Soderlund C, Johnson E, Bomhoff M, Descour A. Aug 2009. PAVE: program for assembling and viewing ESTs. BMC Genomics, 10:400
Nelson W, Soderlund C. Apr 2009. Integrating sequence with FPC fingerprint maps. Nucleic Acids Res, 37:e36
Nelson W, Luo M, Ma J, Estep M, Estill J, He R, Talag J, Sisneros N, Kudrna D, Kim H, Ammiraju JS, Collura K, Bharti AK, Messing J, Wing RA, SanMiguel P, Bennetzen JL, Soderlund C. Dec 2008. Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains. BMC Genomics, 9:621
Kim H, Hurwitz B, Yu Y, Collura K, Gill N, SanMiguel P, Mullikin JC, Maher C, Nelson W, Wissotski M, Braidotti M, Kudrna D, Goicoechea JL, Stein L, Ware D, Jackson SA, Soderlund C, Wing RA. Jan 2008. Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza. Genome Biol, 9:R45
Wei F, Coe E, Nelson W, Bharti AK, Engler F, Butler E, Kim H, Goicoechea JL, Chen M, Lee S, Fuks G, Sanchez-Villeda H, Schroeder S, Fang Z, McMullen M, Davis G, Bowers JE, Paterson AH, Schaeffer M, Ga. Jul 2007. Physical and genetic structure of the maize genome reflects its complex evolutionary history. PLoS Genet, 3:e123
Gowda M, Venu RC, Li H, Jantasuriyarat C, Chen S, Bellizzi M, Pampanwar V, Kim H, Dean RA, Stahlberg E, Wing R, Soderlund C, Wang GL. May 2007. Magnaporthe grisea infection triggers RNA variation and antisense transcript expression in rice. Plant Physiol, 144:524-33
Kim H, San Miguel P, Nelson W, Collura K, Wissotski M, Walling JG, Kim JP, Jackson SA, Soderlund C, Wing RA. May 2007. Comparative physical mapping between Oryza sativa (AA genome type) and O. punctata (BB genome type). Genetics, 176:379-90
Gowda M, Venu RC, Jia Y, Stahlberg E, Pampanwar V, Soderlund C, Wang GL. Jan 2007. Use of robust-long serial analysis of gene expression to identify novel fungal and plant genes involved in host-pathogen interactions. Methods Mol Biol, 354:131-44
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