase family domain PF002458 11 1 11 4 At2g40290 "eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative similar to Swiss-Prot:P05198 eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]" 11 1 11 5 At2g40430 expressed protein identical to Protein At2g40430 (Swiss-Prot:O22892) [Arabidopsis thaliana]; similar to Glioma tumor suppressor candidate region gene 2 protein (p60) (Swiss-Prot:Q9NZM5) [Homo sapiens] 11 1 11 6 At2g40475 expressed protein 11 1 11 7 3xSSC 3xSSC 11 1 11 8 At2g43090 aconitase C-terminal domain-containing protein contains Pfam profile PF00694: Aconitase C-terminal domain 11 1 11 9 At2g43230 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 11 1 11 10 At2g43280 far-red impaired responsive family protein / FAR1 family protein weak similarity to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF03101: FAR1 family 11 1 11 11 At2g43470 expressed protein 11 1 11 12 At2g43530 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 11 1 11 13 At2g43680 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 11 1 11 14 At2g43740 hypothetical protein weak similarity to RTM1 (GI:6503088) [Arabidopsis thaliana] 11 1 11 15 3xSSC 3xSSC 11 1 11 16 At2g46430 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC3) identical to cyclic nucleotide and calmodulin-regulated ion channel GI:4581201 from [Arabidopsis thaliana] 11 1 11 17 At2g46570 laccase family protein / diphenol oxidase family protein similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960] 11 1 11 18 At2g46610 "arginine/serine-rich splicing factor, putative similar to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana}" 11 1 11 19 At2g46790 "pseudo-response regulator 9 (APRR9) / timing of CAB expression 1-like protein (TL1) identical to pseudo-response regulator 9 GI:10281000 from [Arabidopsis thaliana], timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA timing of CAB expression 1-like protein GI:9247021" 11 1 11 20 At2g46830 myb-related transcription factor (CCA1) identical to myb-related transcription factor (CCA1) GI:4090569 from [Arabidopsis thaliana] 11 1 11 21 At2g46980 expressed protein 11 1 11 22 At2g47030 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 1 11 23 3xSSC 3xSSC 11 1 11 24 At3g02400 "forkhead-associated domain-containing protein / FHA domain-containing protein / AT hook motif-containing protein contains Pfam profiles PF00498: FHA domain, PF02178: AT hook motif" 11 1 11 25 At3g02550 LOB domain protein 41 / lateral organ boundaries domain protein 41 (LBD41) identical to LOB DOMAIN 41 [Arabidopsis thaliana] GI:17227172 11 1 12 1 At3g02580 delta 7-sterol-C5-desaturase (STE1) identical to sterol-C5-desaturase GB:AAD12944 GI:4234768 from [Arabidopsis thaliana] 11 1 12 2 At3g02760 "histidyl-tRNA synthetase, putative / histidine--tRNA ligase, putative similar to SP|P12081 Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) {Homo sapiens}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain" 11 1 12 3 At3g02820 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 11 1 12 4 At3g02970 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region 11 1 12 5 At3g03030 F-box family protein contains F-box domain Pfam:PF00646 11 1 12 6 3xSSC 3xSSC 11 1 12 7 At3g05680 expressed protein 11 1 12 8 At3g05820 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 11 1 12 9 At3g05880 hydrophobic protein (RCI2A) / low temperature and salt responsive protein (LTI6A) identical to SP|Q9ZNQ7 Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) {Arabidopsis thaliana} 11 1 12 10 At3g06030 "NPK1-related protein kinase, putative (ANP3) similar to protein kinase [Nicotiana tabacum] gi|456309|dbj|BAA05648; identical to cDNA NPK1-related protein kinase 3 GI:2342426" 11 1 12 11 At3g06060 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 11 1 12 12 At3g06190 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain 11 1 12 13 At3g06250 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 11 1 12 14 3xSSC 3xSSC 11 1 12 15 At3g09240 protein kinase-related low similarity to protein kinase GI:166809; contains Pfam profile: Eukaryotic protein kinase domain 11 1 12 16 At3g09410 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase 11 1 12 17 At3g09470 expressed protein 11 1 12 18 At3g09660 minichromosome maintenance family protein / MCM family protein similar to SP|P49717 DNA replication licensing factor MCM4 (CDC21 homolog) {Mus musculus}; contains Pfam profile PF00493: MCM2/3/5 family 11 1 12 19 At3g09720 "DEAD/DEAH box helicase, putative similar to RNA helicase involved in rRNA processing GB:6321267 from [Saccharomyces cerevisiae]c, ontains DEAD and DEAH box domain" 11 1 12 20 At3g09850 D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain 11 1 12 21 At3g09910 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:2723477 from [Arabidopsis thaliana] ;contains Pfam profile: PF00071 Ras family" 11 1 12 22 3xSSC 3xSSC 11 1 12 23 At3g12340 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative contains Pfam profile: PF00254, FKBP-type peptidyl-prolyl cis-trans isomerases" 11 1 12 24 At3g12510 expressed protein 11 1 12 25 At3g12560 "telomeric DNA-binding protein, putative similar to telomeric DNA-binding protein 1 [Arabidopsis thaliana] gi|13641340|gb|AAK31590" 11 1 13 1 At3g12720 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 11 1 13 2 At3g12775 ubiquitin-conjugating enzyme family protein contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 11 1 13 3 At3g12955 auxin-responsive protein-related similar to indole-3-acetic acid induced protein arg7 (SP:P32295) [Vigna radiata] 11 1 13 4 At3g13010 "hAT dimerisation domain-containing protein contains Pfam profile PF04937: Protein of unknown function (DUF 659), weak hit to PF05699: hAT family dimerisation domain" 11 1 13 5 3xSSC 3xSSC 11 1 13 6 At3g15357 expressed protein 11 1 13 7 At3g15510 no apical meristem (NAM) family protein (NAC2) identical to AtNAC2 [Arabidopsis thaliana] GI:12060426; contains Pfam PF02365: No apical meristem (NAM) domain; similar to jasmonic acid 2 GB:AAF04915 from [Lycopersicon esculentum] 11 1 13 8 At3g15560 expressed protein 11 1 13 9 At3g15710 "signal peptidase, putative similar to SP|P13679 Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-) {Canis familiaris}; contains Pfam profile: PF00461 signal peptidase I" 11 1 13 10 At3g15770 expressed protein This may be a pseudogene. A stop codon is found directly after the presumed correct start codon. The longest ORF is provided here. 11 1 13 11 At3g15930 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 13 12 At3g15980 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]" 11 1 13 13 3xSSC 3xSSC 11 1 13 14 At3g18690 VQ motif-containing protein contains PF05678: VQ motif 11 1 13 15 At3g18840 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 13 16 At3g18880 ribosomal protein S17 family protein similar to 40S ribosomal protein S17 GB:Y08858 from [Nicotiana plumbaginifolia] 11 1 13 17 At3g19040 "ubiquitin family protein / DNA-binding bromodomain-containing protein low similarity to SP|P51123 Transcription initiation factor TFIID 230 kDa subunit {Drosophila melanogaster}; contains Pfam profiles: PF00439 bromodomain, PF00240: Ubiquitin family" 11 1 13 18 At3g19090 "RNA-binding protein, putative similar to RNA-binding protein homolog GB:AAF00075 GI:6449448 from [Brassica napus]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 11 1 13 19 At3g19260 longevity-assurance (LAG1) family protein similar to Alternaria stem canker resistance protein (ASC1) [Lycopersicon esculentum] GI:7688742; contains Pfam profile PF03798: Longevity-assurance protein (LAG1) 11 1 13 20 At3g19320 "leucine-rich repeat family protein contains leucine-rich repeats, Pfam:PF00560;" 11 1 13 21 3xSSC 3xSSC 11 1 13 22 At3g22070 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 1 13 23 At3g22240 expressed protein 11 1 13 24 At3g22290 expressed protein 11 1 13 25 At3g22425 imidazoleglycerol-phosphate dehydratase 1 (IGPD1) identical to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; supporting cDNA gi|437212|gb|U02689.1|ATU02689 11 1 14 1 At3g22470 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repea 11 1 14 2 At3g22640 "cupin family protein contains similarity to vicilin-like protein precursor [Juglans regia] GI:6580762, vicilin precursor [Theobroma cacao] PIR|S22477, vicilin precursor [Macadamia integrifolia] GI:5852872" 11 1 14 3 At3g22700 F-box family protein contains Pfam:PF00646 F-box domain 11 1 14 4 3xSSC 3xSSC 11 1 14 5 At3g25670 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; +" 11 1 14 6 At3g25820 "myrcene/ocimene synthase, putative similar to GI:9957293; contains Pfam profile: PF01397 terpene synthase family" 11 1 14 7 At3g25870 expressed protein 11 1 14 8 At3g26010 F-box family protein contains Pfam:PF00646 F-box domain 11 1 14 9 At3g26070 plastid-lipid associated protein PAP / fibrillin family protein contains Pfam profile PF04755: PAP_fibrillin 11 1 14 10 At3g26190 "cytochrome P450 71B21, putative (CYP71B21) identical to Cytochrome P450 71B21 (SP:Q9LTM2) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 11 1 14 11 At3g26240 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 1 14 12 3xSSC 3xSSC 11 1 14 13 At3g29030 "expansin, putative (EXP5) identical to expansin At-EXP5 GB:AAB38071 from [Arabidopsis thaliana]; alpha-expansin gene family, PMID:11641069" 11 1 14 14 At3g29160 Snf1-related protein kinase (KIN11) identical to protein kinase AKin11 GI:1729444 from [Arabidopsis thaliana] 11 1 14 15 At3g29190 terpene synthase/cyclase family protein contains Pfam profile: PF01397 terpene synthase family 11 1 14 16 At3g29330 expressed protein 11 1 14 17 At3g29370 expressed protein 11 1 14 18 At3g29630 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 1 14 19 At3g29670 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 11 1 14 20 3xSSC 3xSSC 11 1 14 21 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 11 1 14 22 At3g43970 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 1 14 23 At3g44050 "kinesin motor protein-related KLP2 protein, Xenopus laevis, PIR:T30335" 11 1 14 24 At3g44200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 11 1 14 25 At3g44250 "cytochrome P450 family protein CYTOCHROME P450 71B7 - Arabidopsis thaliana, EMBL:X97864" 11 1 15 1 At3g44470 hypothetical protein 11 1 15 2 At3g44530 "transducin family protein / WD-40 repeat family protein contains 6 (4 significant) WD-40 repeats (PF0400); nuclear protein HIRA, mouse, PIR:S68141" 11 1 15 3 3xSSC 3xSSC 11 1 15 4 At3g47450 expressed protein 11 1 15 5 At3g47580 "leucine-rich repeat transmembrane protein kinase, putative protein kinase Xa21 - Oryza sativa, PIR:A57676" 11 1 15 6 At3g47640 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 1 15 7 At3g47810 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 11 1 15 8 At3g47840 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 15 9 At3g48030 "hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHX1a [Arabidopsis thaliana] GI:3790591; contains Pfam profiles PF00097: Zinc finger C3HC4 type (RING finger), PF04588: Hypoxia induced protein conserved region" 11 1 15 10 At3g48070 expressed protein 11 1 15 11 3xSSC 3xSSC 11 1 15 12 At3g51020 hypothetical protein 11 1 15 13 At3g51180 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 11 1 15 14 At3g51240 naringenin 3-dioxygenase / flavanone 3-hydroxylase (F3H) identical to GI:3790548 11 1 15 15 At3g51400 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 11 1 15 16 At3g51460 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; contains non-consensus AT-AC splice sites at intron 8" 11 1 15 17 At3g51620 expressed protein 11 1 15 18 At3g51680 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain alcohol dehydrogenase GI:1877480 from [Tripsacum dactyloides] 11 1 15 19 3xSSC 3xSSC 11 1 15 20 At3g54210 ribosomal protein L17 family protein contains Pfam profile: PF01196 ribosomal protein L17 11 1 15 21 At3g54380 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 11 1 15 22 At3g54440 "glycoside hydrolase family 2 protein similar to beta-galactosidase (lactase) from Alteromonas haloplanktis [SP|P81650]; contains Pfam glycoside hydrolase domains PF02836, PF02837, PF02929, PF02930" 11 1 15 23 At3g54590 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 1 15 24 At3g54650 F-box family protein (FBL17) contains similarity to F-box protein FBL2 GI:6010699 from [Rattus norvegicus] 11 1 15 25 At3g54826 zinc finger (DNL type) protein-related contains weak hit to PF05180: DNL zinc finger 11 1 16 1 At3g54880 expressed protein 11 1 16 2 3xSSC 3xSSC 11 1 16 3 At3g57710 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 1 16 4 At3g57860 expressed protein 11 1 16 5 At3g57920 "squamosa promoter-binding protein, putative similar to squamosa promoter binding protein-like 9 [Arabidopsis thaliana] GI:5931677; contains Pfam profile PF03110: SBP domain" 11 1 16 6 At3g58110 expressed protein 11 1 16 7 At3g58170 Bet1-like SNARE 1-1 / Bet1 / Sft1-like SNARE 14a / BS14a (BET11) identical to SP|Q9M2J9 Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a) (AtBS14a) [Mouse-ear cress] {Arabidopsis thaliana}; supporting cDNA gi|14030602|gb|AF368175.1|AF368175 11 1 16 8 At3g58350 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 11 1 16 9 At3g58410 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 11 1 16 10 3xSSC 3xSSC 11 1 16 11 At3g61190 BON1-associated protein 1 (BAP1) identical to BON1-associated protein 1 [Arabidopsis thaliana] GI:15487384; contains Pfam profile PF00168: C2 domain; supporting cDNA gi|15487383|gb|AY045765.1| 11 1 16 12 At3g61360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 1 16 13 At3g61400 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); 1-aminocyclopropane-1-carboxylate oxidase homolog - Arabidopsis thaliana, PIR:S59548" 11 1 16 14 At3g61560 reticulon family protein (RTNLB6) contains Pfam profile PF02453: Reticulon 11 1 16 15 At3g61610 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044; contains Pfam profile PF01263: Aldose 1-epimerase 11 1 16 16 At3g61770 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 11 1 16 17 At3g61830 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 11 1 16 18 3xSSC 3xSSC 11 1 16 19 At4g00810 60S acidic ribosomal protein P1 (RPP1B) similar to acidic ribosomal protein p1 11 1 16 20 At4g00960 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 11 1 16 21 At4g01020 "helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger), PF01485: IBR domain" 11 1 16 22 At4g01170 hypothetical protein 11 1 16 23 At4g01220 expressed protein 11 1 16 24 At4g01380 plastocyanin-like domain-containing protein 11 1 16 25 At4g01430 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 11 1 17 1 3xSSC 3xSSC 11 1 17 2 At4g04273 hypothetical protein 11 1 17 3 At4g04480 hypothetical protein 11 1 17 4 At4g04540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 11 1 17 5 At4g04730 hypothetical protein 11 1 17 6 At4g04780 expressed protein very low similarity to SP|Q13503 RNA polymerase II holoenzyme component SRB7 (RNAPII complex component SRB7) {Homo sapiens} 11 1 17 7 At4g04940 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats 11 1 17 8 At4g04985 expressed protein 11 1 17 9 3xSSC 3xSSC 11 1 17 10 At4g09750 short-chain dehydrogenase/reductase (SDR) family protein similar to androgen-regulated short-chain dehydrogenase/reductase 1 GI:9622124 from [Homo sapiens] 11 1 17 11 At4g09920 F-box family protein contains F-box domain Pfam:PF00646 11 1 17 12 At4g09960 MADS-box protein (AGL11) 11 1 17 13 At4g10100 "molybdenum cofactor synthesis family protein similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) [Homo sapiens]; contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; contains Pfam PF02597: ThiS family" 11 1 17 14 At4g10150 "zinc finger (C3HC4-type RING finger) family protein RING-H2 finger protein RHA1a, Arabidopsis thaliana,AF078683" 11 1 17 15 At4g10300 expressed protein 11 1 17 16 At4g10360 expressed protein 11 1 17 17 3xSSC 3xSSC 11 1 17 18 At4g13230 late embryogenesis abundant domain-containing protein / LEA domain-containing protein similar to late embryogenesis abundant protein [Picea glauca] GI:1161171; contains Pfam profile PF02987: Late embryogenesis abundant protein 11 1 17 19 At4g13345 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 11 1 17 20 At4g13390 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 1 17 21 At4g13550 "lipase class 3 family protein very low similarity to diacylglycerol lipase [Aspergillus oryzae] GI:1772352; contains Pfam profiles PF01764: Lipase (class 3), PF00168: C2 domain" 11 1 17 22 At4g13610 "DNA (cytosine-5-)-methyltransferase, putative similar to cytosine-5 methyltransferase (METII) [Arabidopsis thaliana] GI:6523846; contains Pfam profiles PF01426: BAH domain, PF00145: C-5 cytosine-specific DNA methylase" 11 1 17 23 At4g13760 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 11 1 17 24 At4g13820 "disease resistance family protein / LRR family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 11 1 17 25 3xSSC 3xSSC 11 1 18 1 At4g16200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam profile: PF01805 surp module 11 1 18 2 At4g16360 "5'-AMP-activated protein kinase beta-2 subunit, putative similar to Swiss-Prot:Q9QZH4 5'-AMP-activated protein kinase, beta-2 subunit (AMPK beta-2 chain) [Rattus norvegicus]" 11 1 18 3 At4g16420 transcriptional adaptor (ADA2b) identical to transcriptional adaptor ADA2b [Arabidopsis thaliana] gi|13591700|gb|AAK31320 11 1 18 4 At4g16540 heat shock protein-related contains similarity to Swiss-Prot:P80485 acid shock protein [Streptococcus thermophilus] 11 1 18 5 At4g16580 expressed protein 11 1 18 6 At4g16710 glycosyltransferase family protein 28 low similarity to C terminus subunit of GlcA transferase from Escherichia coli [GI:2586169]; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain 11 1 18 7 At4g16760 acyl-CoA oxidase (ACX1) identical to acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214 11 1 18 8 3xSSC 3xSSC 11 1 18 9 At4g19340 hypothetical protein 11 1 18 10 At4g19510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 1 18 11 At4g19560 "cyclin family protein similar to SP|O88874 Cyclin K (Fragment) {Mus musculus}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 11 1 18 12 At4g19710 "bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative similar to gb|X71364 [PIR|S46497] aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana" 11 1 18 13 At4g19760 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:505267 from [Nicotiana tabacum]" 11 1 18 14 At4g19940 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain;similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens]|8737673|gb|AV566223.1|AV566223 11 1 18 15 At4g19990 far-red impaired responsive family protein / FAR1 family protein similar to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF03101: FAR1 family 11 1 18 16 3xSSC 3xSSC 11 1 18 17 At4g22840 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 11 1 18 18 At4g22990 "SPX (SYG1/Pho81/XPR1) domain-containing protein low similarity to SP|P51564 Tetracycline resistance protein, class H {Pasteurella multocida}, SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF03105: SPX domain" 11 1 18 19 At4g23050 "protein kinase, putative similar to MAP3K delta-1 protein kinase [Arabidopsis thaliana] gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein kinase domain and PF00989 PAS domain" 11 1 18 20 At4g23210 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 11 1 18 21 At4g23260 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 11 1 18 22 At4g23420 "short-chain dehydrogenase/reductase (SDR) family protein similar to WW-domain oxidoreductase [Mus musculus] GI:6934274, WW domain-containing oxidoreductase isoform FORII [Homo sapiens] GI:15667686; contains Pfam PF00106: oxidoreductase, short chain dehydrogenase/reductase family" 11 1 18 23 At4g23470 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 1 18 24 3xSSC 3xSSC 11 1 18 25 At4g26090 "disease resistance protein RPS2 (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. identical to RPS2 (gi:13661831)" 11 1 19 1 At4g26220 "caffeoyl-CoA 3-O-methyltransferase, putative similar to caffeoyl-CoA O-methyltransferase [GI:1622926][Nicotiana tabacum], GI:2960356 [Populus balsamifera subsp. trichocarpa], AF036095 [Pinus taeda]" 11 1 19 2 At4g26280 sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008; contains Pfam profile PF00685: Sulfotransferase domain 11 1 19 3 At4g26430 "COP9 signalosome subunit 6 / CSN subunit 6 (CSN6B) identical to COP9 signalosome subunit 6 [Arabidopsis thaliana] GI:17940314, CSN complex subunit 6B [Arabidopsis thaliana] GI:18056667; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family; supporting cDNA gi|17940313|gb|AF434762.1|AF434762; identical to cDNA CSN complex subunit 6B (CSN6B) GI:18056666" 11 1 19 4 At4g26490 expressed protein 11 1 19 5 At4g26620 sucrase-related 11 1 19 6 At4g26670 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to SP|Q9Z0V8 Mitochondrial import inner membrane translocase subunit TIM17 A {Mus musculus}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17 11 1 19 7 3xSSC 3xSSC 11 1 19 8 At4g29300 expressed protein 11 1 19 9 At4g29470 "phospholipase A2, putative similar to secretory low molecular weight phospholipase A2 gamma [Arabidopsis thaliana] GI:26006457; contains INTERPRO domain IPR001211 phospholipase A2" 11 1 19 10 At4g29530 "2,3-diketo-5-methylthio-1-phosphopentane phosphatase family contains TIGRfam TIGR01489: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase" 11 1 19 11 At4g29690 type I phosphodiesterase/nucleotide pyrophosphatase family protein similar to SP|P22413 Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains Pfam profile PF01663: Type I phosphodiesterase / nucleotide pyrophosphatase 11 1 19 12 At4g29740 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase, Zea mays [gi:3882018] [gi:3441978]" 11 1 19 13 At4g29890 "choline monooxygenase, putative (CMO-like) similar to Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) from {Amaranthus tricolor} SP|Q93XE1, {Beta vulgaris} SP|O22553; contains Pfam Rieske [2Fe-2S] domain PF00355" 11 1 19 14 At4g29940 pathogenesis-related homeodomain protein (PRHA) identical to Pathogenesis-related homeodomain protein (PRHA) (SP:P48785) [Arabidopsis thaliana) 11 1 19 15 3xSSC 3xSSC 11 1 19 16 At4g32500 "potassium channel protein, putative similar to potassium channel [Solanum tuberosum] gi|1514649|emb|CAA60016; similar to AKT1 [Arabidopsis thaliana] gi|563112|gb|AAA96810; member of the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+ channel family, PMID:11500563" 11 1 19 17 At4g32640 sec23/sec24 transport protein-related 11 1 19 18 At4g32690 2-on-2 hemoglobin (GLB3) identical to 2-on-2 hemoglobin (GLB3) GI:14165163 from [Arabidopsis thaliana] 11 1 19 19 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 11 1 19 20 At4g32900 expressed protein 11 1 19 21 At4g33040 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 11 1 19 22 At4g33090 aminopeptidase M similar to SP|Q11011 Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA) {Mus musculus}; contains Pfam profile PF01433: Peptidase family M1 11 1 19 23 AT5G57480 PC-1 A02 11 1 19 24 3XSSC PC-1 A14 11 1 19 25 AT1G29930 PC-1 E02 11 1 20 1 3XSSC PC-1 E14 11 1 20 2 AT3G44150 PC-1 I02 11 1 20 3 3XSSC PC-1 I14 11 1 20 4 AT4G00810 PC-1 M02 11 1 20 5 3XSSC PC-1 M14 11 1 20 6 3xSSC 3xSSC 11 1 20 7 At4g35750 Rho-GTPase-activating protein-related contains weak similarity to Rho-GTPase-activating protein 1 (GTPase-activating protein rhoOGAP) (Rho-related small GTPase protein activator) (CDC42 GTPase-activating protein) (p50-rhoGAP) (Swiss-Prot:Q07960) [Homo sapiens] 11 1 20 8 At4g35890 La domain-containing protein contains Pfam PF05383: La domain 11 1 20 9 At4g35930 expressed protein 11 1 20 10 At4g36060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 1 20 11 At4g36110 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR22 (GP:10185820) {Tulipa gesnerian]; auxin-induced protein 15A (PIR2:JQ1096) [Glycine max]" 11 1 20 12 At4g36280 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Mus musculus] GI:5410255; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 11 1 20 13 At4g36370 expressed protein 11 1 20 14 3xSSC 3xSSC 11 1 20 15 At4g39060 F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF00646: F-box domain 11 1 20 16 At4g39235 expressed protein 11 1 20 17 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 11 1 20 18 At4g39380 expressed protein 11 1 20 19 At4g39420 expressed protein ; expression supported by MPSS 11 1 20 20 At4g39580 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 11 1 20 21 At4g39640 gamma-glutamyltranspeptidase family protein similar to SP|P19440 Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (CD224 antigen) {Homo sapiens}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 11 1 20 22 3xSSC 3xSSC 11 1 20 23 At5g03200 zinc finger (C3HC4-type RING finger) family protein contains weak similarity to zinc finger proteins 11 1 20 24 At5g03370 acylphosphatase family contains Pfam PF00708: Acylphosphatase 11 1 20 25 At5g03430 "phosphoadenosine phosphosulfate (PAPS) reductase family protein low similarity to SP|P38913 FAD synthetase (EC 2.7.7.2) {Saccharomyces cerevisiae}; contains Pfam profiles PF01507: Phosphoadenosine phosphosulfate reductase family, PF00994: Probable molybdopterin binding domain" 11 1 21 1 At5g03555 "permease, cytosine/purines, uracil, thiamine, allantoin family protein contains Pfam PF02133: permease, cytosine/purines, uracil, thiamine, allantoin family" 11 1 21 2 At5g03610 GDSL-motif lipase/hydrolase family protein low similarity to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 11 1 21 3 At5g03790 homeobox-leucine zipper family protein similar to homeobox-leucine zipper protein Athb-7 (SP:P46897) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain 11 1 21 4 At5g03850 "40S ribosomal protein S28 (RPS28B) ribosomal protein S28, Arabidopsis thaliana, EMBL:ATRP28A" 11 1 21 5 3xSSC 3xSSC 11 1 21 6 At5g06500 MADS-box family protein contains similarity to MADS-box transcription factor 11 1 21 7 At5g06660 expressed protein contains PF05809: Eukaryotic protein of unknown function (DUF841) 11 1 21 8 At5g06710 homeobox-leucine zipper protein 14 (HAT14) / HD-ZIP protein 14 contains similarity to homeodomain leucine zipper protein 11 1 21 9 At5g06890 hypothetical protein 11 1 21 10 At5g06940 "leucine-rich repeat family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 11 1 21 11 At5g07100 "WRKY family transcription factor SPF1 protein - Ipomoea batatas (sweet potato), PIR:S51529" 11 1 21 12 At5g07140 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 11 1 21 13 3xSSC 3xSSC 11 1 21 14 At5g10300 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, alpha-hydroxynitrile lyase [Manihot esculenta] GI:2780225; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 11 1 21 15 At5g10460 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 11 1 21 16 At5g10520 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 11 1 21 17 At5g10680 calmodulin-binding protein-related contains weak similarity to calmodulin-binding proteins 11 1 21 18 At5g10710 expressed protein 11 1 21 19 At5g10880 tRNA synthetase-related / tRNA ligase-related similar to SP|P07814 Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] {Homo sapiens}; contains Pfam profile PF03129: Anticodon binding domain 11 1 21 20 At5g10940 "transducin family protein / WD-40 repeat family protein unnamed ORF cDNA FLJ10872, Homo sapiens, EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta repeat (6 copies,1 weak)" 11 1 21 21 3xSSC 3xSSC 11 1 21 22 At5g14110 hypothetical protein 11 1 21 23 At5g14290 hypothetical protein 11 1 21 24 At5g14350 plastocyanin-like domain-containing protein similar to NtEPc [Nicotiana tabacum] GI:4514716; contains Pfam profile PF02298: Plastocyanin-like domain 11 1 21 25 At5g14530 "transducin family protein / WD-40 repeat family protein similar to Will die slowly protein (SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak)" 11 1 22 1 At5g14570 "transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362; contains Pfam profile PF00083: Sugar (and other) transporter" 11 1 22 2 At5g14740 carbonic anhydrase 2 / carbonate dehydratase 2 (CA2) (CA18) nearly identical to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana} 11 1 22 3 At5g14790 expressed protein 11 1 22 4 3xSSC 3xSSC 11 1 22 5 At5g17530 phosphoglucosamine mutase family protein low similarity to phosphoglucomutase/phosphomannomutase [Sphingomonas paucimobilis] GI:6103619; contains InterPro accession IPR006352: Phosphoglucosamine mutase 11 1 22 6 At5g17710 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform a [Chlamydomonas reinhardtii] GI:15384277; contains Pfam profile PF01025: co-chaperone GrpE 11 1 22 7 At5g17750 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 11 1 22 8 At5g17910 expressed protein 11 1 22 9 At5g17980 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 11 1 22 10 At5g18130 expressed protein similar to unknown protein (gb|AAF00631.1) 11 1 22 11 At5g18190 "protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain" 11 1 22 12 3xSSC 3xSSC 11 1 22 13 At5g20820 auxin-responsive protein-related similar to auxin-induced protein TGSAUR21 (GI:10185818) Tulipa gesneriana] 11 1 22 14 At5g20960 aldehyde oxidase 1 (AAO1) identical to aldehyde oxidase AAO1 from Arabidopsis thaliana [gi:3172023] isoform contains a GA-donor splice site at intron 10 11 1 22 15 At5g21030 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 11 1 22 16 At5g21274 calmodulin-6 (CAM6) identical to calmodulin-6 SP:Q03509 from [Arabidopsis thaliana]; contains Pfam profile: PF00036 EF hand 11 1 22 17 At5g21920 YGGT family protein contains Pfam profile PF02325: YGGT family (unknown function); supported by full length cDNA GI:22531282 from [Arabidopsis thaliana] 11 1 22 18 At5g22060 "DNAJ heat shock protein, putative strong similarity to SP|O60884 DnaJ homolog subfamily A member 2 (Dnj3) Homo sapiens, several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 11 1 22 19 At5g22120 expressed protein 11 1 22 20 3xSSC 3xSSC 11 1 22 21 At5g24800 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor; identical to cDNA bZIP protein BZO2H2 GI:10954096 11 1 22 22 At5g24970 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 11 1 22 23 At5g25030 hypothetical protein 11 1 22 24 At5g25210 expressed protein 11 1 22 25 At5g25265 expressed protein 11 1 23 1 At5g25410 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 11 1 23 2 At5g25450 "ubiquinol-cytochrome C reductase complex 14 kDa protein, putative similar to SP|P48502 Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam profile PF02271: Ubiquinol-cytochrome C reductase complex 14kD subunit" 11 1 23 3 3xSSC 3xSSC 11 1 23 4 At5g28480 hypothetical protein 11 1 23 5 At5g28630 glycine-rich protein 11 1 23 6 At5g28690 expressed protein 11 1 23 7 At5g28850 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 11 1 23 8 At5g28920 expressed protein 11 1 23 9 At5g29613 hypothetical protein 11 1 23 10 At5g31752 hypothetical protein 11 1 23 11 3xSSC 3xSSC 11 1 23 12 At5g37490 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 11 1 23 13 At5g37650 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 11 1 23 14 At5g37720 "RNA and export factor-binding protein, putative transcriptional coactivator ALY, Mus musculus, EMBL:MMU89876" 11 1 23 15 At5g37900 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 11 1 23 16 At5g37960 oxidoreductase-related 11 1 23 17 At5g38130 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 11 1 23 18 At5g38190 myosin heavy chain-related 11 1 23 19 3xSSC 3xSSC 11 1 23 20 At5g41090 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to unknown protein (emb|CAB88055.1) 11 1 23 21 At5g41260 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 1 23 22 At5g41315 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain ;annotation temporarily based on supporting cDNA gi|17224394|gb|AF246291.1|AF246291 11 1 23 23 At5g41500 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 11 1 23 24 At5g41550 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 1 23 25 At5g41700 "ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131" 11 1 24 1 At5g41750 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 1 24 2 3xSSC 3xSSC 11 1 24 3 At5g44450 expressed protein contains Pfam profile PF05891: Eukaryotic protein of unknown function (DUF858) 11 1 24 4 At5g44610 DREPP plasma membrane polypeptide-related contains Pfam profile: PF05558 DREPP plasma membrane polypeptide 11 1 24 5 At5g44660 expressed protein similar to unknown protein (pir||T05327) 11 1 24 6 At5g44785 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) 11 1 24 7 At5g44850 hypothetical protein strong similarity to unknown protein (gb AAC79136.1) 11 1 24 8 At5g45010 DSS1/SEM1 family protein contains Pfam profile PF05160: DSS1/SEM1 family 11 1 24 9 At5g45070 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 11 1 24 10 3xSSC 3xSSC 11 1 24 11 At5g47640 "CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; identical to cDNA transcription factor Hap3b (Hap3b) mRNA, partial cds GI:9965734" 11 1 24 12 At5g47810 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 11 1 24 13 At5g47840 "adenylate kinase, chloroplast, putative / ATP-AMP transphosphorylase, putative similar to SP|P43188 Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) {Zea mays}; contains Pfam profile PF00406: Adenylate kinase" 11 1 24 14 At5g48020 expressed protein 11 1 24 15 At5g48080 expressed protein ; expression supported by MPSS 11 1 24 16 At5g48240 hypothetical protein 11 1 24 17 At5g48310 expressed protein 11 1 24 18 3xSSC 3xSSC 11 1 24 19 At5g51040 expressed protein 11 1 24 20 At5g51190 "AP2 domain-containing transcription factor, putative contains similarity to ethylene responsive element binding factor" 11 1 24 21 At5g51230 embryonic flower 2 (EMF2) identical to embryonic flower 2 [Arabidopsis thaliana] GI:14276050; supporting cDNA gi|14276049|dbj|AB053171.1| 11 1 24 22 At5g51400 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 11 1 24 23 At5g51450 "zinc finger (C3HC4-type RING finger) family protein contains similarity to autocrine motility factor receptor [Mus musculus] GI:5931953; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF02845: CUE domain" 11 1 24 24 At5g51620 expressed protein 11 1 24 25 At5g51650 hypothetical protein 11 1 25 1 3xSSC 3xSSC 11 1 25 2 At5g54460 wound-responsive protein-related contains weak similarity to KED [Nicotiana tabacum] gi|8096269|dbj|BAA95789 11 1 25 3 At5g54600 "50S ribosomal protein L24, chloroplast (CL24) identical to SP|P92959 50S ribosomal protein L24, chloroplast precursor {Arabidopsis thaliana}" 11 1 25 4 At5g54650 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 11 1 25 5 At5g54820 F-box family protein contains Pfam:PF00646 F-box domain 11 1 25 6 At5g54855 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 11 1 25 7 At5g55000 "potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein contains Pfam profiles PF02214: K+ channel tetramerisation domain, PF00805: Pentapeptide repeats (8 copies)" 11 1 25 8 At5g55050 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 11 1 25 9 3xSSC 3xSSC 11 1 25 10 At5g57785 expressed protein 11 1 25 11 At5g57910 expressed protein similar to unknown protein (emb|CAB79781.1) 11 1 25 12 At5g57970 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 11 1 25 13 At5g58140 "protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441" 11 1 25 14 At5g58190 expressed protein contains Pfam profile PF04146: YT521-B-like family 11 1 25 15 At5g58320 kinase interacting protein-related low similarity to kinase interacting protein 1 [Petunia integrifolia] GI:13936326 11 1 25 16 At5g58370 expressed protein 11 1 25 17 3xSSC 3xSSC 11 1 25 18 At5g61010 "exocyst subunit EXO70 family protein leucine zipper-containing protein, tomato, PIR:S21495; contains Pfam domain PF03081: Exo70 exocyst complex subunit; similar to rexo70 (GI:2827160) {Rattus norvegicus}" 11 1 25 19 At5g61160 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 11 1 25 20 At5g61220 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 11 1 25 21 At5g61380 ABI3-interacting protein 1 (AIP1) identical to pseudo-response regulator 1 GI:7576354 from [Arabidopsis thaliana]; timing of CAB expression 1 protein (TOC1) GI:9247019; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA ABI3-interacting protein 1 (aip1 gene) GI:6996312 11 1 25 22 At5g61420 myb family transcription factor (MYB28) contains Pfam profile: PF00249 myb-like DNA-binding domain 11 1 25 23 At5g61560 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 1 25 24 At5g61610 "glycine-rich protein / oleosin similar to variable surface lipoprotein Vsp422-3 (GI:15384285) [Mycoplasma bovis]; similar to glycine-rich protein atGRP-6, Arabidopsis thaliana, PIR:T49893" 11 1 25 25 3xSSC 3xSSC 11 1 26 1 At5g64370 "beta-ureidopropionase, putative / beta-alanine synthase, putative similar to beta-alanine synthase [Dictyostelium discoideum] GI:14334061; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 11 1 26 2 At5g64500 membrane protein-related contains weak similarity to spinster type IV (GI:12003976) [Drosophila melanogaster] 11 1 26 3 At5g64550 loricrin-related contains weak similarity to Loricrin (Swiss-Prot:P23490) [Homo sapiens] 11 1 26 4 At5g64680 expressed protein 11 1 26 5 At5g64730 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to Will die slowly protein (SP:Q9V3J8) [Fruit fly] {Drosophila m.] 11 1 26 6 At5g64870 expressed protein 11 1 26 7 At5g64920 "COP1-interacting protein (CIP8) / zinc finger (C3HC4-type RING finger) family protein identical to COP1-interacting protein CIP8 [Arabidopsis thaliana] gi|5929906|gb|AAD56636; contains Pfam profile: PF00097 zinc finger, C3HC4 type" 11 1 26 8 3xSSC 3xSSC 11 1 26 9 At5g67480 "TAZ zinc finger family protein / BTB/POZ domain-containing protein contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; simiar to Chain A, Taz2 Domain Of The Transcriptional Adaptor Protein Cbp (GI:11514507) [Homo sapiens]; similar to (SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo sapiens]; similar to histone acetyltransferase HAC4 (GI:21105785) [Arabidopsis thaliana]" 11 1 26 10 At1g24880 "UDP-3-0-acyl N-acetylglucosamine deacetylase family protein / F-box protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain and weak hit to Pfam PF00646: F-box domain; similar to ESTs dbj AV442495.1, gb|BE522756.1, gb|T42945.1, gb|BE525268.1, gb|BE523201.1, gb|BE526298.1, gb|T42945.1, gb|AA651584.1, dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1" 11 1 26 11 At1g53890 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 11 1 26 12 At5g55890 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 11 1 26 13 ath-MIR171b miRNA gene Arabidopsis thaliana miR171b stem-loop 11 1 26 14 ath-MIR166a miRNA gene Arabidopsis thaliana miR166a stem-loop 11 1 26 15 ath-MIR168b miRNA gene Arabidopsis thaliana miR168b stem-loop 11 1 26 16 3xSSC 3xSSC 11 1 26 17 At3g43790 transporter-related low similarity to SP|P39843 Multidrug resistance protein 2 (Multidrug-efflux transporter 2) {Bacillus subtilis}; contains Pfam profile PF00083: major facilitator superfamily protein 11 1 26 18 At3g43970 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 1 26 19 At3g44050 "kinesin motor protein-related KLP2 protein, Xenopus laevis, PIR:T30335" 11 1 26 20 At3g44200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 11 1 26 21 At3g44250 "cytochrome P450 family protein CYTOCHROME P450 71B7 - Arabidopsis thaliana, EMBL:X97864" 11 1 26 22 At3g44470 hypothetical protein 11 1 26 23 At3g44530 "transducin family protein / WD-40 repeat family protein contains 6 (4 significant) WD-40 repeats (PF0400); nuclear protein HIRA, mouse, PIR:S68141" 11 1 26 24 Blank Blank 11 1 26 25 Blank Blank 11 2 1 1 3xSSC 3xSSC 11 2 1 2 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 11 2 1 3 atc12 Randomly generated negative control 11 2 1 4 Alien6 Control: Stratagene Spotreport Alien Oligo 11 2 1 5 atc02 Randomly generated negative control 11 2 1 6 atc08 Randomly generated negative control 11 2 1 7 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 11 2 1 8 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 11 2 1 9 3xSSC 3xSSC 11 2 1 10 At1g02750 "drought-responsive family protein contains similarity to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 11 2 1 11 At1g02870 expressed protein 11 2 1 12 At1g02910 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 11 2 1 13 At1g03020 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 11 2 1 14 At1g03060 "WD-40 repeat family protein / beige-related similar to BEIGE (GI:3928547) [Rattus norvegicus]; Similar to gb|U70015 lysosomal trafficking regulator from Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236 come from this gene" 11 2 1 15 At1g03210 phenazine biosynthesis PhzC/PhzF family protein contains Pfam profile: PF02567 phenazine biosynthesis-like protein 11 2 1 16 At1g03270 expressed protein contains Pfam profile PF01595: Domain of unknown function 11 2 1 17 3xSSC 3xSSC 11 2 1 18 At1g06010 expressed protein 11 2 1 19 At1g06140 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 11 2 1 20 At1g06180 myb family transcription factor identical to GB:CAA90748 GI:1263093 from [Arabidopsis thaliana];contains PFAM profile:PF00249 11 2 1 21 At1g06360 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 11 2 1 22 At1g06420 expressed protein ; expression supported by MPSS 11 2 1 23 At1g06590 expressed protein 11 2 1 24 At1g06650 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 11 2 1 25 3xSSC 3xSSC 11 2 2 1 At1g09200 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 11 2 2 2 At1g09360 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 11 2 2 3 At1g09415 "NPR1/NIM1-interacting protein 3 (NIMIN-3) identical to NIMIN-3 protein [Arabidopsis thaliana] GI:12057158, cDNA NIMIN-3 protein (nimin-3 gene)GI:12057157" 11 2 2 4 At1g09560 "germin-like protein (GLP4) (GLP5) identical to Arabidopsis germin-like protein subfamily 2 member 1 [SP|P94014]; Location of EST 180L10T7, gi|906417" 11 2 2 5 At1g09610 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 11 2 2 6 At1g09760 "U2 small nuclear ribonucleoprotein A, putative identical to U2 small nuclear ribonucleoprotein A' (U2 snRNP-A') [Arabidopsis thaliana] SWISS-PROT:P43333; supported by cDNA:gi_16649064_gb_AY059902.1_" 11 2 2 7 At1g09810 expressed protein contains Pfam profile PF04146: YT521-B-like family 11 2 2 8 3xSSC 3xSSC 11 2 2 9 At1g12430 armadillo/beta-catenin repeat family protein / kinesin motor family protein 11 2 2 10 At1g12610 "DRE-binding protein, putative / CRT/DRE-binding factor, putative similar to DREB1A GI:3738224 from [Arabidopsis thaliana] and to transcriptional activator CBF1 GI:1899058 from [Arabidopsis thaliana" 11 2 2 11 At1g12670 arabinogalactan-protein family contains regions of similarity to arabinogalactan-proteins 11 2 2 12 At1g12840 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) identical to vacuolar ATP synthase subunit C SP:Q9SDS7 from [Arabidopsis thaliana] 11 2 2 13 At1g12890 "AP2 domain-containing transcription factor, putative " 11 2 2 14 At1g13080 "cytochrome P450 family protein identical to gb|D78605 cytochrome P450 monooxygenase from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and gb|T43466 come from this gene" 11 2 2 15 At1g13130 glycosyl hydrolase family 5 protein / cellulase family protein 11 2 2 16 3xSSC 3xSSC 11 2 2 17 At1g15830 expressed protein 11 2 2 18 At1g15980 expressed protein 11 2 2 19 At1g16030 "heat shock protein 70, putative / HSP70, putative similar to heat shock protein hsp70 GI:1771478 from [Pisum sativum]" 11 2 2 20 At1g16220 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 11 2 2 21 At1g16270 "protein kinase family protein contains PF|00069 Eukaryotic protein kinase domain. ESTs gb|H37741, gb|T43005 and gb|AI100340 come from this gene" 11 2 2 22 At1g16430 surfeit locus protein 5 family protein / SURF5 family protein similar to Surfeit locus protein 5 (surf5) (SP:Q62276) [Mus musculus]; similar to Surfeit locus protein 5 (SP:Q15528) [Homo sapiens] 11 2 2 23 At1g16490 myb family transcription factor (MYB58) contains PFAM profile: myb DNA binding domain PF00249 11 2 2 24 3xSSC 3xSSC 11 2 2 25 At1g19340 methyltransferase MT-A70 family protein contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase)) 11 2 3 1 At1g19500 hypothetical protein 11 2 3 2 At1g19550 "dehydroascorbate reductase, putative similar to dehydroascorbate reductase [Arabidopsis thaliana] gi|10952514|gb|AAG24946" 11 2 3 3 At1g19740 ATP-dependent protease La (LON) domain-containing protein weak similarity to SP|P36774 ATP-dependent protease La 2 (EC 3.4.21.53) {Myxococcus xanthus}; contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 11 2 3 4 At1g19830 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR21 (GI:10185818) [Tulipa gesneriana]" 11 2 3 5 At1g20000 transcription initiation factor IID (TFIID) 28 kDa subunit (TAFII-28) family protein similar to SP|Q15544 Transcription initiation factor TFIID 28 kDa subunit (TAFII-28) (TAFII28) (TFIID subunit p30-beta) {Homo sapiens}; contains Pfam profile PF04719: hTAFII28-like protein conserved region 11 2 3 6 At1g20070 expressed protein 11 2 3 7 3xSSC 3xSSC 11 2 3 8 At1g22900 disease resistance-responsive family protein similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 11 2 3 9 At1g23030 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 11 2 3 10 At1g23070 hypothetical protein contains Pfam profile PF03619: Domain of unknown function 11 2 3 11 At1g23220 "dynein light chain type 1 family protein similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 11 2 3 12 At1g23260 ubiquitin-conjugating enzyme family protein similar to TRAF6-regulated IKK activator 1 beta Uev1A [Homo sapiens] GI:10880969; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 11 2 3 13 At1g23410 "ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) strong similarity to ubiquitin extension protein (UBQ5) GB:AAA32906 GI:166934 from (Arabidopsis thaliana)" 11 2 3 14 At1g23460 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase GB:BAA88472 GI:6624205 from (Cucumis sativus); contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 11 2 3 15 3xSSC 3xSSC 11 2 3 16 At1g27200 expressed protein contains Pfam PF01697: Domain of unknown function 11 2 3 17 At1g27370 squamosa promoter-binding protein-like 10 (SPL10) identical to squamosa promoter binding protein-like 10 [Arabidopsis thaliana] GI:5931669; contains Pfam profile PF03110: SBP domain 11 2 3 18 At1g27400 60S ribosomal protein L17 (RPL17A) similar to GB:P51413 from [Arabidopsis thaliana]; similar to ESTs gb|L33542 and gb|AA660016 11 2 3 19 At1g27550 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 11 2 3 20 At1g27600 "glycosyl transferase family 43 protein similar to Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, Rattus norvegicus [SP|O35789], Homo sapiens [SP|Q9P2W7]; contains Pfam domain Glycosyltransferase family 43 [PF03360]" 11 2 3 21 At1g27760 interferon-related developmental regulator family protein / IFRD protein family contains Pfam PF05004: Interferon-related developmental regulator (IFRD); similar to IFR1 protein GI:16580630 [Gallus gallus]; similar to Interferon-related developmental regulator 1 (TPA induced sequence 7) (TIS7 protein) (SP:P19182) {Mus musculus} 11 2 3 22 At1g27800 hypothetical protein 11 2 3 23 3xSSC 3xSSC 11 2 3 24 At1g30795 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR000694" 11 2 3 25 At1g30960 GTP-binding protein (ERG) identical to GTP-binding protein ERG SP:O82653 from [Arabidopsis thaliana] 11 2 4 1 At1g31040 zinc-binding protein-related simialr to zinc-binding protein [Pisum sativum] GI:16117799 11 2 4 2 At1g31220 "phosphoribosylglycinamide formyltransferase similar to phosphoribosylglycinamide formyltransferase, chloroplast precursor [Arabidopsis thaliana] SWISS-PROT:P52422" 11 2 4 3 At1g31280 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 11 2 4 4 At1g31450 "aspartyl protease family protein contains eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 11 2 4 5 At1g31500 endonuclease/exonuclease/phosphatase family protein low similarity to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 11 2 4 6 3xSSC 3xSSC 11 2 4 7 At1g34610 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 11 2 4 8 At1g35040 hypothetical protein 11 2 4 9 At1g35150 hypothetical protein 11 2 4 10 At1g35350 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 11 2 4 11 At1g35430 expressed protein 11 2 4 12 At1g35617 hypothetical protein 11 2 4 13 At1g35660 expressed protein 11 2 4 14 3xSSC 3xSSC 11 2 4 15 At1g47350 F-box family protein-related contains TIGR01640: F-box protein interaction domain 11 2 4 16 At1g47540 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 11 2 4 17 At1g47580 "lipoyltransferase, putative similar to lipoyltransferase (LIP2p) [Arabidopsis thaliana] GI:15887052; contains Pfam profile PF03099: Biotin/lipoate A/B protein ligase family" 11 2 4 18 At1g47770 hypothetical protein 11 2 4 19 At1g47810 F-box family protein contains F-box domain Pfam:PF00646 11 2 4 20 At1g48000 myb family transcription factor similar to myb-related transcription factor (cpm10) GB:U33915 GI:1002795 from [Craterostigma plantagineum] 11 2 4 21 At1g48050 "Ku80 family protein identical to Ku80-like protein [Arabidopsis thaliana] GI:12006422; contains Pfam profiles: PF02197 Regulatory subunit of type II PKA R-subunit, PF02735: Ku70/Ku80 beta-barrel domain, PF03731: Ku70/Ku80 N-terminal alpha/beta domain, PF03730: Ku70/Ku80 C-terminal arm" 11 2 4 22 3xSSC 3xSSC 11 2 4 23 At1g51140 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 2 4 24 At1g51330 serpin-related / serine protease inhibitor-related similar to serpin [Hordeum vulgare subsp. vulgare] CAA64599.1 GI:1197577 11 2 4 25 At1g51370 F-box family protein contains F-box domain Pfam:PF00646 11 2 5 1 At1g51520 "expressed protein contains a weak hit to PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 11 2 5 2 At1g51570 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 11 2 5 3 At1g51690 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to 55 kDa B regulatory subunit of phosphatase 2A (GI:710330) [Arabidopsis thaliana]; similar to type 2A protein serine/threonine phosphatase 55 kDa B regulatory GI:1408460 [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 11 2 5 4 At1g51745 expressed protein 11 2 5 5 3xSSC 3xSSC 11 2 5 6 At1g54420 hypothetical protein 11 2 5 7 At1g54590 splicing factor Prp18 family protein contains Pfam profile: PF02840 Prp18 domain 11 2 5 8 At1g54680 expressed protein 11 2 5 9 At1g54830 "CCAAT-box binding transcription factor Hap5a, putative similar to heme activated protein GI:6289057 from (Arabidopsis thaliana) GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina} similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 11 2 5 10 At1g54880 hypothetical protein 11 2 5 11 At1g55040 "zinc finger (Ran-binding) family protein contains Pfam PF00641: Zn-finger in Ran binding protein and others; contains Prosite PS00018: EF-hand calcium-binding domain; similar to Zinc finger protein 265 (Zinc finger, splicing) (Fragment). (SP:Q9R020){Mus musculus}" 11 2 5 12 At1g55110 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 2 5 13 3xSSC 3xSSC 11 2 5 14 At1g59650 expressed protein ; supporting cDNA gi|6520232|dbj|AB028233.1| 11 2 5 15 At1g59800 cullin-related similar to cullin 3 [Homo sapiens] GI:3639052 11 2 5 16 At1g59840 expressed protein 11 2 5 17 At1g59980 DNAJ heat shock N-terminal domain-containing protein similar to Altered Response to Gravity [Arabidopsis thaliana] GI:4249662; contains Pfam profile PF00226 DnaJ domain 11 2 5 18 At1g60030 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 11 2 5 19 At1g60240 apical meristem formation protein-related contains similarity to CUC1 [Arabidopsis thaliana] gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida] gi|1279640|emb|CAA63101 11 2 5 20 At1g60350 no apical meristem (NAM) protein-related contains Pfam PF02365 : No apical meristem (NAM) protein; similar to CUP-SHAPED COTYLEDON1 (CUC1) (GI:12060422) [Arabidopsis thaliana] 11 2 5 21 3xSSC 3xSSC 11 2 5 22 At1g63260 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 11 2 5 23 At1g63420 expressed protein 11 2 5 24 At1g63480 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 11 2 5 25 At1g63640 kinesin motor protein-related C-terminal region is similar to C-term region of kinesin motor protein GB:AAB51397 (Mus musculus); contains Pfam profile: PF00225 Kinesin motor domain 11 2 6 1 At1g63690 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 11 2 6 2 At1g63840 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 finger protein RHA1a (GI:3790554) [Arabidopsis thaliana]' similar to BRH1 RING finger protein [Arabidopsis thaliana] GI:4689366; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 11 2 6 3 At1g63870 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 6 4 3xSSC 3xSSC 11 2 6 5 At1g66730 ATP dependent DNA ligase family protein contains Pfam profile: PF01068 ATP dependent DNA ligase domain 11 2 6 6 At1g66890 expressed protein 11 2 6 7 At1g66940 protein kinase-related 11 2 6 8 At1g67090 "ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) identical to SP|P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) {Arabidopsis thaliana}" 11 2 6 9 At1g67150 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 11 2 6 10 At1g67325 zinc finger (Ran-binding) family protein similar to ZIS2 [Homo sapiens] GI:4191329; contains Pfam profile PF00641: Zn-finger in Ran binding protein and others 11 2 6 11 At1g67390 F-box family protein contains Pfam PF00646: F-box domain 11 2 6 12 3xSSC 3xSSC 11 2 6 13 At1g70100 expressed protein 11 2 6 14 At1g70250 "receptor serine/threonine kinase, putative similar to to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208" 11 2 6 15 At1g70310 spermidine synthase 2 (SPDSYN2) / putrescine aminopropyltransferase 2 identical to SP|O48661 Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2) {Arabidopsis thaliana} 11 2 6 16 At1g70470 expressed protein 11 2 6 17 At1g70500 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase [Cucumis sativus] GI:6624205; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 11 2 6 18 At1g70640 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 11 2 6 19 At1g70700 expressed protein 11 2 6 20 3xSSC 3xSSC 11 2 6 21 At1g73600 "phosphoethanolamine N-methyltransferase 3, putative (NMT3) strong similarity to SP|Q9FR44 Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to SP|Q9C6B9 Putative phosphoethanolamine N-methyltransferase 3 {Arabidopsis thaliana}" 11 2 6 22 At1g73730 "ethylene-insensitive3-like3 (EIL3) identical to ethylene-insensitive3-like3 (EIL3) GB:AF004215 [Arabidopsis thaliana] (Cell 89 (7), 1133-1144 (1997))" 11 2 6 23 At1g73790 expressed protein 11 2 6 24 At1g73950 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 11 2 6 25 At1g74000 strictosidine synthase family protein similar to strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088 11 2 7 1 At1g74160 expressed protein 11 2 7 2 At1g74220 expressed protein similar to GB:AAD20071 from [Arabidopsis thaliana] 11 2 7 3 AT5G57480 PC-1 B02 11 2 7 4 3XSSC PC-1 B14 11 2 7 5 AT1G29930 PC-1 F02 11 2 7 6 3XSSC PC-1 F14 11 2 7 7 AT3G44150 PC-1 J02 11 2 7 8 3XSSC PC-1 J14 11 2 7 9 AT4G00810 PC-1 N02 11 2 7 10 3XSSC PC-1 N14 11 2 7 11 3xSSC 3xSSC 11 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 11 2 7 13 At1g77210 "sugar transporter, putative similar to monosaccharide transporter PaMst-1 [Picea abies] GI:2258137, sugar carrier protein GI:169735 from [Ricinus communis], glucose transporter [Saccharum hybrid cultivar H65-7052] GI:347855; contains Pfam profile PF00083: major facilitator superfamily protein" 11 2 7 14 At1g77270 expressed protein 11 2 7 15 At1g77450 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to GRAB1 protein GB:CAA09371, a novel member of the NAC domain family" 11 2 7 16 At1g77490 "L-ascorbate peroxidase, thylakoid-bound (tAPX) identical to thylakoid-bound ascorbate peroxidase GB:CAA67426 [Arabidopsis thaliana]" 11 2 7 17 At1g77670 aminotransferase class I and II family protein similar to kynurenine aminotransferase /glutamine transaminase K GI:1030066 [Rattus norvegicus] 11 2 7 18 At1g77730 pleckstrin homology (PH) domain-containing protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profile PF00169: PH domain 11 2 7 19 3xSSC 3xSSC 11 2 7 20 At1g80330 "gibberellin 3-beta-dioxygenase, putative / gibberellin 3 beta-hydroxylase, putative similar to gibberellin 3 beta-hydroxylase GA4H GB:AAC83647 [Arabidopsis thaliana], GA4 [GI:2160454]" 11 2 7 21 At1g80480 "PRLI-interacting factor L, putative similar to PRLI-interacting factor L [Arabidopsis thaliana] GI:11139268; contains Pfam profile PF02492: Cobalamin synthesis protein/P47K" 11 2 7 22 At1g80540 expressed protein ; expression supported by MPSS 11 2 7 23 At1g80720 mitochondrial glycoprotein family protein / MAM33 family protein similar to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 11 2 7 24 At1g80780 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 11 2 7 25 At1g80930 "MIF4G domain-containing protein / MA3 domain-containing protein similar to SP|Q9P6R9 Cell cycle control protein cwf22 {Schizosaccharomyces pombe}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain" 11 2 8 1 At1g80970 XH domain-containing protein contains Pfam profile: PF03469 XH domain 11 2 8 2 3xSSC 3xSSC 11 2 8 3 At2g04030 "heat shock protein, putative strong similarity to heat shock protein [Arabidopsis thaliana] GI:1906830; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 11 2 8 4 At2g04160 "subtilisin-like protease (AIR3) almost identical to subtilisin-like protease AIR3 GI:4218991 from [Arabidopsis thaliana], missing 200 aa at N-terminus" 11 2 8 5 At2g04240 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 2 8 6 At2g04430 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain 11 2 8 7 At2g04500 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 2 8 8 At2g04680 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 2 8 9 At2g04790 expressed protein 11 2 8 10 3xSSC 3xSSC 11 2 8 11 At2g11810 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative identical to monogalactosyldiacylglycerol synthase type C [gi:9927295] from Arabidopsis thaliana, similar to MGDG synthase type A [gi:9884651] from Glycine max" 11 2 8 12 At2g12400 expressed protein 11 2 8 13 At2g12610 expressed protein ; expression supported by MPSS 11 2 8 14 At2g13320 expressed protein anf genefinder 11 2 8 15 At2g13430 hypothetical protein 11 2 8 16 At2g13680 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 11 2 8 17 At2g13790 leucine-rich repeat family protein / protein kinase family protein 11 2 8 18 3xSSC 3xSSC 11 2 8 19 At2g17150 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 11 2 8 20 At2g17310 F-box family protein contains F-box domain Pfam:PF00646 11 2 8 21 At2g17380 clathrin assembly protein AP19 identical to clathrin assembly protein AP19 GI:2231698 from [Arabidopsis thaliana] 11 2 8 22 At2g17580 polynucleotide adenylyltransferase family protein similar to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 11 2 8 23 At2g17650 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 2 AMPBP2 (AMPBP2) GI:20799712 11 2 8 24 At2g17787 expressed protein 11 2 8 25 At2g17845 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 11 2 9 1 3xSSC 3xSSC 11 2 9 2 At2g20630 "protein phosphatase 2C, putative / PP2C, putative " 11 2 9 3 At2g20780 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 11 2 9 4 At2g20810 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 11 2 9 5 At2g20930 expressed protein 11 2 9 6 At2g20960 expressed protein pEARLI 4 gene product [Arabidopsis thaliana] GI:871782 11 2 9 7 At2g21150 XAP5 family protein contains Pfam profile: PF04921 XAP5 protein 11 2 9 8 At2g21195 expressed protein 11 2 9 9 3xSSC 3xSSC 11 2 9 10 At2g24070 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 11 2 9 11 At2g24260 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 2 9 12 At2g24310 expressed protein 11 2 9 13 At2g24490 "replication protein, putative similar to replication protein A 30kDa [Oryza sativa (japonica cultivar-group)] GI:13516746; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain" 11 2 9 14 At2g24550 expressed protein weak similarity to MTD1 [Medicago truncatula] GI:9294810 11 2 9 15 At2g24710 "glutamate receptor family protein (GLR2.3) plant glutamate receptor family, PMID:11379626" 11 2 9 16 At2g24790 zinc finger (B-box type) family protein 11 2 9 17 3xSSC 3xSSC 11 2 9 18 At2g27530 60S ribosomal protein L10A (RPL10aB) 11 2 9 19 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 11 2 9 20 At2g27760 tRNA isopentenyltransferase 2 / IPP transferase 2 (IPT2) identical to tRNA isopentenyltransferase (IPT2) [Arabidopsis thaliana] GI:14279058; identical to cDNA tRNA isopentenyl transferase GI:12383201; 11 2 9 21 At2g27920 serine carboxypeptidase S10 family protein similar to retinoid-inducible serine carboxypeptidase precursor (GI:15146429) [Mus musculus] 11 2 9 22 At2g27970 "cyclin-dependent kinase, putative / CDK, putative similar to Cks1 protein [Arabidopsis thaliana] gi|2274859|emb|CAA03859" 11 2 9 23 At2g28120 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 11 2 9 24 At2g28180 "cation/hydrogen exchanger, putative (CHX8) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 2 9 25 3xSSC 3xSSC 11 2 10 1 At2g30960 expressed protein 11 2 10 2 At2g31100 "lipase, putative similar to lipase [Dianthus caryophyllus] GI:4103627; contains Pfam profile PF01764: Lipase (class 3)" 11 2 10 3 At2g31160 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 11 2 10 4 At2g31320 "poly [ADP-ribose] polymerase, putative / NAD(+) ADP-ribosyltransferase, putative / poly[ADP-ribose] synthetase, putative similar to poly(ADP)-ribose polymerase [Zea mays] GI:3928871 ; contains Pfam profiles PF00644: Poly(ADP-ribose) polymerase catalytic domain, PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region, PF02877: Poly(ADP-ribose) polymerase, regulatory domain, PF00533: BRCA1 C Terminus (BRCT) domain" 11 2 10 5 At2g31370 bZIP transcription factor (POSF21) identical to GB:Q04088 11 2 10 6 At2g31540 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 11 2 10 7 At2g31580 expressed protein contains Pfam profile: PF04446 family of unknown function (DUF549) 11 2 10 8 3xSSC 3xSSC 11 2 10 9 At2g34250 "protein transport protein sec61, putative similar to PfSec61 [Plasmodium falciparum] GI:3057044; contains Pfam profile PF00344: eubacterial secY protein" 11 2 10 10 At2g34357 expressed protein 11 2 10 11 At2g34390 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; an isoform contains a non-consensus GA-AG intron 11 2 10 12 At2g34530 expressed protein 11 2 10 13 At2g34585 expressed protein 11 2 10 14 At2g34750 RNA polymerase I specific transcription initiation factor RRN3 family protein contains Pfam PF05327: RNA polymerase I specific transcription initiation factor RRN3; similar to RRN3 (GI:7670100) [Homo sapiens] similar to RNA polymerase I specific transcription initiation factor RRN3 (Swiss-Prot:P36070) [Saccharomyces cerevisiae] 11 2 10 15 At2g34820 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 2 10 16 3xSSC 3xSSC 11 2 10 17 At2g37450 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 11 2 10 18 At2g37610 hypothetical protein 11 2 10 19 At2g37670 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similiar to rab11 binding protein (GI:4512103) [Bos taurus] 11 2 10 20 At2g37820 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 2 10 21 At2g37880 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 11 2 10 22 At2g38040 acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit family contains Pfam profile: PF03255: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 11 2 10 23 At2g38090 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 11 2 10 24 3xSSC 3xSSC 11 2 10 25 At2g40690 "NAD-dependent glycerol-3-phosphate dehydrogenase family protein low similarity to SP|Q26756 Glycerol-3-phosphate dehydrogenase [NAD+], glycosomal (EC 1.1.1.8) {Trypanosoma brucei rhodesiense}; contains Pfam profile PF01210: NAD-dependent glycerol-3-phosphate dehydrogenase" 11 2 11 1 At2g40830 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 2 11 2 At2g40900 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 11 2 11 3 At2g41010 VQ motif-containing protein contains PF05678: VQ motif 11 2 11 4 At2g41070 basic leucine zipper transcription factor (BZIP12) nearly identical to basic leucine zipper transcription factor [Arabidopsis thaliana] GI:21694632; contains a bZIP transcription factor basic domain signature (PDOC00036) 11 2 11 5 At2g41230 expressed protein 11 2 11 6 At2g41280 late embryogenesis abundant protein (M10) / LEA protein M10 identical to GB:AF076979 11 2 11 7 3xSSC 3xSSC 11 2 11 8 At2g43945 expressed protein 11 2 11 9 At2g44060 late embryogenesis abundant family protein / LEA family protein similar to ethylene-responsive late embryogenesis-like protein [Lycopersicon esculentum] GI:1684830; contains Pfam profile PF03168: Late embryogenesis abundant protein 11 2 11 10 At2g44090 expressed protein 11 2 11 11 At2g44250 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 11 2 11 12 At2g44300 lipid transfer protein-related low similarity to lipid transfer protein Picea abies GI:2627141; contains Pfam profile: PF00234: Protease inhibitor/seed storage/LTP family 11 2 11 13 At2g44490 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 11 2 11 14 At2g44525 expressed protein 11 2 11 15 3xSSC 3xSSC 11 2 11 16 At2g47250 "RNA helicase, putative similar to SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43 (Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 11 2 11 17 At2g47420 "dimethyladenosine transferase, putative similar to SP|P41819 Dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF00398: ribosomal RNA adenine dimethylase family protein" 11 2 11 18 At2g47470 thioredoxin family protein similar to protein disulfide isomerase [Dictyostelium discoideum] GI:2627440; contains Pfam profile: PF00085 Thioredoxin 11 2 11 19 At2g47630 "esterase/lipase/thioesterase family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Interpro entry IPR000379" 11 2 11 20 At2g47670 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q42534; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 11 2 11 21 At2g47840 tic20 protein-related similar to Tic20 (GI:3769673) [Pisum sativum] 11 2 11 22 At2g47890 zinc finger (B-box type) family protein 11 2 11 23 3xSSC 3xSSC 11 2 11 24 At3g03260 "homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20, GB:CAB36819" 11 2 11 25 At3g03410 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 11 2 12 1 At3g03470 "cytochrome P450, putative similar to cytochrome P450 89A2 GB:Q42602 [Arabidopsis thaliana]" 11 2 12 2 At3g03650 exostosin family protein contains Pfam profile: PF03016 Exostosin family 11 2 12 3 At3g03710 "polyribonucleotide nucleotidyltransferase, putative similar to polynucleotide phosphorylase GB:AAC50039 [Pisum sativum], identical to putative polynucleotide phosphorylase GB:AAF00646 [Arabidopsis thaliana]" 11 2 12 4 At3g03850 "auxin-responsive protein, putative similar to small auxin-up regulated protein SAUR (GI:3043536) [Raphanus sativus]" 11 2 12 5 At3g03890 expressed protein 11 2 12 6 3xSSC 3xSSC 11 2 12 7 At3g06460 GNS1/SUR4 membrane family protein similar to SP|P25358 Elongation of fatty acids protein 2 (GNS1 protein) (V-SNARE bypass mutant gene 2 protein) {Saccharomyces cerevisiae}; contains Pfam profile PF01151: GNS1/SUR4 family 11 2 12 8 At3g06590 expressed protein 11 2 12 9 At3g06650 "ATP-citrate synthase, putative / ATP-citrate (pro-S-)-lyase, putative / citrate cleavage enzyme, putative strong similarity to ATP:citrate lyase [Capsicum annuum] GI:13160653; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 11 2 12 10 At3g06740 zinc finger (GATA type) family protein 11 2 12 11 At3g06810 "acyl-CoA dehydrogenase-related low similarity to acyl-CoA dehydrogenase [Acinetobacter sp. NCIMB9871] GI:14587418; contains Pfam profiles PF01636: Phosphotransferase enzyme family, PF00441: Acyl-CoA dehydrogenase C-terminal domain, PF02770: Acyl-CoA dehydrogenase middle domain" 11 2 12 12 At3g06970 "RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 11 2 12 13 At3g07020 UDP-glucose:sterol glucosyltransferase (UGT80A2) identical to UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] GI:2462931; contains Pfam profile: PF03033 glycosyltransferase family 28 N-terminal domain 11 2 12 14 3xSSC 3xSSC 11 2 12 15 At3g10113 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 11 2 12 16 At3g10260 reticulon family protein weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon; identical to cDNA GI:32331854 11 2 12 17 At3g10300 calcium-binding EF hand family protein low similarity to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 11 2 12 18 At3g10460 self-incompatibility protein-related similar to self-incompatibility [Papaver nudicaule] GI:3097262 11 2 12 19 At3g10490 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 11 2 12 20 At3g10630 "glycosyl transferase family 1 protein contains Pfam glycosyl transferase, group 1 family protein domain PF00534; C-terminal portion similar to mannosyltransferase GB:BAA28328 [Escherichia coli]" 11 2 12 21 At3g10670 ABC transporter family protein similar to ABC transporter ATPase GB:AAC68280 [Chlamydia trachomatis] 11 2 12 22 3xSSC 3xSSC 11 2 12 23 At3g13160 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 2 12 24 At3g13240 hypothetical protein 11 2 12 25 At3g13290 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens] and autoantigen locus HSU17474 (GI:596134) [Homo sapiens] 11 2 13 1 At3g13450 2-oxoisovalerate dehydrogenase / 3-methyl-2-oxobutanoate dehydrogenase / branched-chain alpha-keto acid dehydrogenase E1 beta subunit (DIN4) identical to branched chain alpha-keto acid dehydrogenase E1 beta subunit [Arabidopsis thaliana] GI:7021286 11 2 13 2 At3g13510 expressed protein Pfam profile PF03080: Arabidopsis proteins of unknown function 11 2 13 3 At3g13662 disease resistance-responsive protein-related / dirigent protein-related similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355; similar to dirigent protein [Forsythia x intermedia] gi|6694695|gb|AAF25358 11 2 13 4 At3g13677 expressed protein ; expression supported by MPSS 11 2 13 5 3xSSC 3xSSC 11 2 13 6 At3g16190 isochorismatase hydrolase family protein low similarity to SP|P32400 N-carbamoylsarcosine amidase (EC 3.5.1.59) (N-carbamoylsarcosine amidohydrolase) {Arthrobacter sp}; contains Pfam profile PF00857: isochorismatase family protein 11 2 13 7 At3g16370 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 Lipase Acylhydrolase with GDSL-like motif" 11 2 13 8 At3g16450 jacalin lectin family protein similar to SP|Q9SAV1 Myrosinase binding protein-like At1g52030 {Arabidopsis thaliana}; contains Pfam profile: PF01419 jacalin-like lectin domain 11 2 13 9 At3g16565 alanyl-tRNA synthetase-related low similarity to SP|Q56273 Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) {Thiobacillus ferrooxidans} 11 2 13 10 At3g16620 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 11 2 13 11 At3g16780 60S ribosomal protein L19 (RPL19B) similar to ribosomal protein L19 GB:CAA45090 from [Homo sapiens] 11 2 13 12 At3g16840 "DEAD/DEAH box helicase, putative (RH13) similar to RNA helicase GB:CAA09204 from [Arabidopsis thaliana]; identical to cDNA DEAD box RNA helicase, RH13 GI:3776002" 11 2 13 13 3xSSC 3xSSC 11 2 13 14 At3g19516 hypothetical protein 11 2 13 15 At3g19660 expressed protein 11 2 13 16 At3g19720 dynamin family protein identical to cDNA dynamin-like protein (ARC5) GI: 30349145; contains Pfam profile PF00350: Dynamin family 11 2 13 17 At3g19895 expressed protein 11 2 13 18 At3g19950 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 2 13 19 At3g20090 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 11 2 13 20 At3g20150 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 11 2 13 21 3xSSC 3xSSC 11 2 13 22 At3g22920 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to peptidyl-prolyl cis-trans isomerase PPIase (cyclophilin, cyclosporin A-binding protein) [Tomato] SWISS-PROT:P21568" 11 2 13 23 At3g23070 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 11 2 13 24 At3g23130 "superman protein (SUP) / zinc finger (C2H2 type) family protein identical to superman protein GB:S60325 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 2 13 25 At3g23280 "zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) and Pfam profile: PF00023 ankyrin repeat" 11 2 14 1 At3g23320 hypothetical protein 11 2 14 2 At3g23510 "cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profile PF02353: Cyclopropane-fatty-acyl-phospholipid synthase" 11 2 14 3 At3g23580 ribonucleoside-diphosphate reductase small chain / ribonucleotide reductase nearly identical to SP|P50651 Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase) (R2 subunit) {Arabidopsis thaliana} 11 2 14 4 3xSSC 3xSSC 11 2 14 5 At3g26460 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 11 2 14 6 At3g26616 hypothetical protein 11 2 14 7 At3g26660 "LOB domain protein, putative / lateral organ boundaries domain protein, putative (LBD24) identical to SP|P59468 Putative LOB domain protein 24 {Arabidopsis thaliana}" 11 2 14 8 At3g26770 short-chain dehydrogenase/reductase (SDR) family protein similar to sex determination protein tasselseed 2 SP:P50160 from [Zea mays] 11 2 14 9 At3g26830 "cytochrome P450 71B15, putative (CYP71B15) Identical to Cytochrome P450 (SP:Q9LW27) [Arabidopsis thaliana]; similar to cytochrome P450 71B2 GB:O65788 [Arabidopsis thaliana]" 11 2 14 10 At3g26950 expressed protein 11 2 14 11 At3g27020 oligopeptide transporter OPT family protein similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein 11 2 14 12 3xSSC 3xSSC 11 2 14 13 At3g30160 hypothetical protein similar to hypothetical protein GB:CAB55689 GI:5881771 from [Arabidopsis thaliana] 11 2 14 14 At3g30370 hypothetical protein 11 2 14 15 At3g30450 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At4g03990, At5g34895, At3g47270, At2g02200" 11 2 14 16 At3g30650 expressed protein 11 2 14 17 At3g30720 expressed protein 11 2 14 18 At3g31300 hypothetical protein 11 2 14 19 At3g31400 hypothetical protein 11 2 14 20 3xSSC 3xSSC 11 2 14 21 At3g44730 "kinesin motor protein-related similar to 4 other kinesin-like proteins of A. thaliana: F02P16.12 (PID:g2191180), katA (D11371), katB (D21137), and katC (D21138); contains non-consensus AT-AC splice sites at intron 10" 11 2 14 22 At3g44870 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 11 2 14 23 At3g44930 "cation/hydrogen exchanger, putative (CHX10) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 2 14 24 At3g45090 2-phosphoglycerate kinase-related contains weak similarity to 2-phosphoglycerate kinase (GI:467751) [Methanothermus fervidus] 11 2 14 25 At3g45130 "cycloartenol synthase, putative / 2,3-epoxysqualene--cycloartenol cyclase, putative / (S)-2,3-epoxysqualene mutase, putative 77% similar to cycloartenol synthase [SP|P38605|gi:452446] [PMID: 7505443]; oxidosqualene cyclase LcOSC2 - Luffa cylindrica, EMBL:AB033335" 11 2 15 1 At3g45330 "lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, Prosite:PS00108; contains Pfam profiles PF00069: Protein kinase domain, PF00139: Legume lectins beta domain, PF00138: Legume lectins alpha domain" 11 2 15 2 At3g45400 exostosin family protein contains Pfam profile: PF03016 Exostosin family 11 2 15 3 3xSSC 3xSSC 11 2 15 4 At3g48270 "cytochrome P450 71A26, putative (CYP71A26) identical to Cytochrome P450 71A26 (SP:Q9STK7) {Arabidopsis thaliana}" 11 2 15 5 At3g48440 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 11 2 15 6 At3g48500 expressed protein 11 2 15 7 At3g48680 "bacterial transferase hexapeptide repeat-containing protein contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats); ferripyochelin binding protein - Methanobacterium thermoautotrophicum, EMBL:AE000918.1" 11 2 15 8 At3g48740 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 11 2 15 9 At3g48900 "single-strand DNA endonuclease, putative similar to single-strand DNA endonuclease-1 [Oryza sativa (japonica cultivar-group)] gi|16923283|dbj|BAB72003" 11 2 15 10 At3g48960 "60S ribosomal protein L13 (RPL13C) 60S ribosomal protein L13 (BBC1), Arabidopsis thaliana, gb:X75162" 11 2 15 11 3xSSC 3xSSC 11 2 15 12 At3g51870 "mitochondrial substrate carrier family protein peroxisomal Ca-dependent solute carrier - Oryctolagus cuniculus, EMBL:AF004161" 11 2 15 13 At3g52010 serine carboxypeptidase S10 family protein similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase 11 2 15 14 At3g52050 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 11 2 15 15 At3g52180 "protein tyrosine phosphatase/kinase interaction sequence protein (PTPKIS1) identical to PTPKIS1 protein [Arabidopsis thaliana] GI:11595504; contains Pfam profile PF00782: Dual specificity phosphatase, catalytic domain" 11 2 15 16 At3g52240 expressed protein 11 2 15 17 At3g52390 tatD-related deoxyribonuclease family protein similar to SP|P27859 Deoxyribonuclease tatD (EC 3.1.21.-) (DNAse tatD) {Escherichia coli}; contains Pfam profile PF01026: TatD related DNase 11 2 15 18 At3g52450 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 11 2 15 19 3xSSC 3xSSC 11 2 15 20 At3g55010 "phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) identical to phosphoribosylformylglycinamidine cyclo-ligase, chloroplast precursor SP:Q05728 from [Arabidopsis thaliana]; contains Pfam profiles: PF02769 AIR synthase related protein, C-terminal domain, PF00586 AIR synthase related protein, N-terminal domain" 11 2 15 21 At3g55170 60S ribosomal protein L35 (RPL35C) various ribosomal L35 proteins 11 2 15 22 At3g55230 disease resistance-responsive family protein low similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 11 2 15 23 At3g55410 "2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to SP|P20967 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) {Saccharomyces cerevisiae}; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF00676: Dehydrogenase E1 component" 11 2 15 24 At3g55470 C2 domain-containing protein similar to phloem protein GI:4164539 from [Cucurbita maxima] 11 2 15 25 At3g55650 "pyruvate kinase, putative simlar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 11 2 16 1 At3g55710 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 2 16 2 3xSSC 3xSSC 11 2 16 3 At3g58620 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 11 2 16 4 At3g58790 "glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8; general stress protein gspA, Bacillus subtilis, PIR:S16423" 11 2 16 5 At3g58850 "expressed protein predicted proteins, Arabidopsis thaliana" 11 2 16 6 At3g59030 "transparent testa 12 protein (TT12) / multidrug transporter-like protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296, putative multidrug efflux protein NorM - Vibrio parahaemolyticus, EMBL:AB010463; contains Pfam profile PF01554: Uncharacterized membrane protein family; identical to cDNA multidrug transporter-like protein (tt12) GI:13624642, SP|Q9LYT3 TRANSPARENT TESTA 12 protein {Arabidopsis thaliana}, multidrug transporter-like protein [Arabidopsis thaliana] GI:13624643" 11 2 16 7 At3g59080 "aspartyl protease family protein contains similarity to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]; contains Pfam profile PF00026: Eukaryotic aspartyl protease" 11 2 16 8 At3g59240 F-box family protein contains F-box domain Pfam:PF00646 11 2 16 9 At3g59300 "expressed protein hypothetical protein T2J13.20 - Arabidopsis thaliana, PIR:T46116" 11 2 16 10 3xSSC 3xSSC 11 2 16 11 At3g62010 expressed protein 11 2 16 12 At3g62170 "pectinesterase family protein contains Pfam profiles: PF01095 pectinesterase, PF04043 plant invertase/pectin methylesterase inhibitor ;similar to pollen-specific pectin esterase GI:1620652 from [Brassica rapa subsp. pekinensis]" 11 2 16 13 At3g62230 F-box family protein contains Pfam:PF00646 F-box domain 11 2 16 14 At3g62400 "expressed protein cytochrome c oxidase subunit 5c - Oryza sativa, EMBL:AB027123" 11 2 16 15 At3g62450 expressed protein 11 2 16 16 At3g62640 expressed protein 11 2 16 17 At3g62680 "proline-rich family protein contains proline-rich region, INTERPRO:IPR000694" 11 2 16 18 3xSSC 3xSSC 11 2 16 19 At4g01610 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase GI:609175 from [Nicotiana rustica]; contains an unusually short, 5nt exon" 11 2 16 20 At4g01750 expressed protein T15B16.8 11 2 16 21 At4g01810 protein transport protein-related related to Sec23 protein [Homo sapiens] gi|1296664|emb|CAA65774 11 2 16 22 At4g01935 expressed protein 11 2 16 23 At4g01985 expressed protein 11 2 16 24 At4g02130 "glycosyl transferase family 8 protein low similarity to lgtC of Neisseria sp., GenBank accession number U14554, U65788; contains Pfam glycosyl transferase family 8 domain PF01501" 11 2 16 25 At4g02190 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 2 17 1 3xSSC 3xSSC 11 2 17 2 At4g05160 "4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative similar to 4CL2 [gi:12229665] from Arabidopsis thaliana, 4CL1 [gi:12229631] from Nicotiana tabacum; contains Pfam AMP-binding enzyme domain PF00501; acyl-activating enzyme superfamily; identical to cDNA 4-coumarate-CoA ligase-like protein (At4g05160) GI:29893226" 11 2 17 3 At4g05330 "zinc finger and C2 domain protein, putative similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana]" 11 2 17 4 At4g05390 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751" 11 2 17 5 At4g05580 hypothetical protein 11 2 17 6 At4g05631 hypothetical protein 11 2 17 7 At4g06740 hypothetical protein 11 2 17 8 At4g07350 hypothetical protein 11 2 17 9 3xSSC 3xSSC 11 2 17 10 At4g10590 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 11 2 17 11 At4g10750 "HpcH/HpaI aldolase family protein similar to 2,4-dihydroxydec-2-ene-1,10-dioic acid aldolase [Sphingopyxis macrogoltabida] GI:23330203; contains Pfam profile PF03328: HpcH/HpaI aldolase family" 11 2 17 12 At4g10810 expressed protein 11 2 17 13 At4g10940 "PHD finger family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 11 2 17 14 At4g10970 expressed protein 11 2 17 15 At4g11150 vacuolar ATP synthase subunit E / V-ATPase E subunit / vacuolar proton pump E subunit (VATE) identical to SP|Q39258 Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) {Arabidopsis thaliana} 11 2 17 16 At4g11200 hypothetical protein contains weak hit to Pfam profile PF03108: MuDR family transposase 11 2 17 17 3xSSC 3xSSC 11 2 17 18 At4g13985 F-box family protein contains F-box domain Pfam:PF00646 11 2 17 19 At4g14140 DNA (cytosine-5-)-methyltransferase (METII) nearly identical to cytosine-5 methyltransferase (METII) [Arabidopsis thaliana] GI:6523846 11 2 17 20 At4g14165 "F-box family protein-related similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 11 2 17 21 At4g14310 peroxisomal membrane protein-related contains weak similarity to Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) (Swiss-Prot:P42925) [Mus musculus] 11 2 17 22 At4g14342 "pre-mRNA splicing factor 10 kDa subunit, putative similar to Splicing factor 3B subunit 10 (SF3b10) (Pre-mRNA splicing factor SF3b 10 kDa subunit) (Swiss-Prot:Q9BWJ5) [Homo sapiens]; Conserved in Plasmodium, yeast, fly, mouse, human" 11 2 17 23 At4g14455 Bet1-like SNARE 1-2 / Bet1 / Sft1-like SNARE 14b / BS14b (BET12) identical to Bet1/Sft1-like SNARE BS14b (GP|14029182) {Arabidopsis thaliana} 11 2 17 24 At4g14520 DNA-directed RNA polymerase II-related contains similarity to Swiss-Prot:P38421 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) [Arabidopsis thaliana] 11 2 17 25 3xSSC 3xSSC 11 2 18 1 At4g16940 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 18 2 At4g17070 expressed protein 11 2 18 3 At4g17140 pleckstrin homology (PH) domain-containing protein contains Pfam profile PF00169: PH domain 11 2 18 4 At4g17280 auxin-responsive family protein similar to auxin-induced protein AIR12 (GI:11357190) [Arabidopsis thaliana] 11 2 18 5 At4g17360 "formyltetrahydrofolate deformylase, putative similar to formyltetrahydrofolate deformylase [strain PCC 6803- Synechocystis sp.] SWISS-PROT:Q55135" 11 2 18 6 At4g17530 "Ras-related GTP-binding protein, putative very strong similarity to RAB1C [Lotus corniculatus var. japonicus] GI:1370166; contains Pfam profile PF00071: Ras family" 11 2 18 7 At4g17580 Bax inhibitor-1 family protein / BI-1 family protein similar to SP|Q9LD45 Bax inhibitor-1 (BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam profile PF01027: Uncharacterized protein family UPF0005 11 2 18 8 3xSSC 3xSSC 11 2 18 9 At4g20210 "terpene synthase/cyclase family protein (+)-delta-cadinene synthase isozyme XC14, Gossypiumarboreum, PIR2:S68366" 11 2 18 10 At4g20380 zinc finger protein (LSD1) identical to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660 11 2 18 11 At4g20430 subtilase family protein contains Pfam profile: PF00082 subtilase family 11 2 18 12 At4g20715 hypothetical protein 11 2 18 13 At4g20780 "calcium-binding protein, putative similar to SP|Q09011 Calcium-binding protein CAST {Solanum tuberosum}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 11 2 18 14 At4g20960 cytidine/deoxycytidylate deaminase family protein similar to SP|P25539 Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5- phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] {Escherichia coli}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 11 2 18 15 At4g21020 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to SP|P23283 Desiccation-related protein {Craterostigma plantagineum}; contains Pfam profile PF02987: Late embryogenesis abundant protein 11 2 18 16 3xSSC 3xSSC 11 2 18 17 At4g23650 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Marchantia polymorpha] gi|5162877|dbj|BAA81748; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 11 2 18 18 At4g23810 "WRKY family transcription factor AR411 - Arabidopsis thaliana (thale cress), PID:g1669603" 11 2 18 19 At4g23880 expressed protein 11 2 18 20 At4g24010 "cellulose synthase family protein similar to Zea mays cellulose synthase-5 [gi:9622882], -4 [gi:9622880]" 11 2 18 21 At4g24060 "Dof-type zinc finger domain-containing protein Dof zinc finger protein - Oryza sativa,PID:d1042342" 11 2 18 22 At4g24220 "expressed protein protein induced upon wounding - Arabidopsis thaliana, PID:e257749" 11 2 18 23 At4g24270 RNA recognition motif (RRM)-containing protein low similarity to tumor-rejection antigen SART3 [Mus musculus] GI:7637845; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 11 2 18 24 3xSSC 3xSSC 11 2 18 25 At4g26880 "stigma-specific Stig1 family protein similar to stigma-specific protein STIG1 [Nicotiana tabacum] GI:496647; contains Pfam profile PF04885: Stigma-specific protein, Stig1" 11 2 19 1 At4g27020 "expressed protein gene F20P5.12 of BAC F20P5 from Arabidopsis thalianachromosome 1, PID:g2194125" 11 2 19 2 At4g27080 thioredoxin family protein contains Pfam PF00085: Thioredoxin 11 2 19 3 At4g27260 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 11 2 19 4 At4g27320 "universal stress protein (USP) family protein low similarity to ER6 protein [Lycopersicon esculentum] GI:5669654, early nodulin ENOD18 [Vicia faba] GI:11602747; contains Pfam profile PF00582: universal stress protein family" 11 2 19 5 At4g27480 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 11 2 19 6 At4g27540 prenylated rab acceptor (PRA1) protein-related contains Pfam profile PF03208: PRA1 family protein 11 2 19 7 3xSSC 3xSSC 11 2 19 8 At4g30170 "peroxidase, putative identical to peroxidase ATP8a [Arabidopsis thaliana] gi|1546706|emb|CAA67361" 11 2 19 9 At4g30310 "ribitol kinase, putative similar to ribitol kinase [Klebsiella pneumoniae] gi|2905643|gb|AAC26495" 11 2 19 10 At4g30370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 2 19 11 At4g30510 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); similar to several hypothetical proteins 11 2 19 12 At4g30560 "cyclic nucleotide-regulated ion channel, putative similar to cyclic nucleotide and calmodulin-regulated ion channel cngc6 GI:4581207 from [Arabidopsis thaliana]" 11 2 19 13 At4g30730 hypothetical protein 11 2 19 14 At4g30770 hypothetical protein 11 2 19 15 3xSSC 3xSSC 11 2 19 16 At4g33320 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 11 2 19 17 At4g33495 expressed protein 11 2 19 18 At4g33530 "potassium transporter family protein similar to K+ transporter HAK5 [Arabidopsis thaliana] GI:7108597; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 11 2 19 19 At4g33680 "aminotransferase class I and II family protein low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii GP|14278621; contains Pfam profile PF00155 aminotransferase, classes I and II" 11 2 19 20 At4g33740 expressed protein 11 2 19 21 At4g33900 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 11 2 19 22 At4g33940 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 2 19 23 AT5G57480 PC-1 B02 11 2 19 24 3XSSC PC-1 B14 11 2 19 25 AT1G29930 PC-1 F02 11 2 20 1 3XSSC PC-1 F14 11 2 20 2 AT3G44150 PC-1 J02 11 2 20 3 3XSSC PC-1 J14 11 2 20 4 AT4G00810 PC-1 N02 11 2 20 5 3XSSC PC-1 N14 11 2 20 6 3xSSC 3xSSC 11 2 20 7 At4g36540 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 11 2 20 8 At4g36690 "U2 snRNP auxiliary factor large subunit, putative similar to U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] GI:3850823" 11 2 20 9 At4g36730 G-box binding factor 1 (GBF1) identical to G-box binding factor 1 SP:P42774 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 11 2 20 10 At4g36880 "cysteine proteinase, putative strong similarity to cysteine proteinase COT44 precursor SP:P25251 from [Brassica napus] (Rape)" 11 2 20 11 At4g36930 basic helix-loop-helix (bHLH) protein SPATULA (SPT) identical to SPATULA (SPT) GI:11245493 from [Arabidopsis thaliana] 11 2 20 12 At4g37120 expressed protein 11 2 20 13 At4g37180 "myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain" 11 2 20 14 3xSSC 3xSSC 11 2 20 15 At4g39820 expressed protein 11 2 20 16 At4g39970 haloacid dehalogenase-like hydrolase family protein low similarity to SP|P95649 CbbY protein {Rhodobacter sphaeroides} 11 2 20 17 At4g40030 "histone H3.2 identical to Histone H3.2, minor Lolium temulentum SP|P11105, nearly identical to histone H3.2 Mus pahari GI:515005; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 11 2 20 18 At5g01060 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 11 2 20 19 At5g01110 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 11 2 20 20 At5g01250 "alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162]; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif" 11 2 20 21 At5g01300 phosphatidylethanolamine-binding family protein similar to cold-regulated protein [Hordeum vulgare subsp. vulgare] GI:10799810; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 11 2 20 22 3xSSC 3xSSC 11 2 20 23 At5g04060 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 11 2 20 24 At5g04230 phenylalanine ammonia-lyase 3 (PAL3) nearly identical to SP|P45725 11 2 20 25 At5g04290 KOW domain-containing transcription factor family protein 11 2 21 1 At5g04470 expressed protein 11 2 21 2 At5g04530 "beta-ketoacyl-CoA synthase family protein KCS1 fatty acid elongase 3-ketoacyl-CoA synthase 1, Arabidopsis thaliana, EMBL:AF053345" 11 2 21 3 At5g04720 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 21 4 At5g04780 "SEC14 cytosolic factor-related contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; contains Pfam profile PF01535: PPR repeat (three copies)" 11 2 21 5 3xSSC 3xSSC 11 2 21 6 At5g07360 amidase family protein low similarity to enantiomerase-selective amidase [Rhodococcus sp.] GI:152052; contains Pfam profile PF01425: Amidase 11 2 21 7 At5g07520 glycine-rich protein (GRP18) Oleosin; glycine-rich protein 18 (GRP18) PMID:11431566; 11 2 21 8 At5g07580 ethylene-responsive element-binding family protein contains similarity to ethylene responsive element binding factor 5 (AtERF5) (Swiss-Prot:O80341) [Arabidopsis thaliana]; contains Pfam PF00847: AP2 domain 11 2 21 9 At5g07770 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 11 2 21 10 At5g07830 glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase GI:8918740 from [Scutellaria baicalensis] 11 2 21 11 At5g08010 "expressed protein condensin subunit SMC4, Drosophila melanogaster, EMBL:AF186472" 11 2 21 12 At5g08070 "TCP family transcription factor, putative similar to TFPD (GI:6681577) [Arabidopsis thaliana] ; putative basic helix-loop-helix DNA binding protein TCP2 - Arabidopsis thaliana, EMBL:AF072691" 11 2 21 13 3xSSC 3xSSC 11 2 21 14 At5g11150 "synaptobrevin / vesicle-associated membrane protein 713 (VAMP713) identified as AtVAMP713 by Sanderfoot, A.A., et al. in Plant Physiol. 124: 1558-69 (2000); similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like protein Sybl1, Mus musculus, EMBL:MMU133536" 11 2 21 15 At5g11310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 2 21 16 At5g11360 expressed protein 11 2 21 17 At5g11540 FAD-binding domain-containing protein similar to hypothetical protein [Oryza sativa (japonica)][GI:18844891]; contains PF01565 FAD binding domain 11 2 21 18 At5g11600 expressed protein 11 2 21 19 At5g11760 expressed protein 11 2 21 20 At5g11820 "expressed protein self-incompatibility protein S3 precursor, Papaver rhoeas cv., PIR:S69186" 11 2 21 21 3xSSC 3xSSC 11 2 21 22 At5g15020 paired amphipathic helix repeat-containing protein similar to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat 11 2 21 23 At5g15190 expressed protein 11 2 21 24 At5g15240 "amino acid transporter family protein low similarity to amino acid transporter system A3 [Homo sapiens] GI:13876616; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 11 2 21 25 At5g15420 expressed protein 11 2 22 1 At5g15460 expressed protein 11 2 22 2 At5g15610 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 11 2 22 3 At5g15670 F-box family protein contains F-box domain Pfam:PF00646 11 2 22 4 3xSSC 3xSSC 11 2 22 5 At5g18370 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 22 6 At5g18510 hypothetical protein 11 2 22 7 At5g18560 "AP2 domain-containing transcription factor, putative AP2/EREBP-like transcription factor LEAFY PETIOLE, Arabidopsis thaliana, EMBL:AF216581" 11 2 22 8 At5g18690 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family member: At3g06360 [Arabidopsis thaliana]" 11 2 22 9 At5g18750 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 11 2 22 10 At5g18900 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 11 2 22 11 At5g18940 Mo25 family protein similar to SP|Q06138 MO25 protein {Mus musculus}; contains Pfam profile PF03204: Mo25 protein family 11 2 22 12 3xSSC 3xSSC 11 2 22 13 At5g22330 TATA box-binding protein-interacting protein-related similar to TATA box-binding protein-interacting protein SP:O35753 from [ Mus musculus] 11 2 22 14 At5g22500 "acyl CoA reductase, putative / male-sterility protein, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein; identical to cDNA male sterility 2-like protein GI:1491614" 11 2 22 15 At5g22550 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 11 2 22 16 At5g22690 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 22 17 At5g22750 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 2 22 18 At5g22900 "cation/hydrogen exchanger, putative (CHX3) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 2 22 19 At5g22960 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase III [Precursor] (SP:P37891) [Oryza sativa] 11 2 22 20 3xSSC 3xSSC 11 2 22 21 At5g25600 hypothetical protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 11 2 22 22 At5g25840 expressed protein 11 2 22 23 At5g25900 "ent-kaurene oxidase, putative (GA3) / cytochrome P450 identical to GA3 [Arabidopsis thaliana] GI:3342249; similar to ent-kaurene oxidase [Cucurbita maxima] GI:11934675; contains Pfam profile PF00067: Cytochrome P450" 11 2 22 24 At5g26050 hypothetical protein 11 2 22 25 At5g26110 expressed protein 11 2 23 1 At5g26270 expressed protein ; expression supported by MPSS 11 2 23 2 At5g26330 "plastocyanin-like domain-containing protein / mavicyanin, putative similar to mavicyanin SP:P80728 from [Cucurbita pepo]" 11 2 23 3 3xSSC 3xSSC 11 2 23 4 At5g32605 hypothetical protein 11 2 23 5 At5g33355 expressed protein 11 2 23 6 At5g33406 hAT dimerisation domain-containing protein low similarity to transposase [Fusarium oxysporum f. sp. lycopersici] GI:3126916; contains Pfam profile PF05699: hAT family dimerisation domain 11 2 23 7 At5g34870 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 11 2 23 8 At5g34900 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At3g29210, At2g02210, At3g32900" 11 2 23 9 At5g35110 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 2 23 10 At5g35200 "epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein short form, Rattus norvegicus, EMBL:AF041373;similar to Chain A, Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2 Complex (GP:13399999) {Homo sapiens}" 11 2 23 11 3xSSC 3xSSC 11 2 23 12 At5g38390 F-box family protein contains F-box domain Pfam:PF00646 11 2 23 13 At5g38560 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 2 23 14 At5g38600 "proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein contains Pfam domains PF00098: Zinc knuckle, PF04046: PSP" 11 2 23 15 At5g38780 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292], caffeine synthase [Camellia sinensis][GI:9967143], SAM:benzoic acid carboxyl methyltransferase [Antirrhinum majus][GI:9789277]" 11 2 23 16 At5g38840 forkhead-associated domain-containing protein / FHA domain-containing protein related to adaptor protein kanadaptin [Homo sapiens] gi|13562130|gb|AAK29177 11 2 23 17 At5g39000 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 2 23 18 At5g39080 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 11 2 23 19 3xSSC 3xSSC 11 2 23 20 At5g41980 expressed protein 11 2 23 21 At5g42120 lectin protein kinase family protein contains Pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain 11 2 23 22 At5g42180 peroxidase 64 (PER64) (P64) (PRXR4) identical to SP|Q43872 Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) {Arabidopsis thaliana} 11 2 23 23 At5g42340 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200, GI:14582198; contains Pfam profiles PF04564: U-box domain, PF00514: Armadillo/beta-catenin-like repeat" 11 2 23 24 At5g42400 SET domain-containing protein (TXR7) contains Pfam profile PF00856: SET domain 11 2 23 25 At5g42590 "cytochrome P450 71A16, putative (CYP71A16) Identical to Cytochrome P450 71A16 (SP:Q9FH66) [Arabidopsis thaliana]" 11 2 24 1 At5g42640 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 2 24 2 3xSSC 3xSSC 11 2 24 3 At5g45260 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 2 24 4 At5g45370 nodulin-related / integral membrane family protein contains Pfam profile:PF00892 integral membrane protein DUF6 11 2 24 5 At5g45430 "protein kinase, putative contains similarity to male germ cell-associated kinase [Homo sapiens] gi|23268497|gb|AAN16405" 11 2 24 6 At5g45595 hypothetical protein 11 2 24 7 At5g45630 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 11 2 24 8 At5g45775 60S ribosomal protein L11 (RPL11D) 11 2 24 9 At5g45830 expressed protein low similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423 11 2 24 10 3xSSC 3xSSC 11 2 24 11 At5g48480 expressed protein 11 2 24 12 At5g48630 "cyclin family protein similar to SP|P55168 Cyclin C {Gallus gallus}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 11 2 24 13 At5g48657 defense protein-related weak similarity to SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis thaliana} 11 2 24 14 At5g48820 kip-related protein 3 (KRP3) / cyclin-dependent kinase inhibitor 3 (ICK3) identical to cyclin-dependent kinase inhibitor 3 (krp3) [Arabidopsis thaliana] GI:14422289 11 2 24 15 At5g48880 acetyl-CoA C-acyltransferase 1 / 3-ketoacyl-CoA thiolase 1 (PKT1) identical to 3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana] GI:3169568 11 2 24 16 At5g49030 "tRNA synthetase class I (I, L, M and V) family protein similar to SP|P41972 Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) {Staphylococcus aureus}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 11 2 24 17 At5g49090 hypothetical protein 11 2 24 18 3xSSC 3xSSC 11 2 24 19 At5g51870 MADS-box protein (AGL71) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 11 2 24 20 At5g52030 TraB protein-related 11 2 24 21 At5g52070 agenet domain-containing protein contains Pfam PF05641: Agenet domain 11 2 24 22 At5g52240 cytochrome b5 domain-containing protein similar to SP|P70580 Membrane associated progesterone receptor component 1 {Rattus norvegicus}; contains Pfam profile PF00173: Heme/Steroid binding domain 11 2 24 23 At5g52300 low-temperature-responsive 65 kD protein (LTI65) / desiccation-responsive protein 29B (RD29B) nearly identical to SP|Q04980 Low-temperature-induced 65 kDa protein (Desiccation-responsive protein 29B) {Arabidopsis thaliana} 11 2 24 24 At5g52480 "leucine-rich repeat protein, N7-related contains PF00560: Leucine Rich Repeat; similar to F-box protein Fbl2 (GI:6164721) [Homo sapiens]" 11 2 24 25 At5g52540 expressed protein contains PF05684: Protein of unknown function (DUF819) 11 2 25 1 3xSSC 3xSSC 11 2 25 2 At5g55240 "caleosin-related family protein / embryo-specific protein, putative strong similarity to embryo-specific protein 1 [Arabidopsis thaliana] GI:3335169; contains Pfam profile PF05042: Caleosin related protein" 11 2 25 3 At5g55420 hypothetical protein 11 2 25 4 At5g55480 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to Glycerophosphoryl diester phosphodiesterase precursor (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (ImmunoglobulinD-binding protein) (IGD-binding protein) (SP:Q06282) {Haemophilus influenzae} 11 2 25 5 At5g55620 expressed protein similar to unknown protein (gb|AAF04428.1) 11 2 25 6 At5g55670 RNA recognition motif (RRM)-containing protein 11 2 25 7 At5g55850 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 11 2 25 8 At5g55900 sucrase-related similar to sucrase [Solanum tuberosum] GI:1200257 11 2 25 9 3xSSC 3xSSC 11 2 25 10 At5g58560 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 11 2 25 11 At5g58710 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative (ROC7) similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401" 11 2 25 12 At5g58770 "dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative similar to GI:796076" 11 2 25 13 At5g58930 expressed protein contains Pfam PF05340: Protein of unknown function (DUF740) 11 2 25 14 At5g58970 uncoupling protein (UCP2) identical to uncoupling protein GI:4063007 from [Arabidopsis thaliana] 11 2 25 15 At5g59120 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo]; non-consensus AA acceptor site at exon 6 11 2 25 16 At5g59160 serine/threonine protein phosphatase PP1 isozyme 2 (TOPP2) identical to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana} 11 2 25 17 3xSSC 3xSSC 11 2 25 18 At5g61830 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 11 2 25 19 At5g62020 "heat shock factor protein, putative (HSF6) / heat shock transcription factor, putative (HTSF6) identical to heat shock transcription factor 6 (HSF6) SP: Q9SCW4 from [Arabidopsis thaliana] ;contains Pfam profile: PF00447 HSF-type DNA-binding domain" 11 2 25 20 At5g62080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to tapetum-specific protein a9 precursor {Brassica napus} SP|Q05772; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234; supported by full-length cDNA Ceres:27795 11 2 25 21 At5g62230 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 11 2 25 22 At5g62290 nucleotide-sensitive chloride conductance regulator (ICln) family protein contains PF03517: Nucleotide-sensitive chloride conductance regulator (ICln) 11 2 25 23 At5g62470 myb family transcription factor (MYB96) contains Pfam profile: PF00249 myb-like DNA-binding domain 11 2 25 24 At5g62510 F-box family protein contains Pfam profile: PF00646 F-box domain 11 2 25 25 3xSSC 3xSSC 11 2 26 1 At5g65110 acyl-CoA oxidase (ACX2) identical to acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212 11 2 26 2 At5g65250 expressed protein 11 2 26 3 At5g65310 homeobox-leucine zipper protein 5 (HB-5) / HD-ZIP transcription factor 5 identical to homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein ATHB-5) (SP:P46667) [Arabidopsis thaliana] 11 2 26 4 At5g65470 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 11 2 26 5 At5g65520 expressed protein 11 2 26 6 At5g65690 "phosphoenolpyruvate carboxykinase [ATP], putative / PEP carboxykinase, putative / PEPCK, putative similar to phosphoenolpyruvate carboxykinase [Lycopersicon esculentum] GI:16950587, SP|Q9SLZ0 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) {Zea mays}; contains Pfam profile PF01293: phosphoenolpyruvate carboxykinase" 11 2 26 7 At5g65730 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endo-xyloglucan transferase GI:2244732 from [Gossypium hirsutum]" 11 2 26 8 3xSSC 3xSSC 11 2 26 9 ath-MIR172d miRNA gene Arabidopsis thaliana miR172d stem-loop 11 2 26 10 ath-MIR169h miRNA gene Arabidopsis thaliana miR169h stem-loop 11 2 26 11 ath-MIR393a miRNA gene Arabidopsis thaliana miR393a stem-loop 11 2 26 12 3xSSC 3xSSC 11 2 26 13 3xSSC 3xSSC 11 2 26 14 3xSSC 3xSSC 11 2 26 15 3xSSC 3xSSC 11 2 26 16 3xSSC 3xSSC 11 2 26 17 At3g44730 "kinesin motor protein-related similar to 4 other kinesin-like proteins of A. thaliana: F02P16.12 (PID:g2191180), katA (D11371), katB (D21137), and katC (D21138); contains non-consensus AT-AC splice sites at intron 10" 11 2 26 18 At3g44870 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 11 2 26 19 At3g44930 "cation/hydrogen exchanger, putative (CHX10) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 2 26 20 At3g45090 2-phosphoglycerate kinase-related contains weak similarity to 2-phosphoglycerate kinase (GI:467751) [Methanothermus fervidus] 11 2 26 21 At3g45130 "cycloartenol synthase, putative / 2,3-epoxysqualene--cycloartenol cyclase, putative / (S)-2,3-epoxysqualene mutase, putative 77% similar to cycloartenol synthase [SP|P38605|gi:452446] [PMID: 7505443]; oxidosqualene cyclase LcOSC2 - Luffa cylindrica, EMBL:AB033335" 11 2 26 22 At3g45330 "lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, Prosite:PS00108; contains Pfam profiles PF00069: Protein kinase domain, PF00139: Legume lectins beta domain, PF00138: Legume lectins alpha domain" 11 2 26 23 At3g45400 exostosin family protein contains Pfam profile: PF03016 Exostosin family 11 2 26 24 Blank Blank 11 2 26 25 Blank Blank 11 3 1 1 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 11 3 1 2 atc06 Randomly generated negative control 11 3 1 3 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 11 3 1 4 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 11 3 1 5 Alien2 Control: Stratagene Spotreport Alien Oligo 11 3 1 6 Alien8 Control: Stratagene Spotreport Alien Oligo 11 3 1 7 atc04 Randomly generated negative control 11 3 1 8 atc10 Randomly generated negative control 11 3 1 9 At1g02020 nitroreductase family protein contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide 11 3 1 10 At1g02060 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 3 1 11 At1g02160 expressed protein 11 3 1 12 At1g02205 CER1 protein identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from [Arabidopsis thaliana] 11 3 1 13 At1g02370 pentatricopeptide (PPR) repeat-containing protein low similarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat 11 3 1 14 At1g02420 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile: PF01535 PPR repeat 11 3 1 15 At1g02610 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 1 16 At1g02670 "DNA repair protein, putative similar to SP|P79051 DNA repair protein rhp16 (RAD16 homolog) {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 11 3 1 17 At1g05260 peroxidase 3 (PER3) (P3) / rare cold-inducible protein (RCI3A) (PRC) identical to SP|O23044 Peroxidase 3 precursor (EC 1.11.1.7) (Atperox P3) (Rare cold inducible protein) (RCI3A) (ATPRC) {Arabidopsis thalliana} 11 3 1 18 At1g05310 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 3 1 19 At1g05470 endonuclease/exonuclease/phosphatase family protein simlar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 11 3 1 20 At1g05530 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 3 1 21 At1g05680 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 3 1 22 At1g05720 selenoprotein family protein contains Prosite PS00190: Cytochrome c family heme-binding site signature; similar to 15 kDa selenoprotein (GI:12314088) {Homo sapiens} 11 3 1 23 At1g05860 expressed protein 11 3 1 24 At1g05900 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 11 3 1 25 At1g08410 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 11 3 2 1 At1g08460 histone deacetylase family protein (HDA8) identical to HDA8 [Arabidopsis thaliana] GI:21360988low similarity to SP|Q9Z2V5 Histone deacetylase 6 (HD6) (Histone deacetylase mHDA2) {Mus musculus}; contains Pfam profile PF00850: Histone deacetylase family; supporting cDNA gi|21360987|gb|AF510167.1| 11 3 2 2 At1g08640 expressed protein 11 3 2 3 At1g08680 ARF GAP-like zinc finger-containing protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like zinc finger-containing protein ZiGA4 GI:10441354 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 11 3 2 4 At1g08810 myb family transcription factor (MYB60) 11 3 2 5 At1g08860 "copine, putative Similar to BONZAI1 [Arabidopsis thaliana] GI:15487382; contains Pfam profile PF00168: C2 domain" 11 3 2 6 At1g09030 histone-like transcription factor (CBF/NF-Y) family protein contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to CAAT-box DNA binding protein subunit B (NF-YB) (GI:22380) [Zea mays] 11 3 2 7 At1g09090 respiratory burst oxidase protein B (RbohB) / NADPH oxidase identical to respiratory burst oxidase protein B from Arabidopsis thaliana [gi:3242783] 11 3 2 8 At1g11670 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family; EST gb|W43487 comes from this gene 11 3 2 9 At1g11730 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 11 3 2 10 At1g11870 "seryl-tRNA synthetase, putative / serine--tRNA ligase, putative similar to PIR|T03949 serine--tRNA ligase (EC 6.1.1.11) serS {Zea mays}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF02403: Seryl-tRNA synthetase N-terminal domain" 11 3 2 11 At1g11915 expressed protein 11 3 2 12 At1g12060 "IQ domain-containing protein / BAG domain-containing protein contains Pfam profiles PF00612: IQ calmodulin-binding motif, PF02179: BAG (Apoptosis regulator Bcl-2 protein) domain" 11 3 2 13 At1g12100 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 11 3 2 14 At1g12280 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 11 3 2 15 At1g12340 cornichon family protein contains Pfam profile: PF03311 cornichon protein 11 3 2 16 At1g15100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 2 17 At1g15140 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene 11 3 2 18 At1g15250 60S ribosomal protein L37 (RPL37A) almost identical to GB:Q43292 11 3 2 19 At1g15320 hypothetical protein 11 3 2 20 At1g15430 expressed protein 11 3 2 21 At1g15490 "hydrolase, alpha/beta fold family protein Contains PF 00561 alpha/beta hydrolase fold" 11 3 2 22 At1g15690 pyrophosphate-energized vacuolar membrane proton pump / pyrophosphate-energized inorganic pyrophosphatase (AVP-3) identical to pyrophosphate-energized vacuolar membrane proton pump (pyrophosphate-energized inorganic pyrophosphatase) SP:P31414 from [Arabidopsis thaliana] 11 3 2 23 At1g15750 WD-40 repeat family protein contains 10 WD-40 repeats (PF00400) (1 weak) 11 3 2 24 At1g18510 hypothetical protein 11 3 2 25 At1g18570 myb family transcription factor (MYB51) contains PFAM profile: PF00249 11 3 3 1 At1g18740 expressed protein 11 3 3 2 At1g18800 nucleosome assembly protein (NAP) family protein similar to SP|Q01105|SET protein (HLA-DR associated protein II) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) {Homo sapiens}; contains Pfam profile PF00956: Nucleosome assembly protein (NAP) 11 3 3 3 At1g19000 myb family transcription factor similar to MybSt1 GI:7705206 from [Solanum tuberosum] 11 3 3 4 At1g19020 expressed protein 11 3 3 5 At1g19170 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein low similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 11 3 3 6 At1g19220 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 11 3 3 7 At1g22140 expressed protein 11 3 3 8 At1g22180 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam profile: PF00650 CRAL/TRIO domain; similar to polyphosphoinositide binding protein Ssh1p (GI:|2739044) {Glycine max}; similar to Phosphatidylinositol Transfer Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae] 11 3 3 9 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 11 3 3 10 At1g22340 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase; similar to UDP-glucose glucosyltransferase GI:3928543 from [Arabidopsis thaliana] 11 3 3 11 At1g22530 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to SEC14-like protein 2 (Alpha-tocopherol associated protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos taurus}" 11 3 3 12 At1g22590 MADS-box family protein similar to putative DNA-binding protein GI:6714399 from [Arabidopsis thaliana]; MADS-box protein AGL87 11 3 3 13 At1g22750 expressed protein 11 3 3 14 At1g22800 "expressed protein similar to Biotin synthesis protein bioC. {Serratia marcescens} (SP:P36571); ESTs gb|Z34075, gb|Z34835 and gb|AA404888 come from this gene" 11 3 3 15 At1g26350 hypothetical protein 11 3 3 16 At1g26410 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 11 3 3 17 At1g26600 "CLE9, putative CLAVATA3/ESR-Related 9 (CLE9); similar to hypothetical protein GB:AAF67770 GI:7705091 from [Arabidopsis thaliana]" 11 3 3 18 At1g26660 "c-myc binding protein, putative / prefoldin, putative similar to Swiss-Prot:Q99471 prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1) [Homo sapiens]" 11 3 3 19 At1g26797 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 11 3 3 20 At1g26830 "cullin, putative similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens]; contains Pfam profile PF00888: Cullin family" 11 3 3 21 At1g27030 expressed protein 11 3 3 22 At1g27090 glycine-rich protein 11 3 3 23 At1g29950 expressed protein 11 3 3 24 At1g29990 "prefoldin, putative similar to Swiss-Prot:O15212 prefoldin subunit 6 (Protein Ke2) [Homo sapiens]" 11 3 3 25 At1g30160 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 11 3 4 1 At1g30230 elongation factor 1-beta / EF-1-beta identical to SP|P48006 Elongation factor 1-beta (EF-1-beta) {Arabidopsis thaliana} 11 3 4 2 At1g30450 "cation-chloride cotransporter, putative similar to cation-chloride co-transporter GB:AAC49874 GI:2582381 from [Nicotiana tabacum], Cation-Chloride Cotransporter (CCC) Family Member, PMID:11500563" 11 3 4 3 At1g30500 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) 11 3 4 4 At1g30640 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 11 3 4 5 At1g30700 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 11 3 4 6 At1g33720 "cytochrome P450, putative similar to SP|O64636 Cytochrome P450 76C1 (EC 1.14.-.-) {Arabidopsis thaliana}; contains Pfam profile PF00067: Cytochrome P450" 11 3 4 7 At1g33790 jacalin lectin family protein similar to myrosinase binding protein homolog GI:2997767 from [Arabidopsis thaliana]; contains contains Pfam profile PF01419 jacalin-like lectin domain 11 3 4 8 At1g33960 "avirulence-responsive protein / avirulence induced gene (AIG1) identical to AIG1 (exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas) SP:U40856 [Arabidopsis thaliana] (Plant Cell 8 (2), 241-249 (1996))" 11 3 4 9 At1g34000 light stress-responsive one-helix protein (OHP2) contains similarity to photosystem II 22 kDa protein GI:6006279 from [Arabidopsis thaliana] 11 3 4 10 At1g34180 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM-like protein GI:8809651 from (Arabidopsis thaliana) 11 3 4 11 At1g34260 phosphatidylinositol-4-phosphate 5-kinase family protein low similarity to SP|Q9Z1T6 FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase 11 3 4 12 At1g34420 "leucine-rich repeat family protein / protein kinase family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 11 3 4 13 At1g34490 "membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related contains similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 11 3 4 14 At1g44750 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 11 3 4 15 At1g44790 ChaC-like family protein contains Pfam profile: PF04752 ChaC-like protein 11 3 4 16 At1g44980 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 3 4 17 At1g45080 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 11 3 4 18 At1g45248 "hypothetical protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 11 3 4 19 At1g45474 "chlorophyll A-B binding protein, putative (LHCA5) identical to Lhca5 protein [Arabidopsis thaliana] GI:4741942; contains Pfam profile: PF00504 chlorophyll A-B binding protein; similar to light-harvesting complex protein GI:22752 from [Pinus sylvestris]" 11 3 4 20 At1g47210 "cyclin family protein similar to A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profile PF00134: Cyclin, N-terminal domain" 11 3 4 21 At1g47250 "20S proteasome alpha subunit F2 (PAF2) (PRC2B) (PRS1) identical to GB:AAC32063 from [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); identical to cDNA proteasome subunit prc2b GI:2511585" 11 3 4 22 At1g50170 expressed protein similar to Cbi protein (GI:3724039) [Bacillus megaterium]; similar to YlnE protein (GI:2462961) [Bacillus subtilis]; similar to NirR (GI:4433637) [Staphylococcus carnosus] 11 3 4 23 At1g50250 "cell division protein ftsH homolog 1, chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell division protein ftsH homolog 1, chloroplast precursor (EC 3.4.24.-) [Arabidopsis thaliana]" 11 3 4 24 At1g50440 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 4 25 At1g50500 "membrane trafficking VPS53 family protein contains Pfam domain PF04100: Vps53-like, N-terminal" 11 3 5 1 At1g50690 expressed protein ; expression supported by MPSS 11 3 5 2 At1g50750 expressed protein 11 3 5 3 At1g50960 "gibberellin 20-oxidase-related similar to gibberellin 20-oxidase from Pisum sativum [GI:1848146], Phaseolus vulgaris [GI:2262201]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 11 3 5 4 At1g51030 hypothetical protein 11 3 5 5 At1g53670 transcription factor-related similar to pilin-like transcription factor [Homo sapiens] GI:5059062; contains Pfam profile PF01641: SelR domain 11 3 5 6 At1g53720 "cyclophilin-RNA interacting protein, putative " 11 3 5 7 At1g53885 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 11 3 5 8 At1g53940 GDSL-motif lipase/hydrolase family protein similar to lipase GI:1145627 from (Arabidopsis thaliana); contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 11 3 5 9 At1g54080 "oligouridylate-binding protein, putative similar to oligouridylate binding protein GI:6996560 from [Nicotiana plumbaginifolia]" 11 3 5 10 At1g54120 expressed protein 11 3 5 11 At1g54280 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|O43520], Mus musculus [SP|P70704]; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 11 3 5 12 At1g54320 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Similar to GI:11994416; GI:4966357; GI:4835763; GI:9757735 from [Arabidopsis thaliana] 11 3 5 13 At1g57906 hypothetical protein 11 3 5 14 At1g58050 "helicase domain-containing protein contains similarity to SP|P24785 Dosage compensation regulator (Male-less protein) (No action potential protein) {Drosophila melanogaster}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 11 3 5 15 At1g58230 "WD-40 repeat family protein / beige-related contains Pfam PF00400: WD domain, G-beta repeat; similar to Lipopolysaccharide-responsive and beige-like anchor protein (CDC4-like protein) (Beige-like protein) (SP:P50851) [Homo sapiens}" 11 3 5 16 At1g58270 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 11 3 5 17 At1g58430 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 11 3 5 18 At1g58520 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 11 3 5 19 At1g59520 expressed protein (CW7) 11 3 5 20 At1g59580 "mitogen-activated protein kinase, putative / MAPK, putative (MPK2) identical to mitogen-activated protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana] SWISS-PROT:Q39022; PMID:12119167" 11 3 5 21 At1g62490 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 11 3 5 22 At1g62560 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase GB:AAA21178 GI:349534 SP|P32417 from [Oryctolagus cuniculus]; contains Pfam profile PF00743 Flavin-binding monooxygenase-like 11 3 5 23 At1g62730 expressed protein 11 3 5 24 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 11 3 5 25 At1g62920 expressed protein ; expression supported by MPSS 11 3 6 1 At1g62970 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226: DnaJ domain 11 3 6 2 At1g63120 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 11 3 6 3 At1g63170 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|Q06003 Goliath protein (G1 protein) {Drosophila melanogaster}; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 11 3 6 4 At1g65900 expressed protein 11 3 6 5 At1g65970 "peroxiredoxin type 2, putative strong similarity to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] GI:4928472; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 11 3 6 6 At1g66140 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 3 6 7 At1g66170 PHD finger family protein (MMD1) contains Pfam profile: PF00628: PHD-finger 11 3 6 8 At1g66340 "ethylene receptor 1 (ETR1) identical to GB:P49333 from [Arabidopsis thaliana] (Science 262 (5133), 539-544 (1993))" 11 3 6 9 At1g66390 "myb family transcription factor, putative / production of anthocyanin pigment 2 protein (PAP2) contains Pfam profile: PF00249 myb-like DNA-binding domain; similar to GB:AAF66727 from [Petunia x hybrida] (Plant Cell 11 (8), 1433-1444 (1999)); identical to cDNA production of anthocyanin pigment 2 protein (PAP2) GI:11935172" 11 3 6 10 At1g66560 WRKY family transcription factor 11 3 6 11 At1g66610 "seven in absentia (SINA) protein, putative similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family" 11 3 6 12 At1g69295 "beta-1,3-glucanase-related low similarity to elicitor inducible beta-1,3-glucanase NtEIG-E76 [Nicotiana tabacum] GI:11071974" 11 3 6 13 At1g69330 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 6 14 At1g69485 hypothetical protein 11 3 6 15 At1g69520 "methyltransferase-related weak similarity to SP|Q05197 Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17) {Rhodobacter sphaeroides}; contains domain similarity with PF01209: methyltransferase, UbiE/COQ5 family" 11 3 6 16 At1g69670 "cullin, putative contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens]; contains Pfam profile PF00888: Cullin family" 11 3 6 17 At1g69730 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 11 3 6 18 At1g69910 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 3 6 19 At1g69970 "CLE26, putative CLAVATA3/ESR-Related 26 (CLE26);" 11 3 6 20 At1g72770 "protein phosphatase 2C P2C-HA / PP2C P2C-HA (P2C-HA) identical to protein phosphatase 2C (AtP2C-HA) GB:AJ003119 [Arabidopsis thaliana] (Plant Mol. Biol. 38 (5), 879-883 (1998))" 11 3 6 21 At1g72830 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 11 3 6 22 At1g73000 hypothetical protein 11 3 6 23 At1g73060 expressed protein 11 3 6 24 At1g73210 expressed protein 11 3 6 25 At1g73270 "serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare], glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase;" 11 3 7 1 At1g73440 "calmodulin-related low similarity to calmodulin 8 [Arabidopsis thaliana] GI:5825600; contains Pfam profiles PF02809: Ubiquitin interaction motif, PF00036: EF hand" 11 3 7 2 At1g73490 RNA recognition motif (RRM)-containing protein contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 11 3 7 3 AT5G57480 PC-1 C02 11 3 7 4 3XSSC PC-1 C14 11 3 7 5 AT1G29930 PC-1 G02 11 3 7 6 3XSSC PC-1 G14 11 3 7 7 AT3G44150 PC-1 K02 11 3 7 8 3XSSC PC-1 K14 11 3 7 9 AT4G00810 PC-1 O02 11 3 7 10 3XSSC PC-1 O14 11 3 7 11 At1g76340 integral membrane family protein contains Pfam profile PF00892: Integral membrane protein; similar to GDP-mannose transporter (SP:Q941R4) [Arabidopsis thaliana] and to LPG2 protein (GI:9998817) [Leishmania mexicana] 11 3 7 12 At1g76390 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 11 3 7 13 At1g76520 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 11 3 7 14 At1g76560 CP12 domain-containing protein contains Pfam domain PF02672: CP12 domain 11 3 7 15 At1g76730 5-formyltetrahydrofolate cyclo-ligase family protein contains Pfam profile PF01812 5-formyltetrahydrofolate cyclo-ligase 11 3 7 16 At1g76790 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase [Catharanthus roseus][GI:18025321], catechol O-methyltransferase GB:CAA55358 [Vanilla planifolia]" 11 3 7 17 At1g76930 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 11 3 7 18 At1g76965 glycine-rich protein 11 3 7 19 At1g79620 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor protein kinase GI:1389566 from [Arabidopsis thaliana]" 11 3 7 20 At1g79660 expressed protein 11 3 7 21 At1g79800 plastocyanin-like domain-containing protein 11 3 7 22 At1g79840 homeobox-leucine zipper protein 10 (HB-10) / HD-ZIP transcription factor 10 / homeobox protein (GLABRA2) identical to homeobox protein (GLABRA2) (homeobox-leucine zipper protein ATHB-10) (HD-ZIP protein ATHB-10) GB:P46607 [Arabidopsis thaliana] 11 3 7 23 At1g79970 expressed protein 11 3 7 24 At1g80010 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282" 11 3 7 25 At1g80180 expressed protein 11 3 8 1 At1g80240 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 11 3 8 2 At2g03070 expressed protein 11 3 8 3 At2g03150 "ATP/GTP-binding protein family contains ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017" 11 3 8 4 At2g03330 expressed protein 11 3 8 5 At2g03390 uvrB/uvrC motif-containing protein contains Pfam profile PF02151: UvrB/uvrC motif 11 3 8 6 At2g03570 hypothetical protein 11 3 8 7 At2g03630 hypothetical protein 11 3 8 8 At2g03820 nonsense-mediated mRNA decay NMD3 family protein contains Pfam profile: PF04981 NMD3 family 11 3 8 9 At2g03870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] SWISS-PROT:Q9UK45" 11 3 8 10 At2g07719 expressed protein 11 3 8 11 At2g07728 expressed protein ; expression supported by MPSS 11 3 8 12 At2g09840 hypothetical protein 11 3 8 13 At2g10020 hypothetical protein and genefinder 11 3 8 14 At2g10460 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 11 3 8 15 At2g10560 hypothetical protein 11 3 8 16 At2g11015 hypothetical protein 11 3 8 17 At2g11360 hypothetical protein 11 3 8 18 At2g16300 F-box family protein contains Pfam:PF00646 F-box domain 11 3 8 19 At2g16385 expressed protein Requires functional assignment. 11 3 8 20 At2g16530 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to Arabidopsis thaliana DET2 [gi:1280611]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544 11 3 8 21 At2g16595 "translocon-associated protein (TRAP), putative similar to Swiss-Prot:P45434 translocon-associated protein, alpha subunit precursor (TRAP-alpha, Signal sequence receptor alpha subunit, SSR-alpha) [Arabidopsis thaliana]" 11 3 8 22 At2g16800 "high-affinity nickel-transport family protein contains Pfam domain, PF03824: High-affinity nickel-transport protein" 11 3 8 23 At2g16870 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 3 8 24 At2g17010 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 11 3 8 25 At2g17040 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to petunia NAM (X92205) and A. thaliana sequences ATAF1 (X74755) and ATAF2 (X74756); probable DNA-binding protein 11 3 9 1 At2g19880 "ceramide glucosyltransferase, putative similar to ceramide glucosyltransferase (GI:14718995) [Gossypium arboreum]; weak similarity to Ceramide glucosyltransferase (Glucosylceramide synthase) (GCS) (UDP-glucose:N-acylsphingosine D-glucosyltransferase) (GLCT-1) (Swiss-Prot:Q16739) [Homo sapiens]" 11 3 9 2 At2g19940 "semialdehyde dehydrogenase family protein similar to N-acetyl-glutamyl-phosphate reductase [Campylobacter jejuni] GI:6650362; contains Pfam profiles PF02774: Semialdehyde dehydrogenase dimerisation domain, PF01118: Semialdehyde dehydrogenase NAD binding domain" 11 3 9 3 At2g20080 expressed protein 11 3 9 4 At2g20145 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 11 3 9 5 At2g20330 transducin family protein / WD-40 repeat family protein similar to Transcriptional repressor rco-1 (SP:P78706) [Neurospora crassa]; similar to TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400) 11 3 9 6 At2g20390 expressed protein 11 3 9 7 At2g20550 DNAJ chaperone C-terminal domain-containing protein contains Pfam profile PF01556: DnaJ C terminal region; similar to DnaJ-like proteins (GI:6179940) [Nicotiana tabacum] and(GI:11863723) [Lycopersicon esculentum]; similar to DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) (Heat shock protein 40) (HSP40) (DnaJ protein homolog 1) (HDJ-1) (Swiss-Prot:P25685) [Homo sapiens] and (Swiss-Prot:Q9QYJ3) [Mus musculus] 11 3 9 8 At2g20585 expressed protein 11 3 9 9 At2g23230 terpene synthase/cyclase family protein 11 3 9 10 At2g23270 expressed protein ; similar to GP|2464853|gnl|PID|e353149|Z99707 11 3 9 11 At2g23460 extra-large guanine nucleotide binding protein / G-protein (XLG) identical to extra-large G-protein (XLG) [Arabidopsis thaliana] GI:3201680 11 3 9 12 At2g23530 expressed protein ; expression supported by MPSS 11 3 9 13 At2g23700 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 11 3 9 14 At2g23760 BEL1-like homeobox 4 protein (BLH4) 11 3 9 15 At2g23950 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 11 3 9 16 At2g23990 plastocyanin-like domain-containing protein 11 3 9 17 At2g26840 expressed protein 11 3 9 18 At2g26880 MADS-box family protein 11 3 9 19 At2g27030 "calmodulin-2/3/5 (CAM5) (TCH1) identical to calmodulin GI:474183 from [Arabidopsis thaliana], SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}" 11 3 9 20 At2g27070 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 11 3 9 21 At2g27230 transcription factor-related contains weak similarity to anthocyanin 1 (GI:10998404) [Petunia x hybrida]; identical to cDNA bHLH transcription factor (bHLH delta gene) gi:32563001 11 3 9 22 At2g27270 expressed protein 11 3 9 23 At2g27402 expressed protein 11 3 9 24 At2g27450 "carbon-nitrogen hydrolase family protein low similarity to beta-alanine synthase [Drosophila melanogaster] GI:14334063; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 11 3 9 25 At2g30200 expressed protein 11 3 10 1 At2g30260 "small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative similar to spliceosomal protein [Solanum tuberosum] GI:169589" 11 3 10 2 At2g30410 "tubulin folding cofactor A (KIESEL) identical to cDNA tubulin folding cofactor A, GI:20514256, SP|O04350 Tubulin-specific chaperone A (Tubulin-folding cofactor A) (CFA) (TCP1-chaperonin cofactor A homolog) {Arabidopsis thaliana}" 11 3 10 3 At2g30480 expressed protein 11 3 10 4 At2g30615 expressed protein 11 3 10 5 At2g30660 "3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein" 11 3 10 6 At2g30810 gibberellin-regulated family protein similar to GASA5 [Arabidopsis thaliana] GI:1289320; contains Pfam profile PF02704: Gibberellin regulated protein 11 3 10 7 At2g30880 pleckstrin homology (PH) domain-containing protein contains Pfam profile PF00169: PH domain 11 3 10 8 At2g33470 glycolipid transfer protein-related similar to phosphoinositol 4-phosphate adaptor protein-2 (GI:14165198) [Homo sapiens]; similar to Glycolipid transfer protein (GLTP) (Swiss-Prot:Q9JL62) [Mus musculus]; similar to Glycolipid transfer protein (GLTP) (Swiss-Prot:Q9NZD2) [Homo sapiens] 11 3 10 9 At2g33500 zinc finger (B-box type) family protein 11 3 10 10 At2g33680 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 11 3 10 11 At2g33730 "DEAD box RNA helicase, putative similar to SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28 {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 11 3 10 12 At2g33830 dormancy/auxin associated family protein contains Pfam profile: PF05564 dormancy/auxin associated protein 11 3 10 13 At2g33850 expressed protein contains 1 transmembrane domain; similar to Protein E6 (Swiss-Prot:Q01197) [Gossypium hirsutum] 11 3 10 14 At2g34090 expressed protein similar to GP|1301832|gnl|PID|e239862|Z71287 11 3 10 15 At2g34140 Dof-type zinc finger domain-containing protein 11 3 10 16 At2g36730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 3 10 17 At2g36790 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 3 10 18 At2g36930 "zinc finger (C2H2 type) family protein contains Prosite PS00028: Zinc finger, C2H2 type, domain; weak similarity to Zinc finger protein T86 (Swiss-Prot:O00488) [Homo sapiens]" 11 3 10 19 At2g36985 expressed protein 11 3 10 20 At2g37120 DNA-binding S1FA family protein contains Pfam profile: PF04689 DNA binding protein S1FA 11 3 10 21 At2g37160 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to Dystrophia myotonica-containing WD repeat motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274) [Mus musculus]; simlar to DMR protein GI:18028289 [Homo sapiens]; 11 3 10 22 At2g37330 expressed protein and genefinder 11 3 10 23 At2g37380 expressed protein 11 3 10 24 At2g39980 transferase family protein contains Pfam profile PF02458 transferase family 11 3 10 25 At2g40020 expressed protein 11 3 11 1 At2g40130 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 11 3 11 2 At2g40180 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; identical to protein phosphatase 2C (GI:4587992) [Arabidopsis thaliana]" 11 3 11 3 At2g40340 "AP2 domain-containing transcription factor, putative (DRE2B) Similar to DRE2B (GP:3738232) [Arabidopsis thaliana]" 11 3 11 4 At2g40400 expressed protein similar to GI:7572912 (At3g56140)[Arabidopsis thaliana] 11 3 11 5 At2g40530 expressed protein 11 3 11 6 At2g40590 40S ribosomal protein S26 (RPS26B) 11 3 11 7 At2g43150 "proline-rich extensin-like family protein similar to CRANTZ hydroxyproline-rich glycoprotein [Manihot esculenta] gi|7211797|gb|AAF40442; similar to extensin gi|1165322|gb|AAB53156; contains proline-rich extensin domains, INTERPRO:IPR002965" 11 3 11 8 At2g43190 ribonuclease P family protein similar to Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4) (Swiss-Prot:O95707) [Homo sapiens] 11 3 11 9 At2g43350 "glutathione peroxidase, putative " 11 3 11 10 At2g43420 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 11 3 11 11 At2g43580 "chitinase, putative similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus]" 11 3 11 12 At2g43640 signal recognition particle 14 kDa family protein / SRP14 family protein similar to SP|P16254 Signal recognition particle 14 kDa protein (SRP14) {Mus musculus}; contains Pfam profile: PF02290 signal recognition particle 14kD protein 11 3 11 13 At2g43790 "mitogen-activated protein kinase, putative / MAPK, putative (MPK6) identical to mitogen-activated protein kinase homolog 6 (AtMPK6)[Arabidopsis thaliana] SWISS-PROT:Q39026; PMID:12119167" 11 3 11 14 At2g43850 "ankyrin protein kinase, putative (APK1) similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674;contains Pfam profile PF00069: Protein kinase domain; contains Pfam profile PF00023: Ankyrin repeat" 11 3 11 15 At2g46480 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8; 11 3 11 16 At2g46520 "cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative similar to cellular apoptosis susceptibility protein [Homo sapiens] GI:3598795, SP|Q9ERK4 Importin-alpha re-exporter (Chromosome segregation 1-like protein) (Cellular apoptosis susceptibility protein) {Mus musculus}; contains Pfam profiles PF03810: Importin-beta N-terminal domain, PF03378: CAS/CSE protein C-terminus" 11 3 11 17 At2g46680 homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 identical to homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (SP:P46897) [Arabidopsis thaliana]; 11 3 11 18 At2g46740 "FAD-binding domain-containing protein strong similarity to At1g32300, At5g56490, At2g46750, At2g46760; contains PF01565: FAD binding domain" 11 3 11 19 At2g46880 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 11 3 11 20 At2g46920 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 11 3 11 21 At2g47070 squamosa promoter-binding protein-like 1 (SPL1) identical to squamosa promoter binding protein-like 1 [Arabidopsis thaliana] GI:5931655; contains Pfam profile PF03110: SBP domain 11 3 11 22 At2g47140 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 11 3 11 23 At3g02460 "plant adhesion molecule, putative strong similarity to plant adhesion molecule 1 [Arabidopsis thaliana] GI:3511223; contains Pfam profile PF00566: TBC domain" 11 3 11 24 At3g02510 regulator of chromosome condensation (RCC1) family protein similar to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 11 3 11 25 At3g02640 expressed protein 11 3 12 1 At3g02700 "NC domain-containing protein contains Pfam domain, PF04970: NC domain" 11 3 12 2 At3g02870 "inositol-1(or 4)-monophosphatase, putative / inositol monophosphatase, putative / IMPase, putative similar to SP|P54928 Inositol-1(or 4)-monophosphatase 3 (EC 3.1.3.25) (IMPase 3) (IMP 3) (Inositol monophosphatase 3) {Lycopersicon esculentum}; contains Pfam profile PF00459: Inositol monophosphatase family" 11 3 12 3 At3g02910 expressed protein contains Pfam domain PF03674: Uncharacterised protein family (UPF0131) 11 3 12 4 At3g03090 sugar transporter family protein similar to xylose permease [Bacillus megaterium] GI:1924928; contains Pfam profile PF00083: major facilitator superfamily protein 11 3 12 5 At3g03150 expressed protein 11 3 12 6 At3g05710 "syntaxin, putative similar to syntaxin of plants 42 [Arabidopsis thaliana] GI:5059352" 11 3 12 7 At3g05760 expressed protein 11 3 12 8 At3g05935 expressed protein 11 3 12 9 At3g05975 hypothetical protein 11 3 12 10 At3g06100 major intrinsic family protein / MIP family protein contains Pfam profile: PF00230 major intrinsic protein; contains non-consensus TT acceptor splice site at exon 4 11 3 12 11 At3g06145 expressed protein 11 3 12 12 At3g06310 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein contains Pfam profile PF05850: NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8); similar to NADH-ubiquinone oxidoreductase 19 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-19KD) (CI-19KD) (Complex I-PGIV) (CI-PGIV) (Swiss-Prot:P51970) [Homo sapiens] 11 3 12 13 At3g06370 "sodium proton exchanger, putative (NHX3) similar to sodium proton exchanger (Nhx1) GB:AAD16946 [Arabidopsis thaliana]; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 11 3 12 14 At3g09300 oxysterol-binding family protein similar to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens}; contains Pfam profile PF01237: Oxysterol-binding protein 11 3 12 15 At3g09360 "transcription factor IIB (TFIIB) family protein contains Pfam domain, PF00382: Transcription factor TFIIB repeat" 11 3 12 16 At3g09530 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 11 3 12 17 At3g09590 "pathogenesis-related protein, putative similar to SP|Q05968 Pathogenesis-related protein 1 precursor {Hordeum vulgare}; contains Pfam profile PF00188: SCP-like extracellular protein" 11 3 12 18 At3g09770 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 3 12 19 At3g09800 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 11 3 12 20 At3g09950 hypothetical protein ; expression supported by MPSS 11 3 12 21 At3g10010 HhH-GPD base excision DNA repair family protein similar to DEMETER protein [Arabidopsis thaliana] GI:21743571; contains Pfam profile PF00730: HhH-GPD superfamily base excision DNA repair protein 11 3 12 22 At3g12390 "nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative similar to alpha-NAC, non-muscle form [Mus musculus] GI:1666690; contains Pfam profiles PF01849: NAC domain, PF00627: UBA/TS-N domain" 11 3 12 23 At3g12450 hypothetical protein 11 3 12 24 At3g12620 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 11 3 12 25 At3g12680 floral homeotic protein (HUA1) identical to floral homeotic protein HUA1 [Arabidopsis thaliana] gi|16797661|gb|AAK01470 11 3 13 1 At3g12840 hypothetical protein 11 3 13 2 At3g12900 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to SP|P10967 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein E8) {Lycopersicon esculentum}, desacetoxyvindoline-4-hydroxylase [Catharanthus roseus] GI:2352812; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 11 3 13 3 At3g13060 expressed protein contains Pfam profile PF04146: YT521-B-like family 11 3 13 4 At3g13070 "CBS domain-containing protein / transporter associated domain-containing protein similar to SP|Q54318 Hemolysin C [Serpulina hyodysenteriae] {Treponema hyodysenteriae}; contains Pfam profiles PF00571: CBS domain, PF03471: Transporter associated domain, PF01595: Domain of unknown function" 11 3 13 5 At3g15395 expressed protein 11 3 13 6 At3g15450 "expressed protein similar to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 11 3 13 7 At3g15610 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to serine/threonine kinase receptor associated protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus]; UNR-interacting protein GB:NP_009109 [Homo sapiens] 11 3 13 8 At3g15670 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P13934 Late embryogenesis abundant protein 76 (LEA 76) {Brassica napus}; contains Pfam profile PF02987: Late embryogenesis abundant protein" 11 3 13 9 At3g15830 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 11 3 13 10 At3g15880 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies)" 11 3 13 11 At3g16030 lectin protein kinase family protein contains Pfam domains PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding) 11 3 13 12 At3g16090 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 13 13 At3g18750 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 3 13 14 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 11 3 13 15 At3g18930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 11 3 13 16 At3g18990 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 11 3 13 17 At3g19150 kip-related protein 6 (KRP6) / cyclin-dependent kinase inhibitor 6 (ICK6) identical to cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis thaliana] GI:14422295 11 3 13 18 At3g19200 hypothetical protein 11 3 13 19 At3g19370 expressed protein 11 3 13 20 At3g19420 expressed protein 11 3 13 21 At3g22120 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family" 11 3 13 22 At3g22200 "4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase identical to gamma-aminobutyrate transaminase subunit precursor [Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434" 11 3 13 23 At3g22360 "alternative oxidase 1b, mitochondrial (AOX1B) identical to GB:O23913 [SP|O23913] from [Arabidopsis thaliana]" 11 3 13 24 At3g22420 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 3 13 25 At3g22510 expressed protein 11 3 14 1 At3g22570 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 11 3 14 2 At3g22760 CXC domain containing TSO1-like protein 1 (SOL1) identical to CXC domain containing TSO1-like protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain; supporting cDNA gi|7767426|gb|AF205142.1|AF205142 11 3 14 3 At3g22820 allergen-related weak similarity to pollen major allergen 2 protein [Juniperus ashei] gi|9955725|emb|CAC05582 11 3 14 4 At3g25720 hypothetical protein 11 3 14 5 At3g25770 "allene oxide cyclase, putative / early-responsive to dehydration protein, putative / ERD protein, putative strong similarity to early-responsive to dehydration (ERD12) protein [GI:15320414]; similar to allene oxide cyclase GI:8977961 from [Lycopersicon esculentum]; contains Pfam profile PF06351: Allene oxide cyclase" 11 3 14 6 At3g25900 homocysteine S-methyltransferase 1 (HMT-1) identical to GB:AAF23821 from [Arabidopsis thaliana] 11 3 14 7 At3g25950 hypothetical protein 11 3 14 8 At3g26115 expressed protein 11 3 14 9 At3g26140 glycosyl hydrolase family 5 protein / cellulase family protein contains Pfam profile: PF00150 cellulase (glycosyl hydrolase family 5) 11 3 14 10 At3g26300 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 11 3 14 11 At3g26360 ribosomal protein-related similar to SP|Q9Z3S4 30S ribosomal protein S21 {Rhizobium meliloti} 11 3 14 12 At3g29060 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 11 3 14 13 At3g29110 "terpene synthase/cyclase family protein contains Pfam profile: PF01397 terpene synthase family; similar to epidermal germacrene C synthase GB:AAC39431 [Lycopersicon esculentum], (+)-delta-cadinene synthase GB:P93665 [Gossypium hirsutum]" 11 3 14 14 At3g29240 "expressed protein similar to At1g33780 [Arabidopsis thaliana]; contains Pfam profile PF02622: Uncharacterized ACR, COG1678" 11 3 14 15 At3g29280 expressed protein ; expression supported by MPSS 11 3 14 16 At3g29410 "terpene synthase/cyclase family protein similar to terpene synthase GB:CAA72074 from [Arabidopsis thaliana], contains Pfam profile: PF01397 terpene synthase family" 11 3 14 17 At3g29570 hypothetical protein 11 3 14 18 At3g29740 hypothetical protein 11 3 14 19 At3g29770 "hydrolase, alpha/beta fold family protein similar to SP|Q40708 PIR7A protein {Oryza sativa}, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile: PF00561 alpha/beta hydrolase fold" 11 3 14 20 At3g43850 hypothetical protein similar to MTD1 [Medicago truncatula] GI:9294810 11 3 14 21 At3g43910 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 3 14 22 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 11 3 14 23 At3g44140 hypothetical protein 11 3 14 24 At3g44320 nitrilase 3 (NIT3) identical to SP|P46010 Nitrilase 3 (EC 3.5.5.1) {Arabidopsis thaliana} 11 3 14 25 At3g44380 "expressed protein predicted proteins, Arabidopsis thaliana" 11 3 15 1 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 11 3 15 2 At3g44630 "disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein., closest Col-0 homolog to RPP1-WsB" 11 3 15 3 At3g47490 HNH endonuclease domain-containing protein contains Pfam domain PF01844: HNH endonuclease 11 3 15 4 At3g47540 "chitinase, putative similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus]" 11 3 15 5 At3g47690 microtubule-associated EB1 family protein similar to SP|Q9UPY8 Microtubule-associated protein RP/EB family member 3 (Protein EB3) {Homo sapiens}; contains Pfam profile PF03271: EB1 protein 11 3 15 6 At3g47750 "ABC transporter family protein probable transport protein ABC-C, Homo sapiens, PIR2:S71363" 11 3 15 7 At3g47910 "expressed protein low similarity to nonmuscle myosin heavy chain (NMHC) [Homo sapiens] GI:189036; contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 11 3 15 8 At3g47965 expressed protein 11 3 15 9 At3g48140 "senescence-associated protein, putative similar to B12D protein [Ipomoea batatas] GB:AAD22104" 11 3 15 10 At3g48180 expressed protein 11 3 15 11 At3g51070 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 11 3 15 12 At3g51110 "crooked neck protein, putative / cell cycle protein, putative similar to Swiss-Prot:P17886 crooked neck protein [Drosophila melanogaster]" 11 3 15 13 At3g51300 "Rac-like GTP-binding protein (ARAC11) / Rho-like GTP-binding protein (ROP1) identical to GTP binding protein Rop1At [Arabidopsis thaliana] GI:2558666, rac-like GTP binding protein Arac11 [Arabidopsis thaliana] GI:3603426" 11 3 15 14 At3g51350 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 11 3 15 15 At3g51520 diacylglycerol acyltransferase family contains Pfam PF03982: Diacylglycerol acyltransferase 11 3 15 16 At3g51580 expressed protein 11 3 15 17 At3g51740 "leucine-rich repeat transmembrane protein kinase, putative brassinosteroid-insensitive protein BRI1 - Arabidopsis thaliana, PIR:T09356" 11 3 15 18 At3g51780 BAG domain-containing protein low similarity to SP|Q99933 BAG-family molecular chaperone regulator-1 {Homo sapiens}; contains Pfam profile PF02179: BAG (Apoptosis regulator Bcl-2 protein) domain 11 3 15 19 At3g54270 sucrose-phosphatase 3 (SPP3) nearly identical to sucrose-phosphatase (SPP3) [Arabidopsis thaliana] GI:16904077 11 3 15 20 At3g54320 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 11 3 15 21 At3g54480 SKP1 interacting partner 5 (SKIP5) identical to GP:14348816 SKP1-interacting partner 5 {Arabidopsis thaliana} 11 3 15 22 At3g54530 hypothetical protein 11 3 15 23 At3g54710 expressed protein 11 3 15 24 At3g54770 RNA recognition motif (RRM)-containing protein low similarity to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 11 3 15 25 At3g54910 "expressed protein various pedicted proteins, Arabidopsis thaliana" 11 3 16 1 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 11 3 16 2 At3g57770 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 11 3 16 3 At3g57800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supported by full-length cDNA gi:20127059 11 3 16 4 At3g57980 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 11 3 16 5 At3g58040 seven in absentia (SINA) family protein similar to siah-1A protein [Mus musculus] GI:297035; contains Pfam profile PF03145: Seven in absentia protein family 11 3 16 6 At3g58230 hypothetical protein 11 3 16 7 At3g58290 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 11 3 16 8 At3g58450 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 11 3 16 9 At3g58510 "DEAD box RNA helicase, putative (RH11) similar to RNA helicase DBY protein [Mus musculus] GI:3790186, SP|O00571 DEAD-box protein 3 (Helicase-like protein 2) {Homo sapiens}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain; identical to cDNA DEAD box RNA helicase, RH11 GI:3775998" 11 3 16 10 At3g61240 "DEAD/DEAH box helicase, putative (RH12) identical to cDNA DEAD box RNA helicase, RH12 GI:3776000" 11 3 16 11 At3g61290 hypothetical protein 11 3 16 12 At3g61450 syntaxin 73 (SYP73) identical to syntaxin 73 (AtSYP73) (Swiss-Prot:Q94KK5) [Arabidopsis thaliana] 11 3 16 13 At3g61510 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthases from Citrus sinensis [GI:6434142], Cucumis melo [GI:695402], Cucumis sativus [GI:3641645]" 11 3 16 14 At3g61670 expressed protein weak similarity to extra-large G-protein [Arabidopsis thaliana] GI:3201682 11 3 16 15 At3g61710 autophagy protein Apg6 family contains weak similarity to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam profile PF04111: Autophagy protein Apg6 11 3 16 16 At3g61870 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803), PIR:S75899" 11 3 16 17 At3g61920 "expressed protein hypothetical protein F1N19.27 - Arabidopsis thaliana, EMBL:AC009519" 11 3 16 18 At4g00870 basic helix-loop-helix (bHLH) family protein similar to the myc family of helix-loop-helix transcription factors; contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain; PMID: 12679534 11 3 16 19 At4g00910 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 11 3 16 20 At4g01060 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 11 3 16 21 At4g01110 hypothetical protein 11 3 16 22 At4g01260 "hypothetical protein low similarity to storekeeper protein [Solanum tuberosum] GI:14268476; contains Pfam profile PF04504: Protein of unknown function, DUF573" 11 3 16 23 At4g01320 "CAAX protease, putative (STE24) contains Pfam domain, PF01435: Peptidase family M48" 11 3 16 24 At4g01470 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 11 3 16 25 At4g01530 hypothetical protein 11 3 17 1 At4g04370 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 11 3 17 2 At4g04402 "two-component phosphorelay mediator, putative similar to ATHP1 [Arabidopsis thaliana] GI:4156241, ATHP2 [Arabidopsis thaliana] GI:4156243" 11 3 17 3 At4g04620 "autophagy 8b (APG8b) identical to autophagy 8b [Arabidopsis thaliana] GI:19912153; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 11 3 17 4 At4g04680 hypothetical protein 11 3 17 5 At4g04840 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062; contains Pfam profile PF01641: SelR domain 11 3 17 6 At4g04890 homeobox-leucine zipper protein protodermal factor 2 (PDF2) identical to GP|14276060| protodermal factor2 (GI:14276060) 11 3 17 7 At4g05020 "NADH dehydrogenase-related similar to alternative NADH-dehydrogenase [Yarrowia lipolytica] GI:3718005, 64 kDa mitochondrial NADH dehydrogenase [Neurospora crassa] GI:4753821; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 11 3 17 8 At4g05080 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 11 3 17 9 At4g09790 F-box family protein hypothetical protein -Arabidopsis thaliana;PID:g2245079; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 11 3 17 10 At4g09850 expressed protein ; expression supported by MPSS 11 3 17 11 At4g09990 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 11 3 17 12 At4g10050 "hydrolase, alpha/beta fold family protein similar to protein phosphatase methylesterase-1 [Homo sapiens] GI:5533003; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 11 3 17 13 At4g10190 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 11 3 17 14 At4g10250 22.0 kDa ER small heat shock protein (HSP22.0-ER) identical to endomembrane-localized small heat shock protein GI:511795 from [Arabidopsis thaliana] 11 3 17 15 At4g10420 hypothetical protein 11 3 17 16 At4g10470 expressed protein 11 3 17 17 At4g13263 hypothetical protein 11 3 17 18 At4g13310 "cytochrome P450 71A20, putative (CYP71A20) Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis thaliana]; similar to cytochrome P450 71A4, Solanum melongena, PIR2:S36805" 11 3 17 19 At4g13450 universal stress protein (USP) family protein 11 3 17 20 At4g13510 "ammonium transporter 1, member 1 (AMT1.1) identical to SP|P54144 High affinity ammonium transporter (AtAMT1;1) {Arabidopsis thaliana}" 11 3 17 21 At4g13660 "pinoresinol-lariciresinol reductase, putative similar to pinoresinol-lariciresinol reductase TH1 [Tsuga heterophylla][GI:7578915]; contains isoflavone reductase domain PF02716" 11 3 17 22 At4g13720 "inosine triphosphate pyrophosphatase, putative / HAM1 family protein contains Pfam profile PF01725: Ham1 family; similar to inosine triphosphate pyrophosphatase (GI:13398328) [Homo sapiens]" 11 3 17 23 At4g13850 glycine-rich RNA-binding protein (GRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabidopsis thaliana] GI:2826811 11 3 17 24 At4g13880 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 11 3 17 25 At4g16250 phytochrome D (PHYD) nearly identical to SP|P42497 Phytochrome D {Arabidopsis thaliana} 11 3 18 1 At4g16295 self-incompatibility protein-related similar to self-incompatibility [Papaver nudicaule] GI:3097262 11 3 18 2 At4g16450 expressed protein 11 3 18 3 At4g16510 YbaK/prolyl-tRNA synthetase-related contains weak hit to Pfam profile PF04073: YbaK/prolyl-tRNA synthetases associated domain 11 3 18 4 At4g16640 "matrix metalloproteinase, putative metalloproteinase [Arabidopsis thaliana] GI:3128477; contains InterPro accession IPR001818: Matrixin" 11 3 18 5 At4g16695 expressed protein 11 3 18 6 At4g16790 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 3 18 7 At4g16840 expressed protein 11 3 18 8 At4g19400 expressed protein 11 3 18 9 At4g19460 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 11 3 18 10 At4g19620 hypothetical protein 11 3 18 11 At4g19670 "zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam domain PF01485: IBR domain" 11 3 18 12 At4g19840 lectin-related similar to PP2 lectin polypeptide [Cucurbita maxima] GI:410437 11 3 18 13 At4g19880 "glutathione S-transferase-related contains weak hit to Pfam profile PF00043: Glutathione S-transferase, C-terminal domain" 11 3 18 14 At4g20030 RNA recognition motif (RRM)-containing protein low similarity to heterogeneous nuclear ribonucleoprotein G [Mus musculus] GI:5579009; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 11 3 18 15 At4g20090 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 3 18 16 At4g22890 expressed protein 11 3 18 17 At4g22930 "dihydroorotase, mitochondrial / DHOase (PYR4) identical to SP|O04904 Dihydroorotase, mitochondrial precursor (EC 3.5.2.3) (DHOase) {Arabidopsis thaliana}" 11 3 18 18 At4g23110 hypothetical protein 11 3 18 19 At4g23160 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 11 3 18 20 At4g23310 "receptor-like protein kinase, putative similar to receptor-like protein kinase 4 (gi:13506745), 5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis thaliana; contains Pfam protein kinase domain PF00069" 11 3 18 21 At4g23360 "expressed protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function; expression supported by MPSS" 11 3 18 22 At4g23510 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 11 3 18 23 At4g23560 glycosyl hydrolase family 9 protein similar to cellulase GI:1039431 from [Phaseolus vulgaris] 11 3 18 24 At4g26130 expressed protein 11 3 18 25 At4g26180 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 11 3 19 1 At4g26340 F-box family protein contains F-box domain Pfam:PF00646 11 3 19 2 At4g26390 "pyruvate kinase, putative identical to probable pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) [Arabidopsis thaliana] SWISS-PROT:O65595" 11 3 19 3 At4g26530 "fructose-bisphosphate aldolase, putative strong similarity to SP|P22197 Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis thaliana}" 11 3 19 4 At4g26570 calcineurin B-like protein 3 (CBL3) identical to calcineurin B-like protein 3 (GI:22136404) [Arabidopsis thaliana] 11 3 19 5 At4g26710 ATP synthase subunit H family protein contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) [Homo sapiens] 11 3 19 6 At4g26770 "phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative similar to CDP-diacylglycerol synthetase GI:2182104 from [Solanum tuberosum]" 11 3 19 7 At4g29360 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 11 3 19 8 At4g29410 "60S ribosomal protein L28 (RPL28C) unknown protein chromosome II BAC F6F22 - Arabidopsis thaliana,PID:g3687251" 11 3 19 9 At4g29590 expressed protein 11 3 19 10 At4g29650 "cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase identical to cytidine deaminase homolog DesH [Arabidopsis thaliana] GI:4836450, cytidine deaminase 4 (CDA4) [Arabidopsis thaliana] GI:3818579; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 11 3 19 11 At4g29790 expressed protein 11 3 19 12 At4g29840 "threonine synthase, chloroplast identical to SP|Q9S7B5 Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}" 11 3 19 13 At4g30000 "dihydropterin pyrophosphokinase, putative / dihydropteroate synthase, putative / DHPS, putative similar to dihydropterin pyrophosphokinase /dihydropteroate synthase [Pisum sativum] gi|1934972|emb|CAA69903" 11 3 19 14 At4g30060 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 11 3 19 15 At4g32560 paramyosin-related contains weak similarity to Paramyosin (Swiss-Prot:P10567) [Caenorhabditis elegans] 11 3 19 16 At4g32590 ferredoxin-related contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domain 11 3 19 17 At4g32770 "tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) identical to SP|Q94FY7 Tocopherol cyclase, chloroplast precursor (Vitamin E deficient 1) (Sucrose export defective 1) {Arabidopsis thaliana}" 11 3 19 18 At4g32820 expressed protein ; expression supported by MPSS 11 3 19 19 At4g32930 "expressed protein predicted protein, Caenorhabditis elegans, gb:Z70780" 11 3 19 20 At4g32990 "transducin family protein / WD-40 repeat family protein HIRA protein, Drosophila melanogaster, PID:e1250847" 11 3 19 21 At4g33140 expressed protein 11 3 19 22 At4g33210 F-box family protein (FBL15) contains similarity to F-box protein FBL2 GI:6063090 from [Homo sapiens] 11 3 19 23 AT5G57480 PC-1 C02 11 3 19 24 3XSSC PC-1 C14 11 3 19 25 AT1G29930 PC-1 G02 11 3 20 1 3XSSC PC-1 G14 11 3 20 2 AT3G44150 PC-1 K02 11 3 20 3 3XSSC PC-1 K14 11 3 20 4 AT4G00810 PC-1 O02 11 3 20 5 3XSSC PC-1 O14 11 3 20 6 At4g35785 "transformer serine/arginine-rich ribonucleoprotein, putative similar to transformer-SR ribonucleoprotein [Nicotiana tabacum] gi|1781299|emb|CAA70700" 11 3 20 7 At4g35830 "aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) identical to SP|Q42560 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Arabidopsis thaliana}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain" 11 3 20 8 At4g35987 expressed protein ; expression supported by MPSS 11 3 20 9 At4g36040 DNAJ heat shock N-terminal domain-containing protein (J11) identical to dnaJ heat shock protein J11 [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain 11 3 20 10 At4g36170 hypothetical protein 11 3 20 11 At4g36210 expressed protein contains Pfam PF05277: Protein of unknown function (DUF726) 11 3 20 12 At4g36410 ubiquitin-conjugating enzyme 17 (UBC17) E2; identical to gi:2801446 11 3 20 13 At4g36470 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:jasmonic acid carboxyl methyltransferase (JMT)[GI:13676829] and to SAM:salicylic acid carboxyl methyltransferase (SAMT)[GI:6002712][Clarkia breweri] 11 3 20 14 At4g39120 inositol monophosphatase family protein low similarity to Mono-phosphatase [Streptomyces anulatus] GI:1045231; contains Pfam profile PF00459: Inositol monophosphatase family 11 3 20 15 At4g39180 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative phosphatidylinositol-phosphatidylcholine transfer protein SEC14, Yarrowia lipolytica, PIR2:S43745; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 11 3 20 16 At4g39290 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 11 3 20 17 At4g39340 hypothetical protein 11 3 20 18 At4g39480 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 11 3 20 19 At4g39540 shikimate kinase family protein similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202 11 3 20 20 At4g39690 expressed protein 11 3 20 21 At4g39745 hydroxyproline-rich glycoprotein family protein 11 3 20 22 At5g03260 "laccase, putative / diphenol oxidase, putative similar to laccase [Pinus taeda][GI:13661207]" 11 3 20 23 At5g03320 "protein kinase, putative similar to serine/threonine-protein kinase NAK [Arabidopsis thaliana] SWISS-PROT:P43293" 11 3 20 24 At5g03455 rhodanese-like domain-containing protein contains Rhodanese-like domain PF:00581 11 3 20 25 At5g03510 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 3 21 1 At5g03670 expressed protein 11 3 21 2 At5g03730 serine/threonine protein kinase (CTR1) identical to serine/threonine-protein kinase CTR1 [Arabidopsis thaliana] SWISS-PROT:Q05609 11 3 21 3 At5g03905 hesB-like domain-containing protein low similarity to HesB [Cyanothece sp. PCC 8801] GI:2183309; contains Pfam profile PF01521: HesB-like domain 11 3 21 4 At5g03960 calmodulin-binding family protein 11 3 21 5 At5g06540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 3 21 6 At5g06600 "ubiquitin-specific protease 12 (UBP12) almost identical to ubiquitin-specific protease 12 GI:11993471 [Arabidopsis thaliana], one amino acid difference" 11 3 21 7 At5g06770 KH domain-containing protein / zinc finger (CCCH type) family protein contains Pfam domains PF00013: KH domain and PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) 11 3 21 8 At5g06820 "leucine-rich repeat transmembrane protein kinase, putative " 11 3 21 9 At5g06980 expressed protein 11 3 21 10 At5g07040 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 21 11 At5g07200 gibberellin 20-oxidase identical to GI:1109699 11 3 21 12 At5g07250 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 11 3 21 13 At5g10350 "polyadenylate-binding protein family protein / PABP family protein contains weak similarity to poly(A) binding protein II from [Mus musculus] GI:2351846, [Xenopus laevis] GI:11527140; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 11 3 21 14 At5g10400 "histone H3 identical to several histone H3 proteins, including Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 11 3 21 15 At5g10580 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 11 3 21 16 At5g10620 "expressed protein contains Pfam profile PF02590: Uncharacterized ACR, COG1576" 11 3 21 17 At5g10760 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 11 3 21 18 At5g10820 "integral membrane transporter family protein contains 11 transmembrane domains; similar to folate/methotrexate transporter FT1 (GI:5813863) {Leishmania donovani}; lignostilbene-alpha,beta-dioxygenase gene, Synechococcus PCC7942, EMBL:AF055873" 11 3 21 19 At5g11000 expressed protein 11 3 21 20 At5g11040 expressed protein weak similarity to hypercellular protein [Aspergillus nidulans] GI:9309269 11 3 21 21 At5g14170 "SWIB complex BAF60b domain-containing protein similar to brahma associated protein 60 kDa [Drosophila melanogaster] GI:3378134, SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 [Homo sapiens] GI:4566530; contains Pfam profile PF02201: BAF60b domain of the SWIB complex" 11 3 21 22 At5g14240 expressed protein 11 3 21 23 At5g14410 expressed protein 11 3 21 24 At5g14470 GHMP kinase-related contains similarity to D-glycero-D-manno-heptose 7-phosphate kinase [Aneurinibacillus thermoaerophilus] gi|13491143|gb|AAK27850 11 3 21 25 At5g14610 "DEAD box RNA helicase, putative similar to RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF00397: WW domain" 11 3 22 1 At5g14680 universal stress protein (USP) family protein similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family 11 3 22 2 At5g14860 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 3 22 3 At5g14920 gibberellin-regulated family protein similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein 11 3 22 4 At5g17590 prothymosin alpha-related contains weak similarity to Prothymosin alpha (Swiss-Prot:P06454) [Homo sapiens] 11 3 22 5 At5g17650 "glycine/proline-rich protein glycine/proline-rich protein GPRP - Arabidopsis thaliana, EMBL:X84315" 11 3 22 6 At5g17790 "zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others" 11 3 22 7 At5g17850 "cation exchanger, putative (CAX8) similar to sodium/calcium exchanger protein [Mus musculus] gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 11 3 22 8 At5g18040 expressed protein 11 3 22 9 At5g18090 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 11 3 22 10 At5g18240 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 11 3 22 11 At5g18280 "apyrase (APY2) identical to apyrase GI:6006801, GI:7672685 from [Arabidopsis thaliana]" 11 3 22 12 At5g20885 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 22 13 At5g20930 "protein kinase, putative nearly identical to protein kinase tousled gi|433052|gb|AAA32874" 11 3 22 14 At5g21090 "leucine-rich repeat protein, putative similar to leucine rich repeat protein (LRP) GI:1619300 from [Lycopersicon esculentum]; contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 11 3 22 15 At5g21130 hypothetical protein 11 3 22 16 At5g21280 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 3 22 17 At5g22030 "ubiquitin-specific protease 8, putative (UBP8) similar to ubiquitin-specific protease 8 partial sequence GI:11993469 [Arabidopsis thaliana]" 11 3 22 18 At5g22160 hypothetical protein 11 3 22 19 At5g22210 expressed protein 11 3 22 20 At5g24860 expressed protein 11 3 22 21 At5g24910 "cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; similar to fatty acid omega-hydroxylase cytochrome P450 4A11 - Homo sapiens, PIR:I53015; supported by cDNA: gi_16604323_gb_AY058060.1_" 11 3 22 22 At5g25090 plastocyanin-like domain-containing protein 11 3 22 23 At5g25150 "transducin family protein / WD-40 repeat family protein similar to TBP-associated factor (GI:1732075) [Homo sapiens] and to 100 kDa subunit of Pol II transcription factor (GI:1491718) {Homo sapiens]; contains Pfam PF00400: WD domain, G-beta repeat (6 copies)|8689032|gb|AV528749.1|AV528749" 11 3 22 24 At5g25310 exostosin family protein contains Pfam profile: PF03016 Exostosin family 11 3 22 25 At5g25370 "phospholipase D, putative (PLDZETA) identical to phospholipase D zeta SP:P58766 from [Arabidopsis thaliana]; similar to phospholipase D [Lycopersicon esculentum] GI:12060550; contains Pfam profile PF00614: Phospholipase D. Active site motif" 11 3 23 1 At5g25475 expressed protein 11 3 23 2 At5g25520 transcription elongation factor-related contains weak similarity to transcription elongation factors 11 3 23 3 At5g28520 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 11 3 23 4 At5g28590 DNA-binding protein-related contains similarity to DNA-binding proteins 11 3 23 5 At5g28770 bZIP transcription factor family protein similar to seed storage protein opaque-2(bZIP family)GI:168428 from Zea mays; contains Pfam profile PF00170: bZIP transcription factor; identical to cDNA bZIP protein BZO2H3 GI:10954098 11 3 23 6 At5g28800 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 3 23 7 At5g28980 hypothetical protein contains Pfam profile PF02721: Domain of unknown function DUF223 11 3 23 8 At5g29050 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 3 23 9 At5g30510 "30S ribosomal protein S1, putative similar to Swiss-Prot:P29344 30S ribosomal protein S1, chloroplast precursor (CS1) [Spinacia oleracea]" 11 3 23 10 At5g31873 hypothetical protein 11 3 23 11 At5g37530 thiF family protein similar to SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia coli}; contains Pfam profile PF00899: ThiF family 11 3 23 12 At5g37590 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515: TPR Domain 11 3 23 13 At5g37780 "calmodulin-1/4 (CAM1) identical to calmodulin 4 [Arabidopsis thaliana] GI:16223, SP|P25854 Calmodulin-1/4 {Arabidopsis thaliana}" 11 3 23 14 At5g37840 "expressed protein predicted proteins, Arabidopsis thaliana" 11 3 23 15 At5g38020 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 11 3 23 16 At5g38070 "zinc finger (C3HC4-type RING finger) family protein contains InterPro Entry IPR001841 Zn-finger, RING; contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 11 3 23 17 At5g38240 "serine/threonine protein kinase, putative similar to receptor serine/threonine kinase PR55K gi|1235680|gb|AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 11 3 23 18 At5g38300 "expressed protein predicted protein, rice" 11 3 23 19 At5g41130 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 11 3 23 20 At5g41190 expressed protein ; expression supported by MPSS 11 3 23 21 At5g41370 "DNA repair protein, putative / TFIIH basal transcription factor complex helicase XPB subunit, putative (XPB1) contains Pfam profile PF00271:Helicase conserved C-terminal domain; identical to cDNA putative DNA repair protein (XPB1) GI:10314019" 11 3 23 22 At5g41440 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 3 23 23 At5g41610 "cation/hydrogen exchanger, putative (CHX18) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 3 23 24 At5g41670 "6-phosphogluconate dehydrogenase family protein contains Pfam profiles: PF00393 6-phosphogluconate dehydrogenase C-terminal domain, PF03446 NAD binding domain of 6-phosphogluconate" 11 3 23 25 At5g41800 "amino acid transporter family protein similar to amino acid permease 1 [Nicotiana sylvestris] GI:976402; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 11 3 24 1 At5g41860 expressed protein 11 3 24 2 At5g44510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 3 24 3 At5g44565 hypothetical protein 11 3 24 4 At5g44720 "molybdenum cofactor sulfurase family protein weak similarity to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains Pfam profiles PF03476: MOSC N-terminal beta barrel domain, PF03473: MOSC domain" 11 3 24 5 At5g44740 UMUC-like DNA repair family protein low similarity to DNA polymerase eta [Homo sapiens] GI:11463971; contains Pfam profile PF00817: ImpB/MucB/SamB family 11 3 24 6 At5g44920 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 11 3 24 7 At5g44950 F-box family protein contains F-box domain Pfam:PF00646 11 3 24 8 At5g45105 "metal transporter, putative (ZIP8) similar to putative metal transporter ZIP8 [Arabidopsis thaliana] gi|18997103|gb|AAL83293; similar to iron-regulated transporter 1 [Lycopersicon esculentum] gi|9716481|gb|AAF97509; member to the Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) family, PMID:11500563" 11 3 24 9 At5g45150 "ribonuclease III family protein similar to CAF protein (RNA helicase/RNAseIII) [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00035: Double-stranded RNA binding motif, PF00636 RNase3 domain" 11 3 24 10 At5g47700 60S acidic ribosomal protein P1 (RPP1C) 11 3 24 11 At5g47750 "protein kinase, putative similar to protein kinase G11A [Oryza sativa] SWISS-PROT:P47997" 11 3 24 12 At5g47900 hypothetical protein 11 3 24 13 At5g47960 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 11 3 24 14 At5g48140 "polygalacturonase, putative / pectinase, putative strong similarity to polygalacturonase PGA3 [Arabidopsis thaliana] GI:3152948; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 11 3 24 15 At5g48200 hypothetical protein 11 3 24 16 At5g48360 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 11 3 24 17 At5g48400 "glutamate receptor family protein (GLR1.2) plant glutamate receptor family, PMID:11379626" 11 3 24 18 At5g51100 "superoxide dismutase [Fe], putative / iron superoxide dismutase, putative similar to Fe-superoxide dismutase precursor [Medicago sativa] gi|16974682|gb|AAL32441" 11 3 24 19 At5g51150 expressed protein similar to unknown protein (gb|AAD46013.1) 11 3 24 20 At5g51290 ceramide kinase-related contains weak similarity to ceramide kinases (GI:21624342) [Mus musculus] 11 3 24 21 At5g51340 expressed protein 11 3 24 22 At5g51510 expressed protein 11 3 24 23 At5g51570 band 7 family protein similar to hypersensitive-induced response protein [Zea mays] GI:7716468; contains Pfam profile PF01145: SPFH domain / Band 7 family 11 3 24 24 At5g51710 "K+ efflux antiporter, putative (KEA5) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; related to glutathione-regulated potassium-efflux system protein [Escherichia coli] GP|606284|gb|AAA58147" 11 3 24 25 At5g51770 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 3 25 1 At5g54520 WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to pre-mRNA splicing factor PRP17 (SP:O60508) [Homo sapiens] 11 3 25 2 At5g54580 RNA recognition motif (RRM)-containing protein low similarity to RNA-binding protein RGP-3 [Nicotiana sylvestris] GI:1009363; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 11 3 25 3 At5g54710 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 11 3 25 4 At5g54760 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 11 3 25 5 At5g54910 "DEAD/DEAH box helicase, putative " 11 3 25 6 At5g54950 "aconitate hydratase-related / citrate hydro-lyase-related / aconitase-related similar to SP|Q42560 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Arabidopsis thaliana}" 11 3 25 7 At5g55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam domain PF01805: Surp module 11 3 25 8 At5g55135 hypothetical protein 11 3 25 9 At5g57830 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 11 3 25 10 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 11 3 25 11 At5g58020 "expressed protein contains PF04641: Protein of unknown function, DUF602" 11 3 25 12 At5g58080 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 11 3 25 13 At5g58240 "bis(5'-adenosyl)-triphosphatase, putative similar to bis(5'-adenosyl)-triphosphatase (Diadenosine 5',5'''- P1,P3-triphosphate hydrolase, Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE, Fragile histidine triad protein) [Homo sapiens] Swiss-Prot:P49789" 11 3 25 14 At5g58280 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 11 3 25 15 At5g58410 expressed protein contains similarity to hypothetical proteins 11 3 25 16 At5g58470 "zinc finger (Ran-binding) family protein weak similarity to SP|Q01844 RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein) {Homo sapiens}; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00641: Zn-finger in Ran binding protein and others" 11 3 25 17 At5g61060 histone deacetylase family protein similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 11 3 25 18 At5g61120 expressed protein 11 3 25 19 At5g61280 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 11 3 25 20 At5g61320 "cytochrome P450, putative Similar to Cytochrome P450 89A2 (SP:Q42602)[Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 11 3 25 21 At5g61480 "leucine-rich repeat transmembrane protein kinase, putative " 11 3 25 22 At5g61530 "small G protein family protein / RhoGAP family protein contains Pfam domain, PF00620: RhoGAP domain" 11 3 25 23 At5g61670 expressed protein 11 3 25 24 At5g61720 "expressed protein predicted protein, Arabidopsis thaliana" 11 3 25 25 At5g64410 oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}; contains Pfam profile PF03169: OPT oligopeptide transporter protein 11 3 26 1 At5g64460 expressed protein 11 3 26 2 At5g64600 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 11 3 26 3 At5g64640 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 3 26 4 At5g64790 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 11 3 26 5 At5g64816 expressed protein 11 3 26 6 At5g64980 expressed protein 11 3 26 7 At5g65010 asparagine synthetase 2 (ASN2) identical to asparagine synthetase (ASN2) [Arabidopsis thaliana] GI:3859536 11 3 26 8 At5g67540 glycosyl hydrolase family protein 43 contains similarity to xylanase GI:2645416 from [Caldicellulosiruptor saccharolyticus] 11 3 26 9 At5g67600 expressed protein 11 3 26 10 At2g29240 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g21020, At3g26530, At1g08760, At1g08740, At1g35650, At1g21030" 11 3 26 11 At5g36830 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 11 3 26 12 ath-MIR156f miRNA gene Arabidopsis thaliana miR156f stem-loop 11 3 26 13 ath-MIR169b miRNA gene Arabidopsis thaliana miR169b stem-loop 11 3 26 14 ath-MIR394a miRNA gene Arabidopsis thaliana miR394a stem-loop 11 3 26 15 ath-MIR399d miRNA gene Arabidopsis thaliana miR399d stem-loop 11 3 26 16 At3g43850 hypothetical protein similar to MTD1 [Medicago truncatula] GI:9294810 11 3 26 17 At3g43910 "hypothetical protein predicted protein, Arabidopsis thaliana" 11 3 26 18 At3g44110 "DNAJ heat shock protein, putative (J3) identical to AtJ3 [Arabidopsis thaliana] GI:2641638, strong similarity to several plant DnaJ proteins from PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region" 11 3 26 19 At3g44140 hypothetical protein 11 3 26 20 At3g44320 nitrilase 3 (NIT3) identical to SP|P46010 Nitrilase 3 (EC 3.5.5.1) {Arabidopsis thaliana} 11 3 26 21 At3g44380 "expressed protein predicted proteins, Arabidopsis thaliana" 11 3 26 22 At3g44590 "60S acidic ribosomal protein P2 (RPP2D) acidic ribosomal protein P2, maize, PIR:S54179" 11 3 26 23 At3g44630 "disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein., closest Col-0 homolog to RPP1-WsB" 11 3 26 24 Blank Blank 11 3 26 25 Blank Blank 11 4 1 1 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 11 4 1 2 atc06 Randomly generated negative control 11 4 1 3 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 11 4 1 4 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 11 4 1 5 Alien2 Control: Stratagene Spotreport Alien Oligo 11 4 1 6 Alien8 Control: Stratagene Spotreport Alien Oligo 11 4 1 7 atc04 Randomly generated negative control 11 4 1 8 atc10 Randomly generated negative control 11 4 1 9 At1g02813 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 11 4 1 10 At1g02840 pre-mRNA splicing factor SF2 (SF2) / SR1 protein identical to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana} 11 4 1 11 At1g02950 "glutathione S-transferase, putative similar to glutathione-S-transferase GI:169887 from [Silene vulgaris]" 11 4 1 12 At1g02980 cullin family protein similar to cullin 1 [Homo sapiens] GI:3139077; contains Pfam profile PF00888: Cullin family 11 4 1 13 At1g03103 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile PF00234:Protease inhibitor/seed storage/LTP family; low similarity to SP:Q42978 Nonspecific lipid-transfer protein 2 precursor (LTP 2) {Oryza sativa} 11 4 1 14 At1g03150 "GCN5-related N-acetyltransferase (GNAT) family protein similar to SP|P07347 N-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 11 4 1 15 At1g03330 "small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative similar to SWISS-PROT:Q9Y333 U6 snRNA-associated Sm-like protein LSm2 (Small nuclear ribonuclear protein D homolog, G7b, SnRNP core SM-like protein SM-x5) [Homo sapiens]" 11 4 1 16 At1g03390 transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458 11 4 1 17 At1g06050 expressed protein 11 4 1 18 At1g06110 F-box family protein contains similarity to F-box protein FBX3 GI:6103643 from [Homo sapiens] ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 11 4 1 19 At1g06230 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 11 4 1 20 At1g06290 "acyl-CoA oxidase (ACX3) identical to acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758, GI:8515709" 11 4 1 21 At1g06470 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 11 4 1 22 At1g06530 "myosin heavy chain-related similar to myosin heavy chain (GI:1408194) {Placopecten magellanicus}; similar to Myosin heavy chain, clone 203 (Fragment) (SP:P39922){Hydra attenuata}; contains one transmembrane domain" 11 4 1 23 At1g06700 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 11 4 1 24 At1g06770 zinc finger (C3HC4-type RING finger) family protein 11 4 1 25 At1g09250 expressed protein 11 4 2 1 At1g09300 "metallopeptidase M24 family protein similar to SP|P15034 Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro aminopeptidase) (Aminopeptidase P II) (Aminoacylproline aminopeptidase) {Escherichia coli}; contains Pfam profiles PF00557: metallopeptidase family M24, PF05195: Aminopeptidase P, N-terminal domain" 11 4 2 2 At1g09470 expressed protein ; expression supported by MPSS 11 4 2 3 At1g09500 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 11 4 2 4 At1g09660 "KH domain-containing quaking protein, putative similar to GB:AAC67357" 11 4 2 5 At1g09700 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif; supporting cDNA gi|12247456|gb|AF276440.1|AF276440 11 4 2 6 At1g09840 shaggy-related protein kinase kappa / ASK-kappa (ASK10) identical to shaggy-related protein kinase kappa SP:Q39019 GI:717180 from [Arabidopsis thaliana] 11 4 2 7 At1g09900 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 4 2 8 At1g12470 Pep3/Vps18/deep orange family protein contains Pfam profile PF05131: Pep3/Vps18/deep orange family; similar to Vacuolar protein sorting 18 (hVPS18) (SP:Q9P253) {Homo sapiens} 11 4 2 9 At1g12540 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 4 2 10 At1g12730 cell division cycle protein-related contains 10 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 11 4 2 11 At1g12790 expressed protein 11 4 2 12 At1g12950 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: MatE 11 4 2 13 At1g13020 "eukaryotic translation initiation factor, putative (EIF4B5) eukaryotic initiation factor 4B (GI:6739522) {Arabidopsis thaliana}; EST gb|T22808 comes from this gene" 11 4 2 14 At1g13190 RNA recognition motif (RRM)-containing protein 11 4 2 15 At1g13230 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to gb|U42445 Cf-2.2 from Lycopersicon pimpinellifolium" 11 4 2 16 At1g15890 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 11 4 2 17 At1g15930 40S ribosomal protein S12 (RPS12A) similar to 40S ribosomal protein S12 GI:4263712 from [Arabidopsis thaliana] 11 4 2 18 At1g16080 expressed protein 11 4 2 19 At1g16150 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 11 4 2 20 At1g16330 "cyclin family protein similar to SP|P25011 G2/mitotic-specific cyclin S13-6 (B-like cyclin) {Glycine max}; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 11 4 2 21 At1g16390 "organic cation transporter-related low similarity to Organic cation/carnitine transporter 2 (Solute carrier family 22, member 5) (High-affinity sodium-dependent carnitine cotransporter) from {Homo sapiens} SP|O76082, {Rattus norvegicus} SP|O70594; contains Pfam profile PF00083: major facilitator superfamily protein" 11 4 2 22 At1g16540 molybdenum cofactor sulfurase (LOS5) (ABA3) identical to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; supporting cDNA gi|15407261|gb|AY034895.1| 11 4 2 23 At1g16610 "arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana]" 11 4 2 24 At1g19394 expressed protein 11 4 2 25 At1g19450 "integral membrane protein, putative / sugar transporter family protein similar to GB:U43629 GI:1209756 integral membrane protein from [Beta vulgaris]; contains Pfam profile PF00083: major facilitator superfamily protein; contains TIGRfam TIGR00879: Sugar transporter" 11 4 3 1 At1g19630 cytochrome P450 family protein similar to Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana] 11 4 3 2 At1g19690 expressed protein similar to (SP:P76370) Protein yeeZ precursor. {Escherichia coli O157:H7} 11 4 3 3 At1g19880 regulator of chromosome condensation (RCC1) family protein low similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 11 4 3 4 At1g19940 "glycosyl hydrolase family 9 protein similar to endo-beta-1,4-D-glucanase GI:4165132 from [Lycopersicon esculentum]" 11 4 3 5 At1g20130 "family II extracellular lipase, putative contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)" 11 4 3 6 At1g20200 "26S proteasome regulatory subunit S3, putative (RPN3) similar to SP:Q06364 from [Daucus carota]" 11 4 3 7 At1g22920 "COP9 signalosome subunit 5B / CSN subunit 5B (CSN5B) / c-JUN coactivator protein AJH1, putative (AJH1) COP9 complex subunit CSN5-1; identical to Arabidopsis homologs of a c-Jun coactivator AJH1 GI:3641314 from [Arabidopsis thaliana]; identical to cDNA CSN complex subunit 5B (CSN5B) GI:18056662; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 11 4 3 8 At1g22980 expressed protein 11 4 3 9 At1g23110 hypothetical protein 11 4 3 10 At1g23170 "expressed protein Location of ESTs gb|AA395014, gb|T23026, gb|N65311 and gb|N37226; expression supported by MPSS" 11 4 3 11 At1g23320 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 11 4 3 12 At1g23360 "UbiE/COQ5 methyltransferase family protein similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase GB:BAA25267 GI:2982680 from [Micrococcus luteus]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 11 4 3 13 At1g23510 expressed protein 11 4 3 14 At1g23550 expressed protein 11 4 3 15 At1g27270 paired amphipathic helix repeat-containing protein contains Pfam profile PF02671: Paired amphipathic helix repeat 11 4 3 16 At1g27330 expressed protein similar to EST gb|AA650671 and gb|T20610 11 4 3 17 At1g27450 adenine phosphoribosyltransferase 1 (APT1) nearly identical to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana} 11 4 3 18 At1g27490 hypothetical protein similar to MYB transcription factor isolog (AC002335) 11 4 3 19 At1g27650 "U2 snRNP auxiliary factor small subunit, putative Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small subunit from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come from this gene" 11 4 3 20 At1g27700 expressed protein 11 4 3 21 At1g27870 hypothetical protein 11 4 3 22 At1g27930 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 11 4 3 23 At1g30840 "purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profiles PF03151: Domain of unknown function, DUF250, PF00892: Integral membrane protein" 11 4 3 24 At1g30890 integral membrane HRF1 family protein contains Pfam domain PF03878: Hrf1 family 11 4 3 25 At1g31090 F-box family protein contains Pfam PF00646: F-box domain 11 4 4 1 At1g31163 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 11 4 4 2 At1g31335 expressed protein 11 4 4 3 At1g31390 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 11 4 4 4 At1g31580 expressed protein identical to ORF1 [Arabidopsis thaliana] gi|457716|emb|CAA50905 11 4 4 5 At1g31660 bystin family contains Pfam profile: PF05291 Bystin 11 4 4 6 At1g34720 hypothetical protein 11 4 4 7 At1g34770 MAGE-8 antigen-related contains weak similarity to Swiss-Prot:P43361 melanoma-associated antigen 8 (MAGE-8 antigen) [Homo sapiens] 11 4 4 8 At1g35210 expressed protein 11 4 4 9 At1g35290 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 11 4 4 10 At1g35510 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 11 4 4 11 At1g35550 elongation factor Tu C-terminal domain-containing protein similar to SP|P13905 Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis thaliana}; contains Pfam profile PF03143: Elongation factor Tu C-terminal domain 11 4 4 12 At1g35730 pumilio/Puf RNA-binding domain-containing protein 11 4 4 13 At1g35850 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 11 4 4 14 At1g47410 expressed protein identical to hypothetical protein GB:AAD46041 GI:5668815 from (Arabidopsis thaliana) 11 4 4 15 At1g47490 "RNA-binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nicotiana tabacum]" 11 4 4 16 At1g47655 Dof-type zinc finger domain-containing protein 11 4 4 17 At1g47720 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) 11 4 4 18 At1g47840 "hexokinase, putative similar to hexokinase 1 [Arabidopsis thaliana] Swiss-Prot:Q42525" 11 4 4 19 At1g47920 syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; 11 4 4 20 At1g48100 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 11 4 4 21 At1g48150 "MADS-box protein (AGL74 ) similar to GB:CAA73304 from [Arabidopsis thaliana] (Gene 215 (1), 11-17 (1998)); contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); PMID: 12837945" 11 4 4 22 At1g51210 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 4 4 23 At1g51270 "vesicle-associated membrane protein, putative / VAMP, putative similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia]" 11 4 4 24 At1g51410 "cinnamyl-alcohol dehydrogenase, putative (CAD) similar to GB:X88797 from [Eucalyptus gunnii] (Plant Mol. Biol. 36 (5), 755-765 (1998))" 11 4 4 25 At1g51470 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to Myrosinase precursor (SP:P37702) [Arabidopsis thaliana]; similar to thioglucosidase (GI:871992) [Arabidopsis thaliana] 11 4 5 1 At1g51610 "cation efflux family protein / metal tolerance protein, putative (MTPc4) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 11 4 5 2 At1g51670 expressed protein 11 4 5 3 At1g51805 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 11 4 5 4 At1g51860 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 11 4 5 5 At1g54480 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]" 11 4 5 6 At1g54540 hypothetical protein 11 4 5 7 At1g54730 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 11 4 5 8 At1g54780 thylakoid lumen 18.3 kDa protein SP:Q9ZVL6 11 4 5 9 At1g54930 "zinc knuckle (CCHC-type) family protein contains INTERPRO domain, IPR001878: Zn-finger CCHC type" 11 4 5 10 At1g54980 invertase/pectin methylesterase inhibitor family protein contains similarity to pollen-specific protein Bnm1 GI:1857670 from [Brassica napus]; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 11 4 5 11 At1g55170 expressed protein 11 4 5 12 At1g55230 hypothetical protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 11 4 5 13 At1g59700 "glutathione S-transferase, putative similar to glutathione S-transferase GB:AAF29773 GI:6856103 from [Gossypium hirsutum]" 11 4 5 14 At1g59740 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 11 4 5 15 At1g59865 expressed protein 11 4 5 16 At1g59920 hypothetical protein 11 4 5 17 At1g60090 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 11 4 5 18 At1g60170 pre-mRNA processing ribonucleoprotein binding region-containing protein similar to U4/U6 snRNP-associated 61 kDa protein [Homo sapiens] GI:18249847; contains Pfam profile PF01798: Putative snoRNA binding domain 11 4 5 19 At1g60410 F-box family protein contains F-box domain Pfam:PF00646 11 4 5 20 At1g60470 "galactinol synthase, putative similar to galactinol synthase GI:5608497 from [Ajuga reptans]" 11 4 5 21 At1g63300 "expressed protein similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae]; similar to Myosin II heavy chain, non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum]" 11 4 5 22 At1g63360 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 11 4 5 23 At1g63550 hypothetical protein low similarity to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam profile: PF01657 Domain of unknown function DUF26 11 4 5 24 At1g63610 expressed protein 11 4 5 25 At1g63730 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 4 6 1 At1g63780 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 11 4 6 2 At1g63940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase GB:AAD28178 [Brassica juncea]" 11 4 6 3 At1g63970 "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GI:7621712 from [Catharanthus roseus]" 11 4 6 4 At1g66770 nodulin MtN3 family protein contains Pfam PF03083 MtN3/saliva family; similar to LIM7 (cDNAs induced in meiotic prophase in lily microsporocytes) GI:431154 from [Lilium longiflorum] 11 4 6 5 At1g66830 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profiles: PF00069: Eukaryotic protein kinase domain, multiple PF00560: Leucine Rich Repeat" 11 4 6 6 At1g67000 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 11 4 6 7 At1g67050 expressed protein 11 4 6 8 At1g67210 "proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein contains Pfam domains PF00098: Zinc knuckle, PF04046: PSP" 11 4 6 9 At1g67290 glyoxal oxidase-related contains similarity to glyoxal oxidase precursor [Phanerochaete chrysosporium] gi|1050302|gb|AAA87594 11 4 6 10 At1g67450 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to hypothetical protein GI:7268472 from [Arabidopsis thaliana] 11 4 6 11 At1g67500 DNA polymerase family B protein similar to SP|Q61493 DNA polymerase zeta catalytic subunit (EC 2.7.7.7) {Mus musculus}; contains Pfam profile PF00136: DNA polymerase family B 11 4 6 12 At1g70140 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 11 4 6 13 At1g70180 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 11 4 6 14 At1g70370 "BURP domain-containing protein / polygalacturonase, putative similar to polygalacturonase isoenzyme 1 beta subunit [Lycopersicon esculentum] GI:170480; contains Pfam profile PF03181: BURP domain" 11 4 6 15 At1g70410 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 11 4 6 16 At1g70550 expressed protein similar to hypothetical protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16072 [Arabidopsis thaliana] contains Pfam profile PF03080: Arabidopsis proteins of unknown function 11 4 6 17 At1g70590 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 11 4 6 18 At1g70760 inorganic carbon transport protein-related contains weak similarity to Swiss-Prot:P27372 inorganic carbon transport protein [Synechocystis sp.] 11 4 6 19 At1g70800 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain; identical to unknown protein GB:AAD55495 [Arabidopsis thaliana] 11 4 6 20 At1g73650 expressed protein 11 4 6 21 At1g73670 "mitogen-activated protein kinase, putative / MAPK, putative (MPK15) similar to mitogen-activated protein kinase GB:A56042 [Dictyostelium discoideum]; mitogen-activated protein kinase (MAPK)(AtMPK15), PMID:12119167; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 11 4 6 22 At1g73840 hydroxyproline-rich glycoprotein family protein similar to proline-rich protein precursor GB:AAC34889 [Glycine max] 11 4 6 23 At1g73885 expressed protein 11 4 6 24 At1g74050 60S ribosomal protein L6 (RPL6C) similar to 60S ribosomal protein L6 (YL 16 like) GB:CAB57309 from [Cyanophora paradoxa] 11 4 6 25 At1g74100 sulfotransferase family protein similar to SP|P52837 Flavonol 4'-sulfotransferase (EC 2.8.2.-) (F4-ST) {Flaveria chloraefolia}; contains Pfam profile PF00685: Sulfotransferase domain 11 4 7 1 At1g74280 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 11 4 7 2 At1g74330 "protein kinase, putative similar to cyclin dependent kinase C [Lycopersicon esculentum] gi|15215944|emb|CAC51391; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 11 4 7 3 AT5G57480 PC-1 D02 11 4 7 4 3XSSC PC-1 D14 11 4 7 5 AT1G29930 PC-1 H02 11 4 7 6 3XSSC PC-1 H14 11 4 7 7 AT3G44150 PC-1 L02 11 4 7 8 3XSSC PC-1 L14 11 4 7 9 AT4G00810 PC-1 P02 11 4 7 10 3XSSC PC-1 P14 11 4 7 11 At1g77100 "peroxidase, putative similar to cationic peroxidase [Arachis hypogaea] gi|166475|gb|AAA32676" 11 4 7 12 At1g77145 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 11 4 7 13 At1g77330 "1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from [Sorghum bicolor]" 11 4 7 14 At1g77390 "cyclin, putative similar to mitotic cyclin a2-type [Glycine max] GI:857397; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 11 4 7 15 At1g77550 "tubulin-tyrosine ligase family protein contains tubulin-tyrosine ligase family domain, Pfam:PF03133" 11 4 7 16 At1g77620 expressed protein 11 4 7 17 At1g77770 expressed protein 11 4 7 18 At1g77810 galactosyltransferase family protein contains Pfam profile PF01762: Galactosyltransferase 11 4 7 19 At1g80380 phosphoribulokinase/uridine kinase-related 11 4 7 20 At1g80420 "DNA repair protein, putative (XRCC1) identical to putative DNA repair protein XRCC1 [Arabidopsis thaliana] GI:11181954; contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 11 4 7 21 At1g80600 "acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative similar to SP|O04866 Acetylornithine aminotransferase, mitochondrial precursor (EC 2.6.1.11) (ACOAT) (Acetylornithine transaminase) (AOTA) {Alnus glutinosa}; contains Pfam profile PF00202: aminotransferase, class III" 11 4 7 22 At1g80660 "ATPase 9, plasma membrane-type, putative / proton pump 9, putative / proton-exporting ATPase, putative strong similarity to SP|Q42556 ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9) {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type" 11 4 7 23 At1g80840 WRKY family transcription factor similar to WRKY transcription factor GB:BAA87058 GI:6472585 from [Nicotiana tabacum] 11 4 7 24 At1g80870 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 11 4 7 25 At2g01060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 11 4 8 1 At2g01100 expressed protein 11 4 8 2 At2g04039 expressed protein 11 4 8 3 At2g04066 MATE efflux protein-related similar to multidrug secondary transporter-like TRANSPARENT TESTA 12 protein (Swiss-Prot:Q9LYT3) [Arabidopsis thaliana]; supported by tandem duplication of (GI:4734008) (TIGR_Ath1:At2g04070) [Arabidopsis thaliana] 11 4 8 4 At2g04320 expressed protein 11 4 8 5 At2g04380 expressed protein 11 4 8 6 At2g04550 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 11 4 8 7 At2g04600 hypothetical protein 11 4 8 8 At2g04840 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 11 4 8 9 At2g04870 hypothetical protein 11 4 8 10 At2g12100 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At5g28270, At2g05450, At1g45090, At2g16180, At2g06750" 11 4 8 11 At2g12190 "cytochrome P450, putative " 11 4 8 12 At2g12900 hypothetical protein similar to transcription factor(bZIP family) VSF-1 GI:3425907 from [Lycopersicon esculentum] 11 4 8 13 At2g13100 "glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative similar to glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982; contains Pfam profile PF00083: major facilitator superfamily protein" 11 4 8 14 At2g13550 expressed protein 11 4 8 15 At2g13630 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens] 11 4 8 16 At2g13840 PHP domain-containing protein contains Pfam PF02231: PHP domain N-terminal region and Pfam PF02811: PHP domain C-terminal region; identical to Protein trpH. (Swiss-Prot:O54453) [Salmonella typhimurium] 11 4 8 17 At2g13980 hypothetical protein 11 4 8 18 At2g17210 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 11 4 8 19 At2g17265 homoserine kinase (HSK) identical to homoserine kinase [Arabidopsis thaliana] gi|4927412|gb|AAD33097 11 4 8 20 At2g17450 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 4 8 21 At2g17525 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat; gene structure supported by cDNA sequence and Brassica genome sequence alignments. 11 4 8 22 At2g17695 expressed protein 11 4 8 23 At2g17740 DC1 domain-containing protein 11 4 8 24 At2g17900 "zinc finger (MYND type) family protein / SET domain-containing protein contains Pfam profiles PF00856: SET domain, PF01753: MYND zinc finger (ZnF) domain; confirmed by cDNA (Paola Vittorioso--accession not assigned yet (paola.vittorioso@uniroma1.it)" 11 4 8 25 At2g17970 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to At2g17960, At4g36090; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 11 4 9 1 At2g20680 glycosyl hydrolase family 5 protein / cellulase family protein similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5) 11 4 9 2 At2g20740 expressed protein 11 4 9 3 At2g20830 expressed protein weak similarity to formiminotransferase cyclodeaminase (GI:3980064) [Gallus gallus] 11 4 9 4 At2g20875 hypothetical protein 11 4 9 5 At2g21040 C2 domain-containing protein low similarity to phloem protein [Cucurbita maxima] GI:4164541; contains Pfam profile PF00168: C2 domain 11 4 9 6 At2g21090 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 11 4 9 7 At2g21230 bZIP family transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036) 11 4 9 8 At2g21260 "mannose 6-phosphate reductase (NADPH-dependent), putative similar to NADPH-dependent mannose 6-phosphate reductase [Apium graveolens][GI:1835701], NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Malus domestica][SP|P28475]" 11 4 9 9 At2g24140 "expressed protein contains Pfam PF04576: Protein of unknown function, DUF593" 11 4 9 10 At2g24210 myrcene/ocimene synthase (TPS10) nearly identical to GI:9957293; contains Pfam profile: PF01397 terpene synthase family 11 4 9 11 At2g24370 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 4 9 12 At2g24430 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 11 4 9 13 At2g24600 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 11 4 9 14 At2g24650 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 11 4 9 15 At2g24840 MADS-box family protein 11 4 9 16 At2g24910 hypothetical protein 11 4 9 17 At2g27590 expressed protein 11 4 9 18 At2g27670 hypothetical protein contains Pfam profile PF02713: Domain of unknown function DUF220 11 4 9 19 At2g27790 expressed protein 11 4 9 20 At2g27840 histone deacetylase-related / HD-related similar to nucleolar histone deacetylase HD2-p39 [Zea mays] GI:2257756; contains non-consensus donor splice site AT at exon2 and acceptor splice site AC at exon3. 11 4 9 21 At2g28030 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 11 4 9 22 At2g28080 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 4 9 23 At2g28240 hydroxyproline-rich glycoprotein family protein 11 4 9 24 At2g28290 "chromatin remodeling protein, putative (SYD) similar to transcriptional activator HBRM [Homo sapiens] GI:414117; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; identical to cDNA putative chromatin remodeling protein SYD (SPLAYED) GI:13603720" 11 4 9 25 At2g31020 "oxysterol-binding family protein similar to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 11 4 10 1 At2g31070 "TCP family transcription factor, putative similar to TCP1 protein (GI:20269127) {Lupinus albus} and cycloidea (GI:12002867) [Lycopersicon esculentum]" 11 4 10 2 At2g31215 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 4 10 3 At2g31270 hydroxyproline-rich glycoprotein family protein 11 4 10 4 At2g31410 expressed protein 11 4 10 5 At2g31470 F-box family protein contains F-box domain Pfam:PF00646 11 4 10 6 At2g31620 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] 11 4 10 7 At2g31700 hypothetical protein 11 4 10 8 At2g34290 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 4 10 9 At2g34315 disease resistance protein-related similar to SP|P54120 AIG1 protein {Arabidopsis thaliana} 11 4 10 10 At2g34430 chlorophyll A-B binding protein / LHCII type I (LHB1B1) identical to photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16366 11 4 10 11 At2g34490 cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae}; contains Pfam profile: PF00067 cytochrome P450; supported by full-length cDNA: Ceres:158108. 11 4 10 12 At2g34640 expressed protein 11 4 10 13 At2g34690 expressed protein 11 4 10 14 At2g34880 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 11 4 10 15 At2g34930 "disease resistance family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.1 [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779" 11 4 10 16 At2g37520 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 11 4 10 17 At2g37570 expressed protein 11 4 10 18 At2g37730 fringe-related protein similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 11 4 10 19 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 11 4 10 20 At2g37930 expressed protein 11 4 10 21 At2g37980 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 11 4 10 22 At2g38150 "alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162] ; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif" 11 4 10 23 At2g38185 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 11 4 10 24 At2g40750 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 11 4 10 25 At2g40790 thioredoxin family protein contains Pfam profile: PF00085 thioredoxin 11 4 11 1 At2g40930 "ubiquitin-specific protease 5, putative (UBP5) similar to GI:6648604" 11 4 11 2 At2g40955 hypothetical protein 11 4 11 3 At2g41120 expressed protein 11 4 11 4 At2g41170 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 11 4 11 5 At2g41350 expressed protein 11 4 11 6 At2g41410 "calmodulin, putative identical to SP|P30188 Calmodulin-like protein {Arabidopsis thaliana}" 11 4 11 7 At2g43970 La domain-containing protein contains Pfam profile PF05383: La domain 11 4 11 8 At2g44010 expressed protein 11 4 11 9 At2g44140 autophagy 4a (APG4a) identical to autophagy 4a [Arabidopsis thaliana] gi|19912143|dbj|BAB88383 11 4 11 10 At2g44195 hypothetical protein 11 4 11 11 At2g44370 DC1 domain-containing protein highly similar to GP|2435515|AF024504 11 4 11 12 At2g44430 "DNA-binding bromodomain-containing protein contains Pfam domains, Pfam PF00439: Bromodomain and PF00249: Myb-like DNA-binding domain" 11 4 11 13 At2g44580 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 4 11 14 At2g44630 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF00646: F-box domain, PF01344: Kelch motif" 11 4 11 15 At2g47310 flowering time control protein-related / FCA gamma-related 11 4 11 16 At2g47360 expressed protein 11 4 11 17 At2g47510 "fumarate hydratase, putative / fumarase, putative similar to SP|P55250 Fumarate hydratase, mitochondrial precursor (EC 4.2.1.2) (Fumarase) {Rhizopus oryzae}; contains Pfam profile PF00206: Lyase" 11 4 11 18 At2g47570 60S ribosomal protein L18 (RPL18A) 11 4 11 19 At2g47730 "glutathione S-transferase 6 (GST6) identical to GB:X95295. Based on identical cDNA hits, the translation is now 40 AAs longer at the N-terminal, and start of exon2 is also corrected." 11 4 11 20 At2g47800 glutathione-conjugate transporter (MRP4) identical to AtMRP4 GI:2959767 from [Arabidopsis thaliana] 11 4 11 21 At2g47920 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 11 4 11 22 At2g47970 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 11 4 11 23 At3g03300 DEAD/DEAH box helicase carpel factory-related similar to RNA helicase GB:AAF03534 11 4 11 24 At3g03350 short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profile PF00106: short chain dehydrogenase 11 4 11 25 At3g03530 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 11 4 12 1 At3g03590 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 11 4 12 2 At3g03760 LOB domain protein 20 / lateral organ boundaries domain protein 20 (LBD20) identical to SP|Q9SRV3 LOB domain protein 20 {Arabidopsis thaliana} 11 4 12 3 At3g03800 "syntaxin, putative (SYP131) similar to SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana}" 11 4 12 4 At3g03950 expressed protein contains Pfam profile PF04146: YT521-B-like family 11 4 12 5 At3g03970 expressed protein 11 4 12 6 At3g06510 glycosyl hydrolase family 1 protein similar to Beta-galactosidase (SP:P22498) [Sulfolobus solfataricus}; almost identical to beta-glucosidase GB:AAF23823 GI:6685165 from [Arabidopsis thaliana] 11 4 12 7 At3g06550 O-acetyltransferase-related similar to O-acetyltransferase (GI:17063556) [Cryptococcus neoformans var. neoformans]; contains 7 transmembrane domains 11 4 12 8 At3g66656 MADS-box family protein contains Pfam profile: PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 11 4 12 9 At3g06690 "acyl-CoA oxidase family similar to acyl-CoA oxidase [Arabidopsis thaliana] GI:8515709, acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758; contains Pfam profile PF01756: Acyl-CoA oxidase" 11 4 12 10 At3g06870 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 11 4 12 11 At3g06930 protein arginine N-methyltransferase family protein similar to protein arginine methyltransferase [Mus musculus] GI:5257221 11 4 12 12 At3g07080 membrane protein contains Pfam profile: PF00892 Integral membrane protein 11 4 12 13 At3g07140 "GPI transamidase component Gpi16 subunit family protein similar to phosphatidyl inositol glycan class T (GI:14456615) [Homo sapiens]; contains Pfam profile PF04113: Gpi16 subunit, GPI transamidase component" 11 4 12 14 At3g10160 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS3) nearly identical to gi:17976757 11 4 12 15 At3g10230 lycopene beta cyclase (LYC) identical to lycopene beta cyclase GI:1399183|GB:AAB53337 [Arabidopsis thaliana] 11 4 12 16 At3g10360 pumilio/Puf RNA-binding domain-containing protein similar to RNA binding protein PufA GB:AAD39751 [Dictyostelium discoideum] and similar to Pumilio protein GB:A46221 [Drosophila sp.] 11 4 12 17 At3g10410 "serine carboxypeptidase III, putative similar to serine carboxypeptidase III from Oryza sativa SP|P37891, Matricaria chamomilla GI:6960455, Hordeum vulgare SP|P21529, Triticum aestivum SP|P11515; contains Pfam profile PF0450 serine carboxypeptidase" 11 4 12 18 At3g10540 "3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166" 11 4 12 19 At3g10585 myb family transcription factor / I-box binding factor-related protein conrains simiilarity to I-box binding factor GI:6688529 from [Lycopersicon esculentum]; similar to transcription factor MYBS1 (GI:24850303) [Oryza sativa (japonica cultivar-group)] 11 4 12 20 At3g10720 "pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase" 11 4 12 21 At3g10770 expressed protein 11 4 12 22 At3g13200 Cwf15 / Cwc15 cell cycle control family protein contains Pfam profile PF04889: Cwf15/Cwc15 cell cycle control protein; similar to Cell cycle control protein cwf15 (Swiss-Prot:P78794) [Schizosaccharomyces pombe] 11 4 12 23 At3g13225 WW domain-containing protein contains Pfam profile PF00397: WW domain 11 4 12 24 At3g13350 "high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein low similarity to Dead Ringer Protein Chain A Dna-Binding Domain (GI:6573608), Arid-Dna Complex (GI:20150982) from [Drosophila melanogaster]; contains Pfam profiles PF00505: HMG (high mobility group) box, PF01388: ARID/BRIGHT DNA binding domain" 11 4 12 25 At3g13410 expressed protein 11 4 13 1 At3g13570 "SC35-like splicing factor, 30a kD (SCL30a) almost identical to SC35-like splicing factor SCL30a GI:9843661 from [Arabidopsis thaliana]; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 11 4 13 2 At3g13610 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to desacetoxyvindoline 4-hydroxylase [Catharanthus roseus][GI:1916643], flavonol synthase 1 [SP|Q96330]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 11 4 13 3 At3g13720 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 11 4 13 4 At3g13772 "endomembrane protein 70, putative TM4 family;" 11 4 13 5 At3g16250 ferredoxin-related contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domains 11 4 13 6 At3g16310 mitotic phosphoprotein N' end (MPPN) family protein contains Pfam profile PF05172: MPPN (Mitotic PhosphoProtein N' end) (rrm-like) domain 11 4 13 7 At3g16490 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 11 4 13 8 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 4 13 9 At3g16680 expressed protein ; expression supported by MPSS 11 4 13 10 At3g16740 F-box family protein contains F-box domain Pfam:PF00646 11 4 13 11 At3g16880 F-box protein-related contains weak hit to Pfam PF00646: F-box domain; contains weak hit to TIGRFAM TIGR01640: F-box protein interaction domain 11 4 13 12 At3g16930 hypothetical protein 11 4 13 13 At3g19560 F-box family protein contains weak hit to Pfam PF00646: F-box domain;; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 11 4 13 14 At3g19600 NLI interacting factor (NIF) family protein low similarity to CTD phosphatase [Xenopus laevis] GI:13487713; contains Pfam profile PF03031: NLI interacting factor 11 4 13 15 At3g19780 expressed protein 11 4 13 16 At3g19840 "FF domain-containing protein / WW domain-containing protein weak similarity to transcription factor CA150b [Mus musculus] GI:6329166; contains Pfam profiles PF01846: FF domain, PF00397: WW domain" 11 4 13 17 At3g20010 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to transcription factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 4 13 18 At3g20060 ubiquitin-conjugating enzyme 19 (UBC19) nearly identical to ubiquitin-conjugating enzyme UBC19 [Arabidopsis thaliana] GI:22530865; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 11 4 13 19 At3g20200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 11 4 13 20 At3g20260 expressed protein 11 4 13 21 At3g22970 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 11 4 13 22 At3g23030 auxin-responsive protein / indoleacetic acid-induced protein 2 (IAA2) identical to SP|P49678 Auxin-responsive protein IAA2 (Indoleacetic acid-induced protein 2) {Arabidopsis thaliana} 11 4 13 23 At3g23175 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]; contains Pfam profile PF05514: HR-like lesion-inducing" 11 4 13 24 At3g23230 "ethylene-responsive factor, putative similar to EREBP-4 GB:BAA07323 from [Nicotiana tabacum]" 11 4 13 25 At3g23370 expressed protein ; expression supported by MPSS 11 4 14 1 At3g23430 "phosphate transporter, putative (PHO1) identical to PHO1 protein [Arabidopsis thaliana] GI:20069032; supporting cDNA gi|20069031|gb|AF474076.1|; contains Pfam profiles PF03124: EXS family and PF03105: SPX domain" 11 4 14 2 At3g23630 adenylate isopentenyltransferase 7 / cytokinin synthase (IPT7) identical to adenylate isopentenyltransferase (IPT7) [Arabidopsis thaliana] GI:14279066 11 4 14 3 At3g23685 F-box family protein contains TIGR01640: F-box protein interaction domain 11 4 14 4 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 11 4 14 5 At3g26560 "ATP-dependent RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, PF00575: S1 RNA binding domain" 11 4 14 6 At3g26680 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 11 4 14 7 At3g26720 glycosyl hydrolase family 38 protein similar to lysosomal alpha-mannosidase GI:3522867 from [Homo sapiens] 11 4 14 8 At3g26860 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 11 4 14 9 At3g26910 hydroxyproline-rich glycoprotein family protein common family member:At2g33490 [Arabidopsis thaliana] 11 4 14 10 At3g27070 mitochondrial import receptor subunit TOM20-1 / translocase of outer membrane 20 kDa subunit 1 (TOM20-1) identical to mitochondrial import receptor subunit TOM20-1 SP:P82872 from [Arabidopsis thaliana] 11 4 14 11 At3g27130 hypothetical protein 11 4 14 12 At3g30230 "myosin heavy chain-related similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)(SP:Q99323) {Drosophila melanogaster}" 11 4 14 13 At3g30300 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 11 4 14 14 At3g30510 hypothetical protein 11 4 14 15 At3g30580 expressed protein ; expression supported by MPSS 11 4 14 16 At3g30760 hypothetical protein 11 4 14 17 At3g30840 hypothetical protein 11 4 14 18 At3g31900 hypothetical protein 11 4 14 19 At3g31955 hypothetical protein 11 4 14 20 At3g44770 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 11 4 14 21 At3g44810 F-box family protein contains F-box domain Pfam:PF00646 11 4 14 22 At3g44980 hypothetical protein 11 4 14 23 At3g45040 phosphatidate cytidylyltransferase family protein weak similarity to SP|P20048 Dolichol kinase (EC 2.7.1.108) {Saccharomyces cerevisiae}; contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 11 4 14 24 At3g45190 SIT4 phosphatase-associated family protein contains Pfam profile: PF04499 SIT4 phosphatase-associated protein 11 4 14 25 At3g45260 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 4 15 1 At3g45450 Clp amino terminal domain-containing protein contains Pfam profile: PF02861 Clp amino terminal domain 11 4 15 2 At3g45510 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 11 4 15 3 At3g48330 protein-L-isoaspartate O-methyltransferase / PIMT (PCM) identical to SP|Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana} 11 4 15 4 At3g48390 MA3 domain-containing protein similar to programmed cell death 4 protein [Gallus gallus] GI:12958564; contains Pfam profile PF02847: MA3 domain 11 4 15 5 At3g48560 "acetolactate synthase, chloroplast / acetohydroxy-acid synthase (ALS) nearly identical to SP|P17597 Acetolactate synthase, chloroplast precursor (EC 2.2.1.6, formerly EC 4.1.3.18) (Acetohydroxy-acid synthase) (ALS) {Arabidopsis thaliana}" 11 4 15 6 At3g48620 chloroplast outer membrane protein-related weak similarity to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607 11 4 15 7 At3g48800 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 11 4 15 8 At3g48860 expressed protein 11 4 15 9 At3g49010 60S ribosomal protein L13 (RPL13B) / breast basic conserved protein 1-related (BBC1) 11 4 15 10 At3g49060 protein kinase family protein / U-box domain-containing protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 11 4 15 11 At3g51910 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 11 4 15 12 At3g51960 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 11 4 15 13 At3g52090 DNA-directed RNA polymerase II 13.6 kDa subunit (RPB13.6) identical to SP|Q38859 DNA-directed RNA polymerase II 13.6 kDa polypeptide (EC 2.7.7.6) {Arabidopsis thaliana} 11 4 15 14 At3g52130 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to cysteine-rich 5B protein - Lycopersicon esculentum, PIR2:S39552 [GI:415833]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 11 4 15 15 At3g52280 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 11 4 15 16 At3g52340 sucrose-phosphatase 2 (SPP2) identical to sucrose-phosphatase (SPP2) [Arabidopsis thaliana] GI:13811669; supporting cDNA gi|13811668|gb|AF356816.1|AF356816 11 4 15 17 At3g52510 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 11 4 15 18 At3g52560 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 11 4 15 19 At3g55070 expressed protein 11 4 15 20 At3g55130 "ABC transporter family protein breast cancer resistance protein 1 BCRP1, Mus musculus, EMBL:NP_036050" 11 4 15 21 At3g55310 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 11 4 15 22 At3g55370 Dof-type zinc finger domain-containing protein 11 4 15 23 At3g55540 nuclear transport factor 2 (NTF2) family protein contains similarity to Swiss-Prot:Q9P926 nuclear transport factor 2 (NTF-2) [Candida albicans] 11 4 15 24 At3g55600 "expressed protein predicted proteins, Arabidopsis thaliana" 11 4 15 25 At3g55750 "60S ribosomal protein L35a (RPL35aD) ribosomal protein L35a.e.c15, Saccharomyces cerevisiae, PIR:S44069" 11 4 16 1 At3g55810 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 11 4 16 2 At3g58680 "ethylene-responsive transcriptional coactivator, putative similar to ethylene-responsive transcriptional coactivator [Lycopersicon esculentum] gi|5669634|gb|AAD46402" 11 4 16 3 At3g58730 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) identical to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit) (Swiss-Prot:Q9XGM1) [Arabidopsis thaliana] 11 4 16 4 At3g58910 F-box family protein contains F-box domain Pfam:PF00646 11 4 16 5 At3g58970 magnesium transporter CorA-like family protein contains Pfam profile PF01544: CorA-like Mg2+ transporter protein 11 4 16 6 At3g59120 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 4 16 7 At3g59180 hypothetical protein contains a novel domain with similarity to F-box domain; 11 4 16 8 At3g59340 expressed protein identical to anthocyanin-related membrane protein 3 (GI:16416387) [Arabidopsis thaliana] 11 4 16 9 At3g59380 "farnesyltransferase alpha subunit, putative / FTA, putative / protein farnesyltransferase, putative similar to farnesyltransferase alpha subunit [GI:2246442][Pisum sativum]" 11 4 16 10 At3g62050 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 11 4 16 11 At3g62110 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 11 4 16 12 At3g62290 "ADP-ribosylation factor identical to GP:166586 ADP-ribosylation factor {Arabidopsis thaliana}; ADP-ribosylation factor 1 - Arabidopsis thaliana, PIR:S28875" 11 4 16 13 At3g62350 hypothetical protein 11 4 16 14 At3g62510 protein disulfide isomerase-related contains weak similarity tot Swiss-Prot:P80284 protein disulfide isomerase precursor (PDI) (Endosperm protein E-1) [Hordeum vulgare] 11 4 16 15 At3g62580 expressed protein 11 4 16 16 At3g62740 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 11 4 16 17 At3g62780 C2 domain-containing protein contains similarity to shock protein SRC2 [Glycine max] gi|2055230|dbj|BAA19769 ; contains Pfam profile PF00168:C2 domain 11 4 16 18 At4g01650 expressed protein 11 4 16 19 At4g01700 "chitinase, putative similar to peanut type II chitinase GI:1237025 from [Arachis hypogaea]" 11 4 16 20 At4g01870 tolB protein-related contains weak similarity to TolB protein precursor (Swiss-Prot:P44677) [Haemophilus influenzae] 11 4 16 21 At4g01910 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 11 4 16 22 At4g02030 expressed protein 11 4 16 23 At4g02080 GTP-binding protein (SAR1A) identical to SP:O04834 GTP-binding protein SAR1A. [Arabidopsis thaliana] 11 4 16 24 At4g02220 "zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein similar to SP|Q16342 Programmed cell death protein 2 (Zinc finger protein Rp-8) {Homo sapiens}; contains Pfam profiles PF01753: MYND finger, PF04194: Programmed cell death protein 2, C-terminal putative domain" 11 4 16 25 At4g02280 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative strong similarity to sucrose synthase GI:6682841 from [Citrus unshiu]" 11 4 17 1 At4g05220 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related weak similarity to hin1 [Nicotiana tabacum] GI:1619321 11 4 17 2 At4g05280 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At1g25886, At4g03300" 11 4 17 3 At4g05450 "adrenodoxin-like ferredoxin 2 similar to SP|P46656 Adrenodoxin, mitochondrial precursor (Adrenal ferredoxin) from Mus musculus, SP|P10109 Adrenodoxin, mitochondrial precursor (Hepatoredoxin) from Homo sapiens, SP|P29330 Adrenodoxin from Ovis aries; contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domains; identical to cDNA GI: 28192430" 11 4 17 4 At4g05523 hypothetical protein 11 4 17 5 At4g06490 hypothetical protein 11 4 17 6 At4g06634 "zinc finger (C2H2 type) family protein contains Pfam PF00096: Zinc finger, C2H2 type" 11 4 17 7 At4g07435 cytochrome P-450 aromatase-related similar to minor outer capsid protein VP4 (GI:13446784) [Human rotavirus C]; similar to cytochrome P-450 aromatase (GI:21170) [Gallus gallus]; 11 4 17 8 At4g07480 hypothetical protein 11 4 17 9 At4g10630 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 11 4 17 10 At4g10695 hypothetical protein 11 4 17 11 At4g10850 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 11 4 17 12 At4g10910 expressed protein 11 4 17 13 At4g11050 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-beta-1,4-glucanase GI:4972236 from [Fragaria x ananassa]" 11 4 17 14 At4g11090 expressed protein other hypothetical proteins - Arabidopsis thaliana 11 4 17 15 At4g11250 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL52 11 4 17 16 At4g11310 "cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 11 4 17 17 At4g14040 "selenium-binding protein, putative contains Pfam profile PF05694: 56kDa selenium binding protein (SBP56); similar to Putative selenium-binding protein (Swiss-Prot:O23264) [Arabidopsis thaliana]; similar to selenium binding protein (GI:15485232) [Arabidopsis thaliana]" 11 4 17 18 At4g14090 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;similar to UDP-glucose:anthocyanin 5-O-glucosyltransferase GI:4115563 from [Verbena x hybrida] 11 4 17 19 At4g14210 "phytoene dehydrogenase, chloroplast / phytoene desaturase (PDS) identical to SP|Q07356 Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase){Arabidopsis thaliana}; high similarity to phytoene desaturase [Lycopersicon esculentum][GI:19287]" 11 4 17 20 At4g14250 UBX domain-containing protein low similarity to 60S ribosomal protein L2 [Nicotiana tabacum] GI:9230281; contains Pfam profile PF00789: UBX domain 11 4 17 21 At4g14385 expressed protein 11 4 17 22 At4g14400 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 11 4 17 23 At4g14560 auxin-responsive protein / indoleacetic acid-induced protein 1 (IAA1) identical to SP|P49677 Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) {Arabidopsis thaliana} 11 4 17 24 At4g14615 expressed protein 11 4 17 25 At4g16980 "arabinogalactan-protein family similar to arabinogalactan protein [Arabidopsis thaliana] gi|10880495|gb|AAG24277; contains proline-rich extensin domains, INTERPRO:IPR002965" 11 4 18 1 At4g17020 "transcription factor-related contains weak similarity to Swiss-Prot:Q92759 TFIIH basal transcription factor complex p52 subunit (Basic transcription factor 52 kDa subunit, BTF2-p52, General transcription factor IIH polypeptide 4) [Homo sapiens]" 11 4 18 2 At4g17190 farnesyl pyrophosphate synthetase 2 (FPS2) / FPP synthetase 2 / farnesyl diphosphate synthase 2 identical to SP|Q43315 Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis thaliana} 11 4 18 3 At4g17230 scarecrow-like transcription factor 13 (SCL13) 11 4 18 4 At4g17430 expressed protein weak similarity to CigA protein [Mucor circinelloides] GI:9717020 11 4 18 5 At4g17486 expressed protein 11 4 18 6 At4g17615 calcineurin B-like protein 1 (CBL1) identical to calcineurin B-like protein 1 (GI:3309082) [Arabidopsis thaliana] 11 4 18 7 At4g17670 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 11 4 18 8 At4g20270 "leucine-rich repeat transmembrane protein kinase, putative CLAVATA1 receptor kinase, Arabidopsis th., PATX:G2160756" 11 4 18 9 At4g20320 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 11 4 18 10 At4g20470 hypothetical protein 11 4 18 11 At4g20650 "receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function; receptor-like protein kinase homolog RK20-1, Phaseolus vulgaris, gb:AF078082; does not contain a stop codon. contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069" 11 4 18 12 At4g20830 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 11 4 18 13 At4g20890 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} 11 4 18 14 At4g21080 "Dof-type zinc finger domain-containing protein prolamin box binding factor, Zea mays, PATCHX:G2393775" 11 4 18 15 At4g21120 amino acid permease family protein similar to cationic amino acid transporter-1 [Rattus norvegicus] GI:1589917; contains Pfam profile PF00324: Amino acid permease 11 4 18 16 At4g23700 "cation/hydrogen exchanger, putative (CHX17) similar to Na+/H+-exchanging protein slr1595 - Synechocystis sp., EMBL:D90902; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 11 4 18 17 At4g23750 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6 - Lycopersicon esculentum,PID:g2213785" 11 4 18 18 At4g23910 "expressed protein various predicted proteins, Arabidopsis thaliana" 11 4 18 19 At4g23950 expressed protein ; expression supported by MPSS 11 4 18 20 At4g24120 "transporter, putative similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein" 11 4 18 21 At4g24170 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 11 4 18 22 At4g24290 expressed protein 11 4 18 23 At4g24340 phosphorylase family protein contains Pfam PF01048: Phosphorylase family 11 4 18 24 At4g26930 myb family transcription factor (MYB97) contains Pfam profile: PF00249 myb-like DNA-binding domain ;similar to anther-specific myb-related protein 2 GI:11066263 from [Nicotiana tabacum] 11 4 18 25 At4g26965 NADH:ubiquinone oxidoreductase family protein contains Pfam profile PF05071: NADH:ubiquinone oxidoreductase 17.2 kD subunit 11 4 19 1 At4g27120 expressed protein 11 4 19 2 At4g27180 kinesin-like protein B (KATB) 11 4 19 3 At4g27380 expressed protein 11 4 19 4 At4g27430 COP1-interacting protein 7 (CIP7) identical to COP1-Interacting Protein 7 (CIP7) GI:3327868 from [Arabidopsis thaliana] 11 4 19 5 At4g27590 copper-binding protein-related low similarity to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 11 4 19 6 At4g27620 expressed protein 11 4 19 7 At4g30210 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-cytochrome P450 oxydoreductase from [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183564, GI:13183566" 11 4 19 8 At4g30260 "integral membrane Yip1 family protein contains Pfam domain, PF04893: Yip1 domain" 11 4 19 9 At4g30420 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 11 4 19 10 At4g30480 tetratricopeptide repeat (TPR)-containing protein similar to SP|Q99614 Tetratricopeptide repeat protein 1 {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 11 4 19 11 At4g30620 "expressed protein contains Pfam domain PF02575: Uncharacterized BCR, YbaB family COG0718; contains similarity to complex interacting protein 9 (CIP9) GI: 32892212" 11 4 19 12 At4g30680 MA3 domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profile PF02847: MA3 domain 11 4 19 13 At4g30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related contains similarity to CDK-activating kinase assembly factor MAT1 (RING finger protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (Swiss-Prot:P51950) [Marthasterias glacialis] 11 4 19 14 At4g30860 SET domain-containing protein low similarity to IL-5 promoter REII-region-binding protein [Homo sapiens] GI:12642795; contains Pfam profile PF00856: SET domain 11 4 19 15 At4g33380 expressed protein 11 4 19 16 At4g33440 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 11 4 19 17 At4g33590 hypothetical protein 11 4 19 18 At4g33630 expressed protein 11 4 19 19 At4g33800 expressed protein 11 4 19 20 At4g33860 "glycosyl hydrolase family 10 protein xylan endohydrolase isoenzyme X-I, Hordeum vulgare,PID:g1813595; contains Pfam profile PF00331: Glycosyl hydrolase family 10" 11 4 19 21 At4g33985 expressed protein 11 4 19 22 At4g34040 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 11 4 19 23 AT5G57480 PC-1 D02 11 4 19 24 3XSSC PC-1 D14 11 4 19 25 AT1G29930 PC-1 H02 11 4 20 1 3XSSC PC-1 H14 11 4 20 2 AT3G44150 PC-1 L02 11 4 20 3 3XSSC PC-1 L14 11 4 20 4 AT4G00810 PC-1 P02 11 4 20 5 3XSSC PC-1 P14 11 4 20 6 At4g36590 MADS-box protein (AGL40) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 11 4 20 7 At4g36630 expressed protein 11 4 20 8 At4g36770 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 11 4 20 9 At4g36830 GNS1/SUR4 membrane family protein weak similarity to long chain polyunsaturated fatty acid elongation enzyme [Isochrysis galbana] GI:17226123; contains Pfam profile PF01151: GNS1/SUR4 family 11 4 20 10 At4g37000 accelerated cell death 2 (ACD2) identical to accelerated cell death 2 (ACD2) GI:12484129 from [Arabidopsis thaliana] 11 4 20 11 At4g37060 "patatin, putative similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734" 11 4 20 12 At4g37230 "oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putative similar to Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) (SP:P14226) {Pisum sativum}" 11 4 20 13 At4g37280 MRG family protein contains Pfam domain PF05712: MRG 11 4 20 14 At4g39870 "expressed protein hypothetical protein, Schizosaccharomyces cerevisae, Z99168" 11 4 20 15 At4g39930 expressed protein 11 4 20 16 At4g40070 expressed protein 11 4 20 17 At5g01010 expressed protein 11 4 20 18 At5g01170 "glycine-rich protein predicted proteins, Arabidopsis thaliana" 11 4 20 19 At5g01225 hypothetical protein 11 4 20 20 At5g01360 expressed protein several hypothetical proteins - Arabidopsis thaliana 11 4 20 21 At5g01420 glutaredoxin family protein 11 4 20 22 At5g04130 "DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative similar to SP|O50627 DNA gyrase subunit B (EC 5.99.1.3) {Bacillus halodurans}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00204: DNA topoisomerase II (N-terminal region), PF00986: DNA gyrase, B subunit, carboxyl terminus, PF01751: Toprim domain" 11 4 20 23 At5g04180 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 11 4 20 24 At5g04360 "pullulanase, putative / starch debranching enzyme, putative similar to pullulanase [Spinacia oleracea] GI:634093 (EC 3.2.1.41); contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain" 11 4 20 25 At5g04420 "kelch repeat-containing protein low similarity to rngB protein, Dictyostelium discoideum, PIR:S68824; contains Pfam profile PF01344: Kelch motif" 11 4 21 1 At5g04610 spermidine synthase-related / putrescine aminopropyltransferase-related contains weak similarity to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2) (Swiss-Prot:O48659) [Hyoscyamus niger] 11 4 21 2 At5g04660 "cytochrome P450, putative cytochrome P450 77A3p, Glycine max., PIR:T05948" 11 4 21 3 At5g04820 ovate family protein 62% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 11 4 21 4 At5g04860 expressed protein 11 4 21 5 At5g07410 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 11 4 21 6 At5g07470 peptide methionine sulfoxide reductase (MSR) nearly identical to peptide methionine sulfoxide reductase (msr) [Arabidopsis thaliana] GI:4884033 11 4 21 7 At5g07640 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518 and a IBR domain, Pfam:PF01485" 11 4 21 8 At5g07690 myb family transcription factor (MYB29) similar to myb transcription factor GI:3941436 from [Arabidopsis thaliana] 11 4 21 9 At5g07890 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha) (Alpha isomyosin) (Fragment) (Swiss-Prot:P04460) [Oryctolagus cuniculus]" 11 4 21 10 At5g07950 "expressed protein ferredoxin (2Fe-2S), Arabidopsis thaliana, PIR:B71412" 11 4 21 11 At5g08120 myosin heavy chain-related identical to myosin heavy chain-like protein GI:1732515 from [Arabidopsis thaliana] 11 4 21 12 At5g08160 "serine/threonine protein kinase, putative identical to serine/threonine protein kinase [Arabidopsis thaliana] gi|2109293|gb|AAB69123" 11 4 21 13 At5g11190 "AP2 domain-containing transcription factor, putative [Arabidopsis thaliana]" 11 4 21 14 At5g11250 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 11 4 21 15 At5g11420 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 11 4 21 16 At5g11480 expressed protein 11 4 21 17 At5g11640 "expressed protein predicted proteins, Drosophila melanogaster and Homo sapiens" 11 4 21 18 At5g11700 "glycine-rich protein predicted protein, Arabidopsis thaliana" 11 4 21 19 At5g11880 "diaminopimelate decarboxylase, putative / DAP carboxylase, putative similar to diaminopimelate decarboxylase [Arabidopsis thaliana] GI:6562332; contains Pfam profiles PF02784: Pyridoxal-dependent decarboxylase pyridoxal binding domain, PF00278: Pyridoxal-dependent decarboxylase C-terminal sheet domain" 11 4 21 20 At5g11940 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 11 4 21 21 At5g15080 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] Swiss-Prot:Q06548" 11 4 21 22 At5g15140 aldose 1-epimerase family protein similar to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3) (Mutarotase) from Acinetobacter calcoaceticus; contains Pfam profile PF01263 Aldose 1-epimerase 11 4 21 23 At5g15290 "integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) contains plant integral membrane protein domain, TIGR01569" 11 4 21 24 At5g15350 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 11 4 21 25 At5g15520 "40S ribosomal protein S19 (RPS19B) 40S RIBOSOMAL PROTEIN S19 - Oryza sativa, SWISSPROT:RS19_ORYSA" 11 4 22 1 At5g15560 hypothetical protein 11 4 22 2 At5g15725 expressed protein 11 4 22 3 At5g15780 pollen Ole e 1 allergen and extensin family protein contains Pfam profile PF01190: Pollen proteins Ole e I family 11 4 22 4 At5g18410 expressed protein similar to p53 inducible protein [Homo sapiens] GI:5616320 11 4 22 5 At5g18460 "expressed protein predicted proteins, Arabidopsis thaliana Pfam profile PF03080: Arabidopsis proteins of unknown function" 11 4 22 6 At5g18620 "DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain" 11 4 22 7 At5g18636 hypothetical protein 11 4 22 8 At5g18800 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein contains Pfam profile: PF05850 NADH-ubiquinone oxidoreductase 19 kDa subunit 11 4 22 9 At5g18840 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family protein 1 [Arabidopsis thaliana] GI:14585699; contains Pfam profile PF00083: major facilitator superfamily protein" 11 4 22 10 At5g19000 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 11 4 22 11 At5g19030 "RNA recognition motif (RRM)-containing protein low similarity to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis} SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 11 4 22 12 At5g22380 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 11 4 22 13 At5g22440 60S ribosomal protein L10A (RPL10aC) 11 4 22 14 At5g22590 hypothetical protein 11 4 22 15 At5g22650 "expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4;" 11 4 22 16 At5g22800 "aminoacyl-tRNA synthetase family protein contains Pfam profiles: PF01411 tRNA synthetases class II (A), PF02272 DHHA1 domain" 11 4 22 17 At5g22860 serine carboxypeptidase S28 family protein contains Pfam profile: PF05577 serine carboxypeptidase S28 11 4 22 18 At5g23020 2-isopropylmalate synthase 2 (IMS2) identical to 2-isopropylmalate synthase (IMS2) [Arabidopsis thaliana] GI:12330689 11 4 22 19 At5g23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam domain PF01805: Surp module 11 4 22 20 At5g25752 rhomboid family protein contains Pfam profile PF01694: Rhomboid family 11 4 22 21 At5g25780 "eukaryotic translation initiation factor 3 subunit 9, putative / eIF-3 eta, putative / eIF3b, putative nearly identical to SP|Q9C5Z1 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) {Arabidopsis thaliana}" 11 4 22 22 At5g25960 "hypothetical protein various predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 11 4 22 23 At5g26010 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase-2C, Mesembryanthemum crystallinum, AF075579" 11 4 22 24 At5g26170 "WRKY family transcription factor DNA-binding protein, WRKY1 Avena sativa, EMBL:AF140554" 11 4 22 25 At5g26210 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 11 4 23 1 At5g26642 reverse transcriptase-related low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278 11 4 23 2 At5g26742 "DEAD box RNA helicase (RH3) nearly identical to RNA helicase [Arabidopsis thaliana] GI:3775987; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF00098: Zinc knuckle" 11 4 23 3 At5g33200 hypothetical protein predicted replication A1 proteins - Arabidopsis thaliana 11 4 23 4 At5g33290 exostosin family protein contains Pfam profile: PF03016 Exostosin family 11 4 23 5 At5g34450 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 11 4 23 6 At5g34820 hypothetical protein predicted proteins - Arabidopsis thaliana 11 4 23 7 At5g34950 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 11 4 23 8 At5g35030 expressed protein 11 4 23 9 At5g35250 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 11 4 23 10 At5g35320 expressed protein 11 4 23 11 At5g38440 "self-incompatibility protein-related low similarity to self-incompatibility [Papaver nudicaule] GI:3097262, S3 self-incompatibility protein [Papaver rhoeas] GI:1107841" 11 4 23 12 At5g38500 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 11 4 23 13 At5g38660 expressed protein similar to unknown protein (pir||S75762) 11 4 23 14 At5g38720 "expressed protein predicted protein, Drosophila melanogaster" 11 4 23 15 At5g38900 DSBA oxidoreductase family protein contains Pfam profile: PF01323 DSBA-like thioredoxin domain 11 4 23 16 At5g38960 "germin-like protein, putative similar to germin-like protein subfamily 1 member 8 [SP|Q9LEA7]; contains PS00725 germin family signature" 11 4 23 17 At5g39140 hypothetical protein 11 4 23 18 At5g39200 hypothetical protein predicted proteins - Arabidopsis thaliana 11 4 23 19 At5g42030 expressed protein similar to unknown protein (emb|CAB66408.1) 11 4 23 20 At5g42080 "GTP-binding protein / phragmoplastin, putative strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family" 11 4 23 21 At5g42235 Expressed protein 11 4 23 22 At5g42290 transcription activator-related contains weak similarity to beta-cell E-box transcription activator 1 gi|529197|gb|AAA65702 11 4 23 23 At5g42460 "F-box family protein contains Pfam domain, PF00646: F-box domain" 11 4 23 24 At5g42520 expressed protein 11 4 23 25 At5g42690 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547; expression supported by MPSS" 11 4 24 1 At5g42760 O-methyltransferase N-terminus domain-containing protein contains Pfam profile PF02409: O-methyltransferase N-terminus 11 4 24 2 At5g45290 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 11 4 24 3 At5g45340 cytochrome P450 family protein similar to SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 11 4 24 4 At5g45490 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 11 4 24 5 At5g45550 mob1/phocein family protein contains Pfam profile: PF03637 Mob1/phocein family 11 4 24 6 At5g45690 expressed protein 11 4 24 7 At5g45750 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303744 from [Pisum sativum]" 11 4 24 8 At5g45890 "senescence-specific SAG12 protein (SAG12) / cysteine proteinase, putative identical to senescence-specific protein SAG12 GI:1046373 from [Arabidopsis thaliana]" 11 4 24 9 At5g45950 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386) and EXL1 (GI:15054382) [Arabidopsis thaliana], anther-specific proline-rich protein APG [Arabidopsis thaliana] GI:22599; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 11 4 24 10 At5g48530 expressed protein 11 4 24 11 At5g48575 hypothetical protein 11 4 24 12 At5g48700 ubiquitin-related contains similarity to SP|O13351 Ubiquitin-like protein smt3/pmt3 {Schizosaccharomyces pombe} 11 4 24 13 At5g48760 60S ribosomal protein L13A (RPL13aD) 11 4 24 14 At5g48940 "leucine-rich repeat transmembrane protein kinase, putative " 11 4 24 15 At5g48980 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 11 4 24 16 At5g49150 hypothetical protein 11 4 24 17 At5g49210 expressed protein 11 4 24 18 At5g51910 "TCP family transcription factor, putative similar to PCF2 [(GI:2580440) Oryza sativa]" 11 4 24 19 At5g51970 "sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative similar to NAD-dependent sorbitol dehydrogenase from Malus x domestica [gi:4519539]" 11 4 24 20 At5g52130 hypothetical protein 11 4 24 21 At5g52190 sugar isomerase (SIS) domain-containing protein similar to 6-phospho-3-hexuloisomerase [Mycobacterium gastri] GI:6899860; contains Pfam profile PF01380: SIS domain 11 4 24 22 At5g52360 "actin-depolymerizing factor, putative strong similarity to pollen specific actin-depolymerizing factor 2 [Nicotiana tabacum] GI:22857914; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein" 11 4 24 23 At5g52420 expressed protein 11 4 24 24 At5g52580 hypothetical protein 11 4 24 25 At5g52640 "heat shock protein 81-1 (HSP81-1) / heat shock protein 83 (HSP83) nearly identical to SP|P27323 Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) {Arabidopsis thaliana}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 11 4 25 1 At5g55300 DNA topoisomerase I identical to Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis thaliana] 11 4 25 2 At5g55360 "long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein contains similarity to wax synthase similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 11 4 25 3 At5g55530 C2 domain-containing protein low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 11 4 25 4 At5g55580 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 11 4 25 5 At5g55730 fasciclin-like arabinogalactan-protein (FLA1) identical to gi|13377776||AAK20857|13377775|gb|AF333970 11 4 25 6 At5g55790 expressed protein ; expression supported by MPSS 11 4 25 7 At5g55960 expressed protein 11 4 25 8 At5g56010 "heat shock protein, putative strong similarity to SP|P55737 Heat shock protein 81-2 (HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 11 4 25 9 At5g58600 "expressed protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 11 4 25 10 At5g58650 expressed protein 11 4 25 11 At5g58800 "quinone reductase family protein similar to 1,4-benzoquinone reductase [Phanerochaete chrysosporium][GI:4454993]; similar to Trp repressor binding protein [Escherichia coli][SP|P30849]; contains flavodoxin domain PF00258" 11 4 25 12 At5g58870 "FtsH protease, putative contains similarity to cell division protein FtsH homolog 3 SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis sp.}" 11 4 25 13 At5g59030 copper transporter 1 (COPT1) nearly identical to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana} 11 4 25 14 At5g59070 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 11 4 25 15 At5g59220 "protein phosphatase 2C, putative / PP2C, putative ABA induced protein phosphatase 2C, Fagus sylvatica, EMBL:FSY277743" 11 4 25 16 At5g59280 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 11 4 25 17 At5g61900 copine BONZAI1 (BON1) nearly identical to BONZAI1 [Arabidopsis thaliana] GI:15487382; contains Pfam profile PF00168: C2 domain 11 4 25 18 At5g61960 "RNA recognition motif (RRM)-containing protein Mei2-like protein, Arabidopsis thaliana, EMBL:D86122" 11 4 25 19 At5g62130 Per1-like protein-related 11 4 25 20 At5g62170 "expressed protein various predicted proteins, Arabidopsis thaliana" 11 4 25 21 At5g62350 "invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) similar to SP|Q42534 Pectinesterase 2 precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2) {Arabidopsis thaliana}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor; FL5-2I22 mRNA for DC 1.2 homolog, partial cds GI:11127598" 11 4 25 22 At5g62410 "SMC2-like condensin, putative (SMC2) (TITAN3) very strong similarity to SMC2-like condensin (TITAN3) [Arabidopsis thaliana] GI:14279543; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain" 11 4 25 23 At5g62570 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 11 4 25 24 At5g62610 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 11 4 25 25 At5g65170 VQ motif-containing protein contains PF05678: VQ motif 11 4 26 1 At5g65210 bZIP family transcription factor (TGA1) identical to transcription factor (TGA1) GI:16550 from [Arabidopsis thaliana] 11 4 26 2 At5g65370 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 11 4 26 3 At5g65430 "14-3-3 protein GF14 kappa (GRF8) identical to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from [Arabidopsis thaliana]" 11 4 26 4 At5g65580 expressed protein 11 4 26 5 At5g65640 basic helix-loop-helix (bHLH) family protein 11 4 26 6 At5g65790 myb family transcription factor (MYB68) identical to putative transcription factor (MYB68) GI:3941493 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 myb-like DNA-binding domain 11 4 26 7 At5g65850 F-box family protein 11 4 26 8 ath-MIR157a miRNA gene Arabidopsis thaliana miR157a stem-loop 11 4 26 9 ath-MIR162a miRNA gene Arabidopsis thaliana miR162a stem-loop 11 4 26 10 ath-MIR398b miRNA gene Arabidopsis thaliana miR398b stem-loop 11 4 26 11 3xSSC 3xSSC 11 4 26 12 3xSSC 3xSSC 11 4 26 13 3xSSC 3xSSC 11 4 26 14 3xSSC 3xSSC 11 4 26 15 3xSSC 3xSSC 11 4 26 16 At3g44770 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 11 4 26 17 At3g44810 F-box family protein contains F-box domain Pfam:PF00646 11 4 26 18 At3g44980 hypothetical protein 11 4 26 19 At3g45040 phosphatidate cytidylyltransferase family protein weak similarity to SP|P20048 Dolichol kinase (EC 2.7.1.108) {Saccharomyces cerevisiae}; contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 11 4 26 20 At3g45190 SIT4 phosphatase-associated family protein contains Pfam profile: PF04499 SIT4 phosphatase-associated protein 11 4 26 21 At3g45260 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 11 4 26 22 At3g45450 Clp amino terminal domain-containing protein contains Pfam profile: PF02861 Clp amino terminal domain 11 4 26 23 At3g45510 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 11 4 26 24 Blank Blank 11 4 26 25 Blank Blank 12 1 1 1 3xSSC 3xSSC 12 1 1 2 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 1 1 3 atc12 Randomly generated negative control 12 1 1 4 Alien6 Control: Stratagene Spotreport Alien Oligo 12 1 1 5 atc02 Randomly generated negative control 12 1 1 6 atc08 Randomly generated negative control 12 1 1 7 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 12 1 1 8 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 12 1 1 9 3xSSC 3xSSC 12 1 1 10 At1g01060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA LATE ELONGATED HYPOCOTYL MYB transcription factor GI:3281845 12 1 1 11 At1g01190 "cytochrome P450, putative similar to cytochrome P450 SP:O48927 from [Glycine max]" 12 1 1 12 At1g01240 expressed protein 12 1 1 13 At1g01440 extra-large G-protein-related weak similarity to extra-large G-protein (AtXLG1) (GI:3201682) [Arabidopsis thaliana] 12 1 1 14 At1g01490 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 12 1 1 15 At1g01660 U-box domain-containing protein 12 1 1 16 At1g01720 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC domain protein NAM GB:AAD17313 GI:4325282 from [Arabidopsis thaliana] 12 1 1 17 3xSSC 3xSSC 12 1 1 18 At1g04360 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 1 19 At1g04540 C2 domain-containing protein low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 12 1 1 20 At1g04580 "aldehyde oxidase, putative similar to aldehyde oxidases from Arabidopsis thaliana: GI:3172023, GI:3172025, GI:3172044; identical to cDNA putative aldehyde oxidase (AO2) mRNA, partial cds GI:2792305" 12 1 1 21 At1g04730 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 12 1 1 22 At1g04800 glycine-rich protein 12 1 1 23 At1g04960 expressed protein 12 1 1 24 At1g04990 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 12 1 1 25 3xSSC 3xSSC 12 1 2 1 At1g07645 lactoylglutathione lyase family protein / glyoxalase I family protein Contains Pfam profile PF00903:glyoxalase family protein 12 1 2 2 At1g07770 "40S ribosomal protein S15A (RPS15aA) identical to GB:AAA61608 from [Arabidopsis thaliana] (Plant Physiol. 106 (1), 401-402 (1994))" 12 1 2 3 At1g07810 "calcium-transporting ATPase 1, endoplasmic reticulum-type (ECA1) identical to SP|P92939 Calcium-transporting ATPase 1, endoplasmic reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana); contains InterPro Accession IPR006069: Cation transporting ATPase" 12 1 2 4 At1g07940 "elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990))" 12 1 2 5 At1g07970 expressed protein 12 1 2 6 At1g08110 "lactoylglutathione lyase, putative / glyoxalase I, putative similar to lactoylglutathione lyase SP:O04885 from [Brassica juncea]" 12 1 2 7 At1g08135 "cation/hydrogen exchanger (CHX6b) Note: CHX6a and CHX6b were originally 1 gene but were split pased on alignments with other family members; may be a pseudogene and requires futher investigation; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 12 1 2 8 3xSSC 3xSSC 12 1 2 9 At1g10770 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 12 1 2 10 At1g10930 DNA helicase (RECQl4A) nearly identical to DNA Helicase [Arabidopsis thaliana] GI:11121449 12 1 2 11 At1g10990 expressed protein and genscan 12 1 2 12 At1g11170 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 12 1 2 13 At1g11220 expressed protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 12 1 2 14 At1g11370 pectinesterase family protein similar to pectin methylesterase GI:1279597 from [Nicotiana plumbaginifolia]; contains Pfam profile: PF01095 pectinesterase 12 1 2 15 At1g11410 "S-locus protein kinase, putative similar to receptor-like protein kinase [Arabidopsis thaliana] gi|4008008|gb|AAC95352; contains S-locus glycoprotein family domain, Pfam:PF00954" 12 1 2 16 3xSSC 3xSSC 12 1 2 17 At1g14240 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to nod factor binding lectin-nucleotide phosphohydrolase [Dolichos biflorus] GI:4868375; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 12 1 2 18 At1g14400 "ubiquitin-conjugating enzyme 1 (UBC1) E2; identical to gi:431259, SP:P25865" 12 1 2 19 At1g14440 zinc finger homeobox family protein / ZF-HD homeobox family protein 12 1 2 20 At1g14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) nearly identical to SP|P93736 Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS) {Arabidopsis thaliana} 12 1 2 21 At1g14670 "endomembrane protein 70, putative similar to endomembrane protein emp70 precursor isolog GB:AAF67014 GI:7677068 (Homo sapiens)" 12 1 2 22 At1g14790 "RNA-dependent RNA polymerase, putative similar to RNA-directed RNA polymerase GB:CAA09697 GI:4138282 [Nicotiana tabacum]" 12 1 2 23 At1g14820 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 [Saccharomyces cerevisiae (Baker's yeast)] 12 1 2 24 3xSSC 3xSSC 12 1 2 25 At1g17560 ribosomal protein L14 family protein similar to GB:Z98756 from (Mycobacterium leprae) 12 1 3 1 At1g17720 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 12 1 3 2 At1g17780 expressed protein 12 1 3 3 At1g17920 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to A20 (GI:1881536) [Arabidopsis thaliana]; similar to homeobox protein GI:1173622 from [Phalaenopsis sp. SM9108] 12 1 3 4 At1g17980 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 12 1 3 5 At1g18180 expressed protein 12 1 3 6 At1g18250 "thaumatin, putative identical to SP|P50699 Thaumatin-like protein precursor {Arabidopsis thaliana}; strong similarity to pathogenesis-related group 5 protein GI:2749943 from [Brassica rapa]" 12 1 3 7 3xSSC 3xSSC 12 1 3 8 At1g21160 "eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2" 12 1 3 9 At1g21350 expressed protein 12 1 3 10 At1g21395 expressed protein 12 1 3 11 At1g21590 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 12 1 3 12 At1g21650 "preprotein translocase secA family protein contains Pfam profiles: PF01043 SecA protein, amino terminal region, PF00400 WD domain, G-beta repeat, PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 3 13 At1g21790 expressed protein 12 1 3 14 At1g21870 "glucose-6-phosphate/phosphate translocator-related similar to glucose 6 phosphate/phosphate translocators from Pisum sativum] GI:2997591, [Mesembryanthemum crystallinum] GI:9295277, [Solanum tuberosum] GI:2997593; contains Pfam profile PF00892: Integral membrane protein" 12 1 3 15 3xSSC 3xSSC 12 1 3 16 At1g24490 60 kDa inner membrane family protein similar to chloroplast membrane protein (ALBINO3) (GI:3927828) [Arabidopsis thaliana] 12 1 3 17 At1g24735 "caffeoyl-CoA 3-O-methyltransferase, putative similar to SP|Q43237 [Vitis vinifera], GI:684942 [Medicago sativa subsp. sativa]" 12 1 3 18 At1g24909 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana)" 12 1 3 19 At1g25310 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 1 3 20 At1g25370 expressed protein 12 1 3 21 At1g25520 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 12 1 3 22 At1g25580 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to putative NAM protein (GP:21554371) (Arabidopsis thaliana) 12 1 3 23 3xSSC 3xSSC 12 1 3 24 At1g29010 expressed protein ; expression supported by MPSS 12 1 3 25 At1g29180 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 1 4 1 At1g29250 expressed protein contains TIGRFAM TIGR00285: conserved hypothetical protein TIGR00285 12 1 4 2 At1g29400 RNA recognition motif (RRM)-containing protein similar to GI:6650523 from [Arabidopsis thaliana] 12 1 4 3 At1g29450 "auxin-responsive protein, putative similar to auxin-induced protein 6B (SP:P33083) [Glycine max]" 12 1 4 4 At1g29630 "exonuclease, putative similar to Swiss-Prot:P53695 exonuclease I (EXO I) [Schizosaccharomyces pombe]" 12 1 4 5 At1g29700 expressed protein 12 1 4 6 3xSSC 3xSSC 12 1 4 7 At1g32600 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; identical to hypothetical protein GB:AAF25964 GI:6714268 from [Arabidopsis thaliana] 12 1 4 8 At1g32770 no apical meristem (NAM) family protein similar to OsNAC7 protein GB:BAA89801 GI:6730944 from [Oryza sativa] 12 1 4 9 At1g32840 "Ulp1 protease family protein similar to At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 12 1 4 10 At1g33020 F-box family protein 12 1 4 11 At1g33060 no apical meristem (NAM) family protein similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago truncatula) 12 1 4 12 At1g33270 patatin-related contains Patatin domain PF01734 12 1 4 13 At1g33330 "peptide chain release factor, putative similar to peptide chain release factor 2 [Campylobacter jejuni] GI:6469929; contains Pfam profile PF00472: Peptidyl-tRNA hydrolase domain" 12 1 4 14 3xSSC 3xSSC 12 1 4 15 At1g42560 "seven transmembrane MLO family protein / MLO-like protein 9 (MLO9) nearly identical to membrane protein Mlo9 [Arabidopsis thaliana] GI:14091588; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 12 1 4 16 At1g43130 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502)" 12 1 4 17 At1g43245 expressed protein 12 1 4 18 At1g43666 lipid transfer protein-related 12 1 4 19 At1g43710 serine decarboxylase identical to serine decarboxylase [Arabidopsis thaliana] GI:15011302; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain 12 1 4 20 At1g43920 hypothetical protein 12 1 4 21 At1g44000 expressed protein 12 1 4 22 3xSSC 3xSSC 12 1 4 23 At1g49160 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 1 4 24 At1g49340 "phosphatidylinositol 3- and 4-kinase family protein contains similarity to phosphatidylinositol 4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos taurus] GI:2198791; contains Pfam profiles PF00454: Phosphatidylinositol 3- and 4-kinase, PF00613: Phosphoinositide 3-kinase family, accessory domain" 12 1 4 25 At1g49405 "integral membrane protein, putative contains 4 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588)" 12 1 5 1 At1g49600 "RNA-binding protein 47 (RBP47), putative similar to DNA binding protein ACBF GB:U90212 GI:1899187 from [Nicotiana tabacum]" 12 1 5 2 At1g49640 hypothetical protein similar to PrMC3 [Pinus radiata] GI:5487873 12 1 5 3 At1g49830 ethylene-responsive protein -related similarity to ER33 protein [Lycopersicon esculentum] GI:5669656 12 1 5 4 At1g49890 "expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566)" 12 1 5 5 3xSSC 3xSSC 12 1 5 6 At1g52800 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 12 1 5 7 At1g52940 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 12 1 5 8 At1g53000 cytidylyltransferase family contains Pfam profile: PF02348 cytidylyltransferase 12 1 5 9 At1g53160 squamosa promoter-binding protein-like 4 (SPL4) nearly identical to squamosa promoter binding protein-like 4 [Arabidopsis thaliana] GI:5931657; contains Pfam profile PF03110: SBP domain 12 1 5 10 At1g53210 "sodium/calcium exchanger family protein / calcium-binding EF hand family protein contains Pfam profiles: PF01699 sodium/calcium exchanger protein, PF00036 EF hand" 12 1 5 11 At1g53360 F-box family protein-related similar to hypothetical protein GI:4589954 from [Arabidopsis thaliana]; contains TIGRFAM TIGR01640: F-box protein interaction domain 12 1 5 12 At1g53430 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 12 1 5 13 3xSSC 3xSSC 12 1 5 14 At1g56080 expressed protein 12 1 5 15 At1g56230 expressed protein 12 1 5 16 At1g56280 "drought-responsive family protein contains an AT-AC intron 3, potentially contains a frameshift. An alternate model provides a translation more consistent with homologous proteins but lacks the AT-AC intron; similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 12 1 5 17 At1g56450 20S proteasome beta subunit G1 (PBG1) (PRCH) identical to 20S proteasome beta subunit (PBG1) GI:3421123 [Arabidopsis thaliana]; identical to cDNA proteasome subunit prch GI:2511597 12 1 5 18 At1g56540 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 12 1 5 19 At1g56720 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 1 5 20 At1g57565 hypothetical protein 12 1 5 21 3xSSC 3xSSC 12 1 5 22 At1g61490 "S-locus protein kinase, putative similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 12 1 5 23 At1g61667 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 12 1 5 24 At1g61720 dihydroflavonol 4-reductase (dihydrokaempferol 4-reductase) family (BAN) similar to dihydroflavonol 4-reductase GI:1332411 from [Rosa hybrida] 12 1 5 25 At1g61900 expressed protein contains similarity to glutamic acid/alanine-rich protein GI:6707830 from [Trypanosoma congolense] 12 1 6 1 At1g61950 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase GI:3283996 from [Nicotiana tabacum]; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 12 1 6 2 At1g62130 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 12 1 6 3 At1g62210 expressed protein 12 1 6 4 3xSSC 3xSSC 12 1 6 5 At1g64970 expressed protein 12 1 6 6 At1g65120 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 12 1 6 7 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 12 1 6 8 At1g65300 MADS-box protein (AGL38) similar to MADS-box transcription factor GI:6580947 from [Picea abies]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 12 1 6 9 At1g65350 "polyubiquitin, putative similar to polyubiquitin GI:248337 from [Zea mays]" 12 1 6 10 At1g65520 "enoyl-CoA hydratase/isomerase family protein low similarity to enoyl-CoA hydratase [Escherichia coli] GI:2764828, carnitine racemase SP|P31551 [Escherichia coli]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 12 1 6 11 At1g65590 "glycosyl hydrolase family 20 protein contains Pfam PF00728: Glycosyl hydrolase family 20, catalytic domain; contains Pfam PF02838: Glycosyl hydrolase family 20, domain 2; similar to Beta-hexosaminidase beta chain precursor (EC 3.2.1.52) (N-acetyl-beta- glucosaminidase) (Beta-N-acetylhexosaminidase) (Hexosaminidase B) (Swiss-Prot:P07686) [Homo sapiens]" 12 1 6 12 3xSSC 3xSSC 12 1 6 13 At1g68400 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GB:AAA33715 from [Petunia integrifolia]" 12 1 6 14 At1g68560 alpha-xylosidase (XYL1) identical to alpha-xylosidase precursor GB:AAD05539 GI:4163997 from [Arabidopsis thaliana]; contains Pfam profile PF01055: Glycosyl hydrolases family 31; identical to cDNA alpha-xylosidase precursor (XYL1) partial cds GI:4163996 12 1 6 15 At1g68590 "plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative similar to SP|P82412 Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) {Spinacia oleracea}; contains Pfam profile PF04839: Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)" 12 1 6 16 At1g68765 expressed protein 12 1 6 17 At1g68820 "membrane protein, putative contains 7 transmembrane domains; similar to inhibitor of apoptosis-2 IAP-2 (GI:20043383) [Mamestra configurata nucleopolyhedrovirus]" 12 1 6 18 At1g68960 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 12 1 6 19 At1g69040 ACT domain containing protein (ACR4) low similarity to uridylyltransferase [Gluconacetobacter diazotrophicus] GI:17226253; contains Pfam profile PF01842: ACT domain 12 1 6 20 3xSSC 3xSSC 12 1 6 21 At1g71850 expressed protein ; expression supported by MPSS 12 1 6 22 At1g72000 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 12 1 6 23 At1g72050 "zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type" 12 1 6 24 At1g72200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 12 1 6 25 At1g72260 thionin (THI2.1) identical to thionin [Arabidopsis thaliana] gi|1181531|gb|AAC41678 12 1 7 1 At1g72450 expressed protein 12 1 7 2 At1g72510 expressed protein 12 1 7 3 AT5G57480 PC-1 A01 12 1 7 4 3XSSC PC-1 A13 12 1 7 5 AT1G29930 PC-1 E01 12 1 7 6 3XSSC PC-1 E13 12 1 7 7 AT3G44150 PC-1 I01 12 1 7 8 3XSSC PC-1 I13 12 1 7 9 AT4G00810 PC-1 M01 12 1 7 10 3XSSC PC-1 M13 12 1 7 11 3xSSC 3xSSC 12 1 7 12 At1g75340 zinc finger (CCCH-type) family protein weak similarity to Nucleoporin NUP42 (Nuclear pore protein NUP42) (Swiss-Prot:P49686) [Saccharomyces cerevisiae]; contains Pfam profile PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) 12 1 7 13 At1g75510 "transcription initiation factor IIF beta subunit (TFIIF-beta) family protein contains Pfam profile: PF02270 transcription initiation factor IIF, beta subunit" 12 1 7 14 At1g75580 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana]" 12 1 7 15 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 12 1 7 16 At1g75840 "Rac-like GTP-binding protein (ARAC5) / Rho-like GTP-binding protein (ROP4) identical to RAC-like GTP-binding protein (ARAC5) SP:Q38937 [Arabidopsis thaliana], Rho-like GTP binding protein [Arabidopsis thaliana] GI:2654009; identical to cDNA Rho-like GTP binding protein (Rop4) GI:2654008" 12 1 7 17 At1g76020 expressed protein 12 1 7 18 At1g76050 "pseudouridine synthase family protein contains Pfam profiles: PF00849 RNA pseudouridylate synthase, PF01479: S4 domain" 12 1 7 19 3xSSC 3xSSC 12 1 7 20 At1g78770 cell division cycle family protein similar to cell division cycle protein GI:603230 from [Homo sapiens]; contains Pfam profile PF00515 TPR Domain 148977 (apparently not full-length). 12 1 7 21 At1g78890 expressed protein 12 1 7 22 At1g78930 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 12 1 7 23 At1g79090 expressed protein 11408 (cDNA not full-length) 12 1 7 24 At1g79140 expressed protein 12 1 7 25 At1g79350 "DNA-binding protein, putative contains Pfam PF00628: PHD-finger domain; contains TIGRFAMS TIGR01053: zinc finger domain, LSD1 subclass; contains Pfam PF00271: Helicase conserved C-terminal domain; similar to WSSV086 (GI:19481678)[shrimp white spot syndrome virus]; similar to nuclear protein Np95 (GI:17939938) [Mus musculus]" 12 1 8 1 At1g79410 transporter-related low similarity to organic anion transporter 3 [Rattus norvegicus] GI:5545293; contains Pfam profile PF00083: major facilitator superfamily protein 12 1 8 2 3xSSC 3xSSC 12 1 8 3 At2g02010 "glutamate decarboxylase, putative strong similarity to glutamate decarboxylase isozyme 3 [Nicotiana tabacum] GI:13752462" 12 1 8 4 At2g02230 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 12 1 8 5 At2g02310 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 12 1 8 6 At2g02500 expressed protein contains Pfam profile: PF01128 uncharacterized protein family UPF0007; identical to GP:12697583 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase {Arabidopsis thaliana}; identical to cDNA 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase (ISPD) GI:7385140 12 1 8 7 At2g02560 "TIP120 protein, putative similar to TBP-interacting protein TIP120 GI:1799570 from [Rattus norvegicus]" 12 1 8 8 At2g02730 expressed protein 12 1 8 9 At2g02790 calmodulin-binding family protein very low similarity to SP|P12036 Neurofilament triplet H protein {Homo sapiens}; contains Pfam profile PF00612: IQ calmodulin-binding motif 12 1 8 10 3xSSC 3xSSC 12 1 8 11 At2g06120 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 12 1 8 12 At2g06645 expressed protein 12 1 8 13 At2g06845 expressed protein 12 1 8 14 At2g07140 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 12 1 8 15 At2g07260 hypothetical protein 12 1 8 16 At2g07773 hypothetical protein 12 1 8 17 At2g07672 hypothetical protein 12 1 8 18 3xSSC 3xSSC 12 1 8 19 At2g15230 "lipase family protein similar to SP|P07098 Triacylglycerol lipase, gastric precursor (EC 3.1.1.3) {Homo sapiens}; contains Pfam profile PF04083: ab-hydrolase associated lipase region" 12 1 8 20 At2g15390 "xyloglucan fucosyltransferase, putative (FUT4) identical to SP|Q9SJP2 Probable fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 12 1 8 21 At2g15440 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 12 1 8 22 At2g15600 hypothetical protein 12 1 8 23 At2g15670 hypothetical protein 12 1 8 24 At2g15890 expressed protein 12 1 8 25 At2g15980 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 9 1 3xSSC 3xSSC 12 1 9 2 At2g18880 fibronectin type III domain-containing protein contains Pfam profile PF00041: Fibronectin type III domain 12 1 9 3 At2g19040 rapid alkalinization factor (RALF) family protein 12 1 9 4 At2g19110 "ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein / heavy-metal-associated domain-containing protein similar to cadmium efflux pump protein from Geobacillus stearothermophilus [GI:16753175], cadmium resistance protein B from Staphylococcus aureus [GI:14020985]; T20K24.13 has been merged with T20K24.12 per suggestion of Dr. Kristian Axelsen (axe@biobase.dk)" 12 1 9 5 At2g19310 expressed protein 12 1 9 6 At2g19385 expressed protein weak similarity to Cell growth regulating nucleolar protein (Swiss-Prot:Q08288) [Mus musculus] 12 1 9 7 At2g19560 proteasome protein-related weak similarity to 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome regulatory subunit S3) (p58) (Transplantation antigen P91A) (Tum-P91A antigen) (Swiss-Prot:P14685) [Mus musculus] 12 1 9 8 At2g19610 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 12 1 9 9 3xSSC 3xSSC 12 1 9 10 At2g22320 hypothetical protein 12 1 9 11 At2g22500 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 12 1 9 12 At2g22570 isochorismatase hydrolase family protein contains Pfam profile PF00857: isochorismatase family protein 12 1 9 13 At2g22760 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 1 9 14 At2g22810 1-aminocyclopropane-1-carboxylate synthase 4 / ACC synthase 4 (ACS4) identical to gi:940370 [GB:U23481] 12 1 9 15 At2g22980 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) from [Oryza sativa] 12 1 9 16 At2g23000 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 12 1 9 17 3xSSC 3xSSC 12 1 9 18 At2g25900 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 12 1 9 19 At2g26070 expressed protein 12 1 9 20 At2g26135 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF01485:IBR domain 12 1 9 21 At2g26320 MADS-box protein (AGL33) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 12 1 9 22 At2g26380 "disease resistance protein-related / LRR protein-related contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon pimpinellifolium] gi|3894389|gb|AAC78594" 12 1 9 23 At2g26540 uroporphyrinogen-III synthase family protein contains Pfam PF02602: uroporphyrinogen-III synthase; weak similarity to Porphyrin biosynthesis protein HEMD)) (Uroporphyrinogen III methylase) (UROM); Uroporphyrinogen-III synthase (EC 4.2.1.75) (Swiss-Prot:Q59294) [Clostridium josui] 12 1 9 24 At2g26580 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein 12 1 9 25 3xSSC 3xSSC 12 1 10 1 At2g29320 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 12 1 10 2 At2g29470 "glutathione S-transferase, putative similar to glutathione S-transferase [Euphorbia esula] gb:AAF64450.1 GI:7595790" 12 1 10 3 At2g29525 expressed protein 12 1 10 4 At2g29660 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 12 1 10 5 At2g29710 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 1 10 6 At2g29890 villin 1 (VLN1) nearly identical to villin 1 (VLN1) [Arabidopsis thaliana] GI:3415113 12 1 10 7 At2g29930 F-box family protein contains F-box domain Pfam:PF00646 12 1 10 8 3xSSC 3xSSC 12 1 10 9 At2g32630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 10 10 At2g32760 expressed protein 12 1 10 11 At2g32800 "protein kinase family protein contains dual protein kinase domains, Pfam:PF00069" 12 1 10 12 At2g32950 COP1 regulatory protein photomorphogenesis repressor; identical to COP1 regulatory protein/FUSCA protein FUS1 GI:402685 SP:P43254 12 1 10 13 At2g33010 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 12 1 10 14 At2g33200 F-box family protein contains F-box domain Pfam:PF00646 12 1 10 15 At2g33250 expressed protein 12 1 10 16 3xSSC 3xSSC 12 1 10 17 At2g35850 hypothetical protein 12 1 10 18 At2g36010 E2F transcription factor-3 (E2F3) identical to E2F transcription factor-3 E2F3 [Arabidopsis thaliana] gi|10443853|gb|AAG17610 12 1 10 19 At2g36060 ubiquitin-conjugating enzyme family protein similar to DNA-binding protein CROC-1B [Homo sapiens] GI:1066082; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 12 1 10 20 At2g36220 expressed protein 12 1 10 21 At2g36270 "bZIP transcription factor family protein / ABA-responsive element-binding protein, putative similar to ABA-responsive element binding protein 1 (AREB1) GI:9967417 from [Arabidopsis thaliana]; contains a bZIP transcription factor basic domain signature (PDOC00036)" 12 1 10 22 At2g36410 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 12 1 10 23 At2g36470 expressed protein 12 1 10 24 3xSSC 3xSSC 12 1 10 25 At2g39120 expressed protein 12 1 11 1 At2g39290 phosphatidylglycerolphosphate synthase (PGS1) identical to phosphatidylglycerolphosphate synthase GI:13365519 from [Arabidopsis thaliana] 12 1 11 2 At2g39350 ABC transporter family protein 12 1 11 3 At2g39500 expressed protein 12 1 11 4 At2g39560 expressed protein 12 1 11 5 At2g39725 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 12 1 11 6 At2g39740 expressed protein 12 1 11 7 3xSSC 3xSSC 12 1 11 8 At2g42270 "U5 small nuclear ribonucleoprotein helicase, putative " 12 1 11 9 At2g42410 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 12 1 11 10 At2g42480 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 12 1 11 11 At2g42610 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 12 1 11 12 At2g42660 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 1 11 13 At2g42830 agamous-like MADS box protein AGL5 / floral homeodomain transcription factor (AGL5) identical to SP|P29385 Agamous-like MADS box protein AGL5 {Arabidopsis thaliana} 12 1 11 14 At2g42885 expressed protein 12 1 11 15 3xSSC 3xSSC 12 1 11 16 At2g45620 "nucleotidyltransferase family protein low similarity to SP|O13833| Caffeine-induced death protein 1 {Schizosaccharomyces pombe}; contains Pfam profiles PF03828: PAP/25A associated domain, PF01909: Nucleotidyltransferase domain" 12 1 11 17 At2g45760 BON1-associated protein (BAP1)-related similar to BON1-associated protein 1 BAP1 [Arabidopsis thaliana] GI:15487384; contains Pfam profile PF00168: C2 domain 12 1 11 18 At2g45820 "DNA-binding protein, putative identical to DNA-binding protein gi|601843|gb|AAA57124 [Arabidopsis thaliana]; contains Pfam domain, PF03766: Remorin, N-terminal region; contains Pfam domain, PF03763: Remorin, C-terminal region" 12 1 11 19 At2g45990 expressed protein 12 1 11 20 At2g46060 transmembrane protein-related contains weak similarity to Swiss-Prot:Q9HCN3 transmembrane protein 8 precursor (M83 protein) [Homo sapiens] 12 1 11 21 At2g46200 expressed protein low similarity to ES18 [Mus musculus] GI:4416181 12 1 11 22 At2g46250 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, muscle (Swiss-Prot:P05661) [Drosophila melanogaster]" 12 1 11 23 3xSSC 3xSSC 12 1 11 24 At3g01620 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 12 1 11 25 At3g01790 ribosomal protein L13 family protein similar to putative ribosomal protein L13 GB:AAC07691 [Aquifex aeolicus] 12 1 12 1 At3g01830 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]; Pfam HMM hit: EF hand" 12 1 12 2 At3g01980 "short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profiles: PF00106 short chain dehydrogenase, PF00678 short chain dehydrogenase/reductase C-terminus" 12 1 12 3 At3g02020 "aspartate kinase, lysine-sensitive, putative similar to aspartate kinase gi:2257743 (Arabidopsis thaliana)" 12 1 12 4 At3g02170 expressed protein 12 1 12 5 At3g02200 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 12 1 12 6 3xSSC 3xSSC 12 1 12 7 At3g04870 "zeta-carotene desaturase (ZDS1) / carotene 7,8-desaturase identical to SP|Q38893 Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) {Arabidopsis thaliana}" 12 1 12 8 At3g05040 expressed protein weak similarity to exportin 5 [Homo sapiens] GI:10444427 12 1 12 9 At3g05090 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to uncharacterized KIAA1449 protein (gi:7959157) [Homo sapiens] 12 1 12 10 At3g05250 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 12 11 At3g05310 GTP-binding protein-related low similarity to rac 1 protein [Physcomitrella patens] GI:7243743; contains Pfam profile PF00036: EF hand (domain) 12 1 12 12 At3g05490 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 12 1 12 13 At3g05530 26S proteasome AAA-ATPase subunit (RPT5a) identical to GB:AAF22525 GI:6652886 from [Arabidopsis thaliana] 12 1 12 14 3xSSC 3xSSC 12 1 12 15 At3g08020 PHD finger protein-related contains low similarity to PHD-finger domain proteins 12 1 12 16 At3g08600 expressed protein 12 1 12 17 At3g08660 "phototropic-responsive protein, putative contains similarity to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 12 1 12 18 At3g08840 D-alanine--D-alanine ligase family similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase) (Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase). (Swiss-Prot:P95803) [Streptococcus mutans] 12 1 12 19 At3g08890 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 12 1 12 20 At3g09020 "alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162] ; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif" 12 1 12 21 At3g09060 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 12 22 3xSSC 3xSSC 12 1 12 23 At3g11580 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857 and RAV2 GI:3868859, AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile PF02362: B3 DNA binding domain" 12 1 12 24 At3g11745 expressed protein 12 1 12 25 At3g11810 expressed protein 12 1 13 1 At3g11930 universal stress protein (USP) family protein similar to ER6 protein GB:AAD46412 GI:5669654 from [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 12 1 13 2 At3g11960 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein similar to Splicing factor 3B subunit 3 (Spliceosome associatedprotein 130) (SAP 130) (SF3b130) (Pre-mRNA splicing factor SF3b 130kDa subunit) (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF A subunit region 12 1 13 3 At3g12100 "cation efflux family protein / metal tolerance protein, putative member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 12 1 13 4 At3g12150 expressed protein 12 1 13 5 3xSSC 3xSSC 12 1 13 6 At3g14620 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 12 1 13 7 At3g14790 "NAD-dependent epimerase/dehydratase family protein similar to dTDP-glucose 4,6-dehydratase from Aneurinibacillus thermoaerophilus GI:16357461, Saccharopolyspora spinosa GI:15077647, RmlB from Leptospira borgpetersenii GI:4234803; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 12 1 13 8 At3g14840 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; contains 2 predicted transmembrane domains 12 1 13 9 At3g14960 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 12 1 13 10 At3g15010 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 12 1 13 11 At3g15150 expressed protein 12 1 13 12 At3g15210 ethylene-responsive element-binding factor 4 (ERF4) identical to ethylene responsive element binding factor 4 SP:O80340 from [Arabidopsis thaliana] 12 1 13 13 3xSSC 3xSSC 12 1 13 14 At3g17840 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GB:AAA33715 from [Petunia integrifolia]" 12 1 13 15 At3g18035 "histone H1/H5 family protein contains Pfam domain, PF00538: linker histone H1 and H5 family;similar to HMG I/Y like protein (GI:15706274) [Glycine max];similar to HMR1 protein (GI:4218141) [Antirrhinum majus]; similar to high mobility group protein (GI:1483173) [Canavalia gladiata]" 12 1 13 16 At3g18090 "DNA-directed RNA polymerase family protein similar to SP|P38420 DNA-directed RNA polymerase II 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 2) {Arabidopsis thaliana}; contains Pfam profiles PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF04566: RNA polymerase Rpb2 domain 4, PF04567: RNA polymerase Rpb2 domain 5" 12 1 13 17 At3g18230 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 12 1 13 18 At3g18290 "zinc finger protein-related weak alignment to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING finger) (2 copies)" 12 1 13 19 At3g18440 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 12 1 13 20 At3g18490 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 12 1 13 21 3xSSC 3xSSC 12 1 13 22 At3g21230 "4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2 [gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum" 12 1 13 23 At3g21400 expressed protein 12 1 13 24 At3g21465 expressed protein 12 1 13 25 At3g21600 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 12 1 14 1 At3g21660 UBX domain-containing protein contains Pfam profile: PF00789 UBX domain 12 1 14 2 At3g21790 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 1 14 3 At3g21850 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At9), putative E3 ubiquitin ligase; similar to Skp1 homolog SKP1a GI:3068807 from [Arabidopsis thaliana]" 12 1 14 4 3xSSC 3xSSC 12 1 14 5 At3g24610 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 12 1 14 6 At3g24780 hypothetical protein 12 1 14 7 At3g24840 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]; similar to SEC14 CYTOSOLIC FACTOR (PHOSPHATIDYLINOSITOL/ PHOSPHATIDYLCHOLINE TRANSFER PROTEIN) GB:P46250 from [Candida albicans] (Yeast (1996) 12(11), 1097-1105); contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 12 1 14 8 At3g25100 cell division control protein-related contains weak similarity to cell division control protein 45 homolog (Suppressor of nda4 protein) (Swiss-Prot:O74113) [Schizosaccharomyces pombe] 12 1 14 9 At3g25160 ER lumen protein retaining receptor family protein similar to SP|P24390 ER lumen protein retaining receptor 1 (KDEL receptor 1) {Homo sapiens}; contains Pfam profile PF00810: ER lumen protein retaining receptor 12 1 14 10 At3g25410 bile acid:sodium symporter family protein low similarity to SP|Q14973 Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 12 1 14 11 At3g25480 rhodanese-like domain-containing protein contains Rhodanese-like domain PF:00581 12 1 14 12 3xSSC 3xSSC 12 1 14 13 At3g28140 calmodulin-binding protein 12 1 14 14 At3g28320 hypothetical protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana] 12 1 14 15 At3g28370 expressed protein 12 1 14 16 At3g28550 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 1 14 17 At3g28610 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 12 1 14 18 At3g28780 glycine-rich protein similar to H41 gene for histone protein GB:X15142 GI:3204 [Physarum polycephalum] 12 1 14 19 At3g28850 glutaredoxin family protein 12 1 14 20 3xSSC 3xSSC 12 1 14 21 At3g42680 hypothetical protein 12 1 14 22 At3g42850 "galactokinase, putative contains some similarity to galactokinase [Pasteurella multocida] SWISS-PROT:P57899" 12 1 14 23 At3g42940 expressed protein 12 1 14 24 At3g43230 zinc finger (FYVE type) family protein contains Pfam domain PF01363: FYVE zinc finger 12 1 14 25 At3g43290 "hypothetical protein glyceraldehyde-3-phosphate dehydrogenase, Equus caballus, EMBL:AF097179" 12 1 15 1 At3g43490 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 1 15 2 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 12 1 15 3 3xSSC 3xSSC 12 1 15 4 At3g46560 "mitochondrial import inner membrane translocase (TIM9) identical to mitochondrial import inner membrane translocase subunit Tim9 [Arabidopsis thaliana] Swiss-Prot:Q9XGX9; contains Pfam domain, PF02953: Tim10/DDP family zinc finger" 12 1 15 5 At3g46740 "chloroplast outer envelope protein, putative similar to chloroplastic outer envelope membrane protein (OEP75) [Pisum sativum] GI:633607; contains Pfam profile PF01103: outer membrane protein, OMP85 family" 12 1 15 6 At3g46800 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 1 15 7 At3g46980 "transporter-related low similarity to brain specific Na+-dependent inorganic phosphate cotransporter from [Rattus norvegicus] GI:507415, [Homo sapiens] GI:7328925, vesicular glutamate transporter 3 from [Rattus norvegicus] GI:21685382; contains Pfam profile PF00083: major facilitator superfamily protein" 12 1 15 8 At3g47040 "glycosyl hydrolase family 3 protein beta-D-glucan exohydrolase, Nicotiana tabacum, TREMBL:AB017502_1" 12 1 15 9 At3g47220 phosphoinositide-specific phospholipase C family protein contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 12 1 15 10 At3g47260 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At5g34900, At3g29210, At2g02210, At3g32900" 12 1 15 11 3xSSC 3xSSC 12 1 15 12 At3g50110 phosphatase-related similar to PTEN1 GI:5566292 from [Drosophila melanogaster]; contains prosite evidence: PS00383: Tyrosine specific protein phosphatases active site 12 1 15 13 At3g50270 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 12 1 15 14 At3g50340 "expressed protein predicted protein, Arabidopsis thaliana" 12 1 15 15 At3g50510 LOB domain family protein / lateral organ boundaries domain family protein (LBD28) identical to SP|Q9SCS4 Putative LOB domain protein 28 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 12 1 15 16 At3g50550 expressed protein isoform contains a non-consensus AT donor site at intron 1 12 1 15 17 At3g50730 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 12 1 15 18 At3g50790 "late embryogenesis abundant protein, putative / LEA protein, putative similar to Picea glauca late embryogenesis abundant protein (EMB8), PID:g1350545 SP|Q40863; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 1 15 19 3xSSC 3xSSC 12 1 15 20 At3g53440 expressed protein 12 1 15 21 At3g53570 protein kinase (AFC1) (AME2) identical to protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana] 12 1 15 22 At3g53610 "Ras-related GTP-binding protein, putative similar to Ras-related protein ARA-3 SP:P28186 from [Arabidopsis thaliana]" 12 1 15 23 At3g53780 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 12 1 15 24 At3g53820 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 12 1 15 25 At3g53970 proteasome inhibitor-related similar to proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from [Homo sapiens] 12 1 16 1 At3g53990 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 12 1 16 2 3xSSC 3xSSC 12 1 16 3 At3g56820 expressed protein 12 1 16 4 At3g56990 "glycine-rich protein conserved hypothetical protein SPCC330.09 - Schizosaccharomyces pombe, PIR:T41319" 12 1 16 5 At3g57050 "cystathionine beta-lyase, chloroplast / beta-cystathionase / cysteine lyase (CBL) identical to SP|P53780 Cystathionine beta-lyase, chloroplast precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) {Arabidopsis thaliana}" 12 1 16 6 At3g57230 "MADS-box protein (AGL16) MADS-box transcription factor DEFH125 - Antirrhinum majus, PIR:T17029; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region" 12 1 16 7 At3g57290 eukaryotic translation initiation factor 3E / eIF3e (TIF3E1) identical to eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gi|12407658|gb|AAG53613 12 1 16 8 At3g57430 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 16 9 At3g57490 "40S ribosomal protein S2 (RPS2D) 40S ribosomal protein S2 - Arabidopsis thaliana, SWISSPROT:RS2_ARATH" 12 1 16 10 3xSSC 3xSSC 12 1 16 11 At3g60310 expressed protein 12 1 16 12 At3g60470 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 12 1 16 13 At3g60530 zinc finger (GATA type) family protein identical to cDNA for GATA transcription factor 4 GI:2959735 12 1 16 14 At3g60690 auxin-responsive family protein similar to auxin-induced protein SAUR-AC1 (GP:546362) (PIR:T06084)[Arabidopsis thaliana] PIR:T06084 12 1 16 15 At3g60750 "transketolase, putative strong similarity to transketolase 1 [Capsicum annuum] GI:3559814; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain, PF00456: Transketolase, thiamine diphosphate binding domain" 12 1 16 16 At3g60910 expressed protein low similarity to PIR|I46078 endothelin converting enzyme from Bos primigenius taurus 12 1 16 17 At3g60970 ABC transporter family protein ABC transporter-like proteins 12 1 16 18 3xSSC 3xSSC 12 1 16 19 At4g00170 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 12 1 16 20 At4g00305 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 16 21 At4g00335 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 16 22 At4g00430 "plasma membrane intrinsic protein, putative identical to transmembrane protein GI:535780 from [Arabidopsis thaliana]; very strong similarity to SP|Q08733 Plasma membrane intrinsic protein 1C (Transmembrane protein B) (TMP-B) {Arabidopsis thaliana}; contains Pfam profile PF00230: Major intrinsic protein;" 12 1 16 23 At4g00500 lipase class 3 family protein / calmodulin-binding heat-shock protein-related 12 1 16 24 At4g00610 DNA-binding storekeeper protein-related similar to storekeeper protein GI:14268476 [Solanum tuberosum] 12 1 16 25 At4g00660 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicases" 12 1 17 1 3xSSC 3xSSC 12 1 17 2 At4g03180 expressed protein 12 1 17 3 At4g03305 hypothetical protein 12 1 17 4 At4g03370 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 1 17 5 At4g03510 zinc finger (C3HC4-type RING finger) family protein (RMA1) identical to RING zinc finger protein RMA1 gi:3164222 12 1 17 6 At4g03565 expressed protein 12 1 17 7 At4g03916 "hypothetical protein low similarity to SP|P07271 DNA repair and recombination protein PIF1, mitochondrial precursor {Saccharomyces cerevisiae}" 12 1 17 8 At4g03970 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At5g28170, At1g35110, At1g44880, At3g42530, At4g19320, At5g36020, At3g43010, At2g10350" 12 1 17 9 3xSSC 3xSSC 12 1 17 10 At4g08780 "peroxidase, putative similar to peroxidase isozyme [Armoracia rusticana] gi|217932|dbj|BAA14143" 12 1 17 11 At4g08920 cryptochrome 1 apoprotein (CRY1) / flavin-type blue-light photoreceptor (HY4) contains Pfam PF03441: FAD binding domain of DNA photolyase; member of Pfam PF00875: deoxyribodipyrimidine photolyase superfamily; 99% identical to Cryptochrome 1 apoprotein (Blue light photoreceptor) (flavin-type blue-light photoreceptor) (SP:Q43125) [Arabidopsis thaliana] 12 1 17 12 At4g08990 "DNA (cytosine-5-)-methyltransferase, putative strong similarity to cytosine-5 methyltransferase (METII) [Arabidopsis thaliana] GI:6523846; contains Pfam profiles PF01426: BAH domain, PF00145: C-5 cytosine-specific DNA methylase" 12 1 17 13 At4g09180 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 1 17 14 At4g09260 hypothetical protein nearly identical with protein T8A17_40 cause of location on repetitive section 12 1 17 15 At4g09490 RNase H domain-containing protein contains Pfam profile PF00075: RNase H 12 1 17 16 At4g09510 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 12 1 17 17 3xSSC 3xSSC 12 1 17 18 At4g12340 expressed protein 12 1 17 19 At4g12500 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 12 1 17 20 At4g12550 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234; identical to cDNA AIR1 mRNA, partial cds GI:3695016" 12 1 17 21 At4g12735 expressed protein 12 1 17 22 At4g12790 "ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein" 12 1 17 23 At4g12960 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 12 1 17 24 At4g13020 serine/threonine protein kinase (MHK) identical to serine/threonine-protein kinase MHK [Arabidopsis thaliana] SWISS-PROT:P43294 12 1 17 25 3xSSC 3xSSC 12 1 18 1 At4g15440 hydroperoxide lyase (HPL1) identical to hydroperoxide lyase GI:3822403 from [Arabidopsis thaliana] 12 1 18 2 At4g15570 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 12 1 18 3 At4g15660 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 12 1 18 4 At4g15800 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 12 1 18 5 At4g15850 "DEAD/DEAH box helicase, putative similar to D-E-A-D box protein [Drosophila melanogaster] GI:499204; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 12 1 18 6 At4g16015 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 1 18 7 At4g16070 "lipase class 3 family protein low similarity to calmodulin-binding heat-shock protein CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam profile PF01764: Lipase, PF03893: Lipase 3 N-terminal region" 12 1 18 8 3xSSC 3xSSC 12 1 18 9 At4g18580 expressed protein 12 1 18 10 At4g18730 60S ribosomal protein L11 (RPL11C) 12 1 18 11 At4g18770 myb family transcription factor (MYB98) identical to transcription factor (MYB98) GI:15375282 from [Arabidopsis thaliana] 12 1 18 12 At4g18940 "cyclic phosphodiesterase, putative similar to cyclic phosphodiesterase [Arabidopsis thaliana] gi|2065013|emb|CAA72363" 12 1 18 13 At4g18990 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase-related protein XTR4 GI:1244754 from [Arabidopsis thaliana]" 12 1 18 14 At4g19110 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 12 1 18 15 At4g19160 expressed protein 12 1 18 16 3xSSC 3xSSC 12 1 18 17 At4g22060 F-box family protein contains F-box domain Pfam:PF00646 12 1 18 18 At4g22210 hypothetical protein 12 1 18 19 At4g22230 expressed protein 12 1 18 20 At4g22350 ubiquitin carboxyl-terminal hydrolase family protein similar to U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens] GI:13926071; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 12 1 18 21 At4g22410 ubiquitin carboxyl-terminal hydrolase family protein similar to U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens] GI:13926071; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 12 1 18 22 At4g22600 hypothetical protein 12 1 18 23 At4g22660 "F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 12 1 18 24 3xSSC 3xSSC 12 1 18 25 At4g25280 adenylate kinase family protein contains Pfam profile: PF00406 adenylate kinase 12 1 19 1 At4g25420 gibberellin 20-oxidase identical to GI:1109695 12 1 19 2 At4g25470 "DRE-binding protein (DREB1C) / CRT/DRE-binding factor 2 (CBF2) identical to DREB1C GI:3738228 from [Arabidopsis thaliana], DREB1C [Arabidopsis thaliana] GI:3660552, CRT/DRE binding factor 2 [Arabidopsis thaliana] GI:4091984; contains Pfam profile PF00847: AP2 domain; identical to cDNA CRT/DRE binding factor 2 (CBF2) GI:4322227" 12 1 19 3 At4g25630 fibrillarin 2 (FIB2) identical to fibrillarin 2 GI:9965655 from [Arabidopsis thaliana] 12 1 19 4 At4g25690 expressed protein 12 1 19 5 At4g25840 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q08623 GS1 protein {Homo sapiens}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 12 1 19 6 At4g25900 aldose 1-epimerase family protein similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] GI:6970044 Pfam profile PF01263: Aldose 1-epimerase 12 1 19 7 3xSSC 3xSSC 12 1 19 8 At4g28470 "26S proteasome regulatory subunit, putative contains Pfam domain PF01851: Proteasome/cyclosome repeat" 12 1 19 9 At4g28620 ABC transporter family protein identical to half-molecule ABC transporter ATM2 GI:9964119 from [Arabidopsis thaliana] 12 1 19 10 At4g28680 "tyrosine decarboxylase, putative similar to SP|P54768 Tyrosine/DOPA decarboxylase 1 [Includes: DOPA decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] {Papaver somniferum}, SP|Q06086 Tyrosine decarboxylase 2 (EC 4.1.1.25) {Petroselinum crispum}; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain" 12 1 19 11 At4g28820 zinc finger (HIT type) family protein contains Pfam profile: PF04438 HIT zinc finger 12 1 19 12 At4g28880 "casein kinase, putative similar to similar to casein kinase I, delta isoform [Arabidopsis thaliana] SWISS-PROT:P42158; contains protein kinase domain, Pfam:PF00069" 12 1 19 13 At4g29060 "elongation factor Ts family protein similar to SP|P35019 Elongation factor Ts (EF-Ts) {Galdieria sulphuraria}; contains Pfam profiles PF00627: UBA/TS-N domain, PF00889: Elongation factor TS, PF00575: S1 RNA binding domain" 12 1 19 14 At4g29120 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein similar to SP|P23523 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) {Escherichia coli}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase 12 1 19 15 3xSSC 3xSSC 12 1 19 16 At4g31730 expressed protein 12 1 19 17 At4g31860 "protein phosphatase 2C, putative / PP2C, putative protein phosphatase 2C, Schizosaccharomyces pombe, PIR2:S54297" 12 1 19 18 At4g31900 "chromatin remodeling factor, putative strong similarity to chromatin remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana] GI:6478518; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 12 1 19 19 At4g32040 homeobox protein knotted-1 like 5 (KNAT5) / homeodomain containing protein 1 (H1) identical to homeobox protein knotted-1 like 5 (KNAT5) SP:P48002 from [Arabidopsis thaliana] 12 1 19 20 At4g32100 hypothetical protein 12 1 19 21 At4g32280 auxin-responsive AUX/IAA family protein contains Pfam profile: PF02309: AUX/IAA family 12 1 19 22 At4g32330 expressed protein 12 1 19 23 AT5G57480 PC-1 A01 12 1 19 24 3XSSC PC-1 A13 12 1 19 25 AT1G29930 PC-1 E01 12 1 20 1 3XSSC PC-1 E13 12 1 20 2 AT3G44150 PC-1 I01 12 1 20 3 3XSSC PC-1 I13 12 1 20 4 AT4G00810 PC-1 M01 12 1 20 5 3XSSC PC-1 M13 12 1 20 6 3xSSC 3xSSC 12 1 20 7 At4g34930 1-phosphatidylinositol phosphodiesterase-related contains weak similarity to 1-phosphatidylinositol phosphodiesterase precursor (EC 4.6.1.13) (Phosphatidylinositol diacylglycerol-lyase) (Phosphatidylinositol- specific phospholipase C) (PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes] 12 1 20 8 At4g35090 "catalase 2 identical to catalase 2 SP:P25819, GI:17865693 from [Arabidopsis thaliana]" 12 1 20 9 At4g35140 "transducin family protein / WD-40 repeat family protein contains 6 (3 significant) WD-40 repeats; similar to PC326 protein (GI:200241) (PIR2:S37694) [Mus musculus]; Human (H326) mRNA, Homo sapiens, gb:U06631" 12 1 20 10 At4g35300 transporter-related low similarity to hexose transporter [Solanum tuberosum] GI:8347246; contains Pfam profile PF00083: major facilitator superfamily protein 12 1 20 11 At4g35350 "cysteine endopeptidase, papain-type (XCP1) identical to papain-type cysteine endopeptidase XCP1 GI:6708181 from [Arabidopsis thaliana]" 12 1 20 12 At4g35490 ribosomal protein L11 family protein several ribosomal proteins L11 12 1 20 13 At4g35530 "phosphatidylinositolglycan-related contains weak similarity to Swiss-Prot:Q14442 phosphatidylinositol-glycan biosynthesis, class H protein (PIG-H) [Homo sapiens]" 12 1 20 14 3xSSC 3xSSC 12 1 20 15 At4g38225 expressed protein 12 1 20 16 At4g38380 "MATE efflux protein-related T19C21.18 Arabidopsis thaliana chromosome II BAC T19C21 genomic sequence, PID:g3395439" 12 1 20 17 At4g38440 expressed protein 12 1 20 18 At4g38600 HECT-domain-containing protein / ubiquitin-transferase family protein similar to SP|Q14669Thyroid receptor interacting protein 12 (TRIP12) {Homo sapiens}; contains Pfam profile PF00632: HECT-domain (ubiquitin-transferase) 12 1 20 19 At4g38670 pathogenesis-related thaumatin family protein similar to receptor serine/threonine kinase PR5K [Arabidopsis thaliana] GI:1235680; contains Pfam profile PF00314: Thaumatin family 12 1 20 20 At4g38850 auxin-responsive protein / small auxin up RNA (SAUR-AC1) identical to GP:546362 small auxin up RNA {Arabidopsis thaliana}; belongs to auxin-induced (indole-3-acetic acid induced) protein family 12 1 20 21 At4g38900 "bZIP protein vsf-1 protein, Lycopersicon esculentum, PIR2:S52203" 12 1 20 22 3xSSC 3xSSC 12 1 20 23 At5g02360 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 1 20 24 At5g02510 hypothetical protein 12 1 20 25 At5g02570 "histone H2B, putative similar to histone H2B-2 Lycopersicon esculentum GI:3021483, Gossypium hirsutum SP|O22582, Asparagus officinalis GI:563329; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 12 1 21 1 At5g02710 expressed protein contains Pfam PF03692: Uncharacterised protein family (UPF0153) 12 1 21 2 At5g02750 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 21 3 At5g02910 F-box family protein similar to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 12 1 21 4 At5g02970 "hydrolase, alpha/beta fold family protein contains Interpro entry IPR000379" 12 1 21 5 3xSSC 3xSSC 12 1 21 6 At5g05710 pleckstrin homology (PH) domain-containing protein similar to AtPH1 [Arabidopsis thaliana] GI:5926716; contains Pfam profile PF00169: PH domain 12 1 21 7 At5g05870 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 1 21 8 At5g05930 guanylyl cyclase-related (GC1) similar to guanylyl cyclase (GC1) GI:21436486 from [Arabidopsis thaliana]; identical to cDNA putative guanylate cyclase GI:21436486 12 1 21 9 At5g06070 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 1 21 10 At5g06120 "Ran-binding protein, putative similar to SP|Q9UIA9 Ran-binding protein 16 {Homo sapiens}; contains Pfam profile PF03810: Importin-beta N-terminal domain" 12 1 21 11 At5g06250 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857 and RAV2 GI:3868859, AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile PF02362: B3 DNA binding domain" 12 1 21 12 At5g06290 "2-cys peroxiredoxin, chloroplast, putative very strong similarity to SP|Q96291 2-cys peroxiredoxin BAS1, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 12 1 21 13 3xSSC 3xSSC 12 1 21 14 At5g09430 "hydrolase, alpha/beta fold family protein low similarity to hydrolases from Rhodococcus sp. EtbD1 GI:3273239, EtbD2 GI:3273241; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 1 21 15 At5g09610 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain)" 12 1 21 16 At5g09670 loricrin-related contains weak similarity to Loricrin (Swiss-Prot:P23490) [Homo sapiens] 12 1 21 17 At5g09840 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 12 1 21 18 At5g09900 "26S proteasome regulatory subunit, putative (RPN5) p55 protein-like" 12 1 21 19 At5g10030 bZIP family transcription factor (OBF4) identical to ocs-element binding factor 4 GI:414613 from [Arabidopsis thaliana] 12 1 21 20 At5g10070 "RNase L inhibitor protein-related contains Pfam profiles PF04034: Domain of unknown function (DUF367), PF04068: Possible metal-binding domain in RNase L inhibitor, RLI" 12 1 21 21 3xSSC 3xSSC 12 1 21 22 At5g13270 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 12 1 21 23 At5g13430 "ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative similar to ubiquinol--cytochrome-c reductase from Solanum tuberosum [SP|P37841], Nicotiana tabacum [SP|P51132] [SP|P51133]; non-consensus AT acceptor splice site at exon 2" 12 1 21 24 At5g13490 "ADP, ATP carrier protein 2, mitochondrial / ADP/ATP translocase 2 / adenine nucleotide translocator 2 (ANT2) identical to SWISS-PROT:P40941 ADP,ATP carrier protein 2, mitochondrial precursor (Adenine nucleotide translocator 2) [Arabidopsis thaliana]" 12 1 21 25 At5g13630 "magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:1154627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein" 12 1 22 1 At5g13680 IKI3 family protein weak similarity to SP|O95163 IkappaB kinase complex-associated protein (IKK complex-associated protein) (p150) {Homo sapiens}; contains Pfam profile PF04762: IKI3 family 12 1 22 2 At5g13840 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Fzr1 (GI:6463679){Homo sapiens} 12 1 22 3 At5g13900 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 12 1 22 4 3xSSC 3xSSC 12 1 22 5 At5g16715 "tRNA synthetase class I (I, L, M and V) family protein similar to SP|P11931 Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (VALRS) {Bacillus stearothermophilus}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 12 1 22 6 At5g16850 telomerase reverse transcriptase (TERT) identical to telomerase reverse transcriptase [Arabidopsis thaliana] GI:5880683 12 1 22 7 At5g16900 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 1 22 8 At5g17070 expressed protein 12 1 22 9 At5g17130 hypothetical protein 12 1 22 10 At5g17290 autophagy protein Apg5 family contains Pfam profile: PF04106 autophagy protein Apg5 12 1 22 11 At5g17340 expressed protein weak similarity to M3.4 protein [Brassica napus] GI:4574746 12 1 22 12 3xSSC 3xSSC 12 1 22 13 At5g19960 RNA recognition motif (RRM)-containing protein low similarity to glycine-rich RNA-binding protein [Euphorbia esula] GI:2645699; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain 12 1 22 14 At5g20120 expressed protein 12 1 22 15 At5g20160 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 12 1 22 16 At5g20330 "beta-1,3-glucanase (BG4) identical to to plant beta-1,3-glucanase bg4 GI:2808438 from [Arabidopsis thaliana]" 12 1 22 17 At5g20390 "beta-1,3-glucanase, putative similar to plant beta-1,3-glucanase bg4 GI:2808438 from [Arabidopsis thaliana]" 12 1 22 18 At5g20580 "expressed protein predicted protein, Arabidopsis thaliana" 12 1 22 19 At5g20620 polyubiquitin (UBQ4) identical to GI:17677 12 1 22 20 3xSSC 3xSSC 12 1 22 21 At5g23970 "transferase family protein similar to acetyl CoA: benzylalcohol acetyltransferase; BEAT [Clarkia breweri][GI:3170250][PMID:9628024], deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034]" 12 1 22 22 At5g24140 squalene monooxygenase 2 / squalene epoxidase 2 (SQP2) identical to SP|O65403 12 1 22 23 At5g24180 lipase class 3-related 12 1 22 24 At5g24316 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 1 22 25 At5g24350 expressed protein weak similarity to neuroblastoma-amplified protein [Homo sapiens] GI:4337460 12 1 23 1 At5g24520 "transparent testa glabra 1 protein (TTG1) identical to transparent testa glabra 1 (Ttg1) protein (GI:10177852) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (4 copies,1 weak);" 12 1 23 2 At5g24580 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 12 1 23 3 3xSSC 3xSSC 12 1 23 4 At5g27560 "expressed protein hypothetical protein slr1702 - Synechocystis sp., PIR:S75312" 12 1 23 5 At5g27730 expressed protein 12 1 23 6 At5g27790 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 1 23 7 At5g27945 "transducin family protein / WD-40 repeat family protein fizzy-related (FZR); contains 6 WD-40 repeats (PF00400); WD-repeat protein, carrot,(gi:2253631) PIR:T14352" 12 1 23 8 At5g28000 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 12 1 23 9 At5g28190 hypothetical protein 12 1 23 10 At5g28240 "hypothetical protein predicted proteins, Arabidopsis thaliana" 12 1 23 11 3xSSC 3xSSC 12 1 23 12 At5g36240 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 1 23 13 At5g36770 expressed protein hypothetical proteins - Arabidopsis thaliana 12 1 23 14 At5g36860 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 12 1 23 15 At5g37030 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 12 1 23 16 At5g37080 "hypothetical protein includes At5g37080, At5g37170, At2g05090" 12 1 23 17 At5g37250 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam domain zinc finger, C3HC4 type (RING finger) PF00097" 12 1 23 18 At5g37310 "endomembrane protein 70, putative multispanning membrane protein, Homo sapiens, EMBL:HSU94831" 12 1 23 19 3xSSC 3xSSC 12 1 23 20 At5g40230 nodulin-related low similarity to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 12 1 23 21 At5g40410 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 23 22 At5g40470 expressed protein 12 1 23 23 At5g40600 hypothetical protein 12 1 23 24 At5g40650 "succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-2) nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-2) [gi:12049600] from Arabidopsis thaliana" 12 1 23 25 At5g40830 expressed protein 12 1 24 1 At5g40880 WD-40 repeat family protein / zfwd3 protein (ZFWD3) contains 5 WD-40 repeats (PF00400); contains Zinc finger C-x8-C-x5-C-x3-H type domain (PF00642); identical to zfwd3 protein (GP:12057168) {Arabidopsis thaliana} 12 1 24 2 3xSSC 3xSSC 12 1 24 3 At5g43620 S-locus protein-related contains some similarity to S-locus protein 4 GI:6069478 from [Brassica rapa] 12 1 24 4 At5g43790 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 1 24 5 At5g43860 chlorophyllase (CLH2) identical to chlorophyllase (CLH2) GI:6729677 from [Arabidopsis thaliana] 12 1 24 6 At5g44000 "glutathione S-transferase C-terminal domain-containing protein contains Pfam domain PF00043: Glutathione S-transferase, C-terminal domain" 12 1 24 7 At5g44050 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 12 1 24 8 At5g44220 F-box family protein similar to unknown protein (pir||T06086) 12 1 24 9 At5g44280 "zinc finger (C3HC4-type RING finger) family protein contains similarity to polycomb-M33 interacting protein Ring1B [Mus musculus] GI:2239142; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 12 1 24 10 3xSSC 3xSSC 12 1 24 11 At5g46840 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 12 1 24 12 At5g47000 "peroxidase, putative " 12 1 24 13 At5g47060 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 12 1 24 14 At5g47210 "nuclear RNA-binding protein, putative similar to nuclear RNA binding protein GI:6492264 from [Arabidopsis thaliana]" 12 1 24 15 At5g47260 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 12 1 24 16 At5g47435 "formyltetrahydrofolate deformylase, putative similar to formyltetrahydrofolate deformylase [strain PCC 6803- Synechocystis sp.] SWISS-PROT:Q55135" 12 1 24 17 At5g47455 expressed protein 12 1 24 18 3xSSC 3xSSC 12 1 24 19 At5g50130 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 12 1 24 20 At5g50290 hypothetical protein 12 1 24 21 At5g50340 DNA repair protein-related similar to RadA [Pseudomonas aeruginosa] GI:1881700 12 1 24 22 At5g50510 hypothetical protein 12 1 24 23 At5g50565 hypothetical protein 12 1 24 24 At5g50770 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 12 1 24 25 At5g50830 expressed protein 12 1 25 1 3xSSC 3xSSC 12 1 25 2 At5g53600 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 12 1 25 3 At5g53790 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 12 1 25 4 At5g53850 haloacid dehalogenase-like hydrolase family protein low similarity to enolase-phosphatase E-1 enzyme [Klebsiella oxytoca] GI:401712; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 12 1 25 5 At5g53980 homeobox-leucine zipper family protein contains Pfam PF00046: Homeobox domain; similar to homeobox protein PpHB5 (GI:7415622) [Physcomitrella patens] 12 1 25 6 At5g54040 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 1 25 7 At5g54170 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 12 1 25 8 At5g54230 myb family transcription factor (MYB49) contains Pfam profile: PF00249 myb-like DNA-binding domain 12 1 25 9 3xSSC 3xSSC 12 1 25 10 At5g57010 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 12 1 25 11 At5g57150 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 1 25 12 At5g57180 expressed protein ; supporting cDNA gi|13991645|gb|AF359387.1|AF359387 12 1 25 13 At5g57340 expressed protein 12 1 25 14 At5g57380 "fibronectin type III domain-containing protein / PHD finger protein-related contains Pfam profiles PF00041: Fibronectin type III domain, PF00628: PHD-finger" 12 1 25 15 At5g57560 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (TCH4) identical to xyloglucan endotransglycosylase TCH4 protein GI:886116 12 1 25 16 At5g57610 "protein kinase family protein similar to protein kinase [Glycine max] GI:170047, MAP3K delta-1 protein kinase [Arabidopsis thaliana] GI:2253010; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 12 1 25 17 3xSSC 3xSSC 12 1 25 18 At5g60200 Dof-type zinc finger domain-containing protein similar to dof6 zinc finger protein GI:5689615 from [Arabidopsis thaliana] 12 1 25 19 At5g60360 "cysteine proteinase, putative / AALP protein (AALP) identical to AALP protein GI:7230640 from [Arabidopsis thaliana]; similar to barley aleurain" 12 1 25 20 At5g60400 expressed protein 12 1 25 21 At5g60560 F-box family protein contains Pfam profile: PF00646 F-box domain 12 1 25 22 At5g60600 "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, putative / GcpE family protein similar to GcpE [Plasmodium falciparum] GI:13094969; contains Pfam profile PF04551: GcpE protein; supporting cDNA gi|27462471|gb|AF434673.1" 12 1 25 23 At5g60750 CAAX amino terminal protease family protein contains Pfam profile PF02517 CAAX amino terminal protease family protein 12 1 25 24 At5g60810 hypothetical protein 12 1 25 25 3xSSC 3xSSC 12 1 26 1 At5g63550 expressed protein 12 1 26 2 At5g63720 hypothetical protein 12 1 26 3 At5g63780 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 1 26 4 At5g63940 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 12 1 26 5 At5g63990 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 12 1 26 6 At5g64150 "methylase family protein contains TIGRfam TIGR00536: modification methylase, HemK family" 12 1 26 7 At5g64200 "arginine/serine-rich splicing factor SC35 contains similarity to splicing factor; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 12 1 26 8 3xSSC 3xSSC 12 1 26 9 At5g66660 hypothetical protein 12 1 26 10 At5g66810 expressed protein similar to unknown protein (gb|AAB71479.1|) 12 1 26 11 At5g66860 expressed protein 12 1 26 12 At5g67010 "AP2 domain-containing transcription factor, putative similar to RAP2.6 (GI:17065542) {Arabidopsis thaliana}" 12 1 26 13 At5g67060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 1 26 14 At5g67220 nitrogen regulation family protein similar to unknown protein (gb|AAF51525.1) ; contains Pfam domain PF01207: Dihydrouridine synthase (Dus); similar to (SP:P45672) NIFR3-like protein (SP:P45672) [Azospirillum brasilense] 12 1 26 15 At5g67270 "microtubule-associated EB1 family protein similar to SP|Q9UPY8 Microtubule-associated protein RP/EB family member 3 (Protein EB3) {Homo sapiens}; contains Pfam profiles PF00307: Calponin homology (CH) domain, PF03271: EB1 protein" 12 1 26 16 3xSSC 3xSSC 12 1 26 17 At3g42680 hypothetical protein 12 1 26 18 At3g42850 "galactokinase, putative contains some similarity to galactokinase [Pasteurella multocida] SWISS-PROT:P57899" 12 1 26 19 At3g42940 expressed protein 12 1 26 20 At3g43230 zinc finger (FYVE type) family protein contains Pfam domain PF01363: FYVE zinc finger 12 1 26 21 At3g43290 "hypothetical protein glyceraldehyde-3-phosphate dehydrogenase, Equus caballus, EMBL:AF097179" 12 1 26 22 At3g43490 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 1 26 23 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 12 1 26 24 Blank Blank 12 1 26 25 Blank Blank 12 2 1 1 3xSSC 3xSSC 12 2 1 2 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 2 1 3 atc12 Randomly generated negative control 12 2 1 4 Alien6 Control: Stratagene Spotreport Alien Oligo 12 2 1 5 atc02 Randomly generated negative control 12 2 1 6 atc08 Randomly generated negative control 12 2 1 7 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 12 2 1 8 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 12 2 1 9 3xSSC 3xSSC 12 2 1 10 At1g03475 "coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative similar to coproporphyrinogen III oxidase, chloroplast [precursor] from Glycine max [SP|P35055], Nicotiana tabacum [SP|Q42946], Hordeum vulgare [SP|Q42840], ESTs gb|AA586260 and dbj|D48620; contains Pfam domain coproporphyrinogen III oxidase, aerobic [PF01218]" 12 2 1 11 At1g03687 DTW domain-containing protein contains Pfam PF03942: DTW domain 12 2 1 12 At1g03740 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 1 13 At1g03870 fasciclin-like arabinogalactan-protein (FLA9) identical to gi_13377784_gb_AAK20861 12 2 1 14 At1g03920 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 12 2 1 15 At1g04080 "hydroxyproline-rich glycoprotein family protein Contains similarity to pre-mRNA processing protein PRP39 gb L29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, gb|N38703 and gb|AA651043 come from this gene" 12 2 1 16 At1g04140 "transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to neural cell adhesion molecule 2, large isoform precursor gb|M76710 from Xenopus laevis, and beta transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from" 12 2 1 17 3xSSC 3xSSC 12 2 1 18 At1g06820 "carotenoid isomerase, putative similar to carotenoid isomerase from Lycopersicon esculentum [gi:19550437]; contains Pfam profile: PF02032 Phytoene dehydrogenase related enzyme" 12 2 1 19 At1g07000 exocyst subunit EXO70 family protein similar to leucine zipper protein GI:10177020 from [Arabidopsis thaliana] contains Pfam domain PF03081: Exo70 exocyst complex subunit; 12 2 1 20 At1g07050 CONSTANS-like protein-related contains similarity to photoperiod sensitivity quantitative trait locus (Hd1) GI:11094203 from [Oryza sativa]; similar to Zinc finger protein constans-like 15 (SP:Q9FHH8) {Arabidopsis thaliana} 12 2 1 21 At1g07230 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 12 2 1 22 At1g07290 nucleotide-sugar transporter family protein similar to SP|Q941R4 GDP-mannose transporter {Arabidopsis thaliana} 12 2 1 23 At1g07420 sterol 4-alpha-methyl-oxidase 2 (SMO2) identical to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase GI:16973470 12 2 1 24 At1g07470 "transcription factor IIA large subunit, putative / TFIIA large subunit, putative nearly identical to transcription factor IIA large subunit GI:2826884 from [Arabidopsis thaliana]; contains Pfam profile: PF03153 transcription factor IIA, alpha/beta subunit" 12 2 1 25 3xSSC 3xSSC 12 2 2 1 At1g09970 "leucine-rich repeat transmembrane protein kinase, putative Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene isoform contains a TG acceptor site at intron." 12 2 2 2 At1g10130 "calcium-transporting ATPase 3, endoplasmic reticulum-type (ACA6) (ECA3) nearly identical to SP|Q9SY55 Calcium-transporting ATPase 3, endoplasmic reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana); contains InterPro Accession IPR006069: Cation transporting ATPase" 12 2 2 3 At1g10190 expressed protein similar to hypothetical protein GB:CAB10284 contains Pfam profile PF03080: Arabidopsis proteins of unknown function 12 2 2 4 At1g10360 "glutathione S-transferase, putative similar to glutathione S-transferase (sp|Q03666|GTX4_TOBAC); similar to EST gb|H36275 gb:AB039930." 12 2 2 5 At1g10410 expressed protein similar to ESTs gb|N96021 and gb|N96863 12 2 2 6 At1g10570 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to EST gb|N96456" 12 2 2 7 At1g10600 mov34 family protein similar to AMSH [Homo sapiens] GI:4098124; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 12 2 2 8 3xSSC 3xSSC 12 2 2 9 At1g13320 "serine/threonine protein phosphatase 2A (PP2A) 65 kDa regulatory subunit, putative similar to protein phosphatase 2A 65 kDa regulatory subunit GI:683502 from [Arabidopsis thaliana]" 12 2 2 10 At1g13490 hypothetical protein 12 2 2 11 At1g13550 expressed protein ; expression supported by MPSS 12 2 2 12 At1g13730 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)" 12 2 2 13 At1g13790 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 12 2 2 14 At1g13970 expressed protein 12 2 2 15 At1g14030 "ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative strong similarity to SP|P94026 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose- bisphosphate-carboxylase]-lysine N-methyltransferase) {Nicotiana tabacum}; contains Pfam profile PF00856: SET domain; Rare GC intron splice site at 49572 is inferred from protein alignment and is not confirmed experimentally" 12 2 2 16 3xSSC 3xSSC 12 2 2 17 At1g16710 "TAZ zinc finger family protein / zinc finger (ZZ type) family protein contains Pfam profiles PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type" 12 2 2 18 At1g16860 merozoite surface protein-related contains weak similarity to merozoite surface protein [Plasmodium falciparum] gi|12043655|gb|AAG47601 12 2 2 19 At1g16890 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 12 2 2 20 At1g17070 D111/G-patch domain-containing protein Similar to SP|Q9ERA6 Tuftelin-interacting protein 11 {Mus musculus}; contains Pfam profile PF01585: G-patch domain 12 2 2 21 At1g17130 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] 12 2 2 22 At1g17290 "alanine aminotransferase, putative similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GB:AAC62456 GI:3694807 from [Zea mays], GI:4730884 from Oryza sativa" 12 2 2 23 At1g17350 auxin-induced-related / indole-3-acetic acid induced-related similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesnerian] 12 2 2 24 3xSSC 3xSSC 12 2 2 25 At1g20300 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 12 2 3 1 At1g20480 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to SP|Q9S725 from Arabidopsis thaliana and SP|P17814 from Oryza sativa; contains Pfam AMP-binding enzyme domain PF00501 12 2 3 2 At1g20520 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 12 2 3 3 At1g20680 expressed protein contains Pfam profile PF05742: Protein of unknown function (DUF833) 12 2 3 4 At1g20720 helicase-related similar to BRCA1-binding helicase-like protein BACH1 (GI:13661819) Homo sapiens].; 12 2 3 5 At1g20880 "RNA recognition motif (RRM)-containing protein similar to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); is the location of EST 197B1T7 , gb|AA597386" 12 2 3 6 At1g20930 "cell division control protein, putative cdc2MsF [Medicago sativa] gi|1806146|emb|CAA65982" 12 2 3 7 3xSSC 3xSSC 12 2 3 8 At1g23670 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 12 2 3 9 At1g23820 spermidine synthase 1 (SPDSYN1) / putrescine aminopropyltransferase 1 identical to SP|Q9ZUB3 Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) {Arabidopsis thaliana} 12 2 3 10 At1g23870 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 12 2 3 11 At1g24020 Bet v I allergen family protein similar to major pollen allergen Bet v 1 GB:CAA96544 GI:1321726 from [Betula pendula]; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 12 2 3 12 At1g24060 expressed protein 12 2 3 13 At1g24240 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 12 2 3 14 At1g24265 expressed protein 12 2 3 15 3xSSC 3xSSC 12 2 3 16 At1g28040 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 12 2 3 17 At1g28160 ethylene-responsive element-binding family protein contains similarity to ethylene-responsive element binding factor GI:8809573 from (Nicotiana sylvestris) 12 2 3 18 At1g28210 "DNAJ heat shock protein, putative strong similarity to mitochondrial DnaJ protein (AtJ1) GI:564030 from [Arabidopsis thaliana]; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats); identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029" 12 2 3 19 At1g28350 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 12 2 3 20 At1g28395 expressed protein 12 2 3 21 At1g28540 expressed protein 12 2 3 22 At1g28580 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 12 2 3 23 3xSSC 3xSSC 12 2 3 24 At1g31780 conserved oligomeric Golgi complex component-related / COG complex component-related similar to Conserved oligomeric Golgi complex component 6 (Swiss-Prot:Q9Y2V7) [Homo sapiens]; 12 2 3 25 At1g31930 "extra-large guanine nucleotide binding protein, putative / G-protein, putative similar to extra-large G-protein (XLG) [Arabidopsis thaliana] GI:3201680; contains Pfam profile PF00503: G-protein alpha subunit" 12 2 4 1 At1g32000 hypothetical protein 12 2 4 2 At1g32190 expressed protein 12 2 4 3 At1g32230 "WWE domain-containing protein / ceo protein, putative (CEO) contains Pfam domain, PF02825: WWE domain; identical to cDNA for ceo protein (ceo gene) GI:11044956" 12 2 4 4 At1g32375 F-box family protein contains F-box domain Pfam:PF00646 12 2 4 5 At1g32410 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 12 2 4 6 3xSSC 3xSSC 12 2 4 7 At1g36020 hypothetical protein 12 2 4 8 At1g36390 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform b [Chlamydomonas reinhardtii] GI:15384279; contains Pfam profile PF01025: co-chaperone GrpE 12 2 4 9 At1g36580 "2,4-dienoyl-CoA reductase-related low similarity to peroxisomal 2,4-dienoyl-CoA reductase [Homo sapiens] GI:9967554" 12 2 4 10 At1g37015 hypothetical protein 12 2 4 11 At1g37130 nitrate reductase 2 (NR2) identical to SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1) (NR2) {Arabidopsis thaliana} 12 2 4 12 At1g40133 hypothetical protein 12 2 4 13 At1g41810 hypothetical protein 12 2 4 14 3xSSC 3xSSC 12 2 4 15 At1g48240 novel plant SNARE 12 (NPSN12) identical to Novel plant SNARE 12 (AtNPSN12) (Swiss-Prot:Q9LNH6) [Arabidopsis thaliana] 12 2 4 16 At1g48410 "argonaute protein (AGO1) identical to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 12 2 4 17 At1g48470 "glutamine synthetase, putative similar to glutamine synthetase, cytosolic isozyme (glutamate-- ammonia ligase, GS1) [Arabidopsis thaliana] SWISS-PROT:Q9LVI8" 12 2 4 18 At1g48610 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 12 2 4 19 At1g48660 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 12 2 4 20 At1g48850 "chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative similar to chorismate synthase from Lycopersicon esculentum [SP|Q42884], Corydalis sempervirens [SP|P27793]; contains Pfam chorismate synthase domain PF01264" 12 2 4 21 At1g48920 "nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa]" 12 2 4 22 3xSSC 3xSSC 12 2 4 23 At1g51960 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 12 2 4 24 At1g52130 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 12 2 4 25 At1g52160 metallo-beta-lactamase family protein 12 2 5 1 At1g52330 expressed protein ; expression supported by MPSS 12 2 5 2 At1g52400 "glycosyl hydrolase family 1 protein / beta-glucosidase, putative (BG1) contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to GI:6651430 from [Arabidopsis thaliana]" 12 2 5 3 At1g52530 expressed protein ; expression supported by MPSS 12 2 5 4 At1g52580 "rhomboid family protein contains PFAM domain PF01694, Rhomboid family" 12 2 5 5 3xSSC 3xSSC 12 2 5 6 At1g55320 acyl-activating enzyme 18 (AAE18) nearly identical to acyl-activating enzyme 18 [Arabidopsis thaliana] GI:29893268; similar to acetyl-CoA synthetase [SP|P27095] from Methanothrix soehngenii; contains Pfam AMP-binding enzyme domain PF00501l; identical to cDNA acyl-activating enzyme 18 (At1g55320) GI: 29893267 12 2 5 7 At1g55450 embryo-abundant protein-related similar to embryo-abundant protein GI:1350531 from [Picea glauca] 12 2 5 8 At1g55510 "2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 beta subunit, putative strong similarity to branched chain alpha-keto acid dehydrogenase E1 beta subunit [Arabidopsis thaliana] GI:7021286; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain" 12 2 5 9 At1g55640 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor 1 (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 12 2 5 10 At1g55690 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and Phosphatidylinositol Transfer Protein GB:2780955 GI:2780955 [Saccharomyces cerevisiae] 12 2 5 11 At1g55850 "cellulose synthase family protein similar to cellulose synthase catalytic subunit [gi:13925881] from Nicotiana alata, cellulose synthase-5 [gi:9622882] from Zea mays" 12 2 5 12 At1g55890 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 2 5 13 3xSSC 3xSSC 12 2 5 14 At1g60610 expressed protein 12 2 5 15 At1g60790 expressed protein 12 2 5 16 At1g60850 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514322; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 12 2 5 17 At1g61000 Nuf2 family protein contains Pfam PF03800: Nuf2 family domain; similar to Myosin-like protein NUF2 (Nuclear filament-containing protein 2) (Nuclear division protein nuf2) (Swiss-Prot:Q10173) [Schizosaccharomyces pombe] 12 2 5 18 At1g61060 F-box family protein contains Pfam profile PF00646: F-box domain 12 2 5 19 At1g61200 homeobox-leucine zipper protein-related similar to SP|Q02283 Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) {Arabidopsis thaliana} 12 2 5 20 At1g61260 expressed protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 12 2 5 21 3xSSC 3xSSC 12 2 5 22 At1g64070 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 12 2 5 23 At1g64235 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile PF00234:Protease inhibitor/seed storage/LTP family; low similarity to SP:P82353 Nonspecific lipid-transfer protein 2 (LTP 2) {Prunus armeniaca} 12 2 5 24 At1g64300 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 5 25 At1g64460 phosphatidylinositol 3- and 4-kinase family protein contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 12 2 6 1 At1g64520 "26S proteasome regulatory subunit, putative (RPN12) similar to 26S proteasome regulatory complex subunit p30 GB:AAF08395 GI:6434966 from [Drosophila melanogaster]" 12 2 6 2 At1g64690 expressed protein 12 2 6 3 At1g64750 DSS1/SEM1 family protein contains Pfam profile PF05160: DSS1/SEM1 family 12 2 6 4 3xSSC 3xSSC 12 2 6 5 At1g67620 expressed protein contains Pfam domain PF02410: Domain of unknown function DUF143 12 2 6 6 At1g67760 "T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative similar to chaperonin containing TCP-1 (CCT) epsilon subunit [Tetrahymena pyriformis] GI:15824416, SP|P80316 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) {Mus musculus}" 12 2 6 7 At1g67810 Fe-S metabolism associated domain-containing protein contains Pfam PF02657: Fe-S metabolism associated domain 12 2 6 8 At1g67930 "Golgi transport complex protein-related similar to golgi transport complex protein (GTC90) GB:5453670 [Homo sapiens] (stimulates in vitro Golgi transport J. Biol. Chem. 273 (45), 29565-29576 (1998))" 12 2 6 9 At1g67980 "caffeoyl-CoA 3-O-methyltransferase, putative similar to GI:2960356 [Populus balsamifera subsp. trichocarpa], GI:684942 [Medicago sativa subsp. sativa]" 12 2 6 10 At1g68120 expressed protein 12 2 6 11 At1g68180 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 2 6 12 3xSSC 3xSSC 12 2 6 13 At1g70890 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294062] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 12 2 6 14 At1g71050 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated protein ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 12 2 6 15 At1g71110 expressed protein 12 2 6 16 At1g71280 "DEAD/DEAH box helicase, putative contains Pfam profile: PF00270 DEAD/DEAH box helicase" 12 2 6 17 At1g71320 S locus F-box-related / SLF-related contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to S locus F-box (SLF)-S2-like protein (GI:13161528) [Antirrhinum hispanicum] 12 2 6 18 At1g71500 "Rieske [2Fe-2S] domain-containing protein contains Pfam profile PF00355: iron-sulfur cluster-binding protein, rieske family" 12 2 6 19 At1g71691 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile: PF00657 Lipase Acylhydrolase with GDSL-like motif" 12 2 6 20 3xSSC 3xSSC 12 2 6 21 At1g74420 "xyloglucan fucosyltransferase, putative (FUT3) identical to SP|Q9CA71 Probable fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 12 2 6 22 At1g74590 "glutathione S-transferase, putative similar to putative glutathione S-transferase GB:CAA10060 [Arabidopsis thaliana]; contains Pfam profile: PF00043 Glutathione S-transferases" 12 2 6 23 At1g74660 zinc finger homeobox family protein / ZF-HD homeobox family protein contains Pfam PF04770: ZF-HD protein dimerisation region; contains TIGRFAM TIGR01566: ZF-HD homeobox protein Cys/His-rich dimerization domain; similar to ZF-HD homeobox protein (GI:13374061) [Flaveria bidentis] 12 2 6 24 At1g74840 myb family transcription factor similar to myb-related transcription activator GI:9279717 from [Arabidopsis thaliana] 12 2 6 25 At1g74900 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 12 2 7 1 At1g75080 brassinosteroid signalling positive regulator (BZR1) identical to to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 12 2 7 2 At1g75120 expressed protein 12 2 7 3 AT5G57480 PC-1 B01 12 2 7 4 3XSSC PC-1 B13 12 2 7 5 AT1G29930 PC-1 F01 12 2 7 6 3XSSC PC-1 F13 12 2 7 7 AT3G44150 PC-1 J01 12 2 7 8 3XSSC PC-1 J13 12 2 7 9 AT4G00810 PC-1 N01 12 2 7 10 3XSSC PC-1 N13 12 2 7 11 3xSSC 3xSSC 12 2 7 12 At1g77890 expressed protein 12 2 7 13 At1g78070 "WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat" 12 2 7 14 At1g78120 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q99615 DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein 2) {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 12 2 7 15 At1g78270 "UDP-glucose glucosyltransferase, putative similar to UDP-glucose glucosyltransferase GI:3928543 from [Arabidopsis thaliana]" 12 2 7 16 At1g78340 "glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya]" 12 2 7 17 At1g78520 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 12 2 7 18 At1g78580 "alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 12 2 7 19 3xSSC 3xSSC 12 2 7 20 At2g01190 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein Pfam profile PF00564: PB1 domain 12 2 7 21 At2g01320 ABC transporter family protein 12 2 7 22 At2g01370 "DNA-binding storekeeper protein-related contains Pfam PF04504: Protein of unknown function, DUF573; similar to storekeeper protein GI:14268476 [Solanum tuberosum]" 12 2 7 23 At2g01530 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:20810] 12 2 7 24 At2g01600 epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 12 2 7 25 At2g01750 expressed protein 12 2 8 1 At2g01800 "COP1-interacting protein-related similar to COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646, COP1-interacting protein 4.1 (CIP4.1) [Arabidopsis thaliana] GI:13160650" 12 2 8 2 3xSSC 3xSSC 12 2 8 3 At2g05060 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 8 4 At2g05260 lipase class 3 family protein contains Pfam profile PF01764: Lipase 12 2 8 5 At2g05330 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain 12 2 8 6 At2g05562 hypothetical protein 12 2 8 7 At2g05620 expressed protein 12 2 8 8 At2g05850 serine carboxypeptidase S10 family protein similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase 12 2 8 9 At2g05910 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 12 2 8 10 3xSSC 3xSSC 12 2 8 11 At2g14095 expressed protein 12 2 8 12 At2g14330 "hypothetical protein siimilar to At3g45350, At4g09400" 12 2 8 13 At2g14460 expressed protein 12 2 8 14 At2g14670 "sucrose transporter, putative / sucrose-proton symporter, putative similar to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094, SUC2 [Arabidopsis thaliana] GI:407092, sucrose transporter [Arabidopsis thaliana] GI:12057172; contains Pfam profile PF00083: major facilitator superfamily protein" 12 2 8 15 At2g14740 "vacuolar sorting receptor, putative nearly identical to vacuolar sorting receptor homolog [Arabidopsis thaliana] GI:1737220; contains a calcium-binding EGF-like domain signature" 12 2 8 16 At2g14870 RNA recognition motif (RRM)-containing protein low similarity to SP|Q10572 Sex determination protein fox-1 (Feminizing locus on X protein 1) {Caenorhabditis elegans}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 12 2 8 17 At2g14910 expressed protein 12 2 8 18 3xSSC 3xSSC 12 2 8 19 At2g18040 "peptidyl-prolyl cis-trans isomerase (PIN1) / cyclophilin / rotamase identical to Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana GI:22218833; contains Pfam profile PF00639: PPIC-type PPIASE domain" 12 2 8 20 At2g18193 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 12 2 8 21 At2g18240 "RER1 protein, putative similar to SP|O48671 RER1B protein (AtRER1B) {Arabidopsis thaliana}, SP|O48670 RER1A protein (AtRER1A) {Arabidopsis thaliana}; contains Pfam profile PF03248: Rer1 family" 12 2 8 22 At2g18380 zinc finger (GATA type) family protein 12 2 8 23 At2g18450 "succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, putative / flavoprotein subunit of complex II, putative strong similarity to SP|O82663 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) {Arabidopsis thaliana}" 12 2 8 24 At2g18610 hypothetical protein 12 2 8 25 At2g18670 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 2 9 1 3xSSC 3xSSC 12 2 9 2 At2g21385 expressed protein 12 2 9 3 At2g21560 expressed protein contains weak similarity to reticulocyte-binding protein 2 homolog A [Plasmodium falciparum] gi|9754767|gb|AAF98066 12 2 9 4 At2g21620 universal stress protein (USP) family protein / responsive to dessication protein (RD2) strong similarity to RD2 protein [Arabidopsis thaliana] GI:15320408; contains Pfam profile PF00582: universal stress protein family; identical to cDNA RD2 GI:15320407 12 2 9 5 At2g21810 "CHP-rich zinc finger protein, putative " 12 2 9 6 At2g21870 expressed protein 12 2 9 7 At2g22010 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 2 9 8 At2g22080 expressed protein 12 2 9 9 3xSSC 3xSSC 12 2 9 10 At2g25010 expressed protein 12 2 9 11 At2g25220 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 9 12 At2g25280 expressed protein 12 2 9 13 At2g25460 expressed protein 12 2 9 14 At2g25520 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 12 2 9 15 At2g25660 expressed protein 12 2 9 16 At2g25720 expressed protein 12 2 9 17 3xSSC 3xSSC 12 2 9 18 At2g28370 expressed protein contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana] 12 2 9 19 At2g28550 AP2 domain-containing transcription factor RAP2.7 (RAP2.7) nearly identical to AP2 domain transcription factor RAP2.7 (GI:2281639) [Arabidopsis thaliana] 12 2 9 20 At2g28590 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 9 21 At2g28755 UDP-D-glucuronate carboxy-lyase-related contains similarity to UDP-D-glucuronate carboxy-lyase GI:13591616 from [Pisum sativum] 12 2 9 22 At2g28800 chloroplast membrane protein (ALBINO3) Oxa1p homolog {PMID:11148275}; identical to chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] GI:2209332 12 2 9 23 At2g28990 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 2 9 24 At2g29070 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 12 2 9 25 3xSSC 3xSSC 12 2 10 1 At2g31800 "ankyrin protein kinase, putative similar to ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674; contains Pfam profile PF00023: Ankyrin repeat; identical to cDNA calcineurin B-like protein 10 (CBL10) GI:29150247; blastp match of 67% identity and 1.9e-200 P-value to GP|18700701|gb|AAL78674.1|AF458699_1|AF458699 ankyrin-kinase {Medicago truncatula}" 12 2 10 2 At2g31945 expressed protein 12 2 10 3 At2g31985 expressed protein 12 2 10 4 At2g32160 expressed protein 12 2 10 5 At2g32220 60S ribosomal protein L27 (RPL27A) 12 2 10 6 At2g32350 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 2 10 7 At2g32410 "auxin-resistance protein, putative strong similarity to SP|P42744 Auxin-resistance protein AXR1 {Arabidopsis thaliana}; contains Pfam profile PF00899: ThiF family" 12 2 10 8 3xSSC 3xSSC 12 2 10 9 At2g35040 "AICARFT/IMPCHase bienzyme family protein similar to SP|P12048 Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] {Bacillus subtilis}; contains Pfam profiles PF01808: AICARFT/IMPCHase bienzyme, PF02142: MGS-like domain" 12 2 10 10 At2g35210 human Rev interacting-like family protein / hRIP family protein similar to ARFGAP1 protein GI:7211442 from [Homo sapiens]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 12 2 10 11 At2g35250 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 12 2 10 12 At2g35430 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 12 2 10 13 At2g35500 shikimate kinase-related low similarity to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497] 12 2 10 14 At2g35630 microtubule organization 1 protein (MOR1) identical to microtubule organization 1 protein GI:14317953 from [Arabidopsis thaliana] 12 2 10 15 At2g35660 "monooxygenase family protein nearly identical to CTF2A [GI:4164576][Plant Physiol. 119, 364 (1999), PGR99-008]" 12 2 10 16 3xSSC 3xSSC 12 2 10 17 At2g38290 ammonium transporter 2 (AMT2) identical to SP|Q9M6N7 Ammonium transporter 2 (AtAMT2) {Arabidopsis thaliana} 12 2 10 18 At2g38460 iron transporter-related contains transmembrane domains; similar to iron-regulated transporter IREG1 (GI:7264727) [Mus musculus]; similar to ferroportin1 (GI:7109247) [Mus musculus] 12 2 10 19 At2g38510 MATE efflux protein-related contains Pfam profile PF01554: Uncharacterized membrane protein family 12 2 10 20 At2g38695 hypothetical protein 12 2 10 21 At2g38750 annexin 4 (ANN4) nearly identical to annexin (AnnAt4) [Arabidopsis thaliana] GI:6503084; contains Pfam profile PF00191: Annexin 12 2 10 22 At2g38860 "proteaseI (pfpI)-like protein (YLS5) contains Pfam profile PF01965: DJ-1/PfpI family; supporting cDNA gi|13122287|dbj|AB047808.1|; identical to proteaseI (pfpI)-like protein [Arabidopsis thaliana] GI:13122288, cDNA proteaseI (pfpI)-like protein GI:13122287" 12 2 10 23 At2g38900 "serine protease inhibitor, potato inhibitor I-type family protein similar to SP|P24076 Glu S.griseus protease inhibitor (BGIA) {Momordica charantia}, SP|P20076 Ethylene-responsive proteinase inhibitor I precursor {Lycopersicon esculentum}; contains Pfam profile PF00280: Potato inhibitor I family" 12 2 10 24 3xSSC 3xSSC 12 2 10 25 At2g41490 UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase identical to GI:5804772 12 2 11 1 At2g41640 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 12 2 11 2 At2g41700 ABC transporter family protein similar to ATP-binding cassette transporter ABCA1 GI:18031705 from [Arabidopsis thaliana] 12 2 11 3 At2g41830 "cyclin-related contains Pfam profile PF02984: Cyclin, C-terminal domain" 12 2 11 4 At2g41870 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 12 2 11 5 At2g42030 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 2 11 6 At2g42090 "actin, putative similar to SP|P53496 Actin 11 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin" 12 2 11 7 3xSSC 3xSSC 12 2 11 8 At2g44740 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 12 2 11 9 At2g44900 "armadillo/beta-catenin repeat family protein / F-box family protein contains similarity to F-box protein FBL2 GI:6010699 from [Rattus norvegicus]; contains Pfam profiles PF00514: Armadillo/beta-catenin-like repeat, PF00646: F-box domain" 12 2 11 10 At2g44940 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana]; contains pFAM domain (PF00847)" 12 2 11 11 At2g45110 "beta-expansin, putative (EXPB4) similar to beta-expansin GI:16517013 from [Oryza sativa]; beta-expansin gene family, PMID:11641069" 12 2 11 12 At2g45150 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 12 2 11 13 At2g45340 "leucine-rich repeat transmembrane protein kinase, putative " 12 2 11 14 At2g45410 LOB domain protein 19 / lateral organ boundaries domain protein 19 (LBD19) identical to SP|O22132 LOB domain protein 19 {Arabidopsis thaliana} 12 2 11 15 3xSSC 3xSSC 12 2 11 16 At2g48070 expressed protein 12 2 11 17 At3g01010 UDP-glucose/GDP-mannose dehydrogenase family protein similar to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profile PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain 12 2 11 18 At3g01060 expressed protein 12 2 11 19 At3g01200 expressed protein contains Pfam domain PF03618: Domain of unknown function (DUF299) 12 2 11 20 At3g01260 "aldose 1-epimerase family protein similar to non-cell-autonomous protein pathway2, plasmodesmal receptor [Nicotiana tabacum] GI:15824567; contains Pfam profile PF01263: Aldose 1-epimerase" 12 2 11 21 At3g01390 "vacuolar ATP synthase subunit G 1 (VATG1) / V-ATPase G subunit 1 (VAG1) / vacuolar proton pump G subunit 1 (VMA10) identical to SWISS-PROT:O82628 vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1, Vacuolar proton pump G subunit 1) [Arabidopsis thaliana]" 12 2 11 22 At3g01440 oxygen evolving enhancer 3 (PsbQ) family protein photosystem II oxygen-evolving complex protein; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ) 12 2 11 23 3xSSC 3xSSC 12 2 11 24 At3g04060 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 12 2 11 25 At3g04240 "O-linked N-acetyl glucosamine transferase, putative similar to O-GlcNAc transferase, Homo sapiens [SP|O15294], Rattus norvegicus [SP|P56558]; contains Pfam profile PF00515: TPR Domain; identical to cDNA GI:18139886" 12 2 12 1 At3g04290 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile: lipase/acylhydrolase with GDSL-like motif" 12 2 12 2 At3g04450 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 2 12 3 At3g04510 hypothetical protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 12 2 12 4 At3g04640 "glycine-rich protein predicted proteins, Arabidopsis thaliana" 12 2 12 5 At3g04700 expressed protein 12 2 12 6 3xSSC 3xSSC 12 2 12 7 At3g07230 "wound-responsive protein-related similar to wound-induced basic protein SP:Q09020 [Phaseolus vulgaris] (Plant Physiol. 101 (4), 1409 (1993))" 12 2 12 8 At3g07410 Ras-related GTP-binding family protein contains Pfam profile: PF00071 Ras family 12 2 12 9 At3g07460 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 12 2 12 10 At3g07570 "membrane protein, putative similar to membrane protein SDR2 (GI:1747306) [Mus musculus]" 12 2 12 11 At3g07630 "prephenate dehydratase family protein similar to P-protein: chorismate mutase, prephenate dehydratase GB:P43900 [Haemophilus influenzae]" 12 2 12 12 At3g07770 "heat shock protein-related strong similarity to heat-shock protein [Secale cereale] GI:556673; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 12 2 12 13 At3g07820 polygalacturonase 3 (PGA3) / pectinase identical to polygalacturonase [Arabidopsis thaliana] GI:3152948 12 2 12 14 3xSSC 3xSSC 12 2 12 15 At3g10845 RNA recognition motif (RRM)-containing protein similar to SP|P42731 Polyadenylate-binding protein 2 (Poly(A) binding protein 2) (PABP 2) {Arabidopsis thaliana}; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain 12 2 12 16 At3g10970 haloacid dehalogenase-like hydrolase family protein low similarity to genetic modifier [Zea mays] GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 12 2 12 17 At3g11000 expressed protein 12 2 12 18 At3g11200 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 12 2 12 19 At3g11240 "arginine-tRNA-protein transferase, putative / arginyltransferase, putative / arginyl-tRNA-protein transferase, putative similar to SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC 2.3.2.8) (R-transferase 1) (Arginyltransferase 1) (Arginyl-tRNA--protein transferase 1) {Arabidopsis thaliana}; contains Pfam profiles PF04377: Arginine-tRNA-protein transferase C terminus, PF04376: Arginine-tRNA-protein transferase N terminus" 12 2 12 20 At3g11402 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 2 12 21 At3g11430 phospholipid/glycerol acyltransferase family protein contains Pfam profile: PF01553 acyltransferase 12 2 12 22 3xSSC 3xSSC 12 2 12 23 At3g13850 LOB domain family protein / lateral organ boundaries domain family protein (LBD22) identical to SP|Q9LRW1 Putative LOB domain protein 22 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 12 2 12 24 At3g14010 hydroxyproline-rich glycoprotein family protein similar to Mrs16p (GI:2737884) [Saccharomyces cerevisiae]; weak similarity to ataxin-2 related protein (GI:1679686) [Homo sapiens] 12 2 12 25 At3g14067 subtilase family protein contains similarity to cucumisin-like serine protease GI:3176874 from [Arabidopsis thaliana] 12 2 13 1 At3g14180 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 12 2 13 2 At3g14225 GDSL-motif lipase/hydrolase family protein contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 12 2 13 3 At3g14360 "lipase class 3 family protein low similarity to Chain A, Lipase Ii From Rhizopus Niveus GI:1942798; contains Pfam profile PF01764: Lipase" 12 2 13 4 At3g14410 "transporter-related low similarity to SP|Q96A29 GDP-fucose transporter 1 {Homo sapiens}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275; contains 10 predicted transmembrane domains;" 12 2 13 5 3xSSC 3xSSC 12 2 13 6 At3g17040 "tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q9FNS4 PsbB mRNA maturation factor Mbb1, chloroplast precursor {Chlamydomonas reinhardtii}; contains Pfam profile: PF00515: TPR Domain" 12 2 13 7 At3g17190 hypothetical protein 12 2 13 8 At3g17230 invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 12 2 13 9 At3g17380 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 12 2 13 10 At3g17440 novel plant SNARE 13 (NPSN13) identical to Novel plant SNARE 13 (AtNPSN13) (SP:Q9LRP1) {Arabidopsis thaliana}; contains Pfam profile: PF00190 11S plant seed storage protein 12 2 13 11 At3g17590 "transcription regulatory protein SNF5, putative (BSH) identical to SNF5 homolog BSH GI:1843628 from [Arabidopsis thaliana]" 12 2 13 12 At3g17611 "rhomboid family protein / zinc finger protein-related contains Pfam profiles PF01694: Rhomboid family, PF00641: Zn-finger in Ran binding protein and others" 12 2 13 13 3xSSC 3xSSC 12 2 13 14 At3g20320 mce-related family protein contains Pfam PF02470: mce related protein 12 2 13 15 At3g20490 expressed protein 12 2 13 16 At3g20550 "forkhead-associated domain-containing protein / FHA domain-containing protein weak similarity to SP|Q28147 Nuclear inhibitor of protein phosphatase-1 (NIPP-1) (Protein phosphatase 1, regulatory inhibitor subunit 8) {Bos taurus}; contains Pfam profile PF00498: FHA domain" 12 2 13 17 At3g20720 expressed protein 12 2 13 18 At3g20780 topoisomerase 6 subunit B (TOP6B) nearly identical to topoisomerase 6 subunit B [Arabidopsis thaliana] GI:12331188 12 2 13 19 At3g20930 RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif 12 2 13 20 At3g21000 expressed protein ; expression supported by MPSS 12 2 13 21 3xSSC 3xSSC 12 2 13 22 At3g23790 "AMP-binding protein, putative similar to AMP-binding protein GB:CAA96521 from [Brassica napus] (Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA acyl-CoA synthetase-like protein GI:20799732" 12 2 13 23 At3g23950 F-box family protein contains Pfam:PF00646 F-box domain 12 2 13 24 At3g24010 PHD finger family protein contains Pfam profile: PF00628 PHD-finger 12 2 13 25 At3g24160 expressed protein identical to cDNA putative type 1 membrane protein (PMP)GI:4206764 12 2 14 1 At3g24220 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to GB:CAB10168 from [Lycopersicon esculentum] (J. Exp. Bot. 47, 2111-2112 (1997)); similar to 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris][GI:6715257]" 12 2 14 2 At3g24370 hypothetical protein 12 2 14 3 At3g24450 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 12 2 14 4 3xSSC 3xSSC 12 2 14 5 At3g27240 "cytochrome c1, putative cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) [Solanum tuberosum] SWISS-PROT:P25076" 12 2 14 6 At3g27390 expressed protein 12 2 14 7 At3g27430 "20S proteasome beta subunit B (PBB1) identical to 20S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type;" 12 2 14 8 At3g27610 expressed protein 12 2 14 9 At3g27670 expressed protein 12 2 14 10 At3g27870 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, Homo sapiens SP|O43520, {Arabidopsis thaliana} SP|P98204; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 12 2 14 11 At3g27925 "DegP protease, putative SP:022609; almost identical to DegP protease precursor GB:AF028842 from [Arabidopsis thaliana] (J. Biol. Chem. 273 (12), 7094-7098 (1998))" 12 2 14 12 3xSSC 3xSSC 12 2 14 13 At3g32120 hypothetical protein 12 2 14 14 At3g32904 hypothetical protein 12 2 14 15 At3g32960 hypothetical protein 12 2 14 16 At3g42090 hypothetical protein 12 2 14 17 At3g42150 expressed protein 12 2 14 18 At3g42390 hypothetical protein 12 2 14 19 At3g42450 zinc knuckle (CCHC-type) family protein contains Pfam profile PF00098: Zinc knuckle 12 2 14 20 3xSSC 3xSSC 12 2 14 21 At3g45620 "transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats; similar to PC326 protein (GI:200241) (PIR2:S37694) [Mus musculus];Human (H326) translated mRNA - Homo sapiens, EMBL:HS06631" 12 2 14 22 At3g45780 "protein kinase / nonphototropic hypocotyl protein 1 (NPH1) / phototropin identical to SP|O48963 Nonphototropic hypocotyl protein 1 (EC 2.7.1.37) (Phototropin) {Arabidopsis thaliana}, cDNA nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains Pfam profiles PF00069:Protein kinase domain and PF00785:PAC motif" 12 2 14 23 At3g45840 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 2 14 24 At3g46020 "RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis}; SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 12 2 14 25 At3g46080 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 12 2 15 1 At3g46270 receptor protein kinase-related contains weak similarity to light repressible receptor protein kinase (GI:1321686) [Arabidopsis thaliana] 12 2 15 2 At3g46330 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 2 15 3 3xSSC 3xSSC 12 2 15 4 At3g49180 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); GTP-binding protein beta chain homolog, Nicotiana tabacum, PIR:T16970" 12 2 15 5 At3g49340 "cysteine proteinase, putative contains PS00640: Eukaryotic thiol (cysteine) proteases asparagine active site; similar to cysteine proteinase GI:535454 from [Alnus glutinosam]" 12 2 15 6 At3g49400 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); low similarity (47%) to Agamous-like MADS box protein AGL5 (SP:P29385) {Arabidopsis thaliana} 12 2 15 7 At3g49580 expressed protein 12 2 15 8 At3g49640 nitrogen regulation family protein similar to NITROGEN REGULATION PROTEIN NIFR3 (SP:Q08111) [Rhodobacter capsulatus]; contains Pfam domain PF01207: Dihydrouridine synthase (Dus) 12 2 15 9 At3g49820 hypothetical protein 12 2 15 10 At3g49880 glycosyl hydrolase family protein 43 contains similarity to xylanase GI:2645416 from [Caldicellulosiruptor saccharolyticus] 12 2 15 11 3xSSC 3xSSC 12 2 15 12 At3g52640 nicastrin-related contains weak similarity to Nicastrin precursor (Swiss-Prot:Q92542) [Homo sapiens] 12 2 15 13 At3g52780 purple acid phosphatase (PAP20) identical to purple acid phosphatase GI:20257491 from [Arabidopsis thaliana] 12 2 15 14 At3g52840 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor GI:3869280 from [Carica papaya]" 12 2 15 15 At3g52980 "RNA recognition motif (RRM)-containing protein predicted proteins, Arabidopsis thaliana" 12 2 15 16 At3g53040 "late embryogenesis abundant protein, putative / LEA protein, putative similar to LEA protein in group 3 [Arabidopsis thaliana] GI:1526424; contains Pfam profile PF02987: Late embryogenesis abundant protein" 12 2 15 17 At3g53220 thioredoxin family protein low similarity to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca mulatta}; contains Pfam profile: PF00085 Thioredoxin 12 2 15 18 At3g53260 phenylalanine ammonia-lyase 2 (PAL2) nearly identical to SP|P45724 12 2 15 19 3xSSC 3xSSC 12 2 15 20 At3g55890 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 12 2 15 21 At3g56070 "peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Catharanthus roseus] SWISS-PROT:Q39613" 12 2 15 22 At3g56130 biotin/lipoyl attachment domain-containing protein low similarity to SP|Q06881 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.}; contains Pfam profile PF00364: Biotin-requiring enzyme 12 2 15 23 At3g56300 tRNA synthetase class I (C) family protein similar to cysteinyl-tRNA synthetase [Methanococcus maripaludis] GI:6599476; contains Pfam profile PF01406: tRNA synthetases class I (C) 12 2 15 24 At3g56350 "superoxide dismutase [Mn], putative / manganese superoxide dismutase, putative similar to manganese superoxide dismutase (MSD1) [Arabidopsis thaliana] gi|3273751|gb|AAC24832" 12 2 15 25 At3g56530 no apical meristem (NAM) protein-related contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana} 12 2 16 1 At3g56590 hydroxyproline-rich glycoprotein family protein 12 2 16 2 3xSSC 3xSSC 12 2 16 3 At3g59460 hypothetical protein putative proteins - Arabidopsis thaliana 12 2 16 4 At3g59650 mitochondrial ribosomal protein L51/S25/CI-B8 family protein low similarity to mitochondrial ribosomal protein bMRP36a [Mus musculus] GI:13559406; contains Pfam profile PF05047: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 12 2 16 5 At3g59690 calmodulin-binding family protein similar to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 12 2 16 6 At3g59850 "polygalacturonase, putative / pectinase, putative similar to SP|P48979 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus persica}; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 12 2 16 7 At3g59900 "expressed protein hypothetical protein At2g44080 - Arabidopsis thaliana, EMBL:AC004005" 12 2 16 8 At3g60060 "hypothetical protein male sterility protein 2 - Brassica napus, PIR:T08096" 12 2 16 9 At3g60120 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; similar to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 12 2 16 10 3xSSC 3xSSC 12 2 16 11 At3g62890 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 2 16 12 At3g63070 "PWWP domain-containing protein putative transcription factor HUA2, Arabidopsis thaliana, EMBL:AF116556" 12 2 16 13 At3g63130 RAN GTPase activating protein 1 (RanGAP1) contains Pfam PF00560: Leucine Rich Repeat domains; identical to RAN GTPase activating protein 1 (GI:6708466)[Arabidopsis thaliana] 12 2 16 14 At3g63260 "protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 12 2 16 15 At3g63300 expressed protein 12 2 16 16 At3g63440 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase, Zea mays, EMBL:ZMY18377 [gi:3882018] [gi:3441978]" 12 2 16 17 At3g63490 "ribosomal protein L1 family protein ribosomal protein L1, S.oleracea, EMBL:SORPL1" 12 2 16 18 3xSSC 3xSSC 12 2 16 19 At4g02390 poly (ADP-ribose) polymerase / NAD(+) ADP-ribosyltransferase / poly[ADP-ribose] synthetase (APP) identical to SP|Q11207 Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP- ribosyltransferase) (Poly[ADP-ribose] synthetase) {Arabidopsis thaliana} 12 2 16 20 At4g02540 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 2 16 21 At4g02580 "NADH-ubiquinone oxidoreductase 24 kDa subunit, putative similar to NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Polypeptide II) (Swiss-Prot:P04394) [Bos taurus]" 12 2 16 22 At4g02730 transducin family protein / WD-40 repeat family protein similar to C. elegans putative WD-repeat protein C14B1.4 (SP:Q17963) 12 2 16 23 At4g02790 "GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function" 12 2 16 24 At4g02950 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 2 16 25 At4g03020 "transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to L. erythrorhizon LEC14B, GenBank accession number Q40153" 12 2 17 1 3xSSC 3xSSC 12 2 17 2 At4g07530 hypothetical protein 12 2 17 3 At4g08013 hypothetical protein low similarity to SCARECROW [Zea mays] GI:10178637 12 2 17 4 At4g08111 hypothetical protein 12 2 17 5 At4g08260 "protein phosphatase 2C, putative / PP2C, putative partial similarity to protein phosphatase 2C - Medicago sativa, PID:e305311" 12 2 17 6 At4g08300 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 12 2 17 7 At4g08470 "mitogen-activated protein kinase, putative similar to mitogen-activated protein kinase [Arabidopsis thaliana] gi|1255448|dbj|BAA09057; contains Pfam PF00069: Protein kinase domain" 12 2 17 8 At4g08540 expressed protein 12 2 17 9 3xSSC 3xSSC 12 2 17 10 At4g11410 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 12 2 17 11 At4g11610 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 12 2 17 12 At4g11670 expressed protein contains Pfam PF05664: Protein of unknown function (DUF810) 12 2 17 13 At4g11830 phospholipase D gamma 2 / PLD gamma 2 (PLDGAMMA2) identical to SP|Q9T051 Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD gamma 2) [Arabidopsis thaliana] 12 2 17 14 At4g11890 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 17 15 At4g12030 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 12 2 17 16 At4g12090 cornichon family protein contains Pfam profile: PF03311 cornichon protein 12 2 17 17 3xSSC 3xSSC 12 2 17 18 At4g14710 "iron-deficiency-responsive protein, putative strong similarity to iron-deficiency induced gene [Hordeum vulgare] GI:14522834; contains Pfam profile PF03079: ARD/ARD' family" 12 2 17 19 At4g14830 expressed protein 12 2 17 20 At4g14890 "ferredoxin family protein similar to SP|P00252 Ferredoxin I from Nostoc muscorum, SP|P00248 Ferredoxin from Mastigocladus laminosus, SP|P00244 Ferredoxin I from Aphanizomenon flos-aquae; contains Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding domain" 12 2 17 21 At4g15020 expressed protein contains Pfam profile PF04937: Protein of unknown function (DUF 659) 12 2 17 22 At4g15060 F-box protein-related contains weak similarity to F-box domain Pfam:PF00646 12 2 17 23 At4g15210 "beta-amylase (BMY1) / 1,4-alpha-D-glucan maltohydrolase identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) SP:P25853 [Arabidopsis thaliana]" 12 2 17 24 At4g15250 zinc finger (B-box type) family protein 12 2 17 25 3xSSC 3xSSC 12 2 18 1 At4g17770 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 12 2 18 2 At4g17940 expressed protein 12 2 18 3 At4g18000 hypothetical protein 12 2 18 4 At4g18140 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 12 2 18 5 At4g18200 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 12 2 18 6 At4g18350 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative neoxanthin cleavage enzyme, Lycopersicon esculentum, PATCHX:E325797; and viviparous-14, Zea mays, PATCHX:G2232017; similar to 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris][GI:6715257]" 12 2 18 7 At4g18375 KH domain-containing protein contains similarity to RNA-binding KH-domains PF:00013 12 2 18 8 3xSSC 3xSSC 12 2 18 9 At4g21215 expressed protein 12 2 18 10 At4g21366 S-locus protein kinase-related similar to S locus receptor kinase (SRK) GI:13620929 from [Arabidopsis lyrata] 12 2 18 11 At4g21430 "transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain, PF02373: jmjC domain" 12 2 18 12 At4g21560 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 12 2 18 13 At4g21610 "zinc finger protein, putative similar to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660" 12 2 18 14 At4g21790 transmembrane protein-related (TOM1) contains some similarity to transmembrane protein TOM3 GI:15425641 from [Arabidopsis thaliana]; identical to cDNA TOM1 GI:9967414 12 2 18 15 At4g21850 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 12 2 18 16 3xSSC 3xSSC 12 2 18 17 At4g24440 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) identical to transcription initiation factor IIA gamma chain SP:Q39236 from [Arabidopsis thaliana]; 12 2 18 18 At4g24570 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 12 2 18 19 At4g24630 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 12 2 18 20 At4g24770 "31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative similar to SP|Q04836 31 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) {Arabidopsis thaliana}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 12 2 18 21 At4g24820 "26S proteasome regulatory subunit, putative (RPN7) contains similarity to ubiquitin activating enzyme GI:3647283 from [Lycopersicon esculentum]" 12 2 18 22 At4g25000 "alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative similar to alpha-amylase from Vigna mungo SP|P17859, Ipomoea nil GI:21670851; contains Pfam profile PF00128: Alpha amylase, catalytic domain" 12 2 18 23 At4g25050 "acyl carrier family protein / ACP family protein similar to Acyl carrier protein, chloroplast precursor from {Spinacia oleracea} SP|P23235, {Casuarina glauca} SP|P93092; contains InterPro accession IPR003881: Isochorismatase" 12 2 18 24 3xSSC 3xSSC 12 2 18 25 At4g27660 expressed protein ; expression supported by MPSS 12 2 19 1 At4g27820 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 12 2 19 2 At4g27880 seven in absentia (SINA) family protein similar to siah-1A protein [Mus musculus] GI:297035; contains Pfam profile PF03145: Seven in absentia protein family 12 2 19 3 At4g28025 expressed protein 12 2 19 4 At4g28080 expressed protein 12 2 19 5 At4g28230 expressed protein 12 2 19 6 At4g28290 expressed protein 12 2 19 7 3xSSC 3xSSC 12 2 19 8 At4g30950 "omega-6 fatty acid desaturase, chloroplast (FAD6) (FADC) identical to GI:493068" 12 2 19 9 At4g31070 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 12 2 19 10 At4g31120 Skb1 methyltransferase family protein contains Pfam profile: PF05185 Skb1 methyltransferase 12 2 19 11 At4g31280 hypothetical protein 12 2 19 12 At4g31340 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, nonmuscle type A (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo sapiens]" 12 2 19 13 At4g31500 cytochrome P450 83B1 (CYP83B1) Identical to Cytochrome P450 (SP:O65782 )[Arabidopsis thaliana] 12 2 19 14 At4g31550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 12 2 19 15 3xSSC 3xSSC 12 2 19 16 At4g34110 "polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyadenylate-binding protein - Triticum aestivum (common wheat),PIR:T06979" 12 2 19 17 At4g34240 "aldehyde dehydrogenase (ALDH3) similar to aldehyde dehydrogenase [Arabidopsis thaliana] gi|17065876|emb|CAC84903; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein; identical to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875, aldehyde dehydrogenase [Arabidopsis thaliana] GI:17065876" 12 2 19 18 At4g34265 expressed protein 12 2 19 19 At4g34420 expressed protein ; expression supported by MPSS 12 2 19 20 At4g34470 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At12), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 from [Arabidopsis thaliana]" 12 2 19 21 At4g34640 "farnesyl-diphosphate farnesyltransferase 1 / squalene synthase 1 (SQS1) identical to SP|P53799 Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21) (Squalene synthetase) (SQS) (SS) (FPP:FPP farnesyltransferase) {Arabidopsis thaliana}; non-consensus GC donor splice site at exon 3, squalene synthase 2 (SQS2), Arabidopsis thaliana" 12 2 19 22 At4g34700 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 12 2 19 23 AT5G57480 PC-1 B01 12 2 19 24 3XSSC PC-1 B13 12 2 19 25 AT1G29930 PC-1 F01 12 2 20 1 3XSSC PC-1 F13 12 2 20 2 AT3G44150 PC-1 J01 12 2 20 3 3XSSC PC-1 J13 12 2 20 4 AT4G00810 PC-1 N01 12 2 20 5 3XSSC PC-1 N13 12 2 20 6 3xSSC 3xSSC 12 2 20 7 At4g37390 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 12 2 20 8 At4g37560 "formamidase, putative / formamide amidohydrolase, putative similar to SP|Q50228 Formamidase (EC 3.5.1.49) (Formamide amidohydrolase) {Methylophilus methylotrophus}; contains Pfam profile PF03069: Acetamidase/Formamidase family" 12 2 20 9 At4g37630 "cyclin family protein similar to SP|P42753 Cyclin delta-3 {Arabidopsis thaliana}; contains Pfam profile PF00134: Cyclin, N-terminal domain" 12 2 20 10 At4g37780 myb family transcription factor (MYB87) identical to AtMYB87 R2R3-MYB transcription factor GI:2832559 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 myb-like DNA-binding domain 12 2 20 11 At4g37840 "hexokinase, putative similar to hexokinase 1 [Spinacia oleracea] Swiss-Prot:Q9SEK3" 12 2 20 12 At4g38030 hypothetical protein 12 2 20 13 At4g38070 bHLH family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; PMID: 12679534; putative bHLH131 transcription factor 12 2 20 14 3xSSC 3xSSC 12 2 20 15 At5g01520 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 12 2 20 16 At5g01670 "aldose reductase, putative similar to aldose reductase [Hordeum vulgare][GI:728592], aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944]" 12 2 20 17 At5g01720 F-box family protein (FBL3) contains similarity to leucine-rich repeats containing F-box protein FBL3 GI:5919219 from [Homo sapiens] 12 2 20 18 At5g01880 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 12 2 20 19 At5g01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5 12 2 20 20 At5g02080 DNA/panthothenate metabolism flavoprotein family protein contains Pfam domain PF04127: DNA / pantothenate metabolism flavoprotein 12 2 20 21 At5g02140 "thaumatin-like protein, putative similar to SP|P50699 Thaumatin-like protein precursor {Arabidopsis thaliana}; contains Pfam profile PF00314: Thaumatin family" 12 2 20 22 3xSSC 3xSSC 12 2 20 23 At5g04940 "SET domain-containing protein (SUVH1) contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH1 (SUVH1) GI:13517742" 12 2 20 24 At5g05090 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 2 20 25 At5g05150 transport protein-related contains 2 WD-40 repeats (PF00400); similar to transport protein Gsa12p (GI:18307769) [Pichia pastoris] 12 2 21 1 At5g05310 expressed protein 12 2 21 2 At5g05360 expressed protein similar to unknown protein (pir||T02500) 12 2 21 3 At5g05510 protein kinase-related low similarity to SP|O60566 Mitotic checkpoint serine/threonine-protein kinase BUB1 beta (EC 2.7.1.-) {Homo sapiens} 12 2 21 4 At5g05550 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 12 2 21 5 3xSSC 3xSSC 12 2 21 6 At5g08250 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 12 2 21 7 At5g08400 "expressed protein predicted proteins, Arabidopsis thaliana and Synechocystis sp." 12 2 21 8 At5g08450 "expressed protein KED, Nicotiana tabacum, EMBL:AB009883" 12 2 21 9 At5g08570 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Glycine max] SWISS-PROT:Q42806" 12 2 21 10 At5g08630 DDT domain-containing protein low similarity to SP|Q9NRL2 Bromodomain adjacent to zinc finger domain protein 1A (ATP-utilizing chromatin assembly and remodeling factor 1) (ATP-dependent chromatin remodelling protein) (Williams syndrome transcription factor-related chromatin remodeling factor 180) {Homo sapiens}; contains Pfam profile PF02791: DDT domain 12 2 21 11 At5g09230 "transcriptional regulator Sir2 family protein contains Pfam domain PF02146: transcriptional regulator, Sir2 family;" 12 2 21 12 At5g09250 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 12 2 21 13 3xSSC 3xSSC 12 2 21 14 At5g12040 "carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 12 2 21 15 At5g12210 "geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative similar to rab geranylgeranyl transferase GB:CAA69383 GI:1552549 from [Homo sapiens]" 12 2 21 16 At5g12260 expressed protein 12 2 21 17 At5g12410 THUMP domain-containing protein contains Pfam profile PF02926: THUMP domain 12 2 21 18 At5g12470 expressed protein 12 2 21 19 At5g12990 "CLE40, putative CLAVATA3/ESR-Related 40 (CLE40); similarity to CLAVATA3 signature" 12 2 21 20 At5g13060 "armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651" 12 2 21 21 3xSSC 3xSSC 12 2 21 22 At5g15860 expressed protein 12 2 21 23 At5g16020 stress protein-related contains weak similarity to Swiss-Prot:P18899 stress protein (DNA damage-responsive protein 48) (DDRP 48) (YP 75) (Flocculent specific protein) [Saccharomyces cerevisiae] 12 2 21 24 At5g16080 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 12 2 21 25 At5g16260 "RNA recognition motif (RRM)-containing protein similar to Tat-SF1 - Homo sapiens, GI:1667611; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 12 2 22 1 At5g16290 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 12 2 22 2 At5g16440 isopentenyl-diphosphate delta-isomerase I / isopentenyl diphosphate:dimethylallyl diphosphate isomerase I (IPP1) identical to SP|Q38929 12 2 22 3 At5g16500 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 22 4 3xSSC 3xSSC 12 2 22 5 At5g19120 "expressed protein low similarity to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741, SP|P13917 Basic 7S globulin precursor {Glycine max}" 12 2 22 6 At5g19280 kinase associated protein phosphatase (KAPP) identical to Kinase associated protein phosphatase (SP:P46014) [Arabidopsis thaliana]; contains Pfam PF00481: Protein phosphatase 2C domain; contains Pfam PF00498: FHA domain 12 2 22 7 At5g19330 "armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651" 12 2 22 8 At5g19480 expressed protein 12 2 22 9 At5g19540 expressed protein 12 2 22 10 At5g19720 "tRNA synthetase class I (E and Q) family protein similar to tRNA-glutamine synthetase [Lupinus luteus] GI:2995455; contains Pfam profile PF03950: tRNA synthetases class I (E and Q), anti-codon binding domain" 12 2 22 11 At5g19780 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} 12 2 22 12 3xSSC 3xSSC 12 2 22 13 At5g23160 expressed protein ; expression supported by MPSS 12 2 22 14 At5g23300 "dihydroorotate dehydrogenase, mitochondrial / dihydroorotate oxidase / DHOdehase (PYRD) nearly identical to SP|P32746 Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) {Arabidopsis thaliana}; identical to cDNA pyrD mRNA for dihydroorotate dehydrogenase GI:16448" 12 2 22 15 At5g23360 "GRAM domain-containing protein / ABA-responsive protein-related contains similarity to ABA-responsive protein in barley (GI:4103635) [Hordeum vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam PF02893: GRAM domain]" 12 2 22 16 At5g23480 expressed protein 12 2 22 17 At5g23540 "26S proteasome regulatory subunit, putative similar to 26S proteasome-associated pad1 homolog [Homo sapiens] GI:1923256, 26S proteasome, non-ATPase subunit [Mus musculus] GI:2505940; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 12 2 22 18 At5g23730 "transducin family protein / WD-40 repeat family protein contains similarity to photomorphogenesis repressor protein; contains Pfam PF00400: WD domain, G-beta repeat (5 copies)" 12 2 22 19 At5g23770 agenet domain-containing protein contains Pfam PF05641: Agenet domain 12 2 22 20 3xSSC 3xSSC 12 2 22 21 At5g26670 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 12 2 22 22 At5g26780 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative strong similarity to SP|P50433 Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) {Solanum tuberosum}; contains Pfam profile PF00464: serine hydroxymethyltransferase" 12 2 22 23 At5g26810 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 12 2 22 24 At5g26990 "drought-responsive family protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 12 2 22 25 At5g27060 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 12 2 23 1 At5g27260 hypothetical protein 12 2 23 2 At5g27320 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 12 2 23 3 3xSSC 3xSSC 12 2 23 4 At5g35430 expressed protein 12 2 23 5 At5g35603 hypothetical protein 12 2 23 6 At5g35630 "glutamine synthetase (GS2) identical to glutamine synthetase, chloroplast precursor (glutamate-- ammonia ligase, GS2) [Arabidopsis thaliana] SWISS-PROT:Q43127" 12 2 23 7 At5g35753 expressed protein 12 2 23 8 At5g35805 hypothetical protein 12 2 23 9 At5g35980 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 23 10 At5g36035 hypothetical protein 12 2 23 11 3xSSC 3xSSC 12 2 23 12 At5g39300 "expansin, putative (EXP25) similar to alpha-expansin 4 precursor GI:16923355 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 12 2 23 13 At5g39480 F-box family protein contains Pfam:PF00646 F-box domain ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 12 2 23 14 At5g39540 "hypothetical protein predicted proteins, Arabidopsis thaliana" 12 2 23 15 At5g39720 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to SP|P54121 AIG2 protein {Arabidopsis thaliana} 12 2 23 16 At5g39785 expressed protein 12 2 23 17 At5g39940 expressed protein 12 2 23 18 At5g40000 "AAA-type ATPase family protein BCS1 nuclear gene encoding mitochondrial protein - Homo sapiens, EMBL:AF026849 contains Pfam profile: ATPase family PF00004" 12 2 23 19 3xSSC 3xSSC 12 2 23 20 At5g42825 expressed protein 12 2 23 21 At5g42940 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 12 2 23 22 At5g42970 "COP9 signalosome complex subunit 4 / CSN complex subunit 4 (CSN4) (COP8) (FUS4) FUSCA4, COP8, CSN4; identical to CSN complex subunit 4 [Arabidopsis thaliana] GI:18056659, COP8 [Arabidopsis thaliana] GI:5802627; contains Pfam profile PF01399: PCI domain; identical to cDNA CSN complex subunit 4 (CSN4) GI:18056658" 12 2 23 23 At5g43150 expressed protein 12 2 23 24 At5g43190 F-box family protein (FBX6) contains similarity to unusual floral organs (UFO) GI:4376159 from [Arabidopsis thaliana] 12 2 23 25 At5g43370 inorganic phosphate transporter (PHT2) identical to inorganic phosphate transporter [Arabidopsis thaliana] GI:2780348 12 2 24 1 At5g43410 "ethylene-responsive factor, putative contains AP2 DNA-binding domain" 12 2 24 2 3xSSC 3xSSC 12 2 24 3 At5g46050 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 12 2 24 4 At5g46160 ribosomal protein L14 family protein / huellenlos paralog (HLP) contains Pfam profile PF00238: Ribosomal protein L14p/L23e; identical to cDNA HUELLENLOS PARALOG (HLP) nuclear gene for mitochondrial product GU:18140859 12 2 24 5 At5g46220 expressed protein contains Pfam profile PF04765: Protein of unknown function (DUF616) 12 2 24 6 At5g46370 "outward rectifying potassium channel, putative (KCO2) identical to KCO2 protein [Arabidopsis thaliana] gi|6686780|emb|CAB64717; similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 12 2 24 7 At5g46420 "16S rRNA processing protein RimM family contains weak similarity to Swiss-Prot:O74933 UDP-N-acetylglucosamine pyrophosphorylase [Candida albicans]; contains Pfam profiles PF01782: 16S rRNA processing protein RimM, PF05239: PRC-barrel domain" 12 2 24 8 At5g46580 "pentatricopeptide (PPR) repeat-containing protein contains similarity to 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus] GI:9755886; contains Pfam profile PF01535: PPR repeat" 12 2 24 9 At5g46630 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 12 2 24 10 3xSSC 3xSSC 12 2 24 11 At5g49300 zinc finger (GATA type) family protein similar to unknown protein (gb|AAF63824.1) 12 2 24 12 At5g49470 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 12 2 24 13 At5g49525 expressed protein 12 2 24 14 At5g49665 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 12 2 24 15 At5g49710 expressed protein similar to unknown protein (pir||T05575) 12 2 24 16 At5g49880 mitotic checkpoint family protein similar to mitotic checkpoint protein isoform MAD1a [Homo sapiens] GI:4580767; contains Pfam profile PF05557: Mitotic checkpoint protein 12 2 24 17 At5g49940 nitrogen fixation NifU-like family protein similar to Nitrogen fixation protein nifU (SP:Q43885) {Anabaena azollae}; contains Pfam profile: PF01106 NifU-like domain 12 2 24 18 3xSSC 3xSSC 12 2 24 19 At5g52730 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 12 2 24 20 At5g52910 timeless family protein contains Pfam domains PF05029: Timeless protein C terminal region and PF04821: Timeless protein 12 2 24 21 At5g52965 hypothetical protein 12 2 24 22 At5g53100 "oxidoreductase, putative similar to forever young oxidoreductase (FEY3) GI:12004621 from [Arabidopsis thaliana]" 12 2 24 23 At5g53160 expressed protein similar to unknown protein (pir||T02893) 12 2 24 24 At5g53330 expressed protein 12 2 24 25 At5g53390 expressed protein 12 2 25 1 3xSSC 3xSSC 12 2 25 2 At5g56110 myb family transcription factor contains PFAM profile: Myb DNA binding domain PF00249 12 2 25 3 At5g56270 WRKY family transcription factor 12 2 25 4 At5g56325 hypothetical protein 12 2 25 5 At5g56490 "FAD-binding domain-containing protein strong similarity to At1g32300, At2g46740, At2g46750, At2g46760; contains PF01565: FAD binding domain" 12 2 25 6 At5g56550 expressed protein 12 2 25 7 At5g56730 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 12 2 25 8 At5g56790 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 2 25 9 3xSSC 3xSSC 12 2 25 10 At5g59380 methyl-CpG-binding domain-containing protein similar to testis specific methyl-CpG binding protein MBD2 [Homo sapiens] GI:3800801; contains Pfam profile PF01429: Methyl-CpG binding domain 12 2 25 11 At5g59510 expressed protein 12 2 25 12 At5g59570 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 2 25 13 At5g59760 hypothetical protein 12 2 25 14 At5g59810 "subtilase family protein subtilisin-like protease AIR3, Arabidopsis thaliana, EMBL:AF098632" 12 2 25 15 At5g59930 "DC1 domain-containing protein / UV-B light-insensitive protein, putative similar to ULI3 (UV-B light insensitive) [Arabidopsis thaliana] GI:17225050; contains Pfam profile PF03107: DC1 domain" 12 2 25 16 At5g59970 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 12 2 25 17 3xSSC 3xSSC 12 2 25 18 At5g62720 "integral membrane HPP family protein contains Pfam domain, PF04982: HPP family" 12 2 25 19 At5g62880 "Rac-like GTP-binding protein (ARAC10) identical to rac GTP binding protein Arac10 [Arabidopsis thaliana] GI:3702964, rac-like GTP binding protein Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam profile: PF00071 Ras family" 12 2 25 20 At5g62920 two-component responsive regulator / response regulator 6 (ARR6) identical to response regulator 6 [Arabidopsis thaliana] GI:3953601 12 2 25 21 At5g63080 transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain PF02373: jmjC domain 12 2 25 22 At5g63120 "ethylene-responsive DEAD box RNA helicase, putative (RH30) strong similarity to ethylene-responsive RNA helicase [Lycopersicon esculentum] GI:5669638; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 12 2 25 23 At5g63280 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 2 25 24 At5g63340 expressed protein 12 2 25 25 3xSSC 3xSSC 12 2 26 1 At5g65950 expressed protein 12 2 26 2 At5g66050 expressed protein 12 2 26 3 At5g66060 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 12 2 26 4 At5g66220 "chalcone-flavanone isomerase, putative / chalcone isomerase, putative (CHI) similar to SP|P41088" 12 2 26 5 At5g66250 kinectin-related contains weak similarity to kinectin (GI:3766232) [Vulpes vulpes] 12 2 26 6 At5g66370 hypothetical protein similar to unknown protein (emb CAB62624.1) 12 2 26 7 At5g66430 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 12 2 26 8 3xSSC 3xSSC 12 2 26 9 3xSSC 3xSSC 12 2 26 10 3xSSC 3xSSC 12 2 26 11 3xSSC 3xSSC 12 2 26 12 3xSSC 3xSSC 12 2 26 13 3xSSC 3xSSC 12 2 26 14 3xSSC 3xSSC 12 2 26 15 3xSSC 3xSSC 12 2 26 16 3xSSC 3xSSC 12 2 26 17 At3g45620 "transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats; similar to PC326 protein (GI:200241) (PIR2:S37694) [Mus musculus];Human (H326) translated mRNA - Homo sapiens, EMBL:HS06631" 12 2 26 18 At3g45780 "protein kinase / nonphototropic hypocotyl protein 1 (NPH1) / phototropin identical to SP|O48963 Nonphototropic hypocotyl protein 1 (EC 2.7.1.37) (Phototropin) {Arabidopsis thaliana}, cDNA nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains Pfam profiles PF00069:Protein kinase domain and PF00785:PAC motif" 12 2 26 19 At3g45840 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 2 26 20 At3g46020 "RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis}; SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 12 2 26 21 At3g46080 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 12 2 26 22 At3g46270 receptor protein kinase-related contains weak similarity to light repressible receptor protein kinase (GI:1321686) [Arabidopsis thaliana] 12 2 26 23 At3g46330 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 2 26 24 Blank Blank 12 2 26 25 Blank Blank 12 3 1 1 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 12 3 1 2 atc06 Randomly generated negative control 12 3 1 3 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 12 3 1 4 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 3 1 5 Alien2 Control: Stratagene Spotreport Alien Oligo 12 3 1 6 Alien8 Control: Stratagene Spotreport Alien Oligo 12 3 1 7 atc04 Randomly generated negative control 12 3 1 8 atc10 Randomly generated negative control 12 3 1 9 At1g01100 60S acidic ribosomal protein P1 (RPP1A) similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from [Arabidopsis thaliana] 12 3 1 10 At1g01140 CBL-interacting protein kinase 9 (CIPK9) identical to CBL-interacting protein kinase 9 [Arabidopsis thaliana] gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 12 3 1 11 At1g01310 allergen V5/Tpx-1-related family protein similar to pathogenesis related protein-1 GB:AAC25629 GI:3290004 from [Zea mays]; contains Pfam profile PF00188: SCP-like extracellular protein 12 3 1 12 At1g01380 myb family transcription factor similar to myb homolog (CPC) GI:2346966 from [Arabidopsis thaliana] 12 3 1 13 At1g01550 expressed protein 12 3 1 14 At1g01610 phospholipid/glycerol acyltransferase family protein similar to unknown protein GI:3335359 from [Arabidopsis thaliana] 12 3 1 15 At1g01770 expressed protein 12 3 1 16 At1g01830 "armadillo/beta-catenin repeat family protein armadillo/beta-catenin-like repeats, Pfam:PF00514" 12 3 1 17 At1g04420 "aldo/keto reductase family protein Similar to SP|Q46933 Tas protein {Escherichia coli}, Babesia aldo-keto reductase SP|P40690; contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 12 3 1 18 At1g04480 60S ribosomal protein L23 (RPL23A) identical to GB:AAB80655 12 3 1 19 At1g04620 "coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family contains Pfam PF04432: Coenzyme F420 hydrogenase/dehydrogenase, beta domain; similar to Coenzyme F420 hydrogenase beta subunit (SP:Q00391) {Methanobacterium thermoautotrophicum}" 12 3 1 20 At1g04660 glycine-rich protein 12 3 1 21 At1g04860 ubiquitin-specific protease 2 (UBP2) identical to GI:11993463 12 3 1 22 At1g04900 "expressed protein contains Pfam PF02636: Uncharacterized ACR, COG1565" 12 3 1 23 At1g05055 "basic transcription factor 2, 44kD subunit-related contains weak similarity to Swiss-Prot:Q13888 TFIIH basal transcription factor complex p44 subunit (Basic transcription factor 2 44 kDa subunit, BTF2-p44, General transcription factor IIH polypeptide 2) [Homo sapiens]" 12 3 1 24 At1g05090 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 12 3 1 25 At1g07700 thioredoxin family protein low similarity to thioredoxin [Gallus gallus] GI:212766; contains Pfam profile: PF00085 Thioredoxin 12 3 2 1 At1g07730 disease resistance-responsive family protein contains Pfam PF03018: Plant disease resistance response protein 12 3 2 2 At1g07840 leucine zipper factor-related similar to charged amino acid rich leucine zipper factor-1 (GI:12061569) {Mus musculus} 12 3 2 3 At1g07890 "L-ascorbate peroxidase 1, cytosolic (APX1) identical to SP|Q05431 L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP) {Arabidopsis thaliana}, L-ascorbate peroxidase [Arabidopsis thaliana] gi|16173|emb|CAA42168; strong similarity to cytosolic ascorbate peroxidase [Spinacia oleracea] gi|1384110|dbj|BAA12890" 12 3 2 4 At1g08010 zinc finger (GATA type) family protein similar to PIR:T05288 from [Arabidopsis thaliana] 12 3 2 5 At1g08060 MOM1 identical to MOM1 (mutation in a 'Morpheus molecule') [Arabidopsis thaliana] gi|8132770|gb|AAF73381.1| 12 3 2 6 At1g08190 "vacuolar assembly protein, putative (VPS41) 99.8% identical to Vacuolar assembly protein VPS41 homolog (SP:P93043) [Arabidopsis thaliana]; similar to vacuolar assembly protein vps41 GI:1835787 from [Lycopersicon esculentum]" 12 3 2 7 At1g08260 "DNA-directed DNA polymerase epsilon catalytic subunit, putative similar to SP|Q07864 DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A) {Homo sapiens}; contains Pfam profiles: PF03175 DNA polymerase type B, organellar and viral, PF00136 DNA polymerase family B, PF03104 DNA polymerase family B, exonuclease domain" 12 3 2 8 At1g10820 expressed protein similar to hypothetical protein GB:AAB71979 12 3 2 9 At1g10870 ARF GTPase-activating domain-containing protein 12 3 2 10 At1g11050 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 3 2 11 At1g11110 expressed protein 12 3 2 12 At1g11270 F-box family protein contains F-box domain Pfam:PF00646 12 3 2 13 At1g11330 "S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding)" 12 3 2 14 At1g11470 hypothetical protein 12 3 2 15 At1g11520 pliceosome associated protein-related contains similarity to spliceosome associated protein SAP 145 GI:1173904 from [Homo sapiens] 12 3 2 16 At1g14290 "acid phosphatase, putative similar to acid phosphatase [Lupinus albus] GI:5360721; contains Pfam profile PF01598 sterol desaturase" 12 3 2 17 At1g14345 expressed protein contains one transmembrane domain 12 3 2 18 At1g14500 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 12 3 2 19 At1g14550 "anionic peroxidase, putative similar to anionic peroxidase GI:170202 from (Nicotiana sylvestris)" 12 3 2 20 At1g14690 "microtubule associated protein (MAP65/ASE1) family protein low similarity to SP|P32380 NUF1 protein (Spindle poly body spacer protein SPC110) {Saccharomyces cerevisiae}, smooth muscle myosin heavy chain [Homo sapiens] GI:4417214; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family)" 12 3 2 21 At1g14750 "cyclin, putative (SDS) identical to cyclin-like protein [Arabidopsis thaliana] GI:20302467; low similarity to SP|P30278 G2/mitotic-specific cyclin 2 (B-like cyclin) (CycMs2 {Medicago sativa}; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 12 3 2 22 At1g14880 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 12 3 2 23 At1g14940 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 12 3 2 24 At1g17620 expressed protein 12 3 2 25 At1g17680 "transcription factor-related low similarity to SP|P33339 Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) Saccharomyces cerevisiae, transcription factor IIIC102 short isoform [Homo sapiens] GI:18481637" 12 3 3 1 At1g17810 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 12 3 3 2 At1g17860 "trypsin and protease inhibitor family protein / Kunitz family protein similar to LeMir (miraculin homolog) GI:2654440 from [Lycopersicon esculentum], tumor-related protein [Nicotiana tabacum] GI:1762933; contains Pfam profile PF00197: Trypsin and protease inhibitor" 12 3 3 3 At1g18040 "cell division protein kinase, putative similar to cell division protein kinase 7 [Homo sapiens] SWISS-PROT:P50613" 12 3 3 4 At1g18100 mother of FT and TF1 protein (MFT) identical to SP|Q9XFK7 MOTHER of FT and TF1 protein {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 12 3 3 5 At1g18300 "MutT/nudix family protein similar to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 12 3 3 6 At1g18350 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK7) mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 12 3 3 7 At1g21240 "wall-associated kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] GI:3549626; expressed in leaves and stems & induced by salicylic acid or INA (PMID:10380805)" 12 3 3 8 At1g21312 "RNA recognition motif (RRM)-containing protein contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain" 12 3 3 9 At1g21460 nodulin MtN3 family protein contains similarity to MTN3 (nodule development protein) GB:Y08726 GI:1619601 from [Medicago truncatula] 12 3 3 10 At1g21530 "AMP-binding protein, putative strong similarity to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 10 AMPBP10 (AMPBP10) GI:20799728" 12 3 3 11 At1g21695 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 3 3 12 At1g21750 "protein disulfide isomerase, putative similar to SP|P29828 Protein disulfide isomerase precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform contains non-consensus GA donor splice site at intron 9" 12 3 3 13 At1g21920 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 12 3 3 14 At1g21980 "1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative strong similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 12 3 3 15 At1g24540 "cytochrome P450, putative similar to GB:AAB87111, similar to ESTs dbj|D41610, gb|T20562 and emb|Z26058" 12 3 3 16 At1g24600 expressed protein 12 3 3 17 At1g25220 anthranilate synthase beta subunit (ASB1) identical to anthranilate synthase beta subunit GI:403434 from [Arabidopsis thaliana] 12 3 3 18 At1g25275 expressed protein 12 3 3 19 At1g25420 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 12 3 3 20 At1g25470 "AP2 domain-containing transcription factor, putative similar to putative AP2 domain transcription factor GI:6553944 from [Arabidopsis thaliana]" 12 3 3 21 At1g26110 expressed protein 12 3 3 22 At1g26170 importin beta-2 subunit family protein similar to Importin9 isoform 1 [Mus musculus] GI:15186756; contains Pfam profile PF03810: Importin-beta N-terminal domain 12 3 3 23 At1g29050 expressed protein similar to hypothetical protein GB:AAB67625 GI:2342727 from [Arabidopsis thaliana] 12 3 3 24 At1g29110 "cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]" 12 3 3 25 At1g29310 "protein transport protein sec61, putative similar to PfSec61 [Plasmodium falciparum] GI:3057044; contains Pfam profile PF00344: eubacterial secY protein" 12 3 4 1 At1g29370 kinase-related similar to putative protein kinase (GI:11125348) [Homo sapiens]; similar to Paired box protein Pax-8 (Swiss-Prot:P47240) [Canis familiaris] 12 3 4 2 At1g29510 "auxin-responsive protein, putative similar to auxin-induced protein 6B (SP:P33083) [Glycine max]" 12 3 4 3 At1g29570 zinc finger protein-related contains similarity to zinc finger proteins (CCCH type) 12 3 4 4 At1g29760 expressed protein 12 3 4 5 At1g29820 expressed protein 12 3 4 6 At1g32670 hypothetical protein 12 3 4 7 At1g32710 cytochrome c oxidase subunit VIb family contains similarity to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] GI:6518353; contains Pfam profile PF02297: Cytochrome oxidase c subunit VIb 12 3 4 8 At1g32910 "transferase family protein low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase Dianthus caryophyllus GI:2239091, benzylalcohol acetyltransferase Clarkia breweri GI:6166336; contains Pfam profile PF02458 transferase family" 12 3 4 9 At1g32970 subtilase family protein similar to subtilase GI:9957714 from [Oryza sativa] 12 3 4 10 At1g33110 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 12 3 4 11 At1g33230 expressed protein 12 3 4 12 At1g33410 expressed protein 12 3 4 13 At1g33470 RNA recognition motif (RRM)-containing protein similar to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 12 3 4 14 At1g42740 hypothetical protein 12 3 4 15 At1g43010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 3 4 16 At1g43560 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin; similar to thioredoxin GI:142153 from [Synechococcus PCC6301] 12 3 4 17 At1g43620 "UDP-glucose:sterol glucosyltransferase, putative similar to UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] GI:2462931; contains Pfam profile: PF03033 glycosyltransferase family 28 N-terminal domain" 12 3 4 18 At1g43777 hypothetical protein 12 3 4 19 At1g43860 expressed protein 12 3 4 20 At1g44085 glycine-rich protein similar to glycine-rich protein GI:18147 from [Chenopodium rubrum] 12 3 4 21 At1g44160 DNAJ chaperone C-terminal domain-containing protein contains Pfam profile PF01556: DnaJ C terminal region 12 3 4 22 At1g49220 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 12 3 4 23 At1g49270 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 12 3 4 24 At1g49475 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 12 3 4 25 At1g49530 geranylgeranyl pyrophosphate synthase (GGPS6) / GGPP synthetase / farnesyltranstransferase identical to gi:2578821; similar to geranyl geranyl pyrophosphate synthase GI:2578822 from [Arabidopsis thaliana] 12 3 5 1 At1g49710 "fucosyltransferase-like protein, putative / FucT2, putative / FucTB, putative (FUT12) identical to Putative fucosyltransferase-like protein (FucTB) (FucT2) (AtFUT12) (Swiss-Prot:Q9FX97) [Arabidopsis thaliana]; similar to glycoprotein 3-alpha-L-fucosyltransferase A (SP:Q9LJK1) [Arabidopsis thaliana]; contains Pfam profile PF00852: Fucosyl transferase" 12 3 5 2 At1g49770 basic helix-loop-helix (bHLH) family protein contains similarity to putative bHLH transcription factor GB:AAC63587 GI:3738090 from [Arabidopsis thaliana] 12 3 5 3 At1g49950 "DNA-binding protein, putative contains similarity to DNA-binding protein PcMYB1 [Petroselinum crispum] gi|2224899|gb|AAB61699" 12 3 5 4 At1g49975 expressed protein 12 3 5 5 At1g52840 hypothetical protein 12 3 5 6 At1g52890 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM (no apical meristem) GB:CAA63101 from [Petunia x hybrida] 12 3 5 7 At1g53050 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 12 3 5 8 At1g53110 expressed protein 12 3 5 9 At1g53270 ABC transporter family protein contains similarity to ABC transporter GI:10280532 from [Homo sapiens] 12 3 5 10 At1g53320 F-box family protein / tubby family protein (TULP7) similar to Tubby related protein 2 (Tubby-like protein 2) (P4-6 protein) (Fragment) (SP:P46686) [Mus musculus]; similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Tubby protein homolog 1. (Swiss-Prot:Q09306) [Caenorhabditis elegans] contains Pfam profile: PF01167: Tub family; contains Pfam PF00646: F-box domain 12 3 5 11 At1g53470 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 12 3 5 12 At1g53530 signal peptidase I family protein contains similarity to SP|P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I 12 3 5 13 At1g56130 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 12 3 5 14 At1g56180 expressed protein 12 3 5 15 At1g56330 GTP-binding protein (SAR1B) identical to GTP-binding protein (SAR1B) [Arabidopsis thaliana] SP:Q01474 12 3 5 16 At1g56400 F-box family protein contains Pfam:PF00646 F-box domain 12 3 5 17 At1g56590 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 12 3 5 18 At1g56660 expressed protein 12 3 5 19 At1g57610 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 12 3 5 20 At1g57670 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 12 3 5 21 At1g61563 rapid alkalinization factor (RALF) family protein contains Pfam domain PF05498: Rapid ALkalinization Factor (RALF) 12 3 5 22 At1g61610 "S-locus lectin protein kinase family protein similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 12 3 5 23 At1g61780 postsynaptic protein-related similar to postsynaptic protein CRIPT GI:3098551 from [Rattus norvegicus] 12 3 5 24 At1g61820 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 12 3 5 25 At1g62010 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 12 3 6 1 At1g62060 expressed protein 12 3 6 2 At1g62250 expressed protein 12 3 6 3 At1g62305 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 12 3 6 4 At1g65030 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to PAK/PLC-interacting protein 1 (GI:14211689) [Homo sapiens] 12 3 6 5 At1g65060 4-coumarate--CoA ligase 3 / 4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777 4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3) (4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana} 12 3 6 6 At1g65210 hypothetical protein 12 3 6 7 At1g65270 expressed protein 12 3 6 8 At1g65390 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 12 3 6 9 At1g65450 "transferase family protein low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase Dianthus caryophyllus GI:3288180, GI:2239091; contains Pfam profile PF02458 transferase family" 12 3 6 10 At1g65660 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 3 6 11 At1g65720 expressed protein 12 3 6 12 At1g68460 adenylate isopentenyltransferase 1 / cytokinin synthase (IPT1) identical to adenylate isopentenyltransferase (IPT1) [Arabidopsis thaliana] GI:14279054 12 3 6 13 At1g68520 zinc finger (B-box type) family protein contains Pfam profile: PF00643 B-box zinc finger 12 3 6 14 At1g68650 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 12 3 6 15 At1g68720 cytidine/deoxycytidylate deaminase family protein contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 12 3 6 16 At1g68875 expressed protein 12 3 6 17 At1g68920 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 3 6 18 At1g69080 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 12 3 6 19 At1g69170 squamosa promoter-binding protein-like 6 (SPL6) identical to squamosa promoter binding protein-like 6 [Arabidopsis thaliana] GI:5931683; contains Pfam profile PF03110: SBP domain 12 3 6 20 At1g71880 sucrose transporter / sucrose-proton symporter (SUC1) identical to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094 12 3 6 21 At1g71940 expressed protein 12 3 6 22 At1g72100 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to embryogenic gene [Betula pendula] GI:4539485; contains Pfam profile PF02987: Late embryogenesis abundant protein 12 3 6 23 At1g72150 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to SEC14-like protein 2 (Alpha-tocopherol associated protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos taurus}; similar to GI:807956 from [Saccharomyces cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 12 3 6 24 At1g72320 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806 Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (5 copies)" 12 3 6 25 At1g72380 expressed protein 12 3 7 1 At1g72550 "tRNA synthetase beta subunit family protein contains Pfam profiles: PF03484 phenylalanine-tRNA synthetase, B5 domain, PF03483 B3/4 domain; an isoform contains a non-consensus TG acceptor splice site at a terminal exon." 12 3 7 2 At1g72610 germin-like protein (GER1) identical to germin-like protein subfamily 3 member 1 SP|P94040; contains Pfam profile: PF01072 Germin family 12 3 7 3 AT5G57480 PC-1 C01 12 3 7 4 3XSSC PC-1 C13 12 3 7 5 AT1G29930 PC-1 G01 12 3 7 6 3XSSC PC-1 G13 12 3 7 7 AT3G44150 PC-1 K01 12 3 7 8 3XSSC PC-1 K13 12 3 7 9 AT4G00810 PC-1 O01 12 3 7 10 3XSSC PC-1 O13 12 3 7 11 At1g75380 wound-responsive protein-related similar to wound inducive gene GI:8096273 from [Nicotiana tabacum] 12 3 7 12 At1g75440 "ubiquitin-conjugating enzyme 16 (UBC16) E2; identical to gi:2801444, GB:AAC39325 from [Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396 (1993))" 12 3 7 13 At1g75660 5'-3' exoribonuclease (XRN3) identical to XRN3 [Arabidopsis thaliana] gi|11875628|gb|AAG40732 12 3 7 14 At1g75710 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 12 3 7 15 At1g75880 family II extracellular lipase 1 (EXL1) EXL1 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 12 3 7 16 At1g75940 glycosyl hydrolase family 1 protein / anther-specific protein ATA27 contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 12 3 7 17 At1g76110 "high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein low similarity to high mobility group protein [Plasmodium falciparum] GI:790198; contains Pfam profiles PF00505: HMG (high mobility group) box, PF01388: ARID/BRIGHT DNA binding domain" 12 3 7 18 At1g76170 expressed protein contains Pfam profile PF01171: PP-loop family 12 3 7 19 At1g78810 expressed protein 12 3 7 20 At1g78840 F-box family protein contains F-box domain Pfam:PF00646 12 3 7 21 At1g78980 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase 2 GI:3360291 from [Zea mays]" 12 3 7 22 At1g79030 "DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative similar to S-locus protein 5 (GI:6069485) [Brassica rapa]; contains Pfam profile PF00226 DnaJ domain" 12 3 7 23 At1g79200 expressed protein 12 3 7 24 At1g79270 expressed protein contains Pfam profile PF04146: YT521-B-like family 12 3 7 25 At1g79450 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to GI:4966357; GI:4585976; GI:11994416; GI:9757735 from [Arabidopsis thaliana] 12 3 8 1 At1g79490 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 12 3 8 2 At2g02070 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 3 8 3 At2g02140 "plant defensin-fusion protein, putative (PDF2.6) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to protease inhibitor II [Brassica rapa] gi|1209258|gb|AAA91049" 12 3 8 4 At2g02380 "glutathione S-transferase, putative similar to gi:167970 gb:AAA72320 gb:AY052332" 12 3 8 5 At2g02450 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain 12 3 8 6 At2g02620 "DC1 domain-containing protein / PHD finger protein-related contains Pfam profiles PF03107: DC1 domain, weak hit to PF00628: PHD-finger" 12 3 8 7 At2g02690 hypothetical protein 12 3 8 8 At2g02840 expressed protein 12 3 8 9 At2g02910 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 12 3 8 10 At2g06390 hypothetical protein 12 3 8 11 At2g06530 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 12 3 8 12 At2g06914 hypothetical protein 12 3 8 13 At2g07040 "leucine-rich repeat transmembrane protein kinase, putative " 12 3 8 14 At2g07340 "prefoldin-related KE2 family protein contains similarity to Swiss-Prot:O60925 prefoldin subunit 1 [Homo sapiens]; contains Pfam domain, PF01920: KE2 family protein" 12 3 8 15 At2g07505 hypothetical protein and genefinder 12 3 8 16 At2g07678 hypothetical protein 12 3 8 17 At2g07689 "NADH-ubiquinone oxidoreductase, putative strong similarity to NADH-ubiquinone oxidoreductase [Arabidopsis thaliana] GI:1536885; contains Pfam profile PF00361: NADH-Ubiquinone/plastoquinone (complex I), various chains" 12 3 8 18 At2g15280 "reticulon family protein (RTNLB10) low similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311, SP|Q64548 Reticulon 1 (Neuroendocrine-specific protein) {Rattus norvegicus}; contains Pfam profile PF02453: Reticulon" 12 3 8 19 At2g15327 expressed protein 12 3 8 20 At2g15490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 3 8 21 At2g15560 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 12 3 8 22 At2g15740 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 3 8 23 At2g15800 expressed protein and genefinder 12 3 8 24 At2g16040 hAT dimerisation domain-containing protein / transposase-related low similarity to transposase [Ipomoea purpurea] AB004906 GI:4063770 12 3 8 25 At2g16100 hypothetical protein 12 3 9 1 At2g18920 hypothetical protein 12 3 9 2 At2g18980 "peroxidase, putative identical to peroxidase ATP22a [Arabidopsis thaliana] gi|1620369|emb|CAA70034" 12 3 9 3 At2g19180 expressed protein 12 3 9 4 At2g19240 RabGAP/TBC domain-containing protein low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain 12 3 9 5 At2g19440 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum]; an isoform contains a non-consensus GA-AG intron 12 3 9 6 At2g19500 "FAD-binding domain-containing protein / cytokinin oxidase family protein similar to cytokinin oxidase, Zea mays [SP|Q9T0N8] [gi:3441978]" 12 3 9 7 At2g19640 SET domain-containing protein contains Pfam profile PF00856: SET domain 12 3 9 8 At2g19700 expressed protein 12 3 9 9 At2g22400 NOL1/NOP2/sun family protein contains Pfam profile PF01189: NOL1/NOP2/sun family 12 3 9 10 At2g22450 "riboflavin biosynthesis protein, putative similar to SP|P50855 Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] {Actinobacillus pleuropneumoniae}; contains Pfam profiles PF00925: GTP cyclohydrolase II, PF00926: 3,4-dihydroxy-2-butanone 4-phosphate synthase" 12 3 9 11 At2g22640 "BRICK1, putative similar to BRICK1 (GI:20338425) [Zea mays]" 12 3 9 12 At2g22690 expressed protein 12 3 9 13 At2g22870 expressed protein 12 3 9 14 At2g22920 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 12 3 9 15 At2g23060 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 12 3 9 16 At2g23093 expressed protein 12 3 9 17 At2g25970 KH domain-containing protein 12 3 9 18 At2g26030 F-box family protein contains F-box domain Pfam:PF00646 12 3 9 19 At2g26190 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 12 3 9 20 At2g26260 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 12 3 9 21 At2g26440 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 12 3 9 22 At2g26500 "cytochrome b6f complex subunit (petM), putative nearly identical to cytochrome b6f complex subunit (GI:3090403) [Arabidopsis thaliana]; alternative splice forms exist" 12 3 9 23 At2g26640 "beta-ketoacyl-CoA synthase, putative similar to beta-ketoacyl-CoA synthase [Simmondsia chinensis][GI:1045614]" 12 3 9 24 At2g26695 zinc finger (Ran-binding) family protein contains Pfam profile PF00641: Zn-finger in Ran binding protein and others 12 3 9 25 At2g29370 "tropinone reductase, putative / tropine dehydrogenase, putative similar to SP|P50162 Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase) {Datura stramonium}" 12 3 10 1 At2g29400 "serine/threonine protein phosphatase PP1 isozyme 1 (TOPP1) / phosphoprotein phosphatase 1 identical to SP|P30366| Serine/threonine protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) {Arabidopsis thaliana}, phosphoprotein phosphatase 1 GI:166572 [Arabidopsis thaliana]" 12 3 10 2 At2g29570 "proliferating cell nuclear antigen 2 (PCNA2) identical to SP|Q9ZW35 Proliferating cell nuclear antigen 2 (PCNA 2) {Arabidopsis thaliana}; nearly identical to SP|Q43124 Proliferating cell nuclear antigen (PCNA) {Brassica napus}; contains Pfam profiles PF00705: Proliferating cell nuclear antigen N-terminal domain, PF02747: Proliferating cell nuclear antigen C-terminal domain" 12 3 10 3 At2g29620 expressed protein 12 3 10 4 At2g29770 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; similar to SKP1 interacting partner 6 (GI:10716957) [Arabidopsis thaliana] 12 3 10 5 At2g29830 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; similar to SKP1 interacting partner 6 (GI:10716957) [Arabidopsis thaliana] 12 3 10 6 At2g29980 "omega-3 fatty acid desaturase, endoplasmic reticulum (FAD3) identical to SP:48623" 12 3 10 7 At2g30040 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 3 10 8 At2g32660 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4 [Lycopersicon hirsutum] gi|2808683|emb|CAA05268" 12 3 10 9 At2g32710 kip-related protein 4 (KRP4) / cyclin-dependent kinase inhibitor 4 (ICK4) nearly identical to cyclin-dependent kinase inhibitor 4 (krp4) [Arabidopsis thaliana] GI:14422291 12 3 10 10 At2g32850 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 3 10 11 At2g32900 "centromere/kinetochore protein, putative (ZW10) identical to centromere/kinetochore protein zw10 homolog SP:O48626 from [Arabidopsis thaliana]" 12 3 10 12 At2g33070 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, epithiospecifier [Arabidopsis thaliana] GI:16118845; contains Pfam profiles PF01419 jacalin-like lectin family, PF01344 Kelch motif" 12 3 10 13 At2g33130 rapid alkalinization factor (RALF) family protein 12 3 10 14 At2g33300 hypothetical protein 12 3 10 15 At2g33340 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] 12 3 10 16 At2g35910 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 12 3 10 17 At2g35970 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 12 3 10 18 At2g36080 "DNA-binding protein, putative strong similarity to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 12 3 10 19 At2g36160 40S ribosomal protein S14 (RPS14A) 12 3 10 20 At2g36320 "zinc finger (AN1-like) family protein contains Pfam domain, PF01428: AN1-like Zinc finger" 12 3 10 21 At2g36380 ABC transporter family protein related to multi drug resistance proteins and P-glycoproteins 12 3 10 22 At2g36540 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 12 3 10 23 At2g36610 homeobox-leucine zipper family protein similar to homeobox protein PpHB8 (GP:7415628) [Physcomitrella patens]; contains PfamPF00046: Homeobox domain 12 3 10 24 At2g39190 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 12 3 10 25 At2g39230 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 3 11 1 At2g39410 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 3 11 2 At2g39440 expressed protein 12 3 11 3 At2g39630 glycosyl transferase family 2 protein similar to dolichyl-phosphate beta-glucosyltransferase from Saccharomyces cerevisiae [SP|P40350]; contains Pfam glycosyltransferase group 2 domain PF00535 12 3 11 4 At2g39690 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 12 3 11 5 At2g39795 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 12 3 11 6 At2g39840 "serine/threonine protein phosphatase PP1 isozyme 4 (TOPP4) / phosphoprotein phosphatase 1 identical to SP|P48484 Serine/threonine protein phosphatase PP1 isozyme 4 (EC 3.1.3.16) {Arabidopsis thaliana}, phosphoprotein phosphatase 1 GI:166801 (Arabidopsis thaliana); contains a Ser/Thr protein phosphatase signature (PDOC00115); contains a metallo-phosphoesterase motif (QDOC50185)" 12 3 11 7 At2g42310 expressed protein 12 3 11 8 At2g42370 expressed protein 12 3 11 9 At2g42520 "DEAD box RNA helicase, putative similar to SP|O00571 DEAD-box protein 3 (Helicase-like protein 2) {Homo sapiens}, DEAD box RNA helicase DDX3 [Homo sapiens] GI:3523150; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 12 3 11 10 At2g42560 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to LEA protein [Glycine max] GI:1389897; contains Pfam profile PF02987: Late embryogenesis abundant protein 12 3 11 11 At2g42720 F-box family protein contains F-box domain Pfam:PF00646 12 3 11 12 At2g42780 expressed protein 12 3 11 13 At2g42940 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 12 3 11 14 At2g42990 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 12 3 11 15 At2g45660 MADS-box protein (AGL20) 12 3 11 16 At2g45720 armadillo/beta-catenin repeat family protein contains Pfam profile PF00514: Armadillo/beta-catenin-like repeat 12 3 11 17 At2g45880 glycosyl hydrolase family 14 protein similar to beta-amylase GI:13560977 from [Castanea crenata] 12 3 11 18 At2g45940 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 12 3 11 19 At2g46100 expressed protein 12 3 11 20 At2g46150 expressed protein and genefinder 12 3 11 21 At2g46290 "eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative strong similarity to SP|Q38884 Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor interacting protein 1) (TRIP-1) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies)|19799885|gb|AU231175.1|AU231175" 12 3 11 22 At2g46330 arabinogalactan-protein (AGP16) identical to gi|10880509|gb|AAG24284 12 3 11 23 At3g01680 expressed protein 12 3 11 24 At3g01740 expressed protein 12 3 11 25 At3g01870 hypothetical protein 12 3 12 1 At3g01930 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 12 3 12 2 At3g02070 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 12 3 12 3 At3g02125 hypothetical protein 12 3 12 4 At3g02250 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'auxin-independent growth promoter -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 12 3 12 5 At3g02290 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger motif, C3HC4 type (RING finger)" 12 3 12 6 At3g04930 "expressed protein contains Pfam profile: PF04504 protein of unknown function, DUF573" 12 3 12 7 At3g04980 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 12 3 12 8 At3g05150 "sugar transporter family protein similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 12 3 12 9 At3g05190 aminotransferase class IV family protein contains Pfam profile: PF01063 aminotransferase class IV 12 3 12 10 At3g05370 "disease resistance family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2 disease resistance protein GB:AAC15780 from [Lycopersicon pimpinellifolium]" 12 3 12 11 At3g05430 PWWP domain-containing protein contains Pfam profile:PF00855 PWWP domain 12 3 12 12 At3g05560 60S ribosomal protein L22-2 (RPL22B) identical to 60S ribosomal protein L22-2 SP:Q9M9W1 from [Arabidopsis thaliana] 12 3 12 13 At3g05620 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 12 3 12 14 At3g08500 myb family transcription factor (MYB83) contains Pfam profile: PF00249: Myb-like DNA-binding domain 12 3 12 15 At3g08560 "vacuolar ATP synthase subunit E, putative / V-ATPase E subunit, putative / vacuolar proton pump E subunit, putative similar to SP|Q39258 Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) {Arabidopsis thaliana}; contains Pfam profile PF01991: ATP synthase (E/31 kDa) subunit" 12 3 12 16 At3g08720 serine/threonine protein kinase (PK19) identical to serine/threonine-protein kinase AtPK19 (Ribosomal-protein S6 kinase homolog) [Arabidopsis thaliana] SWISS-PROT:Q39030 12 3 12 17 At3g08780 expressed protein 12 3 12 18 At3g08930 LMBR1 integral membrane family protein contains 5 transmembrane domains; contains Pfam PF04791: LMBR1-like conserved region; similar to unknown protein GB:BAA83351 [Oryza sativa] 12 3 12 19 At3g08960 importin beta-2 subunit family protein low similarity to Lph2p [Saccharomyces cerevisiae] GI:1163089; contains Pfam profile PF03810: Importin-beta N-terminal domain 12 3 12 20 At3g09100 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF00782: Dual specificity phosphatase catalytic domain" 12 3 12 21 At3g09150 "phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) identical to SP|Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor (EC 1.3.7.4) (Phytochromobilin synthase) (PFB synthase) (PPhiB synthase) {Arabidopsis thaliana}; identical to cDNA for phytochromobilin synthase HY2 protein, GI:13359272" 12 3 12 22 At3g11640 expressed protein 12 3 12 23 At3g11690 expressed protein 12 3 12 24 At3g11850 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 12 3 12 25 At3g11890 expressed protein 12 3 13 1 At3g12010 expressed protein contains Prosite PS00626: Regulator of chromosome condensation (RCC1) signature 2 12 3 13 2 At3g12050 Aha1 domain-containing protein contains Pfam PF05146: Aha1 domain; similar to Protein C14orf3 (HSPC322) (Swiss-Prot:O95433) [Homo sapiens] 12 3 13 3 At3g12203 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase; similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare] 12 3 13 4 At3g12240 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase; similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 12 3 13 5 At3g14680 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 12 3 13 6 At3g14740 PHD finger family protein similar to zinc-finger protein BR140 [PIR|JC2069][Homo sapiens]; contains PHD-finger domain PF00628 12 3 13 7 At3g14860 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 12 3 13 8 At3g14900 expressed protein 12 3 13 9 At3g15040 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 12 3 13 10 At3g15095 expressed protein 12 3 13 11 At3g15260 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GB:AAD17805 from [Lotus japonicus]" 12 3 13 12 At3g15320 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 12 3 13 13 At3g17900 expressed protein 12 3 13 14 At3g17970 "chloroplast outer membrane translocon subunit, putative similar to Toc64 [Pisum sativum] GI:7453538; contains Pfam profile PF00515 TPR Domain" 12 3 13 15 At3g18150 hypothetical protein 12 3 13 16 At3g18180 "hypothetical protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 12 3 13 17 At3g18340 F-box family protein contains F-box domain Pfam:PF00646 12 3 13 18 At3g18380 expressed protein 12 3 13 19 At3g18540 expressed protein 12 3 13 20 At3g18600 "DEAD/DEAH box helicase, putative non-consensus acceptor splice site AT at exon 2; similar to DEAD box helicase protein GB:NP_006764 from [Homo sapiens], contains Pfam profile: PF00270 DEAD/DEAH box helicase" 12 3 13 21 At3g21280 "ubiquitin-specific protease 7, putative (UBP7) similar to GI:11993467" 12 3 13 22 At3g21340 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 3 13 23 At3g21520 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 12 3 13 24 At3g21580 expressed protein 12 3 13 25 At3g21700 expressed protein 12 3 14 1 At3g21730 dihydroneopterin aldolase family protein similar to SP|O33725 Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) {Streptococcus pyogenes}; contains Pfam profile PF02152: dihydroneopterin aldolase 12 3 14 2 At3g21900 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069 12 3 14 3 At3g21960 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; belongs to a family which includes receptor-like kinase family proteins 12 3 14 4 At3g24670 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 12 3 14 5 At3g24720 protein kinase family protein protein kinase family; similar to tyrosine-protein kinase GB:P18160 from [Dictyostelium discoideum] 12 3 14 6 At3g24900 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 12 3 14 7 At3g25040 "ER lumen protein retaining receptor, putative / HDEL receptor, putative similar to SP|P35402 ER lumen protein retaining receptor (HDEL receptor) {Arabidopsis thaliana}; contains Pfam profile PF00810: ER lumen protein retaining receptor" 12 3 14 8 At3g25190 "nodulin, putative similar to nodulin 21 (N-21) [Glycine max] SWISS-PROT:P16313" 12 3 14 9 At3g25250 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 3 14 10 At3g25540 longevity-assurance (LAG1) family protein similar to Alternaria stem canker resistance protein (ASC1) [Lycopersicon esculentum] GI:7688742; contains Pfam profile PF03798: Longevity-assurance protein (LAG1); supporting cDNA gi|7658238|gb|AF198179.1|AF198179 12 3 14 11 At3g25585 "aminoalcoholphosphotransferase, putative strong similarity to aminoalcoholphosphotransferase [Arabidopsis thaliana] GI:3661593; contains Pfam profile PF01066: CDP-alcohol phosphatidyltransferase" 12 3 14 12 At3g28190 hypothetical protein 12 3 14 13 At3g28250 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 12 3 14 14 At3g28430 expressed protein non-consensus GC donor splice site at exon 16 12 3 14 15 At3g28490 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Caenorhabditis elegans [GI:607947], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 12 3 14 16 At3g28670 expressed protein 12 3 14 17 At3g28720 expressed protein 12 3 14 18 At3g28900 60S ribosomal protein L34 (RPL34C) similar to 60S ribosomal protein L34 GB:P41098 [Nicotiana tabacum] 12 3 14 19 At3g28940 "avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative strong similarity to SP|P54121 AIG2 protein (avrRpt2-induced gene) {Arabidopsis thaliana}" 12 3 14 20 At3g42730 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 12 3 14 21 At3g42786 hypothetical protein 12 3 14 22 At3g43100 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 12 3 14 23 At3g43160 "expressed protein merozoite surface protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum" 12 3 14 24 At3g43370 "hypothetical protein similar to At2g14780, At1g34710, At1g27810, At3g42760, At1g25784, At4g08890" 12 3 14 25 At3g43430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 3 15 1 At3g43590 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 3 15 2 At3g43680 hypothetical protein 12 3 15 3 At3g46620 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 12 3 15 4 At3g46680 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 3 15 5 At3g46860 "serine protease inhibitor, potato inhibitor I-type family protein similar to SP|P19873 Inhibitor of trypsin and hageman factor (CMTI-V) {Cucurbita maxima}; contains Pfam profile PF00280: Potato inhibitor I family" 12 3 15 6 At3g46920 protein kinase family protein similar to MAP3K delta-1 protein kinase [Arabidopsis thaliana] GI:2253010; contains Pfam profile: PF00069 Eukaryotic protein kinase domain 12 3 15 7 At3g47100 expressed protein 12 3 15 8 At3g47160 expressed protein similar to MTD2 [Medicago truncatula] GI:9294812; supporting cDNA gi|25083983|gb|BT002136.1| 12 3 15 9 At3g47330 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 12 3 15 10 At3g47370 "40S ribosomal protein S20 (RPS20B) 40S RIBOSOMAL PROTEIN S20 - ARABIDOPSIS THALIANA,PID:g1350956" 12 3 15 11 At3g50170 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 12 3 15 12 At3g50210 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 12 3 15 13 At3g50380 expressed protein 12 3 15 14 At3g50440 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 3 15 15 At3g50620 nodulation protein-related contains weak similarity to nodulation protein H (EC 2.8.2.-) (Host-specificity of nodulation protein D) (Swiss-Prot:P06237) [Rhizobium meliloti] 12 3 15 16 At3g50670 U1 small nuclear ribonucleoprotein 70 (U1-70k) 12 3 15 17 At3g50850 expressed protein 12 3 15 18 At3g50910 expressed protein 12 3 15 19 At3g53470 "expressed protein ribosomal protein S25, cytosolic, Arabidopsis thaliana, PIR:T08568" 12 3 15 20 At3g53510 "ABC transporter family protein breast cancer resistance protein (BCRP), Homo sapiens, EMBL:AF098951" 12 3 15 21 At3g53680 "PHD finger transcription factor, putative predicted proteins, Arabidopsis thaliana" 12 3 15 22 At3g53740 "60S ribosomal protein L36 (RPL36B) 60S RIBOSOMAL PROTEIN L36 - Schizosaccharomyces pombe, swissprot:Q92365" 12 3 15 23 At3g53880 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 12 3 15 24 At3g53920 "RNA polymerase sigma subunit SigC (sigC) / sigma factor 3 (SIG3) identical to sigma factor SigC [Arabidopsis thaliana] GI:5478585, sigma factor 3 (SIG3) [Arabidopsis thaliana] GI:2353175, plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] GI:2398853; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 12 3 15 25 At3g54040 photoassimilate-responsive protein-related contains weak similarity to mRNA inducible by sucrose and salicylic acid expressed in sugar-accumulating tobacco plants (GI:871487) [Nicotiana tabacum] 12 3 16 1 At3g54100 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 12 3 16 2 At3g56870 hypothetical protein 12 3 16 3 At3g56930 zinc finger (DHHC type) family protein low similarity to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 12 3 16 4 At3g57110 hypothetical protein 12 3 16 5 At3g57170 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein similar to SP|O14357 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 {Schizosaccharomyces pombe}; contains Pfam profile PF05024: N-acetylglucosaminyl transferase component (Gpi1) 12 3 16 6 At3g57340 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 12 3 16 7 At3g57390 "MADS-box protein (AGL18) agamous-like protein 15 - Arabidopsis thaliana, PIR:S71200" 12 3 16 8 At3g57540 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 12 3 16 9 At3g57600 "AP2 domain-containing transcription factor, putative various proteins containing an AP2 transcription factor domain, Arabidopsis thaliana" 12 3 16 10 At3g60360 expressed protein 12 3 16 11 At3g60410 expressed protein 12 3 16 12 At3g60570 "beta-expansin, putative (EXPB5) conatins similarity to beta-expansin GI:8118428 from [Oryza sativa]; beta-expansin gene family, PMID:11641069" 12 3 16 13 At3g60630 "scarecrow transcription factor family protein scarecrow-like 6, Arabidopsis thaliana, EMBL:AF036303" 12 3 16 14 At3g60810 expressed protein 12 3 16 15 At3g60850 expressed protein 12 3 16 16 At3g61040 "cytochrome P450 family protein similar to cytochrome P450 monooxygenase - Arabidopsis thaliana, EMBL:D78600" 12 3 16 17 At3g61090 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 12 3 16 18 At4g00230 subtilisin-like serine endopeptidase (XSP1) identical to subtilisin-type serine endopeptidase XSP1 GI:6708179 from [Arabidopsis thaliana] 12 3 16 19 At4g00250 "DNA-binding storekeeper protein-related contains Pfam profile: PF04504 protein of unknown function, DUF573; similar to storekeeper protein GI:14268476 [Solanum tuberosum]" 12 3 16 20 At4g00355 expressed protein 12 3 16 21 At4g00416 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 12 3 16 22 At4g00540 myb family transcription factor 12 3 16 23 At4g00560 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] 12 3 16 24 At4g00700 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 12 3 16 25 At4g00752 "UBX domain-containing protein similar to Ara4-interacting protein [Arabidopsis thaliana] GI:13160609; contains Pfam profiles PF00789: UBX domain, PF02809: Ubiquitin interaction motif" 12 3 17 1 At4g03220 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 12 3 17 2 At4g03280 "cytochrome B6-F complex iron-sulfur subunit, chloroplast / Rieske iron-sulfur protein / plastoquinol-plastocyanin reductase (petC) identical to gi:9843639; identical to cDNA rieske iron-sulfur protein precursor (petC) GI:5725449" 12 3 17 3 At4g03410 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:P42925 22 kDa peroxisomal membrane protein [Mus musculus] 12 3 17 4 At4g03460 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 12 3 17 5 At4g03620 "myosin heavy chain-related contains weak similarity to Swiss-Prot:P24733 myosin heavy chain, striated muscle [Aequipecten irradians]" 12 3 17 6 At4g03690 "hypothetical protein very low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 12 3 17 7 At4g04020 "plastid-lipid associated protein PAP, putative / fibrillin, putative strong similarity to plastid-lipid associated proteins PAP1 GI:14248554, PAP2 GI:14248556 from [Brassica rapa], fibrillin [Brassica napus] GI:4139097; contains Pfam profile PF04755: PAP_fibrillin" 12 3 17 8 At4g04110 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 12 3 17 9 At4g08850 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 12 3 17 10 At4g08876 pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related contains weak similarity to pyrophosphate-fructose 6-phosphate 1-phosphotransferase beta-subunit gi|169540|gb|AAA63452 12 3 17 11 At4g09060 expressed protein 12 3 17 12 At4g09120 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 12 3 17 13 At4g09340 SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 12 3 17 14 At4g09420 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 12 3 17 15 At4g09580 expressed protein 12 3 17 16 At4g09640 expressed protein several hypothetical proteins - Arabidopsis thaliana 12 3 17 17 At4g12400 "stress-inducible protein, putative similar to sti (stress inducible protein) [Glycine max] GI:872116; contains Pfam profile PF00515 TPR Domain" 12 3 17 18 At4g12440 "adenine phosphoribosyltransferase, putative strong similarity to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 12 3 17 19 At4g12610 "transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein low similarity to SP|Q05913 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) (Transcription factor 5, large chain) (TF5A) {Drosophila melanogaster}; contains Pfam profile PF05793: Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)" 12 3 17 20 At4g12690 expressed protein 12 3 17 21 At4g12840 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 12 3 17 22 At4g12900 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 12 3 17 23 At4g13080 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to endoxyloglucan transferase EXGT-A1 GI:5533309 from [Arabidopsis thaliana]" 12 3 17 24 At4g13130 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 12 3 17 25 At4g15490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to UDP-glucose:sinapate glucosyltransferase GI:9794913 from [Brassica napus] 12 3 18 1 At4g15530 "pyruvate phosphate dikinase family protein contains Pfam profiles: PF01326 pyruvate phosphate dikinase, PEP/pyruvate binding domain, PF02896 PEP-utilizing enzyme, TIM barrel domain" 12 3 18 2 At4g15715 hypothetical protein 12 3 18 3 At4g15755 C2 domain-containing protein similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 12 3 18 4 At4g15910 drought-responsive protein / drought-induced protein (Di21) identical to GI:469112; contains PF03242 Late embryogenesis abundant protein domain 12 3 18 5 At4g15960 "epoxide hydrolase, putative similar to epoxide hydrolase [Solanum tuberosum] GI:407944; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 3 18 6 At4g16120 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region; supporting cDNA gi|26449620|dbj|AK117261.1| 12 3 18 7 At4g16146 expressed protein 12 3 18 8 At4g18610 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 12 3 18 9 At4g18670 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 12 3 18 10 At4g18830 ovate family protein 52% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 12 3 18 11 At4g18890 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 12 3 18 12 At4g19010 "4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to 4CL from Pinus taeda, gi:515503, gi:1143308; contains Pfam AMP-binding enzyme domain PF00501" 12 3 18 13 At4g19070 cadmium-responsive protein / cadmium induced protein (AS8) identical to cadmium induced protein AS8 SP:P42735 from [Arabidopsis thaliana] 12 3 18 14 At4g19200 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 12 3 18 15 At4g19240 expressed protein 12 3 18 16 At4g22120 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 12 3 18 17 At4g22160 expressed protein 12 3 18 18 At4g22270 expressed protein 12 3 18 19 At4g22310 "expressed protein contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041)" 12 3 18 20 At4g22470 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to hydroxyproline-rich glycoprotein DZ-HRGP from Volvox carteri f. nagariensis GP|6523547; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family 12 3 18 21 At4g22540 "oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 12 3 18 22 At4g22720 glycoprotease M22 family protein similar to sialylglycoprotease [Haemophilus ducreyi] GI:6942294; contains Pfam profile PF00814: Glycoprotease family 12 3 18 23 At4g22753 sterol desaturase family protein similar to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; contains Pfam profile PF01598: Sterol desaturase 12 3 18 24 At4g25320 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 12 3 18 25 At4g25380 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 12 3 19 1 At4g25515 transcriptional co-regulator family protein contains similarity to GP|18033922|gb|AAL57277 SEUSS transcriptional co-regulator [Arabidopsis thaliana] 12 3 19 2 At4g25570 "cytochrome B561 family protein contains Pfam domain, PF03188: Cytochrome b561" 12 3 19 3 At4g25730 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 12 3 19 4 At4g25790 allergen V5/Tpx-1-related family protein similar to SP|Q40374 Pathogenesis-related protein PR-1 precursor {Medicago truncatula}; contains Pfam profile PF00188: SCP-like extracellular protein 12 3 19 5 At4g25960 "multidrug resistance P-glycoprotein, putative similar to multidrug resistant P-glycoprotein GI:4204793 from [Solanum tuberosum]" 12 3 19 6 At4g26000 "KH domain-containing protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515" 12 3 19 7 At4g28520 "12S seed storage protein, putative / cruciferin, putative strong similarity to SP|P33525 Cruciferin CRU1 precursor (11S globulin) (12S storage protein) from Brassica napus; contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305 isoform contains non-consensus AC acceptor splice site at intron 3" 12 3 19 8 At4g28560 "leucine-rich repeat family protein (fragment) contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611;" 12 3 19 9 At4g28710 "myosin heavy chain, putative similar to myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066." 12 3 19 10 At4g28760 expressed protein predicted protein. Arabidopsis thaliana 12 3 19 11 At4g28950 Rac-like GTP-binding protein (ARAC7) identical to rac GTP binding protein Arac7 GI:3702962 from [Arabidopsis thaliana] 12 3 19 12 At4g29000 "tesmin/TSO1-like CXC domain-containing protein similar to CXC domain containing TSO1-like protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, SP|Q9Y4I5 Tesmin (Metallothionein-like 5, testis-specific) {Homo sapiens}; contains Pfam profile PF03638: Tesmin/TSO1-like CXC domain" 12 3 19 13 At4g29160 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 12 3 19 14 At4g29210 gamma-glutamyltranspeptidase family protein similar to SP|P07314 Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 12 3 19 15 At4g31780 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative similar to MGD synthase type A from Arabidopsis thaliana [gi:9927297], similar to monogalactosyldiacylglycerol synthase, Cucumis sativus, PID:g1805254" 12 3 19 16 At4g31805 WRKY family transcription factor identical to WRKY DNA-binding protein 18 (WRKY18) GI:13506730 from [Arabidopsis thaliana] 12 3 19 17 At4g31960 hypothetical protein 12 3 19 18 At4g32000 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 3 19 19 At4g32150 synaptobrevin family protein similar to Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens] 12 3 19 20 At4g32200 "DNA-binding HORMA domain-containing protein similar to meiotic asynaptic mutant 1 [Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica oleracea var. alboglabra] GI:23506946; contains Pfam profile PF02301: HORMA domain" 12 3 19 21 At4g32380 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 12 3 19 22 At4g32440 agenet domain-containing protein contains Pfam PF05641: Agenet domain 12 3 19 23 AT5G57480 PC-1 C01 12 3 19 24 3XSSC PC-1 C13 12 3 19 25 AT1G29930 PC-1 G01 12 3 20 1 3XSSC PC-1 G13 12 3 20 2 AT3G44150 PC-1 K01 12 3 20 3 3XSSC PC-1 K13 12 3 20 4 AT4G00810 PC-1 O01 12 3 20 5 3XSSC PC-1 O13 12 3 20 6 At4g34990 myb family transcription factor (MYB32) similar to myb DNA-binding protein GI:19052 from [Hordeum vulgare] 12 3 20 7 At4g35050 WD-40 repeat protein (MSI3) contains 5 WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI3 (SP:O22469) [Arabidopsis thaliana] 12 3 20 8 At4g35190 expressed protein contains Pfam profile PF03641: decarboxylase family protein 12 3 20 9 At4g35250 vestitone reductase-related low similarity to vestitone reductase [Medicago sativa subsp. sativa] GI:973249 12 3 20 10 At4g35390 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 12 3 20 11 At4g35430 expressed protein 12 3 20 12 At4g35590 RWP-RK domain-containing protein low similarity to minus dominance protein [Chlamydomonas reinhardtii] GI:1928929; contains Pfam profile: PF02042 RWP-RK domain 12 3 20 13 At4g35650 "isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative strong similarity to NAD+ dependent isocitrate dehydrogenase subunit 1 [Arabidopsis thaliana] GI:1766046" 12 3 20 14 At4g38260 expressed protein contains Pfam PF05742: Protein of unknown function (DUF833) 12 3 20 15 At4g38320 "expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073)" 12 3 20 16 At4g38500 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 12 3 20 17 At4g38560 expressed protein 12 3 20 18 At4g38740 peptidyl-prolyl cis-trans isomerase / cyclophilin / rotamase / cyclosporin A-binding protein (ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) {Arabidopsis thaliana} 12 3 20 19 At4g38800 phosphorylase family protein contains weak similarity to Swiss-Prot:O51931 nucleosidase [Includes: 5'-methylthioadenosine nucleosidase (EC 3.2.2.16); S-adenosylhomocysteine nucleosidase [Buchnera aphidicola] 12 3 20 20 At4g38930 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 12 3 20 21 At4g38970 "fructose-bisphosphate aldolase, putative strong similarity to plastidic fructose-bisphosphate aldolase (EC 4.1.2.13) from Nicotiana paniculata (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057 [SP|Q40677]" 12 3 20 22 At5g02420 expressed protein 12 3 20 23 At5g02470 "DP-2 transcription factor, putative (DPA) similar to Swiss-Prot:Q14188 transcription factor DP-2 (E2F dimerization partner 2) [Homo sapiens]" 12 3 20 24 At5g02600 "heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana" 12 3 20 25 At5g02650 expressed protein 12 3 21 1 At5g02810 pseudo-response regulator 7 (APRR7) identical to pseudo-response regulator 7 GI:10281004 from [Arabidopsis thaliana] 12 3 21 2 At5g02850 hydroxyproline-rich glycoprotein family protein 12 3 21 3 At5g03030 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain; DNAJ domain-containing protein, Homo sapiens, EMBL:AF126743" 12 3 21 4 At5g03090 hypothetical protein 12 3 21 5 At5g05750 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 12 3 21 6 At5g05810 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 3 21 7 At5g05965 hypothetical protein 12 3 21 8 At5g06010 hypothetical protein similar to unknown protein (gb|AAF04428.1) 12 3 21 9 At5g06160 splicing factor-related contains some similarity to splicing factor SP:Q12874 from [Homo sapiens] 12 3 21 10 At5g06200 integral membrane family protein similar to unknown protein (gb|AAF00668.1); contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 12 3 21 11 At5g06350 expressed protein 12 3 21 12 At5g06410 DNAJ heat shock N-terminal domain-containing protein similar to SP|P36540 Chaperone protein hscB (HSC20) {Escherichia coli O157:H7}; contains Pfam profile PF00226 DnaJ domain 12 3 21 13 At5g09490 "40S ribosomal protein S15 (RPS15B) ribosomal protein S15 - Arabidopsis thaliana, EMBL:Z23161" 12 3 21 14 At5g09550 "Rab GDP dissociation inhibitor, putative strong similarity to GDP dissociation inhibitor protein OsGDI1 [Oryza sativa] GI:2384758; contains Pfam profile PF00996: GDP dissociation inhibitor" 12 3 21 15 At5g09720 magnesium transporter CorA-like family protein (MRS2-8) contains Pfam profile PF01544: CorA-like Mg2+ transporter protein 12 3 21 16 At5g09780 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 12 3 21 17 At5g09940 hypothetical protein 12 3 21 18 At5g09995 expressed protein 12 3 21 19 At5g10130 pollen Ole e 1 allergen and extensin family protein contains similarity to pollen specific protein C13 precursor [Zea mays] SWISS-PROT:P33050 12 3 21 20 At5g10190 "transporter-related low similarity to spinster membrane proteins from [Drosophila melanogaster] GI:12003974, GI:12003976, GI:12003972, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein" 12 3 21 21 At5g13310 expressed protein 12 3 21 22 At5g13370 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 12 3 21 23 At5g13530 protein kinase family protein / ankyrin repeat family protein contains similarity to ankyrin-related gene UNC-44 gi|790608|gb|AAA85854; contains Pfam domains PF00023: Ankyrin repeat and PF00069: Protein kinase domain 12 3 21 24 At5g13570 MutT/nudix family protein similar to mRNA-decapping enzyme [Homo sapiens] GI:23268269; contains Pfam profile PF00293: NUDIX domain 12 3 21 25 At5g13740 sugar transporter family protein contains Pfam profile PF00083: major facilitator superfamily protein 12 3 22 1 At5g13790 floral homeotic protein AGL-15 (AGL15) 12 3 22 2 At5g13960 "SET domain-containing protein (SUVH4) identical to SUVH4 [Arabidopsis thaliana] GI:13517749; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH4 (SUVH4) GI:13517748" 12 3 22 3 At5g14010 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 12 3 22 4 At5g16770 myb family transcription factor (MYB9) contains Pfam profile: PF00249 Myb-like DNA-binding domain 12 3 22 5 At5g16800 "GCN5-related N-acetyltransferase (GNAT) family protein very low similarity to SP|P39909 Spermine/spermidine acetyltransferase (EC 2.3.1.57) {Bacillus subtilis}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 12 3 22 6 At5g16960 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 12 3 22 7 At5g17010 sugar transporter family protein similar to D-xylose proton-symporter [Lactobacillus brevis] GI:2895856; contains Pfam profile PF00083: major facilitator superfamily protein 12 3 22 8 At5g17190 expressed protein similar to unknown protein (gb|AAF26109.1) 12 3 22 9 At5g17230 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase identical to GB:L25812; synonymous with geranylgeranyl-diphosphate geranylgeranyl transferase 12 3 22 10 At5g17400 "ADP, ATP carrier protein, mitochondrial, putative / ADP/ATP translocase, putative / adenine nucleotide translocator, putative similar to SWISS-PROT:Q09188 ADP,ATP carrier protein (ADP/ATP translocase) [Schizosaccharomyces pombe]; contains Pfam profile: PF00153 mitochondrial carrier protein" 12 3 22 11 At5g17450 "heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403" 12 3 22 12 At5g20020 Ras-related GTP-binding nuclear protein (RAN-2) identical to GTP-binding nuclear protein RAN-2 SP:P41917 from [Arabidopsis thaliana] 12 3 22 13 At5g20060 phospholipase/carboxylesterase family protein similar to lysophospholipase II [Mus musculus] GI:4589453; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 12 3 22 14 At5g20200 nucleoporin-related contains weak similarity to Nucleoporin NUP1 (Nuclear pore protein NUP1) (Swiss-Prot:P20676) [Saccharomyces cerevisiae] 12 3 22 15 At5g20270 "expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073)" 12 3 22 16 At5g20450 expressed protein weak similarity to myosin [Arabidopsis thaliana] GI:433663 12 3 22 17 At5g20510 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 12 3 22 18 At5g20670 expressed protein 12 3 22 19 At5g20720 "20 kDa chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20) identical to chloroplast 20 kDa chaperonin, chloroplast precursor (Protein Cpn21), chloroplast protein Cpn10, chloroplast chaperonin 10 (Ch-CPN10), SP|O65282 from [Arabidopsis thaliana]; identical to cDNA chaperonin 20 GI:14587372" 12 3 22 20 At5g24030 C4-dicarboxylate transporter/malic acid transport family protein weak similarity to SP|P25396 Tellurite resistance protein tehA. {Escherichia coli}; contains Pfam profile PF03595: C4-dicarboxylate transporter/malic acid transport protein 12 3 22 21 At5g24090 acidic endochitinase (CHIB1) identical to SP|P19172 Acidic endochitinase precursor (EC 3.2.1.14) {Arabidopsis thaliana} 12 3 22 22 At5g24240 "phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain, Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase" 12 3 22 23 At5g24290 integral membrane family protein contains Pfam domain PF01988: Integral membrane protein 12 3 22 24 At5g24400 glucosamine/galactosamine-6-phosphate isomerase family protein low similarity to SP|O95336 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) {Homo sapiens}; contains Pfam profile PF01182: Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase 12 3 22 25 At5g24460 expressed protein 12 3 23 1 At5g24620 "thaumatin-like protein, putative similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family" 12 3 23 2 At5g24670 cytidine/deoxycytidylate deaminase family protein similar to SP|Q9URQ3 tRNA-specific adenosine deaminase 3 (EC 3.5.4.-) (tRNA-specific adenosine-34 deaminase subunit TAD3) {Saccharomyces cerevisiae}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 12 3 23 3 At5g27610 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 3 23 4 At5g27670 "histone H2A, putative similar to histone H2A Lycopersicon esculentum SP|P25469, Pisum sativum SP|P25470, Petroselinum crispum SP|P19177; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 12 3 23 5 At5g27840 serine/threonine protein phosphatase PP1 isozyme 8 (TOPP8) identical to SP|O82734 Serine/threonine protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) {Arabidopsis thaliana} 12 3 23 6 At5g27890 expressed protein 12 3 23 7 At5g28060 "40S ribosomal protein S24 (RPS24B) 40S ribosomal protein S19, Cyanophora paradoxa, EMBL:CPA245654" 12 3 23 8 At5g28130 hypothetical protein 12 3 23 9 At5g28310 oxidoreductase-related low similarity to glyoxylate reductase from Thermococcus litoralis [gi:13515409] 12 3 23 10 At5g28380 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 3 23 11 At5g36290 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 12 3 23 12 At5g36710 expressed protein 12 3 23 13 At5g36910 thionin (THI2.2) identical to thionin [Arabidopsis thaliana] gi|1181533|gb|AAC41679 12 3 23 14 At5g36960 expressed protein ; expression supported by MPSS 12 3 23 15 At5g37140 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 12 3 23 16 At5g37190 COP1-interacting protein 4 (CIP4) similar to COP1-interacting protein 4 (CIP4) [Arabidopsis thaliana] GI:13160646; supporting cDNA gi|13160645|dbj|AB036832.1|; 12 3 23 17 At5g37380 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 12 3 23 18 At5g37410 "hypothetical protein contains Pfam PF04510: Family of unknown function (DUF577); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 12 3 23 19 At5g40290 metal-dependent phosphohydrolase HD domain-containing protein similar to SP|Q60710 Interferon-gamma inducible protein MG11 {Mus musculus}; contains Pfam profile PF01966: HD domain 12 3 23 20 At5g40350 myb family transcription factor (MYB24) similar to Myb26 GI:1841475 from [Pisum sativum] 12 3 23 21 At5g40530 expressed protein contains Pfam profile PF05148: Protein of unknown function (DUF691) 12 3 23 22 At5g40570 surfeit locus protein 2 family protein / SURF2 family protein contains Pfam profile PF05477: Surfeit locus protein 2 (SURF2) 12 3 23 23 At5g40710 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 3 23 24 At5g40770 prohibitin identical to prohibitin [Arabidopsis thaliana] GI:1946331 12 3 23 25 At5g40942 "ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative similar to ribonucleotide reductase R2 [Nicotiana tabacum] GI:1044912; contains Pfam profile PF00268: Ribonucleotide reductase, small chain" 12 3 24 1 At5g41000 oligopeptide transporter OPT family protein contains Pfam profile PF03169: OPT oligopeptide transporter protein 12 3 24 2 At5g43680 expressed protein 12 3 24 3 At5g43745 phosphotransferase-related similar to streptomycin-3'-phosphotransferase [Streptomyces griseus] GI:153164 12 3 24 4 At5g43910 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 12 3 24 5 At5g43960 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profiles PF02136: Nuclear transport factor 2 (NTF2) domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 12 3 24 6 At5g44110 ABC transporter family protein 12 3 24 7 At5g44160 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 3 24 8 At5g44313 hypothetical protein 12 3 24 9 At5g44350 ethylene-responsive nuclear protein -related contains weak similarity to ethylene-regulated nuclear protein ERT2 [Arabidopsis thaliana] gi|2765442|emb|CAA75349 12 3 24 10 At5g46890 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to proline-rich 14 kDa protein {Phaseolus vulgaris} GP|1420885; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 12 3 24 11 At5g46940 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 12 3 24 12 At5g47100 calcineurin B-like protein 9 (CBL9) identical to calcineurin B-like protein 9 (GI:5866279) and calcium-binding protein AtCBL9 (GI:16151825) [Arabidopsis thaliana]; similar to calcineurin B-like protein 1 (GI:3309082) [Arabidopsis thaliana] 12 3 24 13 At5g47160 YDG/SRA domain-containing protein low similarity to nuclear protein np95 [Mus musculus] GI:4220590; contains Pfam profile PF02182: YDG/SRA domain 12 3 24 14 At5g47320 "30S ribosomal protein S19, mitochondrial (RPS19) " 12 3 24 15 At5g47380 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 12 3 24 16 At5g47480 expressed protein 12 3 24 17 At5g47540 Mo25 family protein similar to MO25 protein (early mouse development protein family) [Mouse] SWISS-PROT:Q06138 12 3 24 18 At5g50190 hypothetical protein similar to unknown protein (pir||T08985) 12 3 24 19 At5g50230 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to TIPD PROTEIN (SP:O15736)[Dictyostelium discoideum] 12 3 24 20 At5g50390 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 12 3 24 21 At5g50450 zinc finger (MYND type) family protein contains Pfam profile PF01753: MYND finger 12 3 24 22 At5g50630 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 12 3 24 23 At5g50700 "short-chain dehydrogenase/reductase (SDR) family protein contains oxidoreductase, short chain dehydrogenase/reductase family domain, Pfam:PF00106" 12 3 24 24 At5g50870 "ubiquitin-conjugating enzyme, putative strong similarity to ubiquitin conjugating enzyme [Lycopersicon esculentum] GI:886679; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 12 3 24 25 At5g50915 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 3 25 1 At5g53670 hypothetical protein similar to unknown protein (pir |T17429) 12 3 25 2 At5g53730 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum]; 12 3 25 3 At5g53880 expressed protein 12 3 25 4 At5g53920 ribosomal protein L11 methyltransferase-related similar to ribosomal protein L11 methyltransferase; PrmA [Escherichia coli] GI:455655 12 3 25 5 At5g54080 "homogentisate 1,2-dioxygenase / homogentisicase/homogentisate oxygenase / homogentisic acid oxidase (HGO) identical to SP|Q9ZRA2 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) {Arabidopsis thaliana}; contains Pfam profile PF04209: homogentisate 1,2-dioxygenase" 12 3 25 6 At5g54120 expressed protein 12 3 25 7 At5g54290 cytochrome c biogenesis protein family low similarity to cytochrome c biogenesis protein CcdA [Paracoccus pantotrophus] GI:11095328; contains Pfam profile PF02683: Cytochrome C biogenesis protein transmembrane region 12 3 25 8 At5g54350 expressed protein ; expression supported by MPSS 12 3 25 9 At5g57050 protein phosphatase 2C ABI2 / PP2C ABI2 / abscisic acid-insensitive 2 (ABI2) identical to SP|O04719 Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2) {Arabidopsis thaliana} 12 3 25 10 At5g57100 "transporter-related low similarity to GDP-fucose transporter [Caenorhabditis elegans] GI:13940504, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 12 3 25 11 At5g57220 "cytochrome P450, putative similar to Cytochrome P450 (SP:O65790) [Arabidopsis thaliana]; Cytochrome P450 (GI:7415996) [Lotus japonicus]" 12 3 25 12 At5g57290 60S acidic ribosomal protein P3 (RPP3B) 12 3 25 13 At5g57450 DNA repair family protein contains similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3 (X-ray repair cross-complementing protein 3) [Homo sapiens] 12 3 25 14 At5g57500 expressed protein 12 3 25 15 At5g57655 xylose isomerase family protein contains similarity to Xylose isomerase (EC 5.3.1.5) (Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus] 12 3 25 16 At5g57685 expressed protein 12 3 25 17 At5g60240 expressed protein 12 3 25 18 At5g60300 "lectin protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain and PF00139: Legume lectins beta domain" 12 3 25 19 At5g60440 MADS-box protein (AGL62) contains Pfal profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 12 3 25 20 At5g60500 "undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein contains putative undecaprenyl diphosphate synthase domain [PF01255]; similar to S. cerevisiae dehydrodolichyl diphosphate synthetase (DEDOL-PP synthase)(Rer2)[SP|P35196], a cis-prenyltransferase" 12 3 25 21 At5g60640 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 12 3 25 22 At5g60690 homeodomain-leucine zipper protein Revoluta (REV) / fascicular fiberless 1 (IFL1) identical to HD-zip transcription factor Revoluta (GI:9759333) {Arabidopsis thaliana}; contains Pfam profiles PF01852: START domain and PF00046: Homeobox domain 12 3 25 23 At5g60870 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 12 3 25 24 At5g60910 "agamous-like MADS box protein AGL8 / FRUITFULL (AGL8) NAP1-1, Nicotiana tabacum, EMBL:AF009126; identical to SP:Q38876 Agamous-like MADS box protein AGL8 (Floral homeotic protein AGL8) (FRUITFULL){Arabidopsis thaliana} PMID:9502732, PMID:10648231; identical to cDNA agamous-like 8 (AGL8) GI:1004364" 12 3 25 25 At5g63600 "flavonol synthase, putative similar to SP|Q96330; contains Pfam profile PF03171: 2OG-Fe(II) oxygenase superfamily" 12 3 26 1 At5g63660 "plant defensin-fusion protein, putative (PDF2.5) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)" 12 3 26 2 At5g63840 "alpha-glucosidase, putative similar to alpha-glucosidase GI:2648032 from [Solanum tuberosum]" 12 3 26 3 At5g63890 "histidinol dehydrogenase, putative / HDH, putative strong similarity to SP|P24226 Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) {Brassica oleracea var.capitata}; contains Pfam profile PF00815: histidinol dehydrogenase" 12 3 26 4 At5g64040 "photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) SP:P49107; Plant Physiol. 109 (3), 1126 (1995); similar to SP|P31093 Photosystem I reaction centre subunit N, chloroplast precursor (PSI- N) {Hordeum vulgare}" 12 3 26 5 At5g64090 expressed protein 12 3 26 6 At5g64240 latex-abundant family protein (AMC3) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 12 3 26 7 At5g64290 "oxoglutarate/malate translocator, putative similar to SWISS-PROT:Q41364 2-oxoglutarate/malate translocator, chloroplast precursor. [Spinach]{Spinacia oleracea}" 12 3 26 8 At5g66710 "protein kinase, putative similar to protein kinase ATN1 GP|1054633 [Arabidopsis thaliana]" 12 3 26 9 At5g66750 "SNF2 domain-containing protein / helicase domain-containing protein similar to proliferation-associated SNF2-like protein [Homo sapiens] GI:8980660; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 12 3 26 10 At5g66920 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 12 3 26 11 At5g66960 "prolyl oligopeptidase family protein similar to OpdB [Treponema denticola] GI:13786054; contains Pfam profiles PF00326: prolyl oligopeptidase family, PF02897: Prolyl oligopeptidase, N-terminal beta-propeller domain" 12 3 26 12 At5g67120 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 3 26 13 At5g67170 "SEC-C motif-containing protein / OTU-like cysteine protease family protein contains Pfam profiles PF02338: OTU-like cysteine protease, PF02810: SEC-C motif" 12 3 26 14 At5g67330 "NRAMP metal ion transporter 4 (NRAMP4) identical to metal transporter Nramp4 [Arabidopsis thaliana] gi|6468014|gb|AAF13279; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 12 3 26 15 At5g67385 "phototropic-responsive protein, putative similar to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 12 3 26 16 At3g42730 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300" 12 3 26 17 At3g42786 hypothetical protein 12 3 26 18 At3g43100 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 12 3 26 19 At3g43160 "expressed protein merozoite surface protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum" 12 3 26 20 At3g43370 "hypothetical protein similar to At2g14780, At1g34710, At1g27810, At3g42760, At1g25784, At4g08890" 12 3 26 21 At3g43430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 3 26 22 At3g43590 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 12 3 26 23 At3g43680 hypothetical protein 12 3 26 24 Blank Blank 12 3 26 25 Blank Blank 12 4 1 1 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 12 4 1 2 atc06 Randomly generated negative control 12 4 1 3 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 12 4 1 4 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 12 4 1 5 Alien2 Control: Stratagene Spotreport Alien Oligo 12 4 1 6 Alien8 Control: Stratagene Spotreport Alien Oligo 12 4 1 7 atc04 Randomly generated negative control 12 4 1 8 atc10 Randomly generated negative control 12 4 1 9 At1g03550 "secretory carrier membrane protein (SCAMP) family protein contains Pfam domain, PF04144: SCAMP family" 12 4 1 10 At1g03630 "protochlorophyllide reductase C, chloroplast / PCR C / NADPH-protochlorophyllide oxidoreductase C (PORC) identical to SP:O48741 protochlorophyllide reductase C, chloroplast precursor (EC 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) [Arabidopsis thaliana]" 12 4 1 11 At1g03780 targeting protein-related similar to microtubule-associated protein / targeting protein for Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to Restricted expression proliferation associated protein 100 (p100) (Differentially expressed in lung cells 2) (DIL-2) (Targeting protein for Xklp2) (C20orf1 protein) (C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo sapiens} 12 4 1 12 At1g03840 "zinc finger (C2H2 type) family protein contains Zinc finger,C2H2 type,domain contains Pfam domain, PF00096: Zinc finger, C2H2 type" 12 4 1 13 At1g03960 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 12 4 1 14 At1g04020 "zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 12 4 1 15 At1g04180 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana; contains Pfam profile PF00743" 12 4 1 16 At1g04240 auxin-responsive protein / indoleacetic acid-induced protein 3 (IAA3) identical to SP|Q38822 Auxin-responsive protein IAA3 (Indoleacetic acid-induced protein 3) {Arabidopsis thaliana}; EST gb|T04296 comes from this gene 12 4 1 17 At1g06900 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain; similar to insulin-degrading enzyme (Insulysin, Insulinase, Insulin protease) [Mouse] SWISS-PROT:Q9JHR7" 12 4 1 18 At1g06960 "small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative non-consensus splice donor GC at exon 4; similar to spliceosomal protein (U2B) GI:169588 from [Solanum tuberosum]" 12 4 1 19 At1g07120 expressed protein 12 4 1 20 At1g07170 expressed protein contains Pfam domain PF03660: Uncharacterised protein family (UPF0123) 12 4 1 21 At1g07330 hypothetical protein 12 4 1 22 At1g07370 "proliferating cell nuclear antigen 1 (PCNA1) identical to SP|Q9M7Q7 Proliferating cellular nuclear antigen 1 (PCNA 1) {Arabidopsis thaliana}; nearly identical to SP|Q43124 Proliferating cell nuclear antigen (PCNA) {Brassica napus}; contains Pfam profiles PF00705: Proliferating cell nuclear antigen N-terminal domain, PF02747: Proliferating cell nuclear antigen C-terminal domain" 12 4 1 23 At1g07490 expressed protein 12 4 1 24 At1g07550 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 12 4 1 25 At1g10030 integral membrane family protein contains Pfam PF03694: Erg28 like protein 12 4 2 1 At1g10070 "branched-chain amino acid aminotransferase 2 / branched-chain amino acid transaminase 2 (BCAT2) identical to SP|Q9M439 Branched-chain amino acid aminotransferase 2, chloroplast precursor (EC 2.6.1.42) (Atbcat-2) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 12 4 2 2 At1g10250 expressed protein weak similarity to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210 12 4 2 3 At1g10320 U2 snRNP auxiliary factor-related similar to U2 small nuclear ribonucleoprotein auxiliary factor 35 kD subunit related protein 1 (sp|Q15695) 12 4 2 4 At1g10470 two-component responsive regulator / response regulator 4 (ARR4) identical to responce regulator1 GI:3273195 from [Arabidopsis thaliana]; identical to cDNA ARR4 mRNA for response regulator 4 GI:3953596 12 4 2 5 At1g10522 expressed protein 12 4 2 6 At1g10660 expressed protein 12 4 2 7 At1g10670 expressed protein 12 4 2 8 At1g13380 expressed protein 12 4 2 9 At1g13430 sulfotransferase family protein similar to steroid sulfotransferase 3 GI:3420008 from (Brassica napus); contains Pfam profile PF00685: Sulfotransferase domain 12 4 2 10 At1g13600 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 12 4 2 11 At1g13650 expressed protein 12 4 2 12 At1g13870 expressed protein similar to KTI12 protein (SP:P34253) {Saccharomyces cerevisiae}; contains Prosite PS00070: Aldehyde dehydrogenases cysteine active site 12 4 2 13 At1g13930 expressed protein weakly similar to drought-induced protein SDi-6 (PIR:S71562) common sunflower (fragment) 12 4 2 14 At1g14120 "2-oxoglutarate-dependent dioxygenase, putative similar to adventitious rooting related oxygenase ARRO-1 from Malus x domestica, gi|3492806; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 12 4 2 15 At1g14160 "integral membrane family protein location of EST 168K9XP 3', gb|AA651045; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588)" 12 4 2 16 At1g16770 hypothetical protein 12 4 2 17 At1g16830 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 2 18 At1g16940 F-box family protein contains F-box domain Pfam:PF00646 12 4 2 19 At1g17010 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase [Petunia x hybrida][GI:311658], [Solanum tuberosum][GI:1039356]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 12 4 2 20 At1g17180 "glutathione S-transferase, putative Second of three repeated putative glutathione transferases. 72% identical to glutathione transferase [Arabidopsis thaliana] (gi|4006934). Location of ests 191A10T7 (gb|R90188) and 171N13T7 (gb|R65532)" 12 4 2 21 At1g17240 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 12 4 2 22 At1g17410 nucleoside diphosphate kinase family protein contains Pfam PF00334 : Nucleoside diphosphate kinase domain; similar to Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5) (Testis-specific nm23 homolog) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens} 12 4 2 23 At1g17460 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain 12 4 2 24 At1g20360 F-box protein-related contains weak hit to Pfam profile PF00646: F-box domain 12 4 2 25 At1g20440 dehydrin (COR47) identical to dehydrin COR47 (Cold-induced COR47 protein) [Arabidopsis thaliana] SWISS-PROT:P31168 12 4 3 1 At1g20575 "dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative similar to DPM1 from Homo sapiens [SP|O60762]; member of glycosyltransferase family 2" 12 4 3 2 At1g20620 "catalase 3 (SEN2) almost identical to catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis thaliana]; identical to catalase 3 (SEN2) mRNA, partial cds GI:3158369" 12 4 3 3 At1g20780 armadillo/beta-catenin repeat protein-related / U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 12 4 3 4 At1g20823 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 12 4 3 5 At1g20990 "DC1 domain-containing protein contains Pfam PF03107: DC1 domain; contains weak hit to Pfam PF00569: Zinc finger, ZZ type" 12 4 3 6 At1g21060 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 12 4 3 7 At1g23720 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 4 3 8 At1g23780 F-box family protein contains Pfam PF00646: F-box domain; similar to SP:Q9Y3I1 F-box only protein 7 {Homo sapiens}; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 12 4 3 9 At1g23910 hypothetical protein 12 4 3 10 At1g23970 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 12 4 3 11 At1g24130 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400);similar to beta transducin-like protein HET-D2Y (GI:17225210) [Podospora anserina]. 12 4 3 12 At1g24180 "pyruvate dehydrogenase E1 component alpha subunit, mitochondrial, putative similar to SP|P52901 Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) {Arabidopsis thaliana}; contains Pfam profile PF00676: Dehydrogenase E1 component" 12 4 3 13 At1g24310 expressed protein 12 4 3 14 At1g24370 "hypothetical protein contains Pfam profiles PF04776: Protein of unknown function (DUF626), PF04827: Protein of unknown function (DUF635)" 12 4 3 15 At1g28090 polynucleotide adenylyltransferase family protein low similarity to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 12 4 3 16 At1g28120 expressed protein 12 4 3 17 At1g28270 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 12 4 3 18 At1g28327 hypothetical protein 12 4 3 19 At1g28420 "homeobox transcription factor, putative similar to homeobox transcription factor Hox7 GI:19486 [Lycopersicon peruvianum]" 12 4 3 20 At1g28480 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 12 4 3 21 At1g28610 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif" 12 4 3 22 At1g28660 "lipase, putative strong similarity to lipase [Arabidopsis thaliana] GI:1145627" 12 4 3 23 At1g31817 "chloroplast 30S ribosomal protein S11, putative contains Pfam profile: PF00411: Ribosomal protein S11" 12 4 3 24 At1g31860 "histidine biosynthesis bifunctional protein (HISIE) identical to histidine biosynthesis bifunctional protein hisIE, chloroplast [precursor] SP: O82768 from [Arabidopsis thaliana]; identical to cDNA phosphoribosyl-ATP pyrophosphohydrolase GI:3461883" 12 4 3 25 At1g32060 "phosphoribulokinase (PRK) / phosphopentokinase nearly identical to SP|P25697 Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKASE) (PRK) {Arabidopsis thaliana}" 12 4 4 1 At1g32130 IWS1 C-terminus family protein contains Pfam PF05909: IWS1 C-terminus; 12 4 4 2 At1g32290 hypothetical protein 12 4 4 3 At1g32350 "alternative oxidase, putative similar to Alternative oxidase 1a, mitochondrial precursor from Arabidopsis thaliana [SP|Q39219], alternative oxidase 2, mitochondrial precursor from Nicotiana tabacum [SP|Q40578]; contains Pfam profile PF01786 Alternative oxidase" 12 4 4 4 At1g32450 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 12 4 4 5 At1g32510 no apical meristem (NAM) protein-related similar to NAM family protein TIGR_Ath1:At1g64105 [Arabidopsis thaliana] 12 4 4 6 At1g36100 myosin heavy chain-related similar to hypothetical protein GI:4263830 from [Arabidopsis thaliana] (similar to MYOSIN HEAVY CHAIN [Encephalitozoon cuniculi] GI:19074177) (similar to MYOSIN HEAVY CHAIN [Encephalitozoon cuniculi] GI:19074177) 12 4 4 7 At1g36280 "adenylosuccinate lyase, putative / adenylosuccinase, putative similar to SP|P25739 Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) {Escherichia coli}; contains Pfam profile PF00206: Lyase" 12 4 4 8 At1g36756 hypothetical protein 12 4 4 9 At1g36960 hypothetical protein 12 4 4 10 At1g38131 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 12 4 4 11 At1g39430 "hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250" 12 4 4 12 At1g41880 60S ribosomal protein L35a (RPL35aB) identical to GB:CAB81600 from [Arabidopsis thaliana] 12 4 4 13 At1g42367 hypothetical protein 12 4 4 14 At1g48300 expressed protein 12 4 4 15 At1g48360 expressed protein ; expression supported by MPSS 12 4 4 16 At1g48530 hypothetical protein 12 4 4 17 At1g48590 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 12 4 4 18 At1g48740 expressed protein 12 4 4 19 At1g48790 mov34 family protein similar to AMSH [Homo sapiens] GI:4098124; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 12 4 4 20 At1g48980 hypothetical protein 12 4 4 21 At1g49030 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 12 4 4 22 At1g51990 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase GI:5031492 from [Ocimum basilicum], [SP|Q00763] [Populus tremuloides]" 12 4 4 23 At1g52070 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 12 4 4 24 At1g52240 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 12 4 4 25 At1g52300 60S ribosomal protein L37 (RPL37B) similar to SP:Q43292 from [Arabidopsis thaliana] 12 4 5 1 At1g52430 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 12 4 5 2 At1g52490 F-box family protein contains F-box domain Pfam:PF00646 12 4 5 3 At1g52640 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 5 4 At1g52695 phospholipase/carboxylesterase family protein contains Pfam profile: PF02230 phospholipase/carboxylesterase; supported by full length cDNA gi:26450919 from [Arabidopsis thaliana] 12 4 5 5 At1g55350 "calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659" 12 4 5 6 At1g55380 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 4 5 7 At1g55535 expressed protein 12 4 5 8 At1g55580 scarecrow transcription factor family protein contains Pfam profile PF03514: GRAS family transcription factor 12 4 5 9 At1g55740 "alkaline alpha galactosidase, putative similar to alkaline alpha galactosidase I [Cucumis melo] GI:29838629; contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1" 12 4 5 10 At1g55800 hypothetical protein 12 4 5 11 At1g55940 "cytochrome P450, putative similar to SP:Q42569 from [Arabidopsis thaliana]" 12 4 5 12 At1g56000 "amine oxidase-related contains Pfam profile PF01593: amine oxidase, flavin-containing" 12 4 5 13 At1g60670 "expressed protein contains similarity to D-ala,D-ala ligase GI:6634594 from [Streptococcus pneumoniae]" 12 4 5 14 At1g60730 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 12 4 5 15 At1g60900 "U2 snRNP auxiliary factor large subunit, putative similar to U2 snRNP auxiliary factor, large subunit GB:CAA77136 from [Nicotiana plumbaginifolia]" 12 4 5 16 At1g60960 "metal transporter, putative (IRT3) identical to putative metal transporter IRT3 [Arabidopsis thaliana] gi|17385796|gb|AAL38438; similar to iron-regulated transporter 1 [Lycopersicon esculentum] gi|9716481|gb|AAF97509; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 12 4 5 17 At1g61097 Expressed protein 12 4 5 18 At1g61140 "SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related similar to ATPase [Homo sapiens] GI:531196; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 12 4 5 19 At1g61320 hypothetical protein 12 4 5 20 At1g61380 "S-locus protein kinase, putative similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954" 12 4 5 21 At1g64130 hypothetical protein similar to hypothetical protein GB:AAF24579 GI:6692114 from [Arabidopsis thaliana] 12 4 5 22 At1g64185 lactoylglutathione lyase family protein / glyoxalase I family protein contains Pfam domain PF00903: glyoxalase family protein 12 4 5 23 At1g64355 expressed protein 12 4 5 24 At1g64400 "long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative similar to GI:1617270 (MF7P) from [Brassica napus]" 12 4 5 25 At1g64580 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 12 4 6 1 At1g64630 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719; contains serine/threonine protein kinases active-site signature, PROSITE:PS00108" 12 4 6 2 At1g64800 expressed protein ; expression supported by MPSS 12 4 6 3 At1g64860 "RNA polymerase sigma subunit SigA (sigA) / sigma factor 1 (SIG1) identical to sigma factor SigA [Arabidopsis thaliana] GI:5478439, sigma factor 1 [Arabidopsis thaliana] GI:2353171, plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] GI:2398851; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 12 4 6 4 At1g67660 expressed protein 12 4 6 5 At1g67700 expressed protein 12 4 6 6 At1g67850 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 12 4 6 7 At1g67870 glycine-rich protein contains non-consensus GG donor splice site at exon2; modeled to est match. 12 4 6 8 At1g68020 "glycosyl transferase family 20 protein / trehalose-phosphatase family protein similar to SP|Q00764 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit (EC 2.4.1.15) (Trehalose-6-phosphate synthase) {Saccharomyces cerevisiae}; contains Pfam profile: PF02358 trehalose-phosphatase" 12 4 6 9 At1g68060 expressed protein 12 4 6 10 At1g68230 reticulon family protein (RTNLB14) contains Pfam profile PF02453: Reticulon 12 4 6 11 At1g68290 "bifunctional nuclease, putative similar to bifunctional nuclease [Zinnia elegans] gi|4099833|gb|AAD00694" 12 4 6 12 At1g70950 expressed protein 12 4 6 13 At1g71000 "DNAJ heat shock N-terminal domain-containing protein similar to SP|O35723 DnaJ homolog subfamily B member 3 Mus musculus, SP|Q9QYI7 DnaJ homolog subfamily B member 8 Mus musculus; contains Pfam profile PF00226 DnaJ domain" 12 4 6 14 At1g71170 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein contains Pfam profile: PF03446 NAD binding domain of 6-phosphogluconate 12 4 6 15 At1g71230 "COP9 signalosome subunit 5A / CSN subunit 5A (CSN5A) / c-JUN coactivator protein AJH2, putative (AJH2) COP9 complex subunit CSN5-2; identical to c-Jun coactivator protein AJH2 GI:3641312 from [Arabidopsis thaliana]; identical to cDNA CSN complex subunit 5A (CSN5A) GI:18056660; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 12 4 6 16 At1g71380 glycosyl hydrolase family 9 protein similar to beta-glucanase GB:AAB72171 12 4 6 17 At1g71440 "tubulin folding cofactor E / Pfifferling (PFI) almost identical to tubulin folding cofactor E (Pfifferling; PFI) GI:20514267 from [Arabidopsis thaliana]; identical to cDNA tubulin folding cofactor E, GI:20514266" 12 4 6 18 At1g71696 "carboxypeptidase D, putative similar to carboxypeptidase D [Anas platyrhynchos] gi|2789654|gb|AAB96915" 12 4 6 19 At1g71740 hypothetical protein 12 4 6 20 At1g74480 RWP-RK domain-containing protein contains Pfam profile: PF02042 RWP-RK domain 12 4 6 21 At1g74530 expressed protein 12 4 6 22 At1g74720 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 12 4 6 23 At1g74780 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 12 4 6 24 At1g74950 expressed protein 12 4 6 25 At1g75010 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related low similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 12 4 7 1 At1g75180 expressed protein 12 4 7 2 At1g75230 HhH-GPD base excision DNA repair family protein contains Pfam domain PF00730: HhH-GPD superfamily base excision DNA repair protein 12 4 7 3 AT5G57480 PC-1 D01 12 4 7 4 3XSSC PC-1 D13 12 4 7 5 AT1G29930 PC-1 H01 12 4 7 6 3XSSC PC-1 H13 12 4 7 7 AT3G44150 PC-1 L01 12 4 7 8 3XSSC PC-1 L13 12 4 7 9 AT4G00810 PC-1 P01 12 4 7 10 3XSSC PC-1 P13 12 4 7 11 At1g77950 MADS-box family protein similar to MADS box transcription factor GI:1905943 from [Sorghum bicolor] 12 4 7 12 At1g78010 "tRNA modification GTPase, putative similar to tRNA modification GTPase trmE [strain PCC 7120, Anabaena sp.] SWISS-PROT:Q8YN91" 12 4 7 13 At1g78180 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 12 4 7 14 At1g78220 14-3-3 protein GF14 pi (GRF13) similar to GF14 epsilon isoform GI:1022778 from [Arabidopsis thaliana]; contains Pfam profile: PF00244 14-3-3 proteins 12 4 7 15 At1g78400 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to exopolygalacturonase GI:311962 from [Arabidopsis thaliana]; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 12 4 7 16 At1g78460 SOUL heme-binding family protein weak similarity to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 12 4 7 17 At1g78620 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 12 4 7 18 At1g78660 "gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana}" 12 4 7 19 At2g01240 reticulon family protein (RTNLB15) contains PFam profile PF02453: Reticulon 12 4 7 20 At2g01275 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 12 4 7 21 At2g01420 "auxin transport protein, putative similar to auxin transport protein PIN7[Arabidopsis thaliana] gi|5817305|gb|AAD52697" 12 4 7 22 At2g01480 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'axi 1 protein from Nicotiana tabacum -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 12 4 7 23 At2g01660 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 12 4 7 24 At2g01700 hypothetical protein 12 4 7 25 At2g01870 expressed protein 12 4 8 1 At2g01920 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis] 12 4 8 2 At2g05090 "hypothetical protein includes At5g37080, At5g37170, At2g05090" 12 4 8 3 At2g05180 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max} 12 4 8 4 At2g05410 ubiquitin-specific protease-related / meprin and TRAF homology (MATH) domain-containing protein-related similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; supported by tandem duplication of meprin and TRAF homology (MATH) domain protein (GI:4914358) (TIGR_Ath1:At2g05420) [Arabidopsis thaliana] 12 4 8 5 At2g05480 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330; contains a non-consensus TA acceptor splice site. This may be a pseudogene." 12 4 8 6 At2g05710 "aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative nearly identical to SP|P49608 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Cucurbita maxima}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain" 12 4 8 7 At2g05790 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 12 4 8 8 At2g05990 "enoyl-[acyl-carrier protein] reductase [NADH], chloroplast, putative / NADH-dependent enoyl-ACP reductase, putative strong similarity to enoyl-[acyl-carrier protein] reductase [NADH] SP:P80030 from [Brassica napus]" 12 4 8 9 At2g06005 expressed protein 12 4 8 10 At2g14130 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g32840, At4g04010, At2g06430, At2g15140, At2g04980, At3g44500, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 12 4 8 11 At2g14247 Expressed protein 12 4 8 12 At2g14560 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 12 4 8 13 At2g14600 hypothetical protein 12 4 8 14 At2g14774 hypothetical protein 12 4 8 15 At2g14830 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 12 4 8 16 At2g15000 expressed protein 12 4 8 17 At2g15050 "lipid transfer protein, putative similar to SP|Q42641 nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) {Brassica oleracea}; contains Pfam Protease inhibitor/seed storage/LTP family domain PF00234" 12 4 8 18 At2g18080 serine carboxypeptidase S28 family protein similar to SP|Q9NQE7 Thymus-specific serine protease precursor (EC 3.4.-.-) {Homo sapiens}; contains Pfam profile PF05577: Serine carboxypeptidase S28 12 4 8 19 At2g18140 "peroxidase, putative similar to peroxidase ATP6a [Arabidopsis thaliana] gi|1429215|emb|CAA67310" 12 4 8 20 At2g18270 expressed protein 12 4 8 21 At2g18320 hypothetical protein 12 4 8 22 At2g18480 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 12 4 8 23 At2g18540 cupin family protein contains Pfam profile PF00190: Cupin 12 4 8 24 At2g18730 "diacylglycerol kinase, putative contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 12 4 8 25 At2g18790 phytochrome B (PHYB) Identical to SP|P14713 Phytochrome B {Arabidopsis thaliana} 12 4 9 1 At2g21440 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 12 4 9 2 At2g21500 expressed protein 12 4 9 3 At2g21660 glycine-rich RNA-binding protein (GRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arabidopsis thaliana} 12 4 9 4 At2g21740 hypothetical protein 12 4 9 5 At2g21910 "cytochrome P450, putative " 12 4 9 6 At2g21950 SKP1 interacting partner 6 (SKIP6) identical to SKP1 interacting partner 6 GI:10716957 from [Arabidopsis thaliana] 12 4 9 7 At2g22125 C2 domain-containing protein contains Pfam profile PF00168: C2 domain 12 4 9 8 At2g22200 AP2 domain-containing transcription factor AP2 domain transcription factor (GP:4567204) {Arabidopsis thaliana} 12 4 9 9 At2g25100 ribonuclease HII family protein contains Pfam profile: PF01351 ribonuclease HII 12 4 9 10 At2g25160 "cytochrome P450, putative similar to cytochrome p450(CYP82C1p) GI:2739004 from [Glycine max]" 12 4 9 11 At2g25330 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 12 4 9 12 At2g25380 zinc finger protein-related very low similarity to SP|O95376 Ariadne-2 protein homolog (ARI-2) (Triad1 protein) {Homo sapiens}; contains Pfam profile PF01485: IBR (In Between Ring fingers) domain 12 4 9 13 At2g25580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 9 14 At2g25625 expressed protein 12 4 9 15 At2g25760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 9 16 At2g25810 "tonoplast intrinsic protein, putative similar to tonoplast intrinsic protein GI:4584429 from [Nicotiana tabacum]" 12 4 9 17 At2g28430 expressed protein 12 4 9 18 At2g28490 "cupin family protein similar to preproMP27-MP32 [Cucurbita cv. Kurokawa Amakuri] GI:691752, allergen Gly m Bd 28K [Glycine max] GI:12697782, vicilin [Matteuccia struthiopteris] GI:1019792; contains Pfam profile PF00190: Cupin" 12 4 9 19 At2g28630 beta-ketoacyl-CoA synthase family protein 12 4 9 20 At2g28690 expressed protein 12 4 9 21 At2g28860 cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae} 12 4 9 22 At2g28920 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 4 9 23 At2g29110 "glutamate receptor family protein (GLR2.8) (GLUR9) plant glutamate receptor family, PMID:11379626" 12 4 9 24 At2g29170 "short-chain dehydrogenase/reductase (SDR) family protein / tropinone reductase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 12 4 9 25 At2g31840 expressed protein 12 4 10 1 At2g31890 expressed protein 12 4 10 2 At2g32050 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] 12 4 10 3 At2g32090 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 12 4 10 4 At2g32250 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 12 4 10 5 At2g32295 EXS family protein / ERD1/XPR1/SYG1 family protein low similarity to xenotropic and polytropic murine leukemia virus receptor [Mustela vison] GI:6093316; contains Pfam profile PF03124: EXS family 12 4 10 6 At2g32470 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens] 12 4 10 7 At2g32510 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 10 8 At2g35090 hypothetical protein 12 4 10 9 At2g35150 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region 12 4 10 10 At2g35310 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 12 4 10 11 At2g35370 "glycine cleavage system H protein 1, mitochondrial (GDCSH) (GCDH) identical to SP|P25855 Glycine cleavage system H protein 1, mitochondrial precursor {Arabidopsis thaliana}" 12 4 10 12 At2g35540 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 12 4 10 13 At2g35600 expressed protein 12 4 10 14 At2g35710 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-2 from Homo sapiens [SP|O15488] 12 4 10 15 At2g35750 expressed protein 12 4 10 16 At2g38350 hypothetical protein 12 4 10 17 At2g38400 "alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative similar to SP|Q64565 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate aminotransferase) {Rattus norvegicus}; contains Pfam profile PF00202: aminotransferase, class III" 12 4 10 18 At2g38580 expressed protein ; expression supported by MPSS 12 4 10 19 At2g38640 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 12 4 10 20 At2g38810 "histone H2A, putative strong similarity to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 12 4 10 21 At2g38820 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 12 4 10 22 At2g38960 "endoplasmic reticulum oxidoreductin 1 (ERO1) family protein contains Pfam domain, PF04137: Endoplasmic Reticulum Oxidoreductin 1 (ERO1)" 12 4 10 23 At2g39000 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 12 4 10 24 At2g41530 "esterase, putative similar to SP|P10768 Esterase D (EC 3.1.1.1) {Homo sapiens}; contains Pfam profile: PF00756 putative esterase" 12 4 10 25 At2g41600 expressed protein 12 4 11 1 At2g41720 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 11 2 At2g41770 "expressed protein contains Pfam domain PF03385: Protein of unknown function, DUF288" 12 4 11 3 At2g41920 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 11 4 At2g41970 "protein kinase, putative similar to Pto kinase interactor 1 (serine/threonine protein kinase) [Lycopersicon esculentum] gi|3668069|gb|AAC61805" 12 4 11 5 At2g42130 expressed protein contains weak hit to Pfam PF04755: PAP_fibrillin 12 4 11 6 At2g42180 expressed protein 12 4 11 7 At2g44790 uclacyanin II strong similarity to uclacyanin II GI:3399769 from [Arabidopsis thaliana]; contains Pfam profile PF02298: Plastocyanin-like domain; identical to cDNA uclacyanin II GI:3399768 12 4 11 8 At2g44840 "ethylene-responsive element-binding protein, putative " 12 4 11 9 At2g44990 dioxygenase-related low similarity to carotenoid cleavage dioxygenase 1 [Arabidopsis thaliana] GI:3096910; contains Pfam profile PF03055: Retinal pigment epithelial membrane protein 12 4 11 10 At2g45040 matrix metalloproteinase nearly identical to metalloproteinase [Arabidopsis thaliana] GI:3128477; contains InterPro accession IPR001818: Matrixin 12 4 11 11 At2g45210 auxin-responsive protein-related weakly similar to small auxin up RNA (GI:546362) {Arabidopsis thaliana} 12 4 11 12 At2g45280 DNA repair family protein contains similarity to Swiss-Prot:O43502 DNA repair protein RAD51 homolog 3 [Homo sapiens] 12 4 11 13 At2g45470 fasciclin-like arabinogalactan-protein (FLA8) 12 4 11 14 At2g45530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 4 11 15 At2g48120 pale cress protein (PAC) identical to PAC [Arabidopsis thaliana] gi|1483213|emb|CAA65334 12 4 11 16 At2g16365 F-box family protein contains Pfam:PF00646 F-box domain 12 4 11 17 At3g01090 "Snf1-related protein kinase (KIN10) (SKIN10) identical to Snf1-related protein kinase, KIN10 SP:Q38997 from [Arabidopsis thaliana]" 12 4 11 18 At3g01160 expressed protein 12 4 11 19 At3g01311 hypothetical protein 12 4 11 20 At3g01350 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 12 4 11 21 At3g01500 "carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 (CA1) nearly identical to SP|P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana}" 12 4 11 22 At3g01530 myb family transcription factor (MYB57) contains PFAM profile: myb DNA binding domain PF00249 12 4 11 23 At3g04120 "glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GAPC) / NAD-dependent glyceraldehyde-3-phosphate dehydrogenase identical to SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}" 12 4 11 24 At3g04180 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin-like protein GER2 [SP|P92996], GLP2A [SP|P92999] [Arabidopsis thaliana]" 12 4 11 25 At3g04350 expressed protein 12 4 12 1 At3g04390 "xanthine dehydrogenase family protein similar to xanthine dehydrogenase from Bos taurus, GI:1620375" 12 4 12 2 At3g04570 "DNA-binding protein-related contains Pfam domain PF03479: Domain of unknown function (DUF296), found in AT-hook motifs Pfam:PF02178" 12 4 12 3 At3g04600 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 12 4 12 4 At3g04760 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 12 5 At3g04800 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 12 4 12 6 At3g07300 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|P49770 Translation initiation factor eIF-2B beta subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens}; contains Pfam profile PF01008: Initiation factor 2 subunit family 12 4 12 7 At3g07360 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 12 4 12 8 At3g07500 far-red impaired responsive family protein / FAR1 family protein weak similarity to far-red impaired response protein [Arabidopsis thaliana] GI:5764395; contains Pfam profile PF03101: FAR1 family 12 4 12 9 At3g07530 expressed protein ; expression supported by MPSS 12 4 12 10 At3g07690 NAD-dependent glycerol-3-phosphate dehydrogenase family protein weak similarity to SP|P46919 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) {Bacillus subtilis}; contains Pfam profile PF01210: NAD-dependent glycerol-3-phosphate dehydrogenase 12 4 12 11 At3g07740 transcriptional adaptor (ADA2a) identical to transcriptional adaptor ADA2a [Arabidopsis thaliana] gi|13591698|gb|AAK31319 12 4 12 12 At3g07880 Rho GDP-dissociation inhibitor family protein similar to SP|P52565 Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha) {Homo sapiens}; contains Pfam profile PF02115: RHO protein GDP dissociation inhibitor 12 4 12 13 At3g07930 HhH-GPD base excision DNA repair family protein 12 4 12 14 At3g10900 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872, (1-4)-beta-mannan endohydrolase GB:AAB87859 [Lycopersicon esculentum]; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 12 4 12 15 At3g10930 expressed protein 12 4 12 16 At3g11060 hypothetical protein 12 4 12 17 At3g11120 60S ribosomal protein L41 (RPL41E) identical to ribosomal protein L41 GB:AAA79268 [Pisum sativum] 12 4 12 18 At3g11290 expressed protein 12 4 12 19 At3g11340 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 4 12 20 At3g11470 4'-phosphopantetheinyl transferase family protein contains Pfam profile PF01648: 4'-phosphopantetheinyl transferase superfamily 12 4 12 21 At3g11530 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 12 4 12 22 At3g13900 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0], Mus musculus [SP|P70704]; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 12 4 12 23 At3g13960 expressed protein identical to transcription activator GRL5 [Arabidopsis thaliana] GI:21539888 (unpublished); supporting cDNA gi|21539887|gb|AY102638.1| 12 4 12 24 At3g14100 "oligouridylate-binding protein, putative similar to GB:CAB75429 (GI:6996560) from [Nicotiana plumbaginifolia], contains Pfam profiles: PF00076 RNA recognition motif (3 copies)" 12 4 12 25 At3g14120 expressed protein similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus norvegicus] 12 4 13 1 At3g14250 zinc finger protein-related contains weak similarity to zinc finger proteins and Pfam:PF01485 IBR domain 12 4 13 2 At3g14310 "pectinesterase family protein contains Pfam profiles: PF01095 pectinesterase, PF04043 plant invertase/pectin methylesterase inhibitor ;similar to pectin methylesterase GB:Q42534 from [Arabidopsis thaliana]" 12 4 13 3 At3g14460 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 12 4 13 4 At3g14520 terpene synthase/cyclase family protein similar to terpene synthase GB:CAA72074 from [Arabidopsis thaliana] 12 4 13 5 At3g17100 expressed protein 12 4 13 6 At3g17140 invertase inhibitor-related weak similarity to tomato invertase inhibitor [Lycopersicon esculentum] GI:3582002 12 4 13 7 At3g17265 F-box family protein 12 4 13 8 At3g17330 expressed protein contains Pfam profile PF04146: YT521-B-like family 12 4 13 9 At3g17490 "F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain and TIGRFAM TIGR01640: F-box protein interaction domain" 12 4 13 10 At3g17530 F-box family protein contains Pfam profile: PF00646 F-box domain 12 4 13 11 At3g17670 ferredoxin-related contains Pfam PF00515: TPR Domain; similar to ferredoxin PetF2 (GI:22651984) [Synechococcus sp. PCC 7002] 12 4 13 12 At3g17730 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to GRAB1 protein GB:CAA09371 [Triticum sp.] 12 4 13 13 At3g20370 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 12 4 13 14 At3g20430 expressed protein 12 4 13 15 At3g20600 "non-race specific disease resistance protein (NDR1) identical to non-race specific disease resistance protein (NDR1) GB:AF021346 [Arabidopsis thaliana] (Science 278 (5345), 1963-1965 (1997))" 12 4 13 16 At3g20660 "organic cation transporter family protein similar to organic cation transporter OCT3 [Rattus norvegicus] GI:3273722, organic cation transporter 3 [Mus musculus] GI:4454795; contains Pfam profile PF00083: major facilitator superfamily protein" 12 4 13 17 At3g20820 "leucine-rich repeat family protein contains similarity to Cf-2.1 [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779; contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 12 4 13 18 At3g20870 "metal transporter family protein contains ZIP Zinc transporter domain, Pfam:PF02535" 12 4 13 19 At3g21100 RNA recognition motif (RRM)-containing protein contains Pfam profile:PF00076 RNA recognition motif 12 4 13 20 At3g21160 "mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max][GI:6552504]" 12 4 13 21 At3g23830 "glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein 2, mitochondrial precursor (AtGRP2) (Swiss-Prot:Q9SVM8) [Arabidopsis thaliana]; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 12 4 13 22 At3g23890 "DNA topoisomerase, ATP-hydrolyzing / DNA topoisomerase II / DNA gyrase (TOP2) identical to SP|P30182 DNA topoisomerase II (EC 5.99.1.3) {Arabidopsis thaliana}" 12 4 13 23 At3g24065 expressed protein ; expression supported by MPSS 12 4 13 24 At3g24120 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 12 4 13 25 At3g24260 hypothetical protein 12 4 14 1 At3g24315 sec20 family protein contains Pfam PF03908: Sec20 12 4 14 2 At3g24503 aldehyde dehydrogenase (ALDH1a) identical to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana] gi|20530143|gb|AAM27004 12 4 14 3 At3g24530 "AAA-type ATPase family protein / ankyrin repeat family protein contains Pfam profiles: PF00023 ankyrin repeat, PF00004 ATPase family associated with various cellular activities (AAA)" 12 4 14 4 At3g27280 "prohibitin, putative strong similarity to prohibitin [Arabidopsis thaliana] GI:1946331; contains Pfam profile PF01145: SPFH domain / Band 7 family" 12 4 14 5 At3g27330 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles: PF00097 zinc finger, C3HC4 type (RING finger), PF01697 Domain of unknown function" 12 4 14 6 At3g27490 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 4 14 7 At3g27550 group II intron splicing factor CRS1-related contains weak similarity to CRS1 [Zea mays] gi|9837550|gb|AAG00595 12 4 14 8 At3g27730 "ATP-dependent DNA helicase, putative similar to SP|P51979 ATP-dependent DNA helicase MER3 (EC 3.6.1.-) {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF02889: Sec63 domain" 12 4 14 9 At3g27810 "myb family transcription factor (MYB3) (MYB21) contains Pfam profile: PF00249 myb-like DNA-binding domain ;identical to ATMYB3 GI:2280528 from [Arabidopsis thaliana]; identical to cDNA putative transcription factor (MYB21) mRNA, partial cds GI:3941431" 12 4 14 10 At3g27980 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 12 4 14 11 At3g28040 "leucine-rich repeat transmembrane protein kinase, putative contains Pfam profiles: PF00560 leucine rich repeat, PF00069 eukaryotic protein kinase domain" 12 4 14 12 At3g32190 hypothetical protein 12 4 14 13 At3g32394 hypothetical protein 12 4 14 14 At3g33293 hypothetical protein 12 4 14 15 At3g33448 hypothetical protein 12 4 14 16 At3g42190 hypothetical protein 12 4 14 17 At3g42310 hypothetical protein 12 4 14 18 At3g42520 hypothetical protein 12 4 14 19 At3g42570 peroxidase-related 12 4 14 20 At3g45680 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 12 4 14 21 At3g45740 "hydrolase family protein / HAD-superfamily protein contains TIGRfam domians TIGR01460: HAD-superfamily hydrolase, subfamily IIA and TIGR01456: HAD-superfamily subfamily IIA hydrolase, TIGR01456, CECR5" 12 4 14 22 At3g45900 expressed protein 12 4 14 23 At3g45960 "expansin family protein (EXPL3) contains Pfam profile: PF01357 pollen allergen; expansin-like gene, PMID:11641069, www.bio.psu.edu/expansins" 12 4 14 24 At3g46140 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 12 4 14 25 At3g46200 MutT/nudix family protein similar to head organizer protein P17F11 GI:17976973 from [Xenopus laevis]; contains a NUDIX hydrolase domain IPR000086 12 4 15 1 At3g46390 hypothetical protein 12 4 15 2 At3g46450 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to polyphosphoinositide binding protein Ssh1p (GI:|2739044) {Glycine max} 12 4 15 3 At3g49240 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 15 4 At3g49300 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 4 15 5 At3g49460 60S acidic ribosomal protein-related contains weak similarity to Swiss-Prot:52855 60S acidic ribosomal protein P1 (L12) [Zea mays] 12 4 15 6 At3g49520 F-box family protein contains weak hit to Pfam:PF00646 F-box domain and weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 12 4 15 7 At3g49700 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthases from Arabidopsis thaliana [GI:940370], Lycopersicon esculentum [GI:508609], Cucumis sativus [GI:3641649]" 12 4 15 8 At3g49760 bZIP transcription factor family protein similar to bZIP transcription factor GI:1769891 from [Arabidopsis thaliana] 12 4 15 9 At3g49940 LOB domain protein 38 / lateral organ boundaries domain protein 38 (LBD38) identical to SP|Q9SN23 LOB domain protein 38 {Arabidopsis thaliana} 12 4 15 10 At3g50000 "casein kinase II alpha chain 2 identical to casein kinase II, alpha chain 2 (CK II) [Arabidopsis thaliana] SWISS-PROT:Q08466" 12 4 15 11 At3g52700 "hypothetical protein teichoic acid biosynthesis gene TagB, Staphylococcus aureus, EMBL:SAU91741" 12 4 15 12 At3g52740 expressed protein 12 4 15 13 At3g52900 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 12 4 15 14 At3g52940 C-14 sterol reductase / delta(14)-sterol reductase / FACKEL (FK) identical to gi:9082182 12 4 15 15 At3g53100 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382) [Arabidopsis thaliana], SP|P40603 Anther-specific proline-rich protein APG {Brassica napus}; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 12 4 15 16 At3g53160 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 12 4 15 17 At3g53305 "cytochrome P450, putative very similar to Cytochrome P450 71B8 (SP:P58048) [Arabidopsis thaliana]" 12 4 15 18 At3g53350 "myosin heavy chain-related low similarity to filamin-interacting protein S-FILIP [Rattus norvegicus] GI:21392397, nonmuscle heavy chain myosin II-A [Mus musculus] GI:17978023" 12 4 15 19 At3g55950 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to cytokinin-regulated kinase 1 [Nicotiana tabacum] gi|10998537|gb|AAG25966" 12 4 15 20 At3g56010 expressed protein 12 4 15 21 At3g56170 Ca(2+)-dependent nuclease identical to Ca(2+)-dependent nuclease [Arabidopsis thaliana] GI:7684292; supporting cDNA gi|7684291|dbj|D84226.1| 12 4 15 22 At3g56230 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 12 4 15 23 At3g56410 expressed protein 12 4 15 24 At3g56470 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 12 4 15 25 At3g56650 "thylakoid lumenal 20 kDa protein SP:Q9L5; PMID:11719511; F22K20.16 - Arabidopsis thaliana, EMBL:AC002291;" 12 4 16 1 At3g56710 sigA-binding protein identical to SigA binding protein [Arabidopsis thaliana] gi|6980074|gb|AAF34713; contains Pfam PF05678: VQ motif 12 4 16 2 At3g59520 rhomboid family protein contains Pfam profile PF01694: Rhomboid family 12 4 16 3 At3g59590 jacalin lectin family protein similar to suppressor of nim1-1 [Arabidopsis thaliana] GI:22023774; contains Pfam profile PF01419: Jacalin-like lectin domain 12 4 16 4 At3g59760 "cysteine synthase, mitochondrial, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to SP|Q43725 Cysteine synthase, mitochondrial precursor (EC 4.2.99.8) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}" 12 4 16 5 At3g59800 expressed protein 12 4 16 6 At3g59960 SET domain-containing protein low similarity to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain 12 4 16 7 At3g60000 hypothetical protein contains Pfam profile: PF04484 family of unknown function (DUF566) 12 4 16 8 At3g60180 "uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP kinase) (Swiss-Prot:O04905) [Arabidopsis thaliana]" 12 4 16 9 At3g60230 hypothetical protein 12 4 16 10 At3g62950 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 12 4 16 11 At3g63010 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 12 4 16 12 At3g63190 "ribosome recycling factor, chloroplast, putative / ribosome releasing factor, chloroplast, putative similar to SP|P82231 Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) {Spinacia oleracea}; contains Pfam profile PF01765: ribosome recycling factor" 12 4 16 13 At3g63240 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 12 4 16 14 At3g63360 defensin-related contains weak similarity to defensin [Capsicum annuum] gi|1200228|emb|CAA65045 12 4 16 15 At3g63400 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9" 12 4 16 16 At4g00010 expressed protein 12 4 16 17 At4g00070 zinc finger protein-related contains similarity to zinc finger proteins (C3HC4-type RING finger) 12 4 16 18 At4g02430 "pre-mRNA splicing factor, putative / SR1 protein, putative strong similarity to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana}; cDNA NCBI_gi:15810292 supports a truncated version while protein evidence supports a longer model." 12 4 16 19 At4g02482 "chloroplast outer envelope GTP-binding protein, putative similar to GTP-binding protein (GI:576509) [Pisum sativum]; similar to chloroplast outer envelope protein 86 (GI:599958) [Pisum sativum]" 12 4 16 20 At4g02640 "bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor; identical to cDNA bZIP protein BZO2H1, alternatively spliced GI:10954094" 12 4 16 21 At4g02690 "hypothetical protein low similarity to N-methyl-D-aspartate receptor-associated protein [Drosophila melanogaster] GI:567104, NMDA receptor glutamate-binding subunit [Rattus sp.] GI:8248741; contains Pfam profile PF01027: Uncharacterized protein family UPF0005" 12 4 16 22 At4g02850 phenazine biosynthesis PhzC/PhzF family protein contains Pfam profile: PF02567 phenazine biosynthesis-like protein 12 4 16 23 At4g02910 hypothetical protein 12 4 16 24 At4g03080 "kelch repeat-containing serine/threonine phosphoesterase family protein contains Pfam profiles: PF00149 calcineurin-like phosphoesterase, PF01344 kelch motif" 12 4 16 25 At4g03115 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 12 4 17 1 At4g07800 hypothetical protein 12 4 17 2 At4g07944 hypothetical protein 12 4 17 3 At4g08170 "inositol 1,3,4-trisphosphate 5/6-kinase family protein similar to inositol phosphate kinase (GI:27549256) [Zea mays]; similar to inositol 1,3,4-trisphosphate 5/6-kinase (GI:3396079) [Arabidopsis thaliana]" 12 4 17 4 At4g08200 hypothetical protein 12 4 17 5 At4g08350 "KOW domain-containing transcription factor family protein chromatin structural protein homolog Supt5hp - Mus musculus,PID:g2754752" 12 4 17 6 At4g08400 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 12 4 17 7 At4g08590 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger C3HC4 type (RING finger), PF02182: YDG/SRA domain" 12 4 17 8 At4g08655 hypothetical protein 12 4 17 9 At4g11470 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 12 4 17 10 At4g11550 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 4 17 11 At4g11730 "ATPase, plasma membrane-type, putative / proton pump, putative similar to plasma membrane-type ATPase SP|P20431 and SP|P19456 {Arabidopsis thaliana}; contains InterPro accession IPR001757: ATPase, E1-E2 type" 12 4 17 12 At4g11780 hypothetical protein 12 4 17 13 At4g11950 hypothetical protein 12 4 17 14 At4g11990 "expressed protein hypothetical protein F7H19.40 - Arabidopsis thaliana, PID:e1310054" 12 4 17 15 At4g12150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 12 4 17 16 At4g12230 "esterase/lipase/thioesterase family protein low similarity to 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase; OhpC [Rhodococcus sp.] GI:8926386; contains Interpro entry IPR000379" 12 4 17 17 At4g14740 expressed protein 12 4 17 18 At4g14790 "ATP-dependent RNA helicase, mitochondrial (SUV3) identical to mitochondrial RNA helicase [Arabidopsis thaliana] GI:5823579; contains Pfam profile PF00271: Helicase conserved C-terminal domain" 12 4 17 19 At4g14930 "acid phosphatase survival protein SurE, putative similar to Swiss-Prot:P36664 acid phosphatase surE (EC 3.1.3.2) (Stationary-phase survival protein surE) [Escherichia coli O157:H7]; contains Pfam domain PF01975: Survival protein SurE" 12 4 17 20 At4g14965 cytochrome b5 domain-containing protein similar to SP|O15173 Membrane associated progesterone receptor component 2 (Steroid receptor protein DG6) {Homo sapiens}; contains Pfam profile PF00173: Heme/Steroid binding domain 12 4 17 21 At4g15096 hypothetical protein 12 4 17 22 At4g15150 glycine-rich protein 12 4 17 23 At4g15310 cytochrome P450-related contains weak similarity to Pfam profile: PF00067: Cytochrome P450 12 4 17 24 At4g15370 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase [gi:6650208] [PMID:11247608]" 12 4 17 25 At4g17830 "peptidase M20/M25/M40 family protein similar to acetylornithine deacetylase (Acetylornithinase, AO; N-acetylornithinase, NAO) [Dictyostelium discoideum] SWISS-PROT:P54638" 12 4 18 1 At4g17890 human Rev interacting-like family protein / hRIP family protein contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 12 4 18 2 At4g18030 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 12 4 18 3 At4g18080 hypothetical protein 12 4 18 4 At4g18260 "cytochrome B561-related related to cytochrome b-561 (GI:20345443) [Mus musculus]; multidrug resistance protein, Homo sapiens, PIR2:S71841" 12 4 18 5 At4g18320 hypothetical protein 12 4 18 6 At4g18425 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 12 4 18 7 At4g18465 "RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 12 4 18 8 At4g21250 expressed protein contains Pfam profile: PF01925 domain of unknown function DUF81 12 4 18 9 At4g21320 (2R)-phospho-3-sulfolactate synthase-related contains weak similarity to Swiss-Prot:Q57703 (2R)-phospho-3-sulfolactate synthase (PSL synthase) [Methanococcus jannaschii] 12 4 18 10 At4g21460 expressed protein 12 4 18 11 At4g21520 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to guanine nucleotide-binding protein beta 5 (GI:1001939) [Mesocricetus auratus] 12 4 18 12 At4g21670 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 12 4 18 13 At4g21720 expressed protein 12 4 18 14 At4g21880 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 18 15 At4g21930 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 12 4 18 16 At4g24470 "zinc finger (GATA type) protein ZIM (ZIM) identical to zinc-finger protein expressed in Inflorescence Meristem, ZIM gi:8918533 from [Arabidopsis thaliana]" 12 4 18 17 At4g24530 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'PsRT17-1 like protein' based on similarity to PsRT17-1 (GP:1778376) [Pisum sativum] which was based upon similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 12 4 18 18 At4g24680 expressed protein 12 4 18 19 At4g24730 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 12 4 18 20 At4g24900 expressed protein 12 4 18 21 At4g24960 ABA-responsive protein (HVA22d) identical to AtHVA22d [Arabidopsis thaliana] GI:4884938 12 4 18 22 At4g25110 latex-abundant family protein (AMC2) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 12 4 18 23 At4g25170 expressed protein 12 4 18 24 At4g27720 expressed protein contains Pfam PF05631: Protein of unknown function (DUF791) 12 4 18 25 At4g27790 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 12 4 19 1 At4g27930 hypothetical protein 12 4 19 2 At4g27980 expressed protein 12 4 19 3 At4g28130 diacylglycerol kinase accessory domain-containing protein similar to diacylglycerol kinase [Lycopersicon esculentum] GI:10798892; contains Pfam profile PF00609: Diacylglycerol kinase accessory domain (presumed) 12 4 19 4 At4g28170 hypothetical protein 12 4 19 5 At4g28330 expressed protein 12 4 19 6 At4g28380 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979" 12 4 19 7 At4g30993 expressed protein 12 4 19 8 At4g31020 expressed protein 12 4 19 9 At4g31150 endonuclease V family protein contains Pfam PF04493: Endonuclease V 12 4 19 10 At4g31210 DNA topoisomerase family protein similar to DNA Topoisomerase I (SP:Q9X3X7) {Zymomonas mobilis} 12 4 19 11 At4g31400 expressed protein 12 4 19 12 At4g31440 hypothetical protein 12 4 19 13 At4g31590 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 12 4 19 14 At4g31640 transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 [Brassica oleracea var. botrytis] GI:3170424; contains Pfam profile PF02362: B3 DNA binding domain 12 4 19 15 At4g34140 D111/G-patch domain-containing protein contains Pfam PF01585: G-patch domain 12 4 19 16 At4g34200 "D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative similar to phosphoglycerate dehydrogenase, Arabidopsis thaliana, SP:O04130" 12 4 19 17 At4g34310 expressed protein 12 4 19 18 At4g34370 IBR domain-containing protein similar to SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila melanogaster}; contains Pfam profile PF01485: IBR domain 12 4 19 19 At4g34530 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 12 4 19 20 At4g34580 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein III (GI:14486705) [Lotus japonicus]; similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus]; similar SEC14 protein, Saccharomyces cerevisiae, PIR2:A30106; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 12 4 19 21 At4g34760 "auxin-responsive family protein auxin-induced protein X15, Glycine max, PIR2:JQ1097" 12 4 19 22 At4g34820 expressed protein 12 4 19 23 AT5G57480 PC-1 D01 12 4 19 24 3XSSC PC-1 D13 12 4 19 25 AT1G29930 PC-1 H01 12 4 20 1 3XSSC PC-1 H13 12 4 20 2 AT3G44150 PC-1 L01 12 4 20 3 3XSSC PC-1 L13 12 4 20 4 AT4G00810 PC-1 P01 12 4 20 5 3XSSC PC-1 P13 12 4 20 6 At4g37445 expressed protein 12 4 20 7 At4g37500 "xanthine dehydrogenase family protein similar to xanthine dehydrogenase from Bos taurus, GI:1620375" 12 4 20 8 At4g37670 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 from Escherichia coli ; contains Pfam profile PF00696: Amino acid kinase family 12 4 20 9 At4g37720 phytosulfokines-related contains similarities to phytosulfokines from [Arabidopsis thaliana] 12 4 20 10 At4g37900 glycine-rich protein 12 4 20 11 At4g37970 "mannitol dehydrogenase, putative similar to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase (Populus tremuloides) (gi:14279694); contains Pfam zinc-binding dehydrogenase domain PF00107" 12 4 20 12 At4g38110 expressed protein 12 4 20 13 At4g38160 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 12 4 20 14 At5g01570 "hypothetical protein hypothetical protein T16O11.19 - Arabidopsis thaliana, EMBL:AC010871" 12 4 20 15 At5g01620 expressed protein several hypothetical proteins - Arabidopsis thaliana 12 4 20 16 At5g01760 "VHS domain-containing protein / GAT domain-containing protein weak similarity to Hrs [Rattus norvegicus] GI:8547026; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 12 4 20 17 At5g01820 CBL-interacting protein kinase 14 (CIPK14) identical to CBL-interacting protein kinase 14 [Arabidopsis thaliana] gi|13249127|gb|AAK16689; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 14 (CIPK14) GI:13249126 12 4 20 18 At5g02000 hypothetical protein 12 4 20 19 At5g02040 prenylated rab acceptor (PRA1) family protein contains Pfam PF03208: PRA1 family protein 12 4 20 20 At5g02200 phytochrome A specific signal transduction component-related contains weak similarity to phytochrome A specific signal transduction component PAT3 [Arabidopsis thaliana] gi|19421998|gb|AAL87850 and far-red elongated hypocotyl protein 1 [Arabidopsis thaliana] gi|17148773|gb|AAL35819 12 4 20 21 At5g02250 ribonuclease II family protein contains Pfam profile PF00773: RNB-like protein 12 4 20 22 At5g05000 "translocate of chloroplast 34 (TOC34) / GTP-binding protein (OEP34) contains Pfam PF04548: AIG1 family;contains TIGRFAM TIGR00991: GTP-binding protein and TIGR00231: small GTP-binding protein domain; 99.7% identical to atToc34 protein (GI:11557975) [Arabidopsis thaliana]; similar to Chain A, Pea Toc34 - A Novel Gtpase Of The Chloroplast Protein Translocon (GI:1865556) [Pisum sativum]; almost identical to SP:Q38906 Translocase of chloroplast 34; identical to cDNA GTP-binding protein (OEP34) GI:1151243" 12 4 20 23 At5g05030 expressed protein contains similarity to carboxyl-terminal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function 12 4 20 24 At5g05210 "nucleolar matrix protein-related contains Pfam domain, PF04935: Surfeit locus protein 6" 12 4 20 25 At5g05270 "chalcone-flavanone isomerase family protein contains very low similarity to chalcone-flavonone isomerase (chalcone isomerase), GI:1705761 from Vitis vinifera; contains Pfam profile PF02431: Chalcone-flavanone isomerase" 12 4 21 1 At5g05400 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 12 4 21 2 At5g05460 glycosyl hydrolase family 85 protein contains similarity to endo-b-N-acetylglucosaminidase GI:13774138 from [Mucor hiemalis] 12 4 21 3 At5g05590 phosphoribosylanthranilate isomerase 2 (PAI2) identical to gi:619747 12 4 21 4 At5g05650 hypothetical protein 12 4 21 5 At5g08310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 21 6 At5g08340 riboflavin biosynthesis protein-related contains weak similarity to Riboflavin biosynthesis protein ribF. (Swiss-Prot:P08391) [Escherichia coli O157:H7] 12 4 21 7 At5g08490 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 21 8 At5g08535 "D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain; contains a 2nt micro-exon, as identified using GeneSeqer." 12 4 21 9 At5g08690 "ATP synthase beta chain 2, mitochondrial identical to SP|P83484 ATP synthase beta chain 2, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}; strong similarity to SP|P17614 ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana plumbaginifolia}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain; supporting cDNA gi|26452187|dbj|AK118582.1|" 12 4 21 10 At5g08770 expressed protein 12 4 21 11 At5g09290 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 12 4 21 12 At5g09340 "ubiquitin, putative similar to ubiquitin SP:P42740 from [Aglaothamnion neglectum]" 12 4 21 13 At5g12090 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 21 14 At5g12150 "pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein weak similarity to glucocorticoid receptor DNA binding factor 1 [Canis familiaris] GI:23266717; contains Pfam profiles PF00169: PH domain, PF00620: RhoGAP domain" 12 4 21 15 At5g12320 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 12 4 21 16 At5g12350 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 12 4 21 17 At5g12870 myb family transcription factor (MYB46) contains PFAM profile: myb DNA binding domain PF00249 12 4 21 18 At5g12930 expressed protein 12 4 21 19 At5g13120 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 12 4 21 20 At5g13180 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; hypothetical protein SENU5, senescence up-regulated - Lycopersicon esculentum, EMBL:Z75524" 12 4 21 21 At5g15900 expressed protein several hypothetical proteins - Arabidopsis thaliana 12 4 21 22 At5g15960 stress-responsive protein (KIN1) / stress-induced protein (KIN1) identical to SP|P18612 Stress-induced KIN1 protein {Arabidopsis thaliana} 12 4 21 23 At5g16140 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 12 4 21 24 At5g16200 50S ribosomal protein-related contains weak similarity to Cyanelle 50S ribosomal protein L35. (Swiss-Prot:P14810) [Cyanophora paradoxa] 12 4 21 25 At5g16340 "AMP-binding protein, putative similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to adenosine monophosphate binding protein 6 AMPBP6 (AMPBP6) GI:20799720" 12 4 22 1 At5g16390 biotin carboxyl carrier protein 1 (BCCP1) identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor [Arabidopsis thaliana] gi|9759121|dbj|BAB09606 12 4 22 2 At5g16550 expressed protein 12 4 22 3 At5g16610 expressed protein 12 4 22 4 At5g19180 "ubiquitin activating enzyme, putative (ECR1) identical to putative ubiquitin activating enzyme E1 [Arabidopsis thaliana] GI:2952433; similar to NEDD8 activating enzyme [Mus musculus] GI:17061821" 12 4 22 5 At5g19220 glucose-1-phosphate adenylyltransferase large subunit 1 (APL1) / ADP-glucose pyrophosphorylase (ADG2) identical to SP|P55229 12 4 22 6 At5g19380 expressed protein 12 4 22 7 At5g19430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 12 4 22 8 At5g19600 "sulfate transporter, putative similar to sulfate transporter [Arabidopsis thaliana] GI:2285885; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain; supporting cDNA gi|14141683|dbj|AB061739.1|" 12 4 22 9 At5g19660 subtilase family protein contains Pfam profile: PF00082 subtilase family 12 4 22 10 At5g19840 transcription factor jumonji (jmjC) domain-containing protein low similarity to PASS1 [Homo sapiens] GI:21591407; contains Pfam profile PF02373: jmjC domain 12 4 22 11 At5g19880 "peroxidase, putative similar to peroxidase [Lycopersicon esculentum] gi|296910|emb|CAA50597" 12 4 22 12 At5g23210 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 12 4 22 13 At5g23260 "MADS-box protein, putative " 12 4 22 14 At5g23405 high mobility group (HMG1/2) family protein contains Pfam profile PF00505: HMG (high mobility group) box 12 4 22 15 At5g23430 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] 12 4 22 16 At5g23600 "tRNA 2'phosphotransferase, putative contains similarity to Swiss-Prot:Q12272 tRNA 2'phosphotransferase [Saccharomyces cerevisiae]; contains Pfam domain PF01885: RNA 2'-phosphotransferase, Tpt1 / KptA family" 12 4 22 17 At5g23670 "serine C-palmitoyltransferase (LCB2) identical to serine palmitoyltransferase [Arabidopsis thaliana] GI:9309380; similar to serine palmitoyltransferase from Solanum tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus musculus [SP|P97363]; contains Pfam profile PF00155: aminotransferase, classes I and II" 12 4 22 18 At5g23830 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 12 4 22 19 At5g23870 pectinacetylesterase family protein contains Pfam profile: PF03283 pectinacetylesterase 12 4 22 20 At5g26617 hypothetical protein 12 4 22 21 At5g26600 expressed protein weak similarity to SP|P18549 Isopenicillin N epimerase (EC 5.-.- ) {Streptomyces clavuligerus} 12 4 22 22 At5g26870 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 12 4 22 23 At5g26930 "zinc finger (GATA type) family protein various predicted proteins, Arabidopsis thaliana" 12 4 22 24 At5g27120 "SAR DNA-binding protein, putative strong similarity to SAR DNA-binding protein-1 [Pisum sativum] GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain" 12 4 22 25 At5g27180 "hypothetical protein predicted proteins, Arabidopsis thaliana" 12 4 23 1 At5g27380 "glutathione synthetase (GSH2) non-consensus AT donor splice site at exon 6, AC acceptor splice site at exon 7; identical to Swiss-Prot:P46416 glutathione synthetase, chloroplast precursor (Glutathione synthase) (GSH synthetase) (GSH-S) [Arabidopsis thaliana]" 12 4 23 2 At5g27440 expressed protein 12 4 23 3 At5g35490 "expressed protein (MRU1) contains Pfam domain, PF04827: Protein of unknown function (DUF635)" 12 4 23 4 At5g35550 myb family transcription factor (MYB123) contains PFAM profile: myb DNA-binding domain PF00249 12 4 23 5 At5g35680 "eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative strong similarity to translation initiation factor (eIF-1A) [Beta vulgaris] GI:17977975; contains Pfam profile PF01176: Eukaryotic initiation factor 1A" 12 4 23 6 At5g35730 EXS family protein / ERD1/XPR1/SYG1 family protein low similarity to xenotropic and polytropic murine leukemia virus receptor [Mus spretus] GI:6093318; contains Pfam profile PF03124: EXS family 12 4 23 7 At5g35880 hypothetical protein 12 4 23 8 At5g35930 AMP-dependent synthetase and ligase family protein similar to iturin A synthetase C [Bacillus subtilis] GI:16040972; contains Pfam profile PF00501: AMP-binding enzyme 12 4 23 9 At5g36090 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 12 4 23 10 At5g36150 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase [gi:6650208] [PMID:11247608]; oxidosqualene cyclase; also highly similar to beta-amyrin synthase, lupeol synthase, cycloartenol synthase" 12 4 23 11 At5g39360 circadian clock coupling factor-related similar to circadian clock coupling factor ZGT [Nicotiana tabacum] GI:14210079 12 4 23 12 At5g39420 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 12 4 23 13 At5g39600 expressed protein 12 4 23 14 At5g39660 Dof-type zinc finger domain-containing protein similar to H-protein promoter binding factor-2a GI:3386546 from [Arabidopsis thaliana] 12 4 23 15 At5g39830 "DegP protease, putative contains similarity to DegP protease precursor GI:2565436 from [Arabidopsis thaliana]" 12 4 23 16 At5g39880 expressed protein 12 4 23 17 At5g40060 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. False intron created at intron 2 to escape a frameshift in the BAC sequence." 12 4 23 18 At5g40120 MADS-box family protein identical to cDNA GI:32402407 MADS-box protein AGL76 12 4 23 19 At5g42860 expressed protein 12 4 23 20 At5g42900 expressed protein similar to unknown protein (pir||T05226) 12 4 23 21 At5g43030 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 12 4 23 22 At5g43090 pumilio/Puf RNA-binding domain-containing protein contains similarity to RNA-binding protein 12 4 23 23 At5g43250 "transcription factor, putative similar to heme activated protein GI:6289057 from (Arabidopsis thaliana) GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina} similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 12 4 23 24 At5g43310 COP1-interacting protein-related contains similarity to COP1-Interacting Protein 7 (CIP7) [Arabidopsis thaliana] GI:3327868 12 4 23 25 At5g43470 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to RPP8" 12 4 24 1 At5g43500 expressed protein 12 4 24 2 At5g46110 "phosphate/triose-phosphate translocator, putative identical to phosphate/triose-phosphate translocator precursor [Arabidopsis thaliana] gi|3983125|gb|AAC83815; similar to triose phosphate/phosphate translocator, chloroplast precursor (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177" 12 4 24 3 At5g46140 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 12 4 24 4 At5g46260 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 12 4 24 5 At5g46310 WRKY family transcription factor identical to WRKY transcription factor 8 GI:15384212 from [Arabidopsis thaliana] 12 4 24 6 At5g46460 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 12 4 24 7 At5g46520 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 12 4 24 8 At5g46680 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 12 4 24 9 At5g46740 ubiquitin-specific protease 21 (UBP21) identical to ubiquitin-specific protease 21 GI:11993482 [Arabidopsis thaliana] 12 4 24 10 At5g49370 hypothetical protein 12 4 24 11 At5g49430 "transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 9 (SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (4 copies)" 12 4 24 12 At5g49570 transglutaminase-like family protein low similarity to peptide:N-glycanase PNGase [Mus musculus] GI:8347622; contains Pfam profile PF01841: Transglutaminase-like superfamily 12 4 24 13 At5g49630 amino acid permease 6 (AAP6) identical to amino acid permease 6 (AAP6) [Arabidopsis thaliana] GI:1769887 12 4 24 14 At5g49760 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 12 4 24 15 At5g49820 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 12 4 24 16 At5g49980 "transport inhibitor response protein, putative E3 ubiquitin ligase SCF complex F-box subunit; similar to F-box containing protein TIR1 GI:13249030 from [Populus tremula x Populus tremuloides]" 12 4 24 17 At5g50040 invertase/pectin methylesterase inhibitor family protein contains similarity to pollen-specific protein Bnm1 [Brassica napus] GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 12 4 24 18 At5g52790 "CBS domain-containing protein-related contains Pfam profile PF01595: Domain of unknown function, weak hit to PF00571: CBS domain" 12 4 24 19 At5g52850 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 12 4 24 20 At5g53010 "calcium-transporting ATPase, putative " 12 4 24 21 At5g53050 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 12 4 24 22 At5g53210 basic helix-loop-helix (bHLH) family protein contains similarity to helix-loop-helix DNA-binding protein 12 4 24 23 At5g53270 seed maturation family protein similar to SP|P09444 Late embryogenesis abundant protein D-34 (LEA D-34) {Gossypium hirsutum}; contains Pfam profile PF04927: Seed maturation protein 12 4 24 24 At5g53450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 24 25 At5g53490 "thylakoid lumenal 17.4 kDa protein, chloroplast identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}" 12 4 25 1 At5g56170 expressed protein contains similarity to GPI-anchored protein 12 4 25 2 At5g56210 expressed protein ; expression supported by MPSS 12 4 25 3 At5g56370 F-box family protein contains F-box domain Pfam:PF00646 12 4 25 4 At5g56430 F-box family protein contains F-box domain Pfam:PF00646 12 4 25 5 At5g56610 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 12 4 25 6 At5g56670 40S ribosomal protein S30 (RPS30C) 12 4 25 7 At5g56850 expressed protein 12 4 25 8 At5g56900 "CwfJ-like family protein / zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF04677: Protein similar to CwfJ C-terminus 1, PF04676: Protein similar to CwfJ C-terminus 2" 12 4 25 9 At5g59420 oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profile PF01237: Oxysterol-binding protein 12 4 25 10 At5g59470 PQ-loop repeat family protein / transmembrane family protein similar to SP|Q60441 Mannose-P-dolichol utilization defect 1 protein (Suppressor of Lec15 and Lec35 glycosylation mutation) (SL15) {Cricetulus griseus}; contains Pfam profile PF04193: PQ loop repeat 12 4 25 11 At5g59616 protein kinase-related contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 12 4 25 12 At5g59700 "protein kinase, putative similar to receptor-like protein kinase [Catharanthus roseus] gi|1644291|emb|CAA97692" 12 4 25 13 At5g59850 "40S ribosomal protein S15A (RPS15aF) cytoplasmic ribosomal protein S15a, Arabidopsis thaliana, EMBL:ATAF1412" 12 4 25 14 At5g59890 actin-depolymerizing factor 4 (ADF4) identical to SP|Q9ZSK3 Actin-depolymerizing factor 4 (ADF-4) (AtADF4) {Arabidopsis thaliana} 12 4 25 15 At5g60030 expressed protein 12 4 25 16 At5g60090 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 12 4 25 17 At5g62760 "nuclear protein ZAP-related similar to nuclear protein ZAP, Mus musculus, EMBL:AB033168 this cDNA provides a truncated ORF likely due to a skipped exon. An alternative ORF is provided." 12 4 25 18 At5g62810 peroxisomal protein (PEX14) identical to PEX14 [Arabidopsis thaliana] GI:11094252; contains Pfam profile PF04695: Peroxisomal membrane anchor protein (Pex14p) conserved region; supporting cDNA gi|11094253|dbj|AB037539.1| 12 4 25 19 At5g62980 "dihydroneopterin aldolase, putative similar to SP|O33725 Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) {Streptococcus pyogenes}; contains Pfam profile PF02152: dihydroneopterin aldolase" 12 4 25 20 At5g63040 expressed protein similar to unknown protein (emb|CAB81845.1) 12 4 25 21 At5g63150 expressed protein 12 4 25 22 At5g63220 expressed protein contains Pfam PF04190: Protein of unknown function (DUF410) 12 4 25 23 At5g63410 "leucine-rich repeat transmembrane protein kinase, putative contains similarity to receptor-like protein kinase" 12 4 25 24 At5g63460 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 12 4 25 25 At5g66005 Expressed protein 12 4 26 1 At5g66030 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| 12 4 26 2 At5g66120 "3-dehydroquinate synthase, putative similar to aroB [Neisseria gonorrhoeae][GI:2661441]; contains 3-dehydroquinate synthase domain PF01761" 12 4 26 3 At5g66160 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical to cDNA ReMembR-H2 protein JR700 mRNA, complete cds GI:6942146" 12 4 26 4 At5g66290 expressed protein 12 4 26 5 At5g66330 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5B [Lycopersicon esculentum] gi|3894391|gb|AAC78595" 12 4 26 6 At5g66490 expressed protein 12 4 26 7 At5g66550 Maf family protein contains Pfam domain PF02545: Maf-like protein 12 4 26 8 3xSSC 3xSSC 12 4 26 9 3xSSC 3xSSC 12 4 26 10 3xSSC 3xSSC 12 4 26 11 3xSSC 3xSSC 12 4 26 12 3xSSC 3xSSC 12 4 26 13 3xSSC 3xSSC 12 4 26 14 3xSSC 3xSSC 12 4 26 15 3xSSC 3xSSC 12 4 26 16 At3g45680 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 12 4 26 17 At3g45740 "hydrolase family protein / HAD-superfamily protein contains TIGRfam domians TIGR01460: HAD-superfamily hydrolase, subfamily IIA and TIGR01456: HAD-superfamily subfamily IIA hydrolase, TIGR01456, CECR5" 12 4 26 18 At3g45900 expressed protein 12 4 26 19 At3g45960 "expansin family protein (EXPL3) contains Pfam profile: PF01357 pollen allergen; expansin-like gene, PMID:11641069, www.bio.psu.edu/expansins" 12 4 26 20 At3g46140 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 12 4 26 21 At3g46200 MutT/nudix family protein similar to head organizer protein P17F11 GI:17976973 from [Xenopus laevis]; contains a NUDIX hydrolase domain IPR000086 12 4 26 22 At3g46390 hypothetical protein 12 4 26 23 At3g46450 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to polyphosphoinositide binding protein Ssh1p (GI:|2739044) {Glycine max} 12 4 26 24 Blank Blank 12 4 26 25 Blank Blank