"GeneMachines DeconvoluteFile v4.1.12" "2/16/2006 11:30:47 AM" "RunName= Arabi_v.3_81 Plate" "User= ADMINISTRATOR" "Subarray1,1= 500 500 25 170 26 165" "Subarray1,2= 5000 500 25 170 26 165" "Subarray1,3= 9500 500 25 170 26 165" "Subarray1,4= 14000 500 25 170 26 165" "Subarray2,1= 500 5000 25 170 26 165" "Subarray2,2= 5000 5000 25 170 26 165" "Subarray2,3= 9500 5000 25 170 26 165" "Subarray2,4= 14000 5000 25 170 26 165" "Subarray3,1= 500 9500 25 170 26 165" "Subarray3,2= 5000 9500 25 170 26 165" "Subarray3,3= 9500 9500 25 170 26 165" "Subarray3,4= 14000 9500 25 170 26 165" "Subarray4,1= 500 14000 25 170 26 165" "Subarray4,2= 5000 14000 25 170 26 165" "Subarray4,3= 9500 14000 25 170 26 165" "Subarray4,4= 14000 14000 25 170 26 165" "Subarray5,1= 500 18500 25 170 26 165" "Subarray5,2= 5000 18500 25 170 26 165" "Subarray5,3= 9500 18500 25 170 26 165" "Subarray5,4= 14000 18500 25 170 26 165" "Subarray6,1= 500 23000 25 170 26 165" "Subarray6,2= 5000 23000 25 170 26 165" "Subarray6,3= 9500 23000 25 170 26 165" "Subarray6,4= 14000 23000 25 170 26 165" "Subarray7,1= 500 27500 25 170 26 165" "Subarray7,2= 5000 27500 25 170 26 165" "Subarray7,3= 9500 27500 25 170 26 165" "Subarray7,4= 14000 27500 25 170 26 165" "Subarray8,1= 500 32000 25 170 26 165" "Subarray8,2= 5000 32000 25 170 26 165" "Subarray8,3= 9500 32000 25 170 26 165" "Subarray8,4= 14000 32000 25 170 26 165" "Subarray9,1= 500 36500 25 170 26 165" "Subarray9,2= 5000 36500 25 170 26 165" "Subarray9,3= 9500 36500 25 170 26 165" "Subarray9,4= 14000 36500 25 170 26 165" "Subarray10,1= 500 41000 25 170 26 165" "Subarray10,2= 5000 41000 25 170 26 165" "Subarray10,3= 9500 41000 25 170 26 165" "Subarray10,4= 14000 41000 25 170 26 165" "Subarray11,1= 500 45500 25 170 26 165" "Subarray11,2= 5000 45500 25 170 26 165" "Subarray11,3= 9500 45500 25 170 26 165" "Subarray11,4= 14000 45500 25 170 26 165" "Subarray12,1= 500 50000 25 170 26 165" "Subarray12,2= 5000 50000 25 170 26 165" "Subarray12,3= 9500 50000 25 170 26 165" "Subarray12,4= 14000 50000 25 170 26 165" "SubarrRow" "SubarrCol" "Row" "Column" "ID" "Name" "opt1" "opt2 1 1 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 1 1 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 1 1 5 atc07 Randomly generated negative control 1 1 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 1 1 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 1 8 atc03 Randomly generated negative control 1 1 1 9 At1g01950 "armadillo/beta-catenin repeat family protein / kinesin motor family protein similar to kinesin-like protein GB:CAB41097 GI:5541717 from [Arabidopsis thaliana]; contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat" 1 1 1 10 At1g02010 "cytokinesis-related Sec1 protein, putative similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family; non-consensus GC donor splice site at exon boundary 46833" 1 1 1 11 At1g02100 leucine carboxyl methyltransferase family protein contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} 1 1 1 12 At1g02150 pentatricopeptide (PPR) repeat-containing protein low similiarity to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat 1 1 1 13 At1g02305 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase [Nicotiana rustica] GI:609175; contains Pfam profile PF00112: Papain family cysteine protease" 1 1 1 14 At1g02360 "chitinase, putative similar to chitinase precursor GI:5880845 from [Petroselinum crispum]" 1 1 1 15 At1g02530 "multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]" 1 1 1 16 At1g02590 "aldehyde oxidase, putative similar to aldehyde oxidase GB:BAA28630 GI:3172044 from [Arabidopsis thaliana]" 1 1 1 17 At1g05200 "glutamate receptor family protein (GLR3.4) plant glutamate receptor family, PMID:11379626" 1 1 1 18 At1g05250 "peroxidase, putative similar to peroxidase; peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334" 1 1 1 19 At1g05420 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 1 1 1 20 At1g05460 RNA helicase SDE3 (SDE3) identical to RNA helicase SDE3 [Arabidopsis thaliana] GI:13811296 1 1 1 21 At1g05615 hypothetical protein 1 1 1 22 At1g05670 "UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] GI:7385017; contains Pfam profiles PF00201: UDP-glucoronosyl and UDP-glucosyl transferase, PF01535: PPR repeat" 1 1 1 23 At1g05800 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 1 1 1 24 At1g05850 chitinase-like protein 1 (CTL1) similar to class I chitinase GI:7798656 from [Halimolobos perplexa var. perplexa]; contains Pfam profile PF00182: Chitinase class I; identical to cDNA chitinase-like protein 1 (CTL1) CTL1-ELP1 allele GI:17226328 1 1 1 25 At1g08340 "rac GTPase activating protein, putative similar to rac GTPase activating protein 1 GI:3695059 from [Lotus japonicus]; contains Pfam profile PF00620: RhoGAP domain" 1 1 2 1 At1g08400 chromosome structural maintenance protein-related contains weak similarity to RAD50-interacting protein 1 [Homo sapiens] gi|11967435|gb|AAG42101 1 1 2 2 At1g08570 "thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin; similar to ESTs gb|T46281, gb|R83933, gb|N65879, emb|F14466, gb|N96726, gb|AA042340, and emb|Z18150" 1 1 2 3 At1g08630 "L-allo-threonine aldolase-related similar to L-allo-threonine aldolase (EC 4.1.2.-) (L-allo-TA) (L-allo-threonine acetaldehyde-lyase) (SP:O07051) {Aeromonas jandaei}; similar to ESTs gb|R30517, gb|T42772, gb|R90493, and gb|R90493" 1 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 1 1 2 5 At1g08810 myb family transcription factor (MYB60) 1 1 2 6 At1g08970 "CCAAT-box binding transcription factor Hap5a, putative " 1 1 2 7 At1g09020 "protein kinase, putative similar to protein kinase AKINbetagamma-2 [Zea mays] GI:11139548, AKINbetagamma-1 [Zea mays] GI:11139546; contains Pfam profile PF00571: CBS domain" 1 1 2 8 At1g11620 F-box family protein contains F-box domain Pfam:PF00646 1 1 2 9 At1g11660 "heat shock protein, putative strong similarity to gb|Z70314 heat-shock protein from Arabidopsis thaliana and is a member of the PF|00012 Hsp70 protein family" 1 1 2 10 At1g11840 "lactoylglutathione lyase, putative / glyoxalase I, putative highly similar to putative lactoylglutathione lyase SP:Q39366 from [Brassica oleracea]" 1 1 2 11 At1g11870 "seryl-tRNA synthetase, putative / serine--tRNA ligase, putative similar to PIR|T03949 serine--tRNA ligase (EC 6.1.1.11) serS {Zea mays}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF02403: Seryl-tRNA synthetase N-terminal domain" 1 1 2 12 At1g11990 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.; expression supported by MPSS" 1 1 2 13 At1g12050 "fumarylacetoacetase, putative similar to fumarylacetoacetase (Fumarylacetoacetate hydrolase, Beta-diketonase, FAA)[Rattus norvegicus] SWISS-PROT:P25093" 1 1 2 14 At1g12210 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 2 15 At1g12270 "stress-inducible protein, putative similar to sti (stress inducible protein) [Glycine max] GI:872116; contains Pfam profile PF00515 TPR Domain" 1 1 2 16 At1g15020 "thioredoxin family protein low similarity to FAD-dependent sulfhydryl oxidase-2 [Rattus norvegicus] GI:12483919; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 1 1 2 17 At1g15080 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 1 1 2 18 At1g15215 expressed protein 1 1 2 19 At1g15240 "phox (PX) domain-containing protein weak similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain" 1 1 2 20 At1g15400 expressed protein ESTs gb|H37295 and gb|R64895 come from this gene 1 1 2 21 At1g15430 expressed protein 1 1 2 22 At1g15610 hypothetical protein 1 1 2 23 At1g15680 F-box family protein contains Pfam:PF00646 F-box domain 1 1 2 24 At1g18460 "lipase family protein similar to triacylglycerol lipase, gastric precursor (EC 3.1.1.3) {Canis familiaris} [SP|P80035]" 1 1 2 25 At1g18500 "2-isopropylmalate synthase, putative strong similarity to 2-isopropylmalate synthase (IMS1) [Arabidopsis thaliana] GI:12330687; contains Pfam profile PF00682: HMGL-like" 1 1 3 1 At1g18670 "protein kinase family protein contains Protein kinases ATP-binding region signature, PROSITE:PS00107 and Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 1 3 2 At1g18730 expressed protein 1 1 3 3 At1g18920 hypothetical protein contains Pfam profile PF03794: Domain of Unknown function 1 1 3 4 At1g18990 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 1 1 3 5 At1g19120 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116" 1 1 3 6 At1g19160 F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 3 7 At1g22070 bZIP family transcription factor (TGA3) identical to transcription factor GI:304113 from [Arabidopsis thaliana] 1 1 3 8 At1g22130 MADS-box family protein similar to MADS-box protein (ZAP1) GI:939784 from [Zea mays] 1 1 3 9 At1g22280 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GI:4336436 from [Lotus japonicus]" 1 1 3 10 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 1 1 3 11 At1g22460 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 1 1 3 12 At1g22520 expressed protein contains Pfam PF04418: Domain of unknown function (DUF543) 1 1 3 13 At1g22690 "gibberellin-responsive protein, putative similar to SP|P46688 Gibberellin-regulated protein 2 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein" 1 1 3 14 At1g22750 expressed protein 1 1 3 15 At1g26300 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 1 1 3 16 At1g26340 "cytochrome b5, putative similar to cytochrome b5 GB:BAA74839 GI:4240120 from [Arabidopsis thaliana]" 1 1 3 17 At1g26530 "expressed protein contains Pfam profile: PF04900 protein of unknown function, DUF652; expression supported by MPSS" 1 1 3 18 At1g26590 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 1 1 3 19 At1g26740 expressed protein similar to 50S ribosomal protein L32 (SP:P80339) {Thermus thermophilus} 1 1 3 20 At1g26795 self-incompatibility protein-related similar to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 1 1 3 21 At1g26940 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 1 3 22 At1g27020 expressed protein 1 1 3 23 At1g29900 "carbamoyl-phosphate synthase family protein similar to carbamoylphosphate synthetase GI:6552726 from [Medicago sativa]; contains Pfam profiles PF02786: Carbamoyl-phosphate synthase L chain ATP binding domain, PF00289: Carbamoyl-phosphate synthase L chain N-terminal domain, PF02787: Carbamoyl-phosphate synthetase large chain oligomerisation domain" 1 1 3 24 At1g29950 expressed protein 1 1 3 25 At1g30110 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase GI:1888557 from [Lupinus angustifolius], [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 1 1 4 1 At1g30140 hypothetical protein 1 1 4 2 At1g30360 early-responsive to dehydration stress protein (ERD4) nearly identical to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 1 1 4 3 At1g30440 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 4 4 At1g30570 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 4 5 At1g30630 "coatomer protein epsilon subunit family protein / COPE family protein similar to SP|O14579 Coatomer epsilon subunit (Epsilon-coat protein) (Epsilon-COP) from Homo sapiens, SP|Q60445 from Cricetulus griseus; ESTs gb|Z17908, gb|AA728673, gb|N96555, gb|H76335, gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119 and AI100483 come from this gene" 1 1 4 6 At1g33610 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 1 1 4 7 At1g33710 expressed protein ; expression supported by MPSS 1 1 4 8 At1g33890 "avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family" 1 1 4 9 At1g33950 "avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 (Arabidopsis thaliana), NTGP4 GB:AAD09518 (Nicotiana tabacum); contains Pfam profile: PF00735 cell division protein (members of this family bind GTP)" 1 1 4 10 At1g34110 "leucine-rich repeat transmembrane protein kinase, putative contains similarity to receptor protein kinase-like protein GI:10177178 from [Arabidopsis thaliana]" 1 1 4 11 At1g34170 transcriptional factor B3 family protein contains Pfam profile: PF02362 B3 DNA binding domain; contains non-consensus GA donor splice site at intron 12 1 1 4 12 At1g34360 "translation initiation factor 3 (IF-3) family protein low similarity to Translation initiation factor IF-3 from [subsp. Schizaphis graminum] {Buchnera aphidicola} SP|P46243, {Salmonella typhimurium} SP|P33321; contains Pfam profiles PF05198: Translation initiation factor IF-3 N-terminal domain, PF00707: Translation initiation factor IF-3 C-terminal domain" 1 1 4 13 At1g34410 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 1 1 4 14 At1g44542 cyclase family protein contains Pfam profile: PF04199 putative cyclase 1 1 4 15 At1g44740 expressed protein ; expression supported by MPSS 1 1 4 16 At1g44890 expressed protein 1 1 4 17 At1g44970 "peroxidase, putative similar to peroxidase GI:993004 from [Mercurialis annua]" 1 1 4 18 At1g45190 "expressed protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 1 1 4 19 At1g45233 "expressed protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 1 1 4 20 At1g46768 AP2 domain-containing protein RAP2.1 (RAP2.1) identical to AP2 domain containing protein RAP2.1 GI:2281627 from [Arabidopsis thaliana] 1 1 4 21 At1g47200 "MFP1 attachment factor, putative contains similarity to MFP1 attachment factor 1 GI:7546725 from [Lycopersicon esculentum] similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659" 1 1 4 22 At1g50080 hypothetical protein 1 1 4 23 At1g50160 hypothetical protein similar to putative non-LTR retrolelement reverse transcriptase GB:AAD25836 GI:4587608 from [Arabidopsis thaliana] 1 1 4 24 At1g50370 "serine/threonine protein phosphatase, putative nearly identical to serine/threonine protein phosphatase [Arabidopsis thaliana] GI:14582206" 1 1 4 25 At1g50430 7-dehydrocholesterol reductase / 7-DHC reductase / sterol delta-7-reductase (ST7R) / dwarf5 protein (DWF5) identical to SP|Q9LDU6 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC reductase) (Sterol delta-7-reductase) (Dwarf5 protein) {Arabidopsis thaliana} 1 1 5 1 At1g50620 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 1 1 5 2 At1g50680 "AP2 domain-containing transcription factor, putative similar to RAV1 [Arabidopsis thaliana] GI:3868857" 1 1 5 3 At1g50890 expressed protein 1 1 5 4 At1g50950 thioredoxin-related contains weak hit to Pfam PF00085: Thioredoxin; contains 2 predicted transmembrane domains 1 1 5 5 At1g53610 hypothetical protein 1 1 5 6 At1g53660 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275; contains 8 predicted transmembrane domains" 1 1 5 7 At1g53830 "pectinesterase family protein identical to pectinesterase 2 (PME2/ PE 2) SP:Q42534 from [Arabidopsis thaliana];contains Pfam profiles: PF01095 pectinesterase, PF04043 plant invertase/pectin methylesterase inhibitor" 1 1 5 8 At1g53880 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q64270 Translation initiation factor eIF-2B alpha subunit {Rattus norvegicus}; contains Pfam profiles PF04525: Protein of unknown function (DUF567), PF01008: Initiation factor 2 subunit family" 1 1 5 9 At1g54040 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (4 repeats); similar to jsimilar to epithiospecifier (GI:16118838) [Arabidopsis thaliana] isioform contains AT-AG splice sites at intron 1 1 5 10 At1g54080 "oligouridylate-binding protein, putative similar to oligouridylate binding protein GI:6996560 from [Nicotiana plumbaginifolia]" 1 1 5 11 At1g54217 Expressed protein 1 1 5 12 At1g54270 eukaryotic translation initiation factor 4A-2 / eIF-4A-2 similar to eukaryotic translation initiation factor 4A GI:19696 from [Nicotiana plumbaginifolia] 1 1 5 13 At1g57790 F-box family protein contains Pfam PF00646: F-box domain 1 1 5 14 At1g57870 "shaggy-related protein kinase kappa, putative / ASK-kappa, putative similar to shaggy-related protein kinase kappa SP:Q39019 GI:717180 from [Arabidopsis thaliana]" 1 1 5 15 At1g58180 carbonic anhydrase family protein / carbonate dehydratase family protein similar to SP|P46512 Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase 1) {Flaveria linearis}; contains Pfam profile PF00484: Carbonic anhydrase 1 1 5 16 At1g58227 hypothetical protein 1 1 5 17 At1g58360 amino acid permease I (AAP1) identical to amino acid permease I GI:22641 from [Arabidopsis thaliana] 1 1 5 18 At1g58420 expressed protein 1 1 5 19 At1g59171 hypothetical protein contains similarity to merozoite-piroplasm surface antigen Tams1 1 1 5 20 At1g59520 expressed protein (CW7) 1 1 5 21 At1g62400 "protein kinase, putative similar to protein kinase gi|170047|gb|AAA34002; contains protein kinase domain, Pfam:PF00069" 1 1 5 22 At1g62480 vacuolar calcium-binding protein-related contains weak similarity to vacuolar calcium binding protein [Raphanus sativus] gi|9049359|dbj|BAA99394 1 1 5 23 At1g62660 "beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar identical to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis thaliana]; supported by full-length cDNA GI:14517549; identical to cDNA Beta-fructosidase GI:3115854" 1 1 5 24 At1g62720 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR repeats Pfam Profile: PF01535 1 1 5 25 At1g62855 expressed protein 1 1 6 1 At1g62910 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 2 At1g63070 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 3 At1g63110 cell division cycle protein-related contains 9 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 1 1 6 4 At1g65840 "amine oxidase family protein similar to polyamine oxidase SP:O64411 [Zea mays]; contains Pfam profile PF01593 amine oxidase, flavin-containing" 1 1 6 5 At1g65890 "acyl-activating enzyme 12 (AAE12) similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA acyl-activating enzyme 12 (At1g65890) mRNA GI:29893228, acyl-activating enzyme 12 [Arabidopsis thaliana] GI:29893229" 1 1 6 6 At1g66070 translation initiation factor-related similar to Eukaryotic translation initiation factor 3 subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j) (Swiss-Prot:O75822) [Homo sapiens] 1 1 6 7 At1g66130 oxidoreductase N-terminal domain-containing protein similar to AX110P [Daucus carota] GI:285739; contains Pfam profile PF01408: Oxidoreductase family NAD-binding Rossmann fold 1 1 6 8 At1g66260 "RNA and export factor-binding protein, putative similar to GI:7159943 from [Mus musculus] (RNA 6 (4), 638-650 (2000))" 1 1 6 9 At1g66330 senescence-associated family protein similar to senescence-associated protein (GI:12836895) [Ipomoea batatas] 1 1 6 10 At1g66500 "zinc finger (C2H2-type) family protein contains Prosite PS00028: Zinc finger, C2H2 type, domain; similar to S-locus protein 4 (GI:6069478) [Brassica rapa]; similar to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens]" 1 1 6 11 At1g66550 WRKY family transcription factor similar to DNA-binding protein 3 [Nicotiana tabacum] GI:7406995 1 1 6 12 At1g69240 "hydrolase, alpha/beta fold family protein low similarity to SP|Q40708 PIR7A protein {Oryza sativa}, polyneuridine aldehyde esterase GI:6651393 from [Rauvolfia serpentina], ethylene-induced esterase [Citrus sinensis] GI:14279437; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 6 13 At1g69290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 6 14 At1g69420 zinc finger (DHHC type) family protein contains Pfam profile: PF01529: DHHC zinc finger domain 1 1 6 15 At1g69480 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 1 1 6 16 At1g69600 zinc finger homeobox family protein / ZF-HD homeobox family protein 1 1 6 17 At1g69660 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 6 18 At1g69840 band 7 family protein strong similarity to hypersensitive-induced response protein [Zea mays] GI:7716466; contains Pfam profile PF01145: SPFH domain / Band 7 family 1 1 6 19 At1g69900 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 1 1 6 20 At1g72700 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0, SP|O43520]; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 1 1 6 21 At1g72760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 6 22 At1g72930 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 1 6 23 At1g72990 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:2289790 from [Bacillus circulans]; contains Pfam profile PF01301: Glycosyl hydrolases family 35 1 1 6 24 At1g73170 expressed protein 1 1 6 25 At1g73210 expressed protein 1 1 7 1 At1g73370 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative similar to sucrose synthase GI:6682841 from [Citrus unshiu]" 1 1 7 2 At1g73430 sec34-like family protein contains Pfam PF04136: Sec34-like family profile; similar to Conserved oligomeric Golgi complex component 3 (Vesicle docking protein SEC34 homolog) (p94) (Swiss-Prot:Q96JB2) [Homo sapiens] 1 1 7 3 AT5G57480 PC-1 A12 1 1 7 4 3XSSC PC-1 A24 1 1 7 5 AT1G29930 PC-1 E12 1 1 7 6 3XSSC PC-1 E24 1 1 7 7 AT3G44150 PC-1 I12 1 1 7 8 3XSSC PC-1 I24 1 1 7 9 AT4G00810 PC-1 M12 1 1 7 10 3XSSC PC-1 M24 1 1 7 11 At1g76260 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to retinoblastoma A associated protein; RbAp48 (GI:3309245) [Xenopus laevis] 1 1 7 12 At1g76320 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 1 1 7 13 At1g76450 oxygen-evolving complex-related SP:Q9S720; contains a PsbP domain 1 1 7 14 At1g76510 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain 1 1 7 15 At1g76670 "transporter-related low similarity to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] GI:2997593, GDP-Mannose transporter [Arabidopsis thaliana] GI:15487237; contains Pfam profile PF00892: Integral membrane protein" 1 1 7 16 At1g76720 "eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2" 1 1 7 17 At1g76890 "trihelix DNA-binding protein / GT-2 factor (GT2) identical to GT2 factor [Arabidopsis thaliana] GI:416490, GI:2664202 (DNA binding factor GT-2 from Arabidopsis)" 1 1 7 18 At1g76930 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 1 1 7 19 At1g79560 "FtsH protease, putative contains similarity to chloroplast FtsH protease GI:5804782 from [Nicotiana tabacum]" 1 1 7 20 At1g79610 "sodium proton exchanger, putative (NHX6) identical to Na+/H+ exchanger 6 [Arabidopsis thaliana] gi|19919848|gb|AAM08407 (Plant J. (2002) In press); contains similarity to Na+/H+ antiporter GI:1655701 from [Xenopus laevis]; contains non-consensus AT/AC splice sites; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 1 1 7 21 At1g79750 "malate oxidoreductase, putative similar to malate oxidoreductase (NADP-dependent malic enzyme) GB:P34105 (Populus balsamifera subsp. trichocarpa)" 1 1 7 22 At1g79790 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 1 1 7 23 At1g79920 "heat shock protein 70, putative / HSP70, putative contains Pfam profile: PF00012 Heat shock hsp70 proteins; similar to heat-shock proteins GB:CAA94389, GB:AAD55461 [Arabidopsis thaliana]" 1 1 7 24 At1g79970 expressed protein 1 1 7 25 At1g80110 expressed protein contains similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951 1 1 8 1 At1g80170 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase GI:7381227 from [Lycopersicon esculentum]; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 1 8 2 At2g03010 expressed protein 1 1 8 3 At2g03060 MADS-box family protein 1 1 8 4 At2g03260 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 1 1 8 5 At2g03320 hypothetical protein 1 1 8 6 At2g03505 "glycosyl hydrolase family protein 17 similar to Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1-3)-beta- glucan endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3- endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]; similar to beta 1,3-glucanase (GI:924953) [Triticum aestivum]" 1 1 8 7 At2g03560 "F-box family protein (FBX7) identical to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; contains F-box domain PF:00646" 1 1 8 8 At2g03750 "sulfotransferase family protein similar to similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 1 1 8 9 At2g03810 18S pre-ribosomal assembly protein gar2-related contains weak similarity to Swiss-Prot:P41891 protein gar2 [Schizosaccharomyces pombe] 1 1 8 10 At2g07706 expressed protein 1 1 8 11 At2g07718 "cytochrome b, putative similar to Cytochrome b (Swiss-Prot:P42792) [Arabidopsis thaliana]; similar to Cytochrome b (Swiss-Prot:P09843) [Oenothera bertiana]; contains 3 transmembrane domains" 1 1 8 12 At2g07750 "DEAD box RNA helicase, putative similar to RNA helicase RH25 [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 1 8 13 At2g09388 hypothetical protein 1 1 8 14 At2g10350 "Ulp1 protease family protein similar to At5g28170, At1g35110, At1g44880, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010 ; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 1 8 15 At2g10450 "14-3-3 protein, putative / grf15, putative contains similarity to GF14 psi chain GI:166717, SP:P42644 from [Arabidopsis thaliana]" 1 1 8 16 At2g10965 hypothetical protein 1 1 8 17 At2g11010 hypothetical protein 1 1 8 18 At2g16220 F-box family protein 1 1 8 19 At2g16290 F-box family protein contains Pfam PF00646: F-box domain; 1 1 8 20 At2g16470 "zinc finger (CCCH-type) family protein / GYF domain-containing protein contains Pfam domains PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF02213: GYF domain" 1 1 8 21 At2g16520 hypothetical protein 1 1 8 22 At2g16730 glycosyl hydrolase family 35 protein similar to beta-galactosidase BG1 GI:15081596 from [Vitis vinifera] 1 1 8 23 At2g16790 shikimate kinase family protein similar to thermosensitive glucokinase from Escherichia coli [SP|P39208] [SP|P46859]; contains Pfam profile PF01202: shikimate kinase 1 1 8 24 At2g16940 RNA recognition motif (RRM)-containing protein 1 1 8 25 At2g17000 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 1 1 9 1 At2g19800 expressed protein similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 1 1 9 2 At2g19870 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P25270 Ribose methyltransferase PET56 (EC 2.1.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 1 1 9 3 At2g20030 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 9 4 At2g20080 expressed protein 1 1 9 5 At2g20260 "photosystem I reaction center subunit IV, chloroplast, putative / PSI-E, putative (PSAE2) identical to SP|Q9S714; similar to SP|P12354 Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) {Spinacia oleracea}; contains Pfam profile PF02427: Photosystem I reaction centre subunit IV / PsaE" 1 1 9 6 At2g20320 DENN (AEX-3) domain-containing protein contains Pfam domain PF02141: DENN (AEX-3) domain 1 1 9 7 At2g20495 expressed protein 1 1 9 8 At2g20540 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 9 9 At2g23160 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 9 10 At2g23220 "cytochrome P450, putative " 1 1 9 11 At2g23390 expressed protein 1 1 9 12 At2g23450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 9 13 At2g23620 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 9 14 At2g23690 expressed protein 1 1 9 15 At2g23890 5' nucleotidase family protein contains Pfam PF05761: 5' nucleotidase family; similar to Cytosolic purine 5'-nucleotidase (EC 3.1.3.5) (5'-nucleotidase cytosolic II) (Swiss-Prot:P49902) [Homo sapiens] 1 1 9 16 At2g23945 "chloroplast nucleoid DNA-binding protein-related contains weak similarity to GP|2541876|dbj|BAA22813.1||D26015 CND41, chloroplast nucleoid DNA binding protein {Nicotiana tabacum}" 1 1 9 17 At2g26790 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 9 18 At2g26830 "choline/ethanolamine kinase family protein similar to SP|Q9HBU6 Ethanolamine kinase (EC 2.7.1.82) (EKI){Homo sapiens}, GmCK3p [Glycine max] GI:1438883; contains Pfam profile PF01633: Choline/ethanolamine kinase" 1 1 9 19 At2g26980 CBL-interacting protein kinase 3 (CIPK3) identical to CBL-interacting protein kinase 3 [Arabidopsis thaliana] gi|9280638|gb|AAF86507 1 1 9 20 At2g27030 "calmodulin-2/3/5 (CAM5) (TCH1) identical to calmodulin GI:474183 from [Arabidopsis thaliana], SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}" 1 1 9 21 At2g27160 hypothetical protein 1 1 9 22 At2g27220 homeodomain-containing protein 1 1 9 23 At2g27360 "lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 1 1 9 24 At2g27395 cysteine protease-related contains similarity to senescence-specific cysteine protease GI:5823018 from [Brassica napus] 1 1 9 25 At2g30130 LOB domain protein 12 / lateral organ boundaries domain protein 12 (LBD12) identical to SP|Q8LBW3 LOB domain protein 12 {Arabidopsis thaliana} 1 1 10 1 At2g30200 expressed protein 1 1 10 2 At2g30350 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 1 1 10 3 At2g30400 ovate family protein 57% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 1 1 10 4 At2g30560 glycine-rich protein 1 1 10 5 At2g30600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] 1 1 10 6 At2g30740 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 1 10 7 At2g30800 "DEIH-box RNA/DNA helicase, putative similar to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 1 1 10 8 At2g33410 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative " 1 1 10 9 At2g33460 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 1 1 10 10 At2g33600 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 1 1 10 11 At2g33670 "seven transmembrane MLO family protein / MLO-like protein 5 (MLO5) identical to MLO-like protein 5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 1 1 10 12 At2g33780 VQ motif-containing protein contains PF05678: VQ motif 1 1 10 13 At2g33820 mitochondrial substrate carrier family protein (BAC1) contains Pfam profile: PF00153 mitochondrial carrier protein 1 1 10 14 At2g34040 apoptosis inhibitory 5 (API5) family protein contains Pfam domain PF05918 Apoptosis inhibitory protein 5 (API5) 1 1 10 15 At2g34080 "cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]" 1 1 10 16 At2g36680 expressed protein 1 1 10 17 At2g36720 "PHD finger transcription factor, putative " 1 1 10 18 At2g36885 expressed protein 1 1 10 19 At2g36920 expressed protein 1 1 10 20 At2g37060 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 1 1 10 21 At2g37110 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 1 1 10 22 At2g37260 WRKY family transcription factor (TTG2) contains Pfam profile: PF03106 WRKY DNA -binding domain 1 1 10 23 At2g37320 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 10 24 At2g39920 acid phosphatase class B family protein weak similarity to pod storage protein [Phaseolus vulgaris GI:2627233 SP|P10743 STEM 31 kDa glycoprotein precursor (Vegetative storage protein B) {Glycine max}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 1 1 10 25 At2g39975 hypothetical protein 1 1 11 1 At2g40110 "yippee family protein similar to mdgl-1 [Mus musculus] GI:10441648, Yippee protein [Drosophila melanogaster] GI:5713279; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 1 1 11 2 At2g40130 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 1 1 11 3 At2g40280 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 1 1 11 4 At2g40330 Bet v I allergen family protein contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 1 1 11 5 At2g40470 LOB domain protein 15 / lateral organ boundaries domain protein 15 (LBD15) identical to SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana}; similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana] GI:19918971 1 1 11 6 At2g40520 nucleotidyltransferase family protein contains Pfam profile: PF01909 nucleotidyltransferase domain 1 1 11 7 At2g43080 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 1 11 8 At2g43140 basic helix-loop-helix (bHLH) family protein contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain 1 1 11 9 At2g43270 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 1 11 10 At2g43340 expressed protein 1 1 11 11 At2g43520 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 1 1 11 12 At2g43570 "chitinase, putative similar to chitinase class IV GI:722272 from [Brassica napus]" 1 1 11 13 At2g43730 "lectin-related low similarity to lectin 3 [Helianthus tuberosus] GI:4091899, RTM1 [Arabidopsis thaliana] GI:6503088" 1 1 11 14 At2g43780 expressed protein 1 1 11 15 At2g46420 expressed protein 1 1 11 16 At2g46470 "OXA1 protein, putative similar to Oxa1 protein [Arabidopsis thaliana] GI:10176922" 1 1 11 17 At2g46610 "arginine/serine-rich splicing factor, putative similar to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana}" 1 1 11 18 At2g46670 "pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative similar to pseudo-response regulator 9 [Arabidopsis thaliana] GI:10281000, timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022" 1 1 11 19 At2g46820 expressed protein 1 1 11 20 At2g46880 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 1 11 21 At2g47020 "peptide chain release factor, putative similar to peptide chain release factor 1 [Escherichia coli] GI:147567; contains Pfam profiles PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain" 1 1 11 22 At2g47060 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 1 11 23 At3g02390 expressed protein 1 1 11 24 At3g02450 "cell division protein ftsH, putative similar to SWISS-PROT:P46469 cell division protein ftsH homolog [Lactococcus lactis]; contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 1 1 11 25 At3g02570 phosphomannose isomerase type I family protein contains Pfam profile: PF01238 phosphomannose isomerase type I 1 1 12 1 At3g02630 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Sesamum indicum GI:575942, Cucumis sativus SP|P32061, Ricinus communis SP|P22337; contains Pfam profile PF03405 Fatty acid desaturase" 1 1 12 2 At3g02810 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 12 3 At3g02860 expressed protein 1 1 12 4 At3g03020 expressed protein 1 1 12 5 At3g03080 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar to allyl alcohol dehydrogenase [Nicotiana tabacum] GI:6692816" 1 1 12 6 At3g05675 expressed protein 1 1 12 7 At3g05710 "syntaxin, putative similar to syntaxin of plants 42 [Arabidopsis thaliana] GI:5059352" 1 1 12 8 At3g05870 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 1 12 9 At3g05930 germin-like protein (GLP8) identical to germin-like protein subfamily 2 member 3 SP|P93000 [PMID:9869400]; contains Pfam profile: PF01072 germin family 1 1 12 10 At3g06050 "alkyl hydroperoxide reductase/thiol specific antioxidant (AhpC/TSA)/mal allergen family protein identical to SP|Q9M7T0 Putative peroxiredoxin, mitochondrial precursor {Arabidopsis thaliana}; similar to thioredoxin peroxidase [Capsicum annuum] GI:18654477; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 1 1 12 11 At3g06090 hypothetical protein 1 1 12 12 At3g06240 F-box family protein contains F-box domain Pfam:PF00646 1 1 12 13 At3g06300 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 1 12 14 At3g09230 myb family transcription factor identical to transforming protein (myb) homolog GB:S22520 [Arabidopsis thaliana] 1 1 12 15 At3g09290 "zinc finger (C2H2 type) family protein ; contains Pfam profile: PF00096 Zinc finger, C2H2 type" 1 1 12 16 At3g09470 expressed protein 1 1 12 17 At3g09520 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 1 1 12 18 At3g09710 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 1 1 12 19 At3g09760 "zinc finger (C3HC4-type RING finger) family protein ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 12 20 At3g09900 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:871510 from [Pisum sativum]; contains Pfam profile: PF00071 Ras family" 1 1 12 21 At3g09940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase (NADH) GB:JU0182 (Cucumis sativus)" 1 1 12 22 At3g12340 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative contains Pfam profile: PF00254, FKBP-type peptidyl-prolyl cis-trans isomerases" 1 1 12 23 At3g12380 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin 1 1 12 24 At3g12550 "XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain" 1 1 12 25 At3g12610 "DNA-damage-repair/toleration protein, putative (DRT100) similar to DNA-damage-repair/toleration protein DRT100 [Precursor] SWISS-PROT:Q00874, NCBI_gi:5701788; contains multiple LRR repeats Pfam profile: PF00560" 1 1 13 1 At3g12770 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 1 13 2 At3g12830 auxin-responsive family protein similar to auxin-induced protein (SP:P33082) [Glycine max] 1 1 13 3 At3g13000 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547" 1 1 13 4 At3g13050 "transporter-related low similarity to apical organic cation transporter [Sus scrofa] GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2) {Rattus norvegicus}; contains Pfam profile PF00083: major facilitator superfamily protein" 1 1 13 5 At3g15355 ubiquitin-conjugating enzyme-related similar to ubiquitin-conjugating enzyme (GI:3319990) [Mus musculus]; similar to Baculoviral IAP repeat-containing protein 6 (Ubiquitin-conjugating BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo sapiens]; 1 1 13 6 At3g15395 expressed protein 1 1 13 7 At3g15550 expressed protein ; expression supported by MPSS 1 1 13 8 At3g15605 hypothetical protein 1 1 13 9 At3g15760 expressed protein 1 1 13 10 At3g15820 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 1 1 13 11 At3g15980 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]" 1 1 13 12 At3g16020 hypothetical protein 1 1 13 13 At3g18680 aspartate/glutamate/uridylate kinase family protein similar to UMP-kinase GB:CAB38122 gi:4468612 from [Lactococcus lactis] ; contains Pfam profile PF00696: Amino acid kinase family 1 1 13 14 At3g18740 60S ribosomal protein L30 (RPL30C) similar to 60S RIBOSOMAL PROTEIN L30 GB:O49884 from [Lupinus luteus] 1 1 13 15 At3g18870 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 1 13 16 At3g18930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 1 1 13 17 At3g19085 hypothetical protein 1 1 13 18 At3g19150 kip-related protein 6 (KRP6) / cyclin-dependent kinase inhibitor 6 (ICK6) identical to cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis thaliana] GI:14422295 1 1 13 19 At3g19310 expressed protein similar to GB:CAB16796 from [Arabidopsis thaliana] 1 1 13 20 At3g19360 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 1 13 21 At3g22060 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069 1 1 13 22 At3g22110 "20S proteasome alpha subunit C (PAC1) (PRC9) identical to GB:AAC32057 from [Arabidopsis thaliana] (Genetics (1998) 149 (2), 677-692); identical to cDNA proteasome subunit prc9 GI:2511583" 1 1 13 23 At3g22270 expressed protein 1 1 13 24 At3g22350 "F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 1 1 13 25 At3g22460 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative nearly identical over 185 amino acids to SP|P47998 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}" 1 1 14 1 At3g22500 late embryogenesis abundant protein (ECP31) / LEA protein identical to LEA protein in group 5 (AtECP31) [Arabidopsis thaliana] GI:1526422; contains Pfam profile PF04927: Seed maturation protein 1 1 14 2 At3g22690 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 14 3 At3g22750 "protein kinase, putative similar to protein kinase ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 1 1 14 4 At3g25660 "glutamyl-tRNA(Gln) amidotransferase, putative similar to SP|O06491 Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) {Bacillus subtilis}; contains Pfam profile PF01425: Amidase" 1 1 14 5 At3g25717 expressed protein 1 1 14 6 At3g25860 dihydrolipoamide S-acetyltransferase (LTA2) identical to dihydrolipoamide S-acetyltransferase (LTA2) [Arabidopsis thaliana] GI:5881963 1 1 14 7 At3g25900 homocysteine S-methyltransferase 1 (HMT-1) identical to GB:AAF23821 from [Arabidopsis thaliana] 1 1 14 8 At3g26060 "peroxiredoxin Q, putative similar to peroxiredoxin Q [Sedum lineare] GI:6899842; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 1 1 14 9 At3g26110 expressed protein 1 1 14 10 At3g26235 hypothetical protein 1 1 14 11 At3g26290 "cytochrome P450 71B26, putative (CYP71B26) identical to cytochrome P450 71B26 (SP:Q9LTL0) [Arabidopsis thaliana]; contains Pfam profile: PF00067 cytochrome P450" 1 1 14 12 At3g29020 myb family transcription factor (MYB110) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 14 13 At3g29050 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 1 1 14 14 At3g29185 expressed protein 1 1 14 15 At3g29240 "expressed protein similar to At1g33780 [Arabidopsis thaliana]; contains Pfam profile PF02622: Uncharacterized ACR, COG1678" 1 1 14 16 At3g29360 "UDP-glucose 6-dehydrogenase, putative very strong similarity to SP|Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain" 1 1 14 17 At3g29400 exocyst subunit EXO70 family protein similar to EXO70 protein (GI:2352998) [Mus musculus]; contains Pfam domain PF03081: Exo70 exocyst complex subunit 1 1 14 18 At3g29660 hypothetical protein 1 1 14 19 At3g29720 "transferase-related low similarity to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234" 1 1 14 20 At3g43770 hypothetical protein 1 1 14 21 At3g43840 expressed protein 1 1 14 22 At3g44040 expressed protein 1 1 14 23 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 1 1 14 24 At3g44240 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 1 1 14 25 At3g44310 nitrilase 1 (NIT1) identical to SP|P32961 Nitrilase 1 (EC 3.5.5.1) {Arabidopsis thaliana} 1 1 15 1 At3g44520 esterase/lipase/thioesterase family protein similar to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}; contains Interpro entry IPR000379 1 1 15 2 At3g44580 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 1 15 3 At3g47450 expressed protein 1 1 15 4 At3g47490 HNH endonuclease domain-containing protein contains Pfam domain PF01844: HNH endonuclease 1 1 15 5 At3g47630 expressed protein 1 1 15 6 At3g47680 expressed protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 1 1 15 7 At3g47836 expressed protein 1 1 15 8 At3g47900 ubiquitin carboxyl-terminal hydrolase family protein contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 1 1 15 9 At3g48060 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 1 1 15 10 At3g48120 expressed protein 1 1 15 11 At3g51010 expressed protein 1 1 15 12 At3g51060 "zinc finger protein, putative / lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702)" 1 1 15 13 At3g51230 hypothetical protein 1 1 15 14 At3g51290 proline-rich family protein 1 1 15 15 At3g51450 "strictosidine synthase family protein similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]" 1 1 15 16 At3g51510 expressed protein 1 1 15 17 At3g51670 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh2p (GI:2739046) {Glycine max};; contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 1 1 15 18 At3g51730 "saposin B domain-containing protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 1 1 15 19 At3g54200 "expressed protein hin1 protein, Nicotiana tabacum, PIR:T03265" 1 1 15 20 At3g54260 "expressed protein various predicted proteins, Arabidopsis thaliana" 1 1 15 21 At3g54430 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 1 1 15 22 At3g54480 SKP1 interacting partner 5 (SKIP5) identical to GP:14348816 SKP1-interacting partner 5 {Arabidopsis thaliana} 1 1 15 23 At3g54640 "tryptophan synthase, alpha subunit (TSA1) identical to gi:619753" 1 1 15 24 At3g54700 "phosphate transporter, putative strong similarity to phosphate transporter (AtPT2) [Arabidopsis thaliana] GI:1502430" 1 1 15 25 At3g54870 "armadillo/beta-catenin repeat family protein / kinesin motor family protein kinesin, Syncephalastrum racemosum, AJ225894" 1 1 16 1 At3g54900 "CAX-interacting protein 1 (CAXIP1) identical to cDNA CAXIP1 protein (CAXIP1) GI:27752304, CAXIP1 protein [Arabidopsis thaliana] GI:27752305" 1 1 16 2 At3g57700 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 1 16 3 At3g57760 protein kinase family protein contains similarity to protein kinases 1 1 16 4 At3g57910 D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain 1 1 16 5 At3g57970 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 1 1 16 6 At3g58160 "myosin heavy chain, putative similar to myosin heavy chain [Arabidopsis thaliana] gi|602328|emb|CAA84067." 1 1 16 7 At3g58220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 16 8 At3g58400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam PF00917: MATH domain 1 1 16 9 At3g58450 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 1 1 16 10 At3g61180 "zinc finger (C3HC4-type RING finger) family protein low similarity to RNF6 protein [Mus musculus] GI:20530241; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 16 11 At3g61240 "DEAD/DEAH box helicase, putative (RH12) identical to cDNA DEAD box RNA helicase, RH12 GI:3776000" 1 1 16 12 At3g61390 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana 1 1 16 13 At3g61440 "cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative identical to cysteine synthase (EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 1 1 16 14 At3g61600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 1 1 16 15 At3g61660 hypothetical protein 1 1 16 16 At3g61820 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 1 16 17 At3g61870 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803), PIR:S75899" 1 1 16 18 At4g00810 60S acidic ribosomal protein P1 (RPP1B) similar to acidic ribosomal protein p1 1 1 16 19 At4g00860 stress-related ozone-induced protein (OZI1) / stress-related ozone-responsive protein identical to stress-related ozone-induced protein AtOZI1 (mRNA corresponding to this gene accumulates in response to ozone stress and pathogen (bacterial) infection); putative pathogenesis-related protein (GI:790583) [Arabidopsis thaliana] 1 1 16 20 At4g01010 "cyclic nucleotide-regulated ion channel, putative (CNGC13) similar to CaM-regulated potassium ion channel (ACBK1) GI:8515883 from [Arabidopsis thaliana]" 1 1 16 21 At4g01050 hydroxyproline-rich glycoprotein family protein 1 1 16 22 At4g01220 expressed protein 1 1 16 23 At4g01245 hypothetical protein 1 1 16 24 At4g01430 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 1 1 16 25 At4g01460 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 17 1 At4g04260 bromo-adjacent homology (BAH) domain-containing protein similar to ES43 [Hordeum vulgare] GI:1345528; contains Pfam profile PF01426: BAH domain 1 1 17 2 At4g04360 hypothetical protein 1 1 17 3 At4g04530 "Ulp1 protease family protein (snoR29) contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; snoR29 gene for small nucleolar RNA GI:15706258" 1 1 17 4 At4g04620 "autophagy 8b (APG8b) identical to autophagy 8b [Arabidopsis thaliana] GI:19912153; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 1 1 17 5 At4g04770 ATP-binding-cassette transporter (ABC1) Identical to the protein described in PMID:11156608 and note that sequence was not deposited into GenBank by the authors. 1 1 17 6 At4g04830 "methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein low similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 1 1 17 7 At4g04980 "hydroxyproline-rich glycoprotein family protein Common family members: At4g18570, At3g25690, At5g61090 [Arabidopsis thaliana]" 1 1 17 8 At4g05010 F-box family protein contains Pfam PF00646: F-box domain; similar to late embryogenesis abundant protein (GI:1350541) (PIR|T09287) {Picea glauca} 1 1 17 9 At4g09740 "glycosyl hydrolase family 9 protein similar to endo-beta-1,4-glucanase; cellulase GI:1655543 from [Capsicum annuum]" 1 1 17 10 At4g09780 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 1 17 11 At4g09960 MADS-box protein (AGL11) 1 1 17 12 At4g09980 "methyltransferase MT-A70 family protein low similarity to SP|P25583 Karyogamy protein KAR4 {Saccharomyces cerevisiae}, (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase))" 1 1 17 13 At4g10140 expressed protein 1 1 17 14 At4g10180 light-mediated development protein 1 / deetiolated1 (DET1) identical to Light-mediated development protein DET1 (Deetiolated1) (Swiss-Prot:P48732) [Arabidopsis thaliana] 1 1 17 15 At4g10350 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; nap gene, Arabidopsis thaliana, gb:AJ222713" 1 1 17 16 At4g10410 hypothetical protein 1 1 17 17 At4g13220 expressed protein 1 1 17 18 At4g13261 hypothetical protein 1 1 17 19 At4g13380 heavy-metal-associated domain-containing protein low similarity to wound-responsive gene KED [Nicotiana tabacum] GI:8096269; contains Pfam profile PF00403: Heavy-metal-associated domain 1 1 17 20 At4g13440 "calcium-binding EF hand family protein low similarity to Polcalcin (Calcium-binding pollen allergen) from {Phleum pratense} SP|O82040, {Cynodon dactylon} SP|P94092; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 1 1 17 21 At4g13600 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 1 17 22 At4g13650 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 1 17 23 At4g13810 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 1 1 17 24 At4g13850 glycine-rich RNA-binding protein (GRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabidopsis thaliana] GI:2826811 1 1 17 25 At4g16195 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 1 1 18 1 At4g16240 hypothetical protein 1 1 18 2 At4g16410 expressed protein contains Pfam PF05421: Protein of unknown function (DUF751) 1 1 18 3 At4g16447 expressed protein 1 1 18 4 At4g16570 protein arginine N-methyltransferase-related contains weak similarity to protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Swiss-Prot:P55345) [Homo sapiens] 1 1 18 5 At4g16630 "DEAD/DEAH box helicase, putative (RH28) identical to cDNA DEAD box RNA helicase, RH28 GI:3776026" 1 1 18 6 At4g16750 "DRE-binding transcription factor, putative similar to DRE binding factor 2 [Zea mays] GI:21908034; contains Pfam profile PF00847: AP2 domain" 1 1 18 7 At4g16780 homeobox-leucine zipper protein 4 (HAT4) / HD-ZIP protein 4 SP|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4) (SP:Q05466) [Arabidopsis thaliana] (HD-ZIP homeotic protein Athb-2 1 1 18 8 At4g19330 "kelch repeat-containing F-box family protein very low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 1 18 9 At4g19390 expressed protein 1 1 18 10 At4g19550 expressed protein 1 1 18 11 At4g19610 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 1 18 12 At4g19750 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 1 1 18 13 At4g19830 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to 70 kDa peptidylprolyl isomerase (Peptidylprolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum aestivum]; FKBP-type peptidyl-prolyl cis-trans isomerase,Synechocystis sp., PIR2:S75144; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 1 1 18 14 At4g19985 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 1 1 18 15 At4g20020 expressed protein 1 1 18 16 At4g22830 expressed protein 1 1 18 17 At4g22890 expressed protein 1 1 18 18 At4g23040 UBX domain-containing protein similar to Ara4-interacting protein [Arabidopsis thaliana] GI:13160609; contains Pfam profile PF00789: UBX domain 1 1 18 19 At4g23100 glutamate-cysteine ligase / gamma-glutamylcysteine synthetase (GSH1) identical to glutamate-cysteine ligase SP:P46309 from [Arabidopsis thaliana]; contains Pfam profile: PF04107 glutamate-cysteine ligase family 2(GCS2) 1 1 18 20 At4g23250 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 1 1 18 21 At4g23300 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 1 18 22 At4g23470 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 1 18 23 At4g23500 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 1 1 18 24 At4g26080 protein phosphatase 2C ABI1 / PP2C ABI1 / abscisic acid-insensitive 1 (ABI1) nearly identical to SP|P49597 Protein phosphatase 2C ABI1 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 1) {Arabidopsis thaliana} 1 1 18 25 At4g26120 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 1 1 19 1 At4g26270 phosphofructokinase family protein similar to phosphofructokinase [Amycolatopsis methanolica] GI:17432243; contains Pfam profile PF00365: Phosphofructokinase 1 1 19 2 At4g26330 "subtilase family protein contains similarity to SBT1, a subtilase from tomato plants GI:1771160 from [Lycopersicon esculentum]" 1 1 19 3 At4g26480 "KH domain-containing protein qkI-7, Mus musculus" 1 1 19 4 At4g26520 "fructose-bisphosphate aldolase, cytoplasmic identical to SP|P22197 Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis thaliana}" 1 1 19 5 At4g26660 expressed protein weak similarity to phragmoplast-associated kinesin-related protein 1 [Arabidopsis thaliana] GI:8745333 1 1 19 6 At4g26710 ATP synthase subunit H family protein contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) [Homo sapiens] 1 1 19 7 At4g29290 hypothetical protein 1 1 19 8 At4g29360 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 1 19 9 At4g29520 expressed protein 1 1 19 10 At4g29580 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase homolog DesB [Arabidopsis thaliana] GI:4836444, cytidine deaminase 9 (CDA9) [Arabidopsis thaliana] GI:5080715; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 1 1 19 11 At4g29735 expressed protein contains Pfam domain PF05251: Uncharacterised protein family (UPF0197) 1 1 19 12 At4g29780 expressed protein 1 1 19 13 At4g29930 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 19 14 At4g29990 light repressible receptor protein kinase identical to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 1 1 19 15 At4g32490 plastocyanin-like domain-containing protein 1 1 19 16 At4g32551 "WD-40 repeat family protein (LEUNIG) contains seven G-protein beta WD-40 repeats; beta transducin-like protein, Podospora anserina, gb:L28125; contains Pfam profiles PF04503: Single-stranded DNA binding protein, SSDP; PF00400:WD domain, G-beta repeat; identical to cDNA LEUNIG (LEUNIG) GI:11141604" 1 1 19 17 At4g32680 expressed protein 1 1 19 18 At4g32760 "VHS domain-containing protein / GAT domain-containing protein weak similarity to hepatocyte growth factor-regulated tyrosine kinase substrate HRS isoform 2 [Homo sapiens] GI:9022389; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 1 1 19 19 At4g32890 "zinc finger (GATA type) family protein GATA transcription factor 3, Arabidopsis thaliana, gb:Y13650" 1 1 19 20 At4g32920 glycine-rich protein 1 1 19 21 At4g33080 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 1 19 22 At4g33130 expressed protein weak similarity to Max-interacting transcriptional repressor [Mus musculus] GI:1184157 1 1 19 23 AT5G57480 PC-1 A12 1 1 19 24 3XSSC PC-1 A24 1 1 19 25 AT1G29930 PC-1 E12 1 1 20 1 3XSSC PC-1 E24 1 1 20 2 AT3G44150 PC-1 I12 1 1 20 3 3XSSC PC-1 I24 1 1 20 4 AT4G00810 PC-1 M12 1 1 20 5 3XSSC PC-1 M24 1 1 20 6 At4g35740 "DNA helicase (RECQl3) identical to DNA Helicase [Arabidopsis thaliana] GI:11121447; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 1 20 7 At4g35785 "transformer serine/arginine-rich ribonucleoprotein, putative similar to transformer-SR ribonucleoprotein [Nicotiana tabacum] gi|1781299|emb|CAA70700" 1 1 20 8 At4g35920 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; isoform contains AT-acceptor splice site at intron 8" 1 1 20 9 At4g35985 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 1 1 20 10 At4g36105 expressed protein 1 1 20 11 At4g36160 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 1 1 20 12 At4g36360 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 1 1 20 13 At4g36400 "FAD linked oxidase family protein low similarity to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 1 1 20 14 At4g39050 "kinesin-related protein (MKRP2) kinesin motor protein - Ustilago maydis, PID:g2062750; identical to cDNA MKRP2 mRNA for kinesin-related protein GI:16902293, kinesin-related protein [Arabidopsis thaliana] GI:16902294" 1 1 20 15 At4g39110 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 20 16 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 1 1 20 17 At4g39280 "phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative similar to SP|Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain) (PheRS) {Homo sapiens}; contains Pfam profile PF01409: tRNA synthetases class II core domain (F)" 1 1 20 18 At4g39410 WRKY family transcription factor identical to WRKY transcription factor 13 GI:15991729 from [Arabidopsis thaliana] 1 1 20 19 At4g39470 chloroplast lumen common family protein 1 1 20 20 At4g39630 expressed protein 1 1 20 21 At4g39680 SAP domain-containing protein contains Pfam domain PF02037: SAP domain 1 1 20 22 At5g03190 expressed protein 1 1 20 23 At5g03250 "phototropic-responsive NPH3 family protein contains some similarity to root phototropism RPT2 [Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal transducer of phototropic response PMID:10662859" 1 1 20 24 At5g03420 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] 1 1 20 25 At5g03450 zinc finger (C3HC4-type RING finger) family protein 1 1 21 1 At5g03600 GDSL-motif lipase/hydrolase family protein low similarity to family II lipase EXL3 [Arabidopsis thaliana] GI:15054386; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 1 1 21 2 At5g03660 expressed protein low similarity to outer surface protein F [Borrelia burgdorferi] GI:466482; contains Pfam profile PF04949: Family of unknown function (DUF662) 1 1 21 3 At5g03840 terminal flower 1 protein (TFL1) identical go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 1 1 21 4 At5g03900 "expressed protein predicted protein, Synechocystis sp., PIR:S74969" 1 1 21 5 At5g06490 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 1 21 6 At5g06530 ABC transporter family protein 1 1 21 7 At5g06710 homeobox-leucine zipper protein 14 (HAT14) / HD-ZIP protein 14 contains similarity to homeodomain leucine zipper protein 1 1 21 8 At5g06760 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein low similarity to SP|P46515 11 kDa late embryogenesis abundant protein (DS11) {Helianthus annuus}; contains Pfam profile PF03760: Late embryogenesis abundant (LEA) group 1 1 1 21 9 At5g06930 expressed protein 1 1 21 10 At5g06980 expressed protein 1 1 21 11 At5g07130 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 1 1 21 12 At5g07190 "embryo-specific protein 3, putative similar to embryo-specific protein 3 GI:3335171 from [Arabidopsis thaliana]" 1 1 21 13 At5g10290 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 1 1 21 14 At5g10350 "polyadenylate-binding protein family protein / PABP family protein contains weak similarity to poly(A) binding protein II from [Mus musculus] GI:2351846, [Xenopus laevis] GI:11527140; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 1 21 15 At5g10510 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 1 1 21 16 At5g10570 "basic helix-loop-helix (bHLH) family protein bHLH transcription factor, Arabidopsis thaliana, EMBL:AC005167" 1 1 21 17 At5g10710 expressed protein 1 1 21 18 At5g10750 expressed protein 1 1 21 19 At5g10930 CBL-interacting protein kinase 5 (CIPK5) identical to CBL-interacting protein kinase 5 GP|9280632|gb|AAF86504 [Arabidopsis thaliana] 1 1 21 20 At5g10990 auxin-responsive family protein similar to GP:10185818 auxin-induced protein TGSAUR21 {Tulipa gesneriana) 1 1 21 21 At5g14105 expressed protein 1 1 21 22 At5g14160 F-box family protein contains F-box domain Pfam:PF00646 1 1 21 23 At5g14340 myb family transcription factor (MYB40) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 21 24 At5g14400 cytochrome P450 family protein similar to steroid 22-alpha-hydroxylase; DWF4; CYP90B1 (GI:2935342) [Arabidopsis thaliana] 1 1 21 25 At5g14560 expressed protein 1 1 22 1 At5g14600 expressed protein 1 1 22 2 At5g14780 formate dehydrogenase (FDH) identical to GI:7677266 1 1 22 3 At5g14850 "mannosyltransferase, putative similar to PIGB from Homo sapiens [gi:1552169], Mus musculus [gi:7634741]" 1 1 22 4 At5g17530 phosphoglucosamine mutase family protein low similarity to phosphoglucomutase/phosphomannomutase [Sphingomonas paucimobilis] GI:6103619; contains InterPro accession IPR006352: Phosphoglucosamine mutase 1 1 22 5 At5g17580 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 22 6 At5g17740 "AAA-type ATPase family protein h-bcs1, Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849 contains Pfam profile: ATPase family PF00004 gene_id:K17E7.100 contains Pfam profile: ATPase family PF00004" 1 1 22 7 At5g17780 "hydrolase, alpha/beta fold family protein low similarity to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}, SP|P27747|ACOC_ALCEU Dihydrolipoamide acetyltransferase component of acetoin cleaving system (EC 2.3.1.12) [Ralstonia eutropha] {Alcaligenes eutrophus}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 1 22 8 At5g17970 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 22 9 At5g18030 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 1 1 22 10 At5g18180 Gar1 RNA-binding region family protein contains Pfam profile PF04410: Gar1 protein RNA binding region 1 1 22 11 At5g18240 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 22 12 At5g20810 "auxin-responsive protein, putative / small auxin up RNA (SAUR_B) similar to indole-3-acetic acid induced protein ARG7 SP:P32295 from [Phaseolus aureus]" 1 1 22 13 At5g20870 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 [Nicotiana tabacum] 1 1 22 14 At5g21020 expressed protein 1 1 22 15 At5g21080 expressed protein predicted proteins - Arabidopsis thaliana; expression supported by MPSS 1 1 22 16 At5g21910 expressed protein ; expression supported by MPSS 1 1 22 17 At5g21970 expressed protein supported by full-length cDNA gi:22531216 from [Arabidopsis thaliana] 1 1 22 18 At5g22110 DNA polymerase epsilon subunit B family contains Pfam profile: PF04042 DNA polymerase epsilon subunit B 1 1 22 19 At5g22150 hypothetical protein 1 1 22 20 At5g24790 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 1 1 22 21 At5g24850 cryptochrome dash (CRYD) nearly identical to cryptochrome dash [Arabidopsis thaliana] GI:28971609; similar to Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)(SP:Q55081){Synechocystis sp.} 1 1 22 22 At5g25020 expressed protein 1 1 22 23 At5g25080 expressed protein 1 1 22 24 At5g25260 expressed protein 1 1 22 25 At5g25300 "F-box family protein PF0064: F-box domain; similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]" 1 1 23 1 At5g25440 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 23 2 At5g25475 expressed protein 1 1 23 3 At5g28470 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 1 23 4 At5g28510 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis thaliana] 1 1 23 5 At5g28680 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 1 23 6 At5g28760 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 1 1 23 7 At5g28910 expressed protein 1 1 23 8 At5g28970 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 1 23 9 At5g30495 expressed protein 1 1 23 10 At5g30500 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]" 1 1 23 11 At5g37480 expressed protein 1 1 23 12 At5g37520 "hypothetical protein predicted proteins, Arabidopsis thaliana" 1 1 23 13 At5g37710 "lipase class 3 family protein / calmodulin-binding heat-shock protein, putative similar to almodulin-binding heat-shock protein, common tobacco, PIR:T04107; contains Pfam profiles PF03893: Lipase 3 N-terminal region, PF01764: Lipase" 1 1 23 14 At5g37770 "touch-responsive protein / calmodulin-related protein 2, touch-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana]" 1 1 23 15 At5g37950 hypothetical protein 1 1 23 16 At5g38010 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 1 23 17 At5g38180 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 1 23 18 At5g38220 expressed protein 1 1 23 19 At5g41080 glycerophosphoryl diester phosphodiesterase family protein weak similarity to SP|P37965 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) {Bacillus subtilis}; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 1 1 23 20 At5g41120 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 1 1 23 21 At5g41310 kinesin motor protein-related 1 1 23 22 At5g41360 "DNA repair protein and transcription factor, putative (XPB2) similar to SP|P49135 TFIIH basal transcription factor complex helicase XPB subunit (EC 3.6.1.-) (Basic transcription factor 2 89 kDa subunit) {Mus musculus}; contains Pfam profile PF00271: Helicase conserved C-terminal domain; contains TIGRfam profile TIGR00603: DNA repair helicase rad25" 1 1 23 23 At5g41540 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 23 24 At5g41600 "reticulon family protein (RTNLB4) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251, SP|O95197 Reticulon protein 3 (Neuroendocrine-specific protein-like) {Homo sapiens}; contains Pfam profile PF02453: Reticulon" 1 1 23 25 At5g41740 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 24 1 At5g41790 COP1-interactive protein 1 / CIP1 almost identical to CIP1 (GI:836950) [Arabidopsis thaliana] 1 1 24 2 At5g44440 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 1 24 3 At5g44500 "small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|P27048 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Mus musculus}" 1 1 24 4 At5g44650 expressed protein 1 1 24 5 At5g44710 expressed protein similar to unknown protein (ref|NP_011731.1) 1 1 24 6 At5g44840 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Persea americana] GI:166951; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 1 1 24 7 At5g44910 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 1 24 8 At5g45060 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 1 24 9 At5g45100 expressed protein 1 1 24 10 At5g47635 expressed protein 1 1 24 11 At5g47690 expressed protein 1 1 24 12 At5g47830 expressed protein 1 1 24 13 At5g47890 "NADH-ubiquinone oxidoreductase B8 subunit, putative similar to SP|O43678 NADH-ubiquinone oxidoreductase B8 subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B8) (CI-B8) {Homo sapiens}; contains Pfam profile PF05047: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain" 1 1 24 14 At5g48070 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] " 1 1 24 15 At5g48130 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 1 24 16 At5g48300 glucose-1-phosphate adenylyltransferase small subunit 1 (APS1) / ADP-glucose pyrophosphorylase (ADG1) identical to SP|P55228 1 1 24 17 At5g48350 hypothetical protein 1 1 24 18 At5g51030 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short chain dehydrogenase/reductase SDR family 1 1 24 19 At5g51090 hypothetical protein 1 1 24 20 At5g51230 embryonic flower 2 (EMF2) identical to embryonic flower 2 [Arabidopsis thaliana] GI:14276050; supporting cDNA gi|14276049|dbj|AB053171.1| 1 1 24 21 At5g51280 "DEAD-box protein abstrakt, putative " 1 1 24 22 At5g51440 "23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) similar to heat shock 22 kDa protein, mitochondrial precursor SP:Q96331 from [Arabidopsis thaliana]; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 1 1 24 23 At5g51500 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 1 24 24 At5g51640 leaf senescence protein-related (YLS7 ) annotation temporarily based on supporting cDNA gi|13122291|dbj|AB047810.1|; identical to cDNA YLS7 leaf-senescence-related protein GI:13122291 1 1 24 25 At5g51700 RAR1 disease resistance protein (RAR1) Contains a 3 nt micro-exon at exon 2. 1 1 25 1 At5g54450 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 1 1 25 2 At5g54510 "auxin-responsive GH3 protein, putative (DFL-1) identical to auxin-responsive GH3 homologue [Arabidopsis thaliana] GI:11041726; similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter" 1 1 25 3 At5g54640 histone H2A identical to histone H2A Arabidopsis thaliana GI:7595337 1 1 25 4 At5g54700 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 1 1 25 5 At5g54850 expressed protein 1 1 25 6 At5g54900 "RNA-binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protein 5" 1 1 25 7 At5g55040 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 1 1 25 8 At5g55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam domain PF01805: Surp module 1 1 25 9 At5g57780 expressed protein similar to unknown protein (emb CAB79759.1) 1 1 25 10 At5g57820 hypothetical protein 1 1 25 11 At5g57960 GTP-binding family protein similar to SP|P25519 GTP-binding protein hflX {Escherichia coli} 1 1 25 12 At5g58010 "basic helix-loop-helix (bHLH) family protein bHLH transcription factor GBOF-1, Tulipa gesneriana, EMBL:AF185269; contains Pfam profile PF00010: Helix-loop-helix DNA-binding domain" 1 1 25 13 At5g58180 SNARE protein-related similar to SNARE protein Ykt6 [Homo sapiens] GI:2507637 1 1 25 14 At5g58230 WD-40 repeat protein (MSI1) contains 6 WD-40 repeats (PF0400); identical to WD-40 repeat protein (SP:O22467) [Arabidopsis thaliana] 1 1 25 15 At5g58370 expressed protein 1 1 25 16 At5g58400 "peroxidase, putative similar to peroxidase [Nicotiana tabacum] gi|5381253|dbj|BAA82306" 1 1 25 17 At5g61000 "replication protein, putative similar to replication protein A1 [Oryza sativa] GI:2258469; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain" 1 1 25 18 At5g61050 histone deacetylase-related / HD-related 1 1 25 19 At5g61210 SNAP25 homologous protein SNAP33 (SNAP33) (SNAP33B) / synaptosomal-associated protein SNAP25-like 1 / snap25a identical to SNAP25 homologous protein SNAP33 (AtSNAP33) (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a) (Swiss-Prot:Q9S7P9) [Arabidopsis thaliana] 1 1 25 20 At5g61270 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 1 25 21 At5g61420 myb family transcription factor (MYB28) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 1 25 22 At5g61470 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 1 1 25 23 At5g61605 expressed protein 1 1 25 24 At5g61660 glycine-rich protein 1 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 1 1 26 1 At5g64400 "expressed protein contains Pfam domain, PF04933: Protein of unknown function (DUF657)" 1 1 26 2 At5g64540 hypothetical protein 1 1 26 3 At5g64590 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 1 1 26 4 At5g64720 hypothetical protein 1 1 26 5 At5g64780 expressed protein similar to unknown protein (pir||T04031) 1 1 26 6 At5g64910 expressed protein ; expression supported by MPSS 1 1 26 7 At5g64970 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 1 26 8 At5g67480 "TAZ zinc finger family protein / BTB/POZ domain-containing protein contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger; simiar to Chain A, Taz2 Domain Of The Transcriptional Adaptor Protein Cbp (GI:11514507) [Homo sapiens]; similar to (SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo sapiens]; similar to histone acetyltransferase HAC4 (GI:21105785) [Arabidopsis thaliana]" 1 1 26 9 At5g67530 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 1 26 10 At1g47700 hypothetical protein 1 1 26 11 At2g24945 expressed protein 1 1 26 12 ath-MIR167d miRNA gene Arabidopsis thaliana miR167d stem-loop 1 1 26 13 ath-MIR156b miRNA gene Arabidopsis thaliana miR156b stem-loop 1 1 26 14 ath-MIR168a miRNA gene Arabidopsis thaliana miR168a stem-loop 1 1 26 15 ath-MIR171c miRNA gene Arabidopsis thaliana miR171c stem-loop 1 1 26 16 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 1 26 17 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 26 18 Alien5 Control: Stratagene Spotreport Alien Oligo 1 1 26 19 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 1 26 20 atc07 Randomly generated negative control 1 1 26 21 Alien1 Control: Stratagene Spotreport Alien Oligo 1 1 26 22 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 1 26 23 atc03 Randomly generated negative control 1 1 26 24 Blank Blank 1 1 26 25 Blank Blank 1 2 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 1 2 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 2 1 5 atc07 Randomly generated negative control 1 2 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 1 2 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 1 8 atc03 Randomly generated negative control 1 2 1 9 At1g02740 MRG family protein member of Pfam PF05712: MRG; similar to Transcription factor-like protein MRG15 (MORF-related gene 15 protein) (MSL3-1 protein) (Protein HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens} 1 2 1 10 At1g02810 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 2 1 11 At1g02900 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 1 2 1 12 At1g02950 "glutathione S-transferase, putative similar to glutathione-S-transferase GI:169887 from [Silene vulgaris]" 1 2 1 13 At1g03055 expressed protein 1 2 1 14 At1g03100 pentatricopeptide (PPR) repeat-containing protein low similarity to CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat 1 2 1 15 At1g03260 expressed protein 1 2 1 16 At1g03320 hypothetical protein 1 2 1 17 At1g06000 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains similarity to UDPG glucosyltransferase GB:AAB62270 GI:2232354 from [Solanum berthaultii] 1 2 1 18 At1g06040 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger 1 2 1 19 At1g06170 basic helix-loop-helix (bHLH) family protein contains Pfam profile:PF00010 helix-loop-helix DNA-binding domain 1 2 1 20 At1g06225 Clavata3 / ESR-Related-3 (CLE3) CLAVATA3/ESR-Related 3 (CLE3) 1 2 1 21 At1g06410 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 1 2 1 22 At1g06470 "phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275" 1 2 1 23 At1g06640 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 1 2 1 24 At1g06690 "aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 1 2 1 25 At1g09190 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 2 1 At1g09245 expressed protein 1 2 2 2 At1g09410 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 2 3 At1g09460 "glucan endo-1,3-beta-glucosidase-related similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 1 2 2 4 At1g09600 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 2 2 5 At1g09650 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 2 2 6 At1g09800 tRNA pseudouridine synthase family protein contains Pfam profile PF01416: tRNA pseudouridine synthase 1 2 2 7 At1g09840 shaggy-related protein kinase kappa / ASK-kappa (ASK10) identical to shaggy-related protein kinase kappa SP:Q39019 GI:717180 from [Arabidopsis thaliana] 1 2 2 8 At1g12420 ACT domain-containing protein (ACR8) contains Pfam ACT domain PF01842 1 2 2 9 At1g12460 "leucine-rich repeat transmembrane protein kinase, putative " 1 2 2 10 At1g12660 hypothetical protein 1 2 2 11 At1g12730 cell division cycle protein-related contains 10 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 1 2 2 12 At1g12880 MutT/nudix family protein similar to diphosphoinositol polyphosphate phosphohydrolase [Homo sapiens] GI:3978224; contains Pfam profile PF00293: NUDIX domain 1 2 2 13 At1g12940 "high-affinity nitrate transporter, putative similar to trans-membrane nitrate transporter protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058, high-affinity nitrate transporter ACH1 [Arabidopsis thaliana] GI:3608362" 1 2 2 14 At1g13120 expressed protein contains Prosite PS00012: Phosphopantetheine attachment site; similar to GLE1 (GI:3288817) {Homo sapiens}; EST gb|N37870 comes from this gene 1 2 2 15 At1g13180 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin 1 2 2 16 At1g15825 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 2 17 At1g15880 Golgi SNARE 11 protein identical to Golgi SNARE 11 protein (GI:13898893) {Arabidopsis thaliana}; similar to putative cis-Golgi SNARE protein GI:2583133 from [Arabidopsis thaliana];similar toSP|O95249| 28 kDa Golgi SNARE protein (28 kDa cis-Golgi SNARE p28) (GOS-28). [Homo sapiens]; similar to Golgi SNARE protein (Golgi SNAP receptor complex member 1) (28 kDa cis-Golgi SNARE p28) (GOS-28) (SP:Q62931) {Rattus norvegicus} 1 2 2 18 At1g16025 hypothetical protein 1 2 2 19 At1g16070 tubby family protein similar to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:Q9Z273) [Mus musculus]; low similarity to Tubby related protein 1 (Tubby-like protein 1) (Swiss-Prot:O0029) {Homo sapiens}; similar to phosphodiesterase (GI:467578) [Mus musculus]; contains Pfam profile PF01167: Tub family 1 2 2 20 At1g16260 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 2 2 21 At1g16320 "expressed protein ESTs gb|T76348, gb|N65615 and gb|Z18119 come from this gene" 1 2 2 22 At1g16480 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 2 23 At1g16530 LOB domain protein 3 / lateral organ boundaries domain protein 3 (LBD3) identical to SP|Q9SA51 LOB domain protein 3 {Arabidopsis thaliana}; identical to ASYMMETRIC LEAVES2-like protein 9 [Arabidopsis thaliana] GI:19918989 1 2 2 24 At1g19330 expressed protein 1 2 2 25 At1g19390 "wall-associated kinase, putative similar to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol. Biol. 39 (6), 1189-1196 (1999))" 1 2 3 1 At1g19540 "isoflavone reductase, putative similar to SP|P52577; contains isoflavone reductase domain PF02716" 1 2 3 2 At1g19620 expressed protein 1 2 3 3 At1g19800 expressed protein contains Pfam PF02405: Domain of unknown function DUF140; similar to TOLUENE TOLERANCE PROTEIN TTG2B {Brucella melitensis 16M} (GI:17982923) 1 2 3 4 At1g19870 calmodulin-binding family protein contains Pfam profile: PF00612 IQ calmodulin-binding motif 1 2 3 5 At1g20060 kinesin motor protein-related 1 2 3 6 At1g20120 "family II extracellular lipase, putative similar to family II lipase EXL3 GI:15054386, SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 2 3 7 At1g22890 expressed protein 1 2 3 8 At1g22920 "COP9 signalosome subunit 5B / CSN subunit 5B (CSN5B) / c-JUN coactivator protein AJH1, putative (AJH1) COP9 complex subunit CSN5-1; identical to Arabidopsis homologs of a c-Jun coactivator AJH1 GI:3641314 from [Arabidopsis thaliana]; identical to cDNA CSN complex subunit 5B (CSN5B) GI:18056662; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family" 1 2 3 9 At1g23060 expressed protein Location of EST gb|T22158 and gb|AA395675 1 2 3 10 At1g23100 "10 kDa chaperonin, putative similar to 10 kDa chaperonin SP:P34893 from [Arabidopsis thaliana]" 1 2 3 11 At1g23250 "caleosin-related similar to calcium-binding RD20 protein [Arabidopsis thaliana] GI:10862968, caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]" 1 2 3 12 At1g23310 "glutamate:glyoxylate aminotransferase 1 (GGT1) identical to glutamate:glyoxylate aminotransferase 1 [Arabidopsis thaliana] GI:24461827; similar to alanine aminotransferase GI:4730884 from [Oryza sativa]; contains Pfam profile PF00155: aminotransferase, classes I and II" 1 2 3 13 At1g23450 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 3 14 At1g23500 "GDSL-motif lipase, putative similar to family II lipase EXL6 (GI:15054390), EXL4 (GI:15054388) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 1 2 3 15 At1g27190 "leucine-rich repeat transmembrane protein kinase, putative similar to CLV1 receptor kinase GB:AAB58929 GI:2160756 from [Arabidopsis thaliana]" 1 2 3 16 At1g27260 paired amphipathic helix repeat-containing protein low similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 1 2 3 17 At1g27390 mitochondrial import receptor subunit TOM20-2 (TOM20-2) identical to mitochondrial import receptor subunit TOM20-2 SP:P82873 from [Arabidopsis thaliana] 1 2 3 18 At1g27440 exostosin family protein contains Pfam profile: PF03016 exostosin family 1 2 3 19 At1g27595 expressed protein similar to Symplekin (SP:Q92797) {Homo sapiens} 1 2 3 20 At1g27640 expressed protein 1 2 3 21 At1g27790 "hypothetical protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730" 1 2 3 22 At1g27860 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 1 2 3 23 At1g30790 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 2 3 24 At1g30835 expressed protein 1 2 3 25 At1g31020 "thioredoxin o (TRXO2) similar to thioredoxin 2 from Saccharomyces cerevisiae GI:173050, 3'-end of protein contains similarity to thioredoxins; contains Pfam profile: PF00085 Thioredoxin; identical to cDNA thioredoxin o (TRXO2) GI:15081458" 1 2 4 1 At1g31080 F-box family protein contains Pfam profile: PF00646 F-box domain 1 2 4 2 At1g31270 hypothetical protein 1 2 4 3 At1g31330 photosystem I reaction center subunit III family protein contains Pfam profile: PF02507: photosystem I reaction center subunit III 1 2 4 4 At1g31500 endonuclease/exonuclease/phosphatase family protein low similarity to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 4 5 At1g31550 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 4 6 At1g34590 hypothetical protein 1 2 4 7 At1g34710 "hypothetical protein similar to At3g43370, At2g14780, At1g27810, At3g42760, At1g25784, At4g08890" 1 2 4 8 At1g35140 "phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region" 1 2 4 9 At1g35190 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to hyoscyamine 6-dioxygenase hydroxylase from Hyoscyamus niger [GB:P24397][SP|P24397], Atropa belladona [gi:4996123]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily" 1 2 4 10 At1g35420 dienelactone hydrolase family protein low similarity to dienelactone hydrolase [Rhodococcus opacus] GI:23094407; contains Pfam profile PF01738: Dienelactone hydrolase family 1 2 4 11 At1g35500 hypothetical protein 1 2 4 12 At1g35650 "Ulp1 protease family protein PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g21020, At3g26530, At1g08760, At1g08740, At2g29240" 1 2 4 13 At1g35720 annexin 1 (ANN1) identical to annexin (AnnAt1) [Arabidopsis thaliana] GI:4959106 1 2 4 14 At1g47340 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 15 At1g47400 expressed protein 1 2 4 16 At1g47570 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger)" 1 2 4 17 At1g47640 expressed protein similar to seven transmembrane domain protein GI:3550427 from [Homo sapiens] 1 2 4 18 At1g47800 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 19 At1g47830 "clathrin coat assembly protein, putative similar to clathrin coat assembly protein AP17 GB:CAA65533 GI:2959358 from [Zea mays]; contains Pfam profile: PF01217 clathrin adaptor complex small chain" 1 2 4 20 At1g48040 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase-2C GB:AAC36698 GI:3643085 from [Mesembryanthemum crystallinum] 1 2 4 21 At1g48095 hypothetical protein 1 2 4 22 At1g51130 expressed protein similar to unknown protein GI:9294403 from [Arabidopsis thaliana] 1 2 4 23 At1g51200 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 1 2 4 24 At1g51370 F-box family protein contains F-box domain Pfam:PF00646 1 2 4 25 At1g51405 "myosin-related low similarity to nonmuscle myosin heavy chain from Gallus gallus [GI:212449], Xenopus laevis [GI:214624], Homo sapiens [GI:641958]" 1 2 5 1 At1g51560 expressed protein 1 2 5 2 At1g51600 zinc finger (GATA type) family protein contains similarity to zinc-finger protein ZIM [Arabidopsis thaliana] gi|8918533|dbj|BAA97679; contains Pfam PF00320: GATA zinc finger 1 2 5 3 At1g51740 "syntaxin 81 (SYP81) identical to SP|P59277 Syntaxin 81 (AtSYP81) {Arabidopsis thaliana}; identified as syntaxin SYP81 by Sanderfoot, A.A., et al in Plant Physiol. 124:1558-69 (2000); similar to Syntaxin 18 (SP:Q9P2W9){Homo sapiens}" 1 2 5 4 At1g51800 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 1 2 5 5 At1g54410 "dehydrin family protein contains Pfam domain, PF00257: Dehydrin" 1 2 5 6 At1g54470 hypothetical protein 1 2 5 7 At1g54650 expressed protein similar to Actin-binding protein ABP140 (Swiss-Prot:Q08641) [Saccharomyces cerevisiae] 1 2 5 8 At1g54730 "sugar transporter, putative similar to ERD6 protein [Arabidopsis thaliana] GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 1 2 5 9 At1g54870 short-chain dehydrogenase/reductase (SDR) family protein C-terminal similar to dormancy related protein GI:1220178 from [Trollius ledebourii] 1 2 5 10 At1g54926 hypothetical protein 1 2 5 11 At1g55090 "carbon-nitrogen hydrolase family protein low similarity to SP|P71911 Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) {Mycobacterium tuberculosis}; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 1 2 5 12 At1g55160 expressed protein 1 2 5 13 At1g59640 basic helix-loop-helix (bHLH) family protein 1 2 5 14 At1g59690 hypothetical protein 1 2 5 15 At1g59835 hypothetical protein 1 2 5 16 At1g59865 expressed protein 1 2 5 17 At1g60010 expressed protein 1 2 5 18 At1g60080 "3' exoribonuclease family domain 1-containing protein similar to SP|Q96B26 Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA processing protein 43) {Homo sapiens}; contains Pfam profile PF01138: 3' exoribonuclease family, domain 1" 1 2 5 19 At1g60340 apical meristem formation protein-related contains similarity to CUC1 [Arabidopsis thaliana] gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida] gi|1279640|emb|CAA63101 1 2 5 20 At1g60400 F-box family protein contains F-box domain Pfam:PF00646 1 2 5 21 At1g63250 "DEAD box RNA helicase, putative similar to RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 1 2 5 22 At1g63290 "ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family" 1 2 5 23 At1g63470 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 1 2 5 24 At1g63540 hydroxyproline-rich glycoprotein family protein 1 2 5 25 At1g63680 "Mur ligase family protein contains Pfam profile: PF01225 Mur ligase family, catalytic domain" 1 2 6 1 At1g63720 expressed protein similar to putative protein GB:CAA18164 [Arabidopsis thaliana] 1 2 6 2 At1g63855 expressed protein 1 2 6 3 At1g63940 "monodehydroascorbate reductase, putative similar to monodehydroascorbate reductase GB:AAD28178 [Brassica juncea]" 1 2 6 4 At1g66720 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 1 2 6 5 At1g66760 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 1 2 6 6 At1g66940 protein kinase-related 1 2 6 7 At1g66980 "protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein similar to leaf rust resistance kinase Lr10 GI:1680685 from [Triticum aestivum]; contains Pfam profiles PF03009: Glycerophosphoryl diester phosphodiesterase family, PF00069: Protein kinase domain" 1 2 6 8 At1g67140 expressed protein 1 2 6 9 At1g67210 "proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein contains Pfam domains PF00098: Zinc knuckle, PF04046: PSP" 1 2 6 10 At1g67370 "meiotic asynaptic mutant 1 (ASY1) identical to meiotic asynaptic mutant 1 [Arabidopsis thaliana] GI:7939627; contains Pfam profiles PF02301: DNA-binding HORMA domain, PF04433: SWIRM domain" 1 2 6 11 At1g67440 "expressed protein contains Pfam domain PF03193: Protein of unknown function, DUF258" 1 2 6 12 At1g70090 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 1 2 6 13 At1g70130 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733" 1 2 6 14 At1g70300 "potassium transporter, putative similar to potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 1 2 6 15 At1g70360 F-box protein-related 1 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 1 2 6 17 At1g70540 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 1 2 6 18 At1g70690 kinase-related contains Pfam PF01657:Domain of unknown function; similar to receptor-like protein kinase 4 GI:13506745 [Arabidopsis thaliana] 1 2 6 19 At1g70750 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593; supporting cDNA gi|4101563|gb|AF004556.1|AF004556" 1 2 6 20 At1g73600 "phosphoethanolamine N-methyltransferase 3, putative (NMT3) strong similarity to SP|Q9FR44 Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to SP|Q9C6B9 Putative phosphoethanolamine N-methyltransferase 3 {Arabidopsis thaliana}" 1 2 6 21 At1g73640 Ras-related GTP-binding family protein contains Pfam profile: PF00071 ras family Pfam profile: PF00071 Ras family 1 2 6 22 At1g73780 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 2 6 23 At1g73830 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 2 6 24 At1g73990 peptidase U7 family protein similar to protease IV GB:AAA57008 from [Escherichia coli]; contains Pfam profile PF01343: Peptidase family U7 1 2 6 25 At1g74045 hypothetical protein 1 2 7 1 At1g74210 glycerophosphoryl diester phosphodiesterase family protein low similarity to glycerophosphodiester phosphodiesterase [Borrelia hermsii] GI:1399038; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 1 2 7 2 At1g74270 60S ribosomal protein L35a (RPL35aC) similar to ribosomal protein L33B GB:NP_014877 from [Saccharomyces cerevisiae] 1 2 7 3 AT5G57480 PC-1 B12 1 2 7 4 3XSSC PC-1 B24 1 2 7 5 AT1G29930 PC-1 F12 1 2 7 6 3XSSC PC-1 F24 1 2 7 7 AT3G44150 PC-1 J12 1 2 7 8 3XSSC PC-1 J24 1 2 7 9 AT4G00810 PC-1 N12 1 2 7 10 3XSSC PC-1 N24 1 2 7 11 At1g77060 mutase family protein similar to carboxyvinyl-carboxyphosphonate phosphorylmutase GB:O49290 from [Arabidopsis thaliana]; similar to carboxyphosphonoenolpyruvate mutase (GI:47149) [Streptomyces hygroscopicus]; contains Prosite PS00161: Isocitrate lyase signature 1 2 7 12 At1g77090 thylakoid lumenal 29.8 kDa protein identical to SP|O49292|TL30_ARATH (Arabidopsis thaliana);contains a PsbP domain AF370571; SIMILAR TO GI:13926195--F22K20.16 1 2 7 13 At1g77260 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 1 2 7 14 At1g77320 BRCT domain-containing protein contains Pfam profile PF00533: BRCA1 C Terminus (BRCT) domain 1 2 7 15 At1g77480 "nucellin protein, putative similar to nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare] (nucellin: similar to aspartic protease and its specific expression in nucellar cells during degeneration)" 1 2 7 16 At1g77540 expressed protein similar to GB:AAD41433 1 2 7 17 At1g77720 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 7 18 At1g77770 expressed protein 1 2 7 19 At1g80320 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 2 7 20 At1g80380 phosphoribulokinase/uridine kinase-related 1 2 7 21 At1g80530 "nodulin family protein similar to nodulin-like protein [Arabidopsis thaliana] GI:3329368, nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366" 1 2 7 22 At1g80590 WRKY family transcription factor similar to zinc finger transcription factor WRKY1 GB:AAF23898 from (Oryza sativa) 1 2 7 23 At1g80770 expressed protein 1 2 7 24 At1g80830 "NRAMP metal ion transporter 1 (NRAMP1) identical to NRAMP1 protein [Arabidopsis thaliana] gi|7108911|gb|AAF36535; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 1 2 7 25 At1g80960 F-box protein-related contains weak hit to Pfam PF00646: F-box domain 1 2 8 1 At2g01060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 2 8 2 At2g04025 expressed protein 1 2 8 3 At2g04039 expressed protein 1 2 8 4 At2g04235 "expressed protein weak similarity to neurofilament protein (GI:161292) [Loligo pealei]; weak similarity to Glucoamylase S1/S2 precursor (EC 3.2.1.3) (Glucan 1,4-alpha- glucosidase) (1,4-alpha-D-glucan glucohydrolase) (Swiss-Prot:P08640) [Saccharomyces cerevisiae]" 1 2 8 5 At2g04305 magnesium transporter CorA-like protein-related 1 2 8 6 At2g04495 expressed protein 1 2 8 7 At2g04550 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 1 2 8 8 At2g04780 fasciclin-like arabinogalactan-protein (FLA7) identical to gi_13377782_gb_AAK20860 1 2 8 9 At2g04830 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; confirmed by FLcDNA GI:16604421; contains uncharacterized Arabidoppsis domain shared by 33 Arabidopsis proteins" 1 2 8 10 At2g11775 expressed protein 1 2 8 11 At2g11910 expressed protein 1 2 8 12 At2g12550 ubiquitin-associated (UBA)/TS-N domain-containing protein low similarity to NUB1 (NEDD8-interacting protein) [Homo sapiens] GI:13383476; contains Pfam profile PF00627: UBA/TS-N domain 1 2 8 13 At2g12880 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 1 2 8 14 At2g13370 "chromodomain-helicase-DNA-binding family protein / CHD family protein similar to SP|O14647 Chromodomain-helicase-DNA-binding protein 2 (CHD-2) {Homo sapiens}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00385: 'chromo' (CHRromatin Organization MOdifier)" 1 2 8 15 At2g13540 mRNA cap-binding protein (ABH1) identical to mRNA cap binding protein [Arabidopsis thaliana] GI:15192738; contains Pfam profile PF02854: MIF4G domain; identical to cDNA nuclear cap-binding protein CBP80 GI:8515770 1 2 8 16 At2g13770 hypothetical protein 1 2 8 17 At2g13820 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 2 8 18 At2g17140 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 8 19 At2g17200 "ubiquitin family protein weak similarity to PLIC-2 (ubiquitin-like type II) [Homo sapiens] GI:9937505; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 1 2 8 20 At2g17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 / HMG-CoA reductase 2 (HMGR2) identical to SP|P43256 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (EC 1.1.1.34) (HMG- CoA reductase 2) (HMGR2) {Arabidopsis thaliana} 1 2 8 21 At2g17440 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeats 1 2 8 22 At2g17640 "serine O-acetyltransferase, putative (SAT-106) similar to Arabidopsis thaliana serine acetyltransferase GI:905391" 1 2 8 23 At2g17690 F-box family protein contains F-box domain Pfam:PF00646 1 2 8 24 At2g17840 senescence/dehydration-associated protein-related (ERD7) similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; strong similarity to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916; identical to cDNA ERD7 partial cds GI:15320411 1 2 8 25 At2g17890 "calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand" 1 2 9 1 At2g20630 "protein phosphatase 2C, putative / PP2C, putative " 1 2 9 2 At2g20670 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 1 2 9 3 At2g20805 hypothetical protein 1 2 9 4 At2g20825 expressed protein 1 2 9 5 At2g20950 expressed protein 1 2 9 6 At2g21030 expressed protein 1 2 9 7 At2g21190 ER lumen protein retaining receptor family protein similar to SP|P33948 ER lumen protein retaining receptor. {Plasmodium falciparum}; contains Pfam profile PF00810: ER lumen protein retaining receptor 1 2 9 8 At2g21230 bZIP family transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036) 1 2 9 9 At2g24060 "translation initiation factor 3 (IF-3) family protein similar to SP|P33319 Translation initiation factor IF-3 {Proteus vulgaris}; contains Pfam profiles PF00707: Translation initiation factor IF-3, C-terminal domain, PF05198: Translation initiation factor IF-3, N-terminal domain" 1 2 9 10 At2g24130 "leucine-rich repeat transmembrane protein kinase, putative " 1 2 9 11 At2g24300 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 1 2 9 12 At2g24360 "serine/threonine/tyrosine kinase, putative similar to serine/threonine/tyrosine kinase [Arachis hypogaea] gi|13124865|gb|AAK11734" 1 2 9 13 At2g24540 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 4 [Arabidopsis thaliana] GI:10716953; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 2 9 14 At2g24600 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 1 2 9 15 At2g24780 hypothetical protein 1 2 9 16 At2g24830 "zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 2 9 17 At2g27520 F-box family protein contains Pfam profile: PF00646 F-box domain 1 2 9 18 At2g27580 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 1 2 9 19 At2g27750 "nucleolar matrix protein-related contains Pfam domain, PF04935: Surfeit locus protein 6" 1 2 9 20 At2g27780 expressed protein 1 2 9 21 At2g27960 cyclin-dependent kinase / CDK (CKS1) identical to Cks1 protein [Arabidopsis thaliana] gi|2274859|emb|CAA03859 1 2 9 22 At2g28020 hypothetical protein 1 2 9 23 At2g28170 "cation/hydrogen exchanger, putative (CHX7) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 9 24 At2g28230 expressed protein 1 2 9 25 At2g30950 FtsH protease (VAR2) identical to zinc dependent protease VAR2 GI:7650138 from [Arabidopsis thaliana] 1 2 10 1 At2g31010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 10 2 At2g31150 expressed protein 1 2 10 3 At2g31210 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; PMID: 12679534 1 2 10 4 At2g31360 delta 9 desaturase (ADS2) identical to delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from [Arabidopsis thaliana] 1 2 10 5 At2g31400 "pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587, post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat" 1 2 10 6 At2g31570 "glutathione peroxidase, putative " 1 2 10 7 At2g31610 40S ribosomal protein S3 (RPS3A) 1 2 10 8 At2g34240 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 1 2 10 9 At2g34280 S locus F-box-related / SLF-related contains Pfam PF00646: F-box domain; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 1 2 10 10 At2g34390 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; an isoform contains a non-consensus GA-AG intron 1 2 10 11 At2g34420 chlorophyll A-B binding protein / LHCII type I (LHB1B2) identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16364 1 2 10 12 At2g34580 hypothetical protein 1 2 10 13 At2g34630 "geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative identical to GI:11322965 A. thaliana geranyl diphosphate synthase" 1 2 10 14 At2g34810 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 2 10 15 At2g34870 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 10 16 At2g37440 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 10 17 At2g37510 "RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein {Zea mays}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 2 10 18 At2g37660 expressed protein 1 2 10 19 At2g37720 expressed protein 1 2 10 20 At2g37870 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 2 10 21 At2g37925 copper transporter family protein similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family; supporting cDNA gi|18496855|gb|AF466372.1| 1 2 10 22 At2g38080 "laccase, putative / diphenol oxidase, putative similar to diphenol oxidase [Nicotiana tabacum][GI:1685087]" 1 2 10 23 At2g38140 chloroplast 30S ribosomal protein S31 (PSRP4) 1 2 10 24 At2g40680 hypothetical protein 1 2 10 25 At2g40740 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 2 11 1 At2g40890 "cytochrome P450 98A3, putative (CYP98A3) identical to Cytochrome P450 98A3 (SP|O22203) [Arabidopsis thaliana]; similar to gi:17978651 from Pinus taeda" 1 2 11 2 At2g40925 F-box family protein contains F-box domain Pfam:PF00646 1 2 11 3 At2g41060 RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 2 11 4 At2g41110 calmodulin-2/3/5 (CAM2) (CAL1) almost identical to Calmodulin-2/3/5 SP:P25069 from [Arabidopsis thaliana] 1 2 11 5 At2g41260 glycine-rich protein / late embryogenesis abundant protein (M17) identical to late-embryogenesis abundant M17 protein GI:3342551 from [Arabidopsis thaliana] 1 2 11 6 At2g41340 "eukaryotic rpb5 RNA polymerase subunit family protein similar to SP|Q09191 DNA-directed RNA polymerases II 24 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF03871: RNA polymerase Rpb5 N-terminal domain, PF01191: RNA polymerase Rpb5 C-terminal domain" 1 2 11 7 At2g43940 "thiol methyltransferase, putative similar to thiol methyltransferase 2 GI:14583121 from [Brassica oleracea]" 1 2 11 8 At2g43960 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein contains Pfam profile: PF01805 surp module 1 2 11 9 At2g44080 expressed protein 1 2 11 10 At2g44130 "kelch repeat-containing F-box family protein very low similarity to SP|Q9ER30 Kelch-related protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 2 11 11 At2g44290 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3) similar to lipid transfer protein Picea abies GI:2627141; contains Pfam profile: PF00234: Protease inhibitor/seed storage/LTP family; identical to cDNA YLS3 mRNA for non-specific lipid transfer protein (nLTP) like protein, partial cds GI:13122283" 1 2 11 12 At2g44360 expressed protein 1 2 11 13 At2g44520 "UbiA prenyltransferase family protein similar to SP|Q12887 Protoheme IX farnesyltransferase, mitochondrial precursor (EC 2.5.1.-) (Heme O synthase) {Homo sapiens}, SP|P21592 COX10 {Saccharomyces cerevisiae}" 1 2 11 14 At2g44570 glycosyl hydrolase family 9 protein 1 2 11 15 At2g47240 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein similar to GI:1617270 (MF7P) and gi:1617628 (MF45P) from [Brassica napus] ; contains Pfam AMP-binding enzyme domain PF00501 1 2 11 16 At2g47300 hypothetical protein 1 2 11 17 At2g47470 thioredoxin family protein similar to protein disulfide isomerase [Dictyostelium discoideum] GI:2627440; contains Pfam profile: PF00085 Thioredoxin 1 2 11 18 At2g47500 kinesin motor protein-related 1 2 11 19 At2g47660 hypothetical protein 1 2 11 20 At2g47720 expressed protein 1 2 11 21 At2g47890 zinc finger (B-box type) family protein 1 2 11 22 At2g47910 expressed protein 1 2 11 23 At3g03250 "UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative strong similarity to SP|P19595 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum}; contains Pfam profile PF01704: UTP--glucose-1-phosphate uridylyltransferase" 1 2 11 24 At3g03290 universal stress protein (USP) family protein contains Pfam profile: PF00582 universal stress protein family 1 2 11 25 At3g03460 hypothetical protein 1 2 12 1 At3g03520 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 1 2 12 2 At3g03700 "expressed protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 1 2 12 3 At3g03750 "SET domain-containing protein low similarity to G9a [Homo sapiens] GI:287865; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif" 1 2 12 4 At3g03890 expressed protein 1 2 12 5 At3g03940 "protein kinase family protein contains Pfam domains, PF00069: Protein kinase domain" 1 2 12 6 At3g06455 "splicing factor-related contains weak similarity to Swiss-Prot:Q12874 splicing factor 3A subunit 3 (Spliceosome associated protein 61, SAP 61, SF3a60) [Homo sapiens]" 1 2 12 7 At3g06500 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 1 2 12 8 At3g06640 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 2 12 10 At3g06790 "plastid developmental protein DAG, putative similar to DAG protein, chloroplast precursor [Garden snapdragon] SWISS-PROT:Q38732" 1 2 12 11 At3g06860 "fatty acid multifunctional protein (MFP2) identical to fatty acid multifunctional protein (AtMFP2) GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty acid beta-oxidation); contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase)" 1 2 12 12 At3g07020 UDP-glucose:sterol glucosyltransferase (UGT80A2) identical to UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] GI:2462931; contains Pfam profile: PF03033 glycosyltransferase family 28 N-terminal domain 1 2 12 13 At3g07070 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 12 14 At3g10110 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to TIM22 preprotein translocase [Rattus norvegicus] GI:6760457; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17 1 2 12 15 At3g10150 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 2 12 16 At3g10300 calcium-binding EF hand family protein low similarity to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 2 12 17 At3g10350 anion-transporting ATPase family protein similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase; contains non-consensus GA donor splice site at intron 5 1 2 12 18 At3g10490 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 1 2 12 19 At3g10530 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); BING4 (gi:3811380) {Mus musculus]; similar to hypothetical protein GB:P40055 [Saccharomyces cerevisiae] 1 2 12 20 At3g10660 "calcium-dependent protein kinase isoform 2 (CPK2) identical to calcium-dependent protein kinase isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 1 2 12 21 At3g10720 "pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase" 1 2 12 22 At3g13150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 12 23 At3g13190 "myosin heavy chain-related contains weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P05659) [Acanthamoeba castellanii]" 1 2 12 24 At3g13280 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 1 2 12 25 At3g13340 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (3 copies, 1 significant); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces]" 1 2 13 1 At3g13500 hypothetical protein 1 2 13 2 At3g13560 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 1 2 13 3 At3g13674 expressed protein 1 2 13 4 At3g13700 "RNA-binding protein, putative similar to mec-8 [Caenorhabditis elegans] GI:1370048; contains Pfam profile:PF00076 rrm:RNA recognition motif" 1 2 13 5 At3g16180 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 2 13 6 At3g16240 "delta tonoplast integral protein (delta-TIP) identical to delta tonoplast integral protein (delta-TIP) (GI:9279707)(GB:U39485) [Arabidopsis thaliana] (Plant Cell 8 (4), 587-599 (1996))" 1 2 13 7 At3g16440 jacalin lectin family protein contains Pfam profile: PF01419 jacalin-like lectin domain; similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767 1 2 13 8 At3g16480 "mitochondrial processing peptidase alpha subunit, putative similar to mitochondrial processing peptidase alpha subunit, mitochondrial precursor, Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II) [Potato] SWISS-PROT:P29677" 1 2 13 9 At3g16610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 13 10 At3g16670 expressed protein 1 2 13 11 At3g16830 WD-40 repeat family protein contains 10 WD-40 repeats (PF00400) (1 weak) 1 2 13 12 At3g16870 zinc finger (GATA type) family protein contains Pfam profile:PF00320 GATA:GATA zinc finger 1 2 13 13 At3g19515 expressed protein 1 2 13 14 At3g19553 amino acid permease family protein weak similarity to aspartate/glutamate transporter 1 [Mus musculus] GI:21322754; contains Pfam profile PF00324: Amino acid permease 1 2 13 15 At3g19710 "branched-chain amino acid aminotransferase, putative / branched-chain amino acid transaminase, putative (BCAT4) similar to branched-chain amino acid transaminase 6 [Arabidopsis thaliana] GI:13810195; contains Pfam profile: PF01063 aminotransferase class IV" 1 2 13 16 At3g19770 vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein contains Pfam domain PF02204: Vacuolar sorting protein 9 (VPS9) domain 1 2 13 17 At3g19940 "sugar transporter, putative similar to sugar transport protein [Arabidopsis thaliana] GI:16524; contains Pfam profile PF00083: major facilitator superfamily protein" 1 2 13 18 At3g20000 "porin family protein low similarity to haymaker protein [Mus musculus] GI:17834089, mitochondrial outer membrane protein MOM35 [Mus musculus] GI:6650562; contains Pfam profile PF01459: Eukaryotic porin" 1 2 13 19 At3g20140 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 1 2 13 20 At3g20190 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor kinase GB:AAA33715 [Petunia integrifolia]" 1 2 13 21 At3g22910 "calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) identical to SP|Q9LIK7 Potential calcium-transporting ATPase 13, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) {Arabidopsis thaliana}; similar to SP|Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca2+-ATPase, isoform 8) {Arabidopsis thaliana}; contains InterPro Accession IPR006069: Cation transporting ATPase" 1 2 13 22 At3g22960 "pyruvate kinase, putative similar to pyruvate kinase isozyme A, chloroplast precursor [Ricinus communis] SWISS-PROT:Q43117" 1 2 13 23 At3g23120 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5b GB:AAC78595 [Lycopersicon esculentum] (Plant Cell 10, 1915-1926 (1998);" 1 2 13 24 At3g23172 hypothetical protein 1 2 13 25 At3g23310 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 1 2 14 1 At3g23360 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase GB:AAD17805 from [Lotus japonicus]" 1 2 14 2 At3g23570 "dienelactone hydrolase family protein similar to SP|Q9ZT66 Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) {Zea mays}; contains Pfam profile: PF01738 dienelactone hydrolase family" 1 2 14 3 At3g23620 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 1 2 14 4 At3g26450 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 1 2 14 5 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 1 2 14 6 At3g26650 "glyceraldehyde 3-phosphate dehydrogenase A, chloroplast (GAPA) / NADP-dependent glyceraldehydephosphate dehydrogenase subunit A identical to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) {Arabidopsis thaliana}" 1 2 14 7 At3g26680 DNA cross-link repair protein-related contains weak similarity to Swiss-Prot:P30620 DNA cross-LINK repair protein PSO2/SNM1 [Saccharomyces cerevisiae] 1 2 14 8 At3g26820 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 1 2 14 9 At3g26855 hypothetical protein 1 2 14 10 At3g27010 "TCP family transcription factor, putative similar to PCF2 [(GI:2580440) Oryza sativa]" 1 2 14 11 At3g27060 "ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative similar to ribonucleotide reductase R2 [Nicotiana tabacum] GI:1044912; contains Pfam profile PF00268: Ribonucleotide reductase, small chain" 1 2 14 12 At3g30150 hypothetical protein 1 2 14 13 At3g30220 hypothetical protein 1 2 14 14 At3g30440 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 1 2 14 15 At3g30500 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 1 2 14 16 At3g30710 "hypothetical protein similar to Arginine-tRNA-protein transferase 1 (EC 2.3.2.8)(R-transferase 1) (Arginyltransferase 1) (Arginyl-tRNA--protein transferase 1)(SP:Q9Z2A5) {Mus musculus}; similar to MRP homologs in mycobacteria (SP:P53382), which belong to the MR?/NBP35 family of ATP-binding proteins." 1 2 14 17 At3g30755 hypothetical protein 1 2 14 18 At3g31370 hypothetical protein contains similarity to hypothetical proteins 1 2 14 19 At3g31540 hypothetical protein 1 2 14 20 At3g44720 prephenate dehydratase family protein similar to bacterial PheA gene products 1 2 14 21 At3g44760 hypothetical protein 1 2 14 22 At3g44920 "cation/hydrogen exchanger, putative (CHX11) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 14 23 At3g44970 cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; contains Pfam profile: PF00067 cytochrome P450 1 2 14 24 At3g45120 hypothetical protein 1 2 14 25 At3g45180 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 2 15 1 At3g45390 "lectin protein kinase family protein contains Protein kinases ATP-binding region signature, Prosite:PS00107 and Legume lectins beta-chain signature, Prosite:PS00307" 1 2 15 2 At3g45443 expressed protein 1 2 15 3 At3g48260 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 15 4 At3g48320 "cytochrome P450 71A21, putative (CYP71A21) identical to Cytochrome P450 71A21 (SP:Q9STL2) [Arabidopsis thaliana]" 1 2 15 5 At3g48490 expressed protein 1 2 15 6 At3g48550 "expressed protein putative zinc-finger protein - Arabidopsis thaliana,PID:g4406777" 1 2 15 7 At3g48730 "glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) / glutamate-1-semialdehyde aminotransferase 2 (GSA-AT 2) identical to GSA2 [SP|Q42522]" 1 2 15 8 At3g48790 "serine C-palmitoyltransferase, putative similar to serine palmitoyltransferase from Solanum tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus musculus [SP|P97363]" 1 2 15 9 At3g48950 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 1 2 15 10 At3g49010 60S ribosomal protein L13 (RPL13B) / breast basic conserved protein 1-related (BBC1) 1 2 15 11 At3g51860 "cation exchanger, putative (CAX3) similar to high affinity calcium antiporter CAX1 [Arabidopsis thaliana] gi|9256741|gb|AAB05913; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563; non-consensus AT-acceptor splice site at intron 1" 1 2 15 12 At3g51895 sulfate transporter (ST1) identical to sulfate transporter [Arabidopsis thaliana] GI:2285885 1 2 15 13 At3g52050 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 1 2 15 14 At3g52080 "cation/hydrogen exchanger, putative (CHX28) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 2 15 15 At3g52230 expressed protein 1 2 15 16 At3g52270 hypothetical protein 1 2 15 17 At3g52440 "Dof-type zinc finger domain-containing protein DNA binding protein - Hordeum vulgare,PID:e1334094" 1 2 15 18 At3g52500 aspartyl protease family protein contains Pfam PF00026: eukaryotic aspartyl protease 1 2 15 19 At3g55010 "phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) identical to phosphoribosylformylglycinamidine cyclo-ligase, chloroplast precursor SP:Q05728 from [Arabidopsis thaliana]; contains Pfam profiles: PF02769 AIR synthase related protein, C-terminal domain, PF00586 AIR synthase related protein, N-terminal domain" 1 2 15 20 At3g55060 expressed protein contains weak similarity to intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae]; expression supported by MPSS 1 2 15 21 At3g55220 "splicing factor, putative contains CPSF A subunit region (PF03178); contains weak WD-40 repeat (PF00400); similar to Splicing factor 3B subunit 3 (SF3b130)/spliceosomal protein/Splicing factor 3B subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens, EMBL:HSAJ1443_1" 1 2 15 22 At3g55280 60S ribosomal protein L23A (RPL23aB) various ribosomal L23a proteins 1 2 15 23 At3g55460 "SC35-like splicing factor, 30 kD (SCL30) nearly identical to SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana] GI:9843657; Serine/arginine-rich protein/putative splicing factor, Arabidopdis thaliana, EMBL:AF099940; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 1 2 15 24 At3g55530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 2 15 25 At3g55700 "UDP-glucoronosyl/UDP-glucosyl transferase family protein glucuronosyl transferase homolog, Lycopersicon esculentum, PIR:S39507 ;contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase" 1 2 16 1 At3g55740 proline transporter 2 (ProT2) identical to proline transporter 2 GI:1769903 from [Arabidopsis thaliana] 1 2 16 2 At3g58610 "ketol-acid reductoisomerase identical to ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (Swiss-Prot:Q05758) [Arabidopsis thaliana]" 1 2 16 3 At3g58670 expressed protein 1 2 16 4 At3g58840 expressed protein 1 2 16 5 At3g58900 F-box family protein contains F-box domain Pfam:PF00646 1 2 16 6 At3g59070 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 (GI:11357190) [Arabidopsis thaliana]" 1 2 16 7 At3g59110 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 16 8 At3g59290 "epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to Af10-protein - Avena fatua, EMBL:U80041" 1 2 16 9 At3g59330 "anthocyanin-related membrane protein family similar to anthocyanin-related membrane protein 1 (GI:16416383), anthocyanin-related membrane protein 2 (GI:16416385), anthocyanin-related membrane protein 3 (GI:16416387) [Arabidopsis thaliana]" 1 2 16 10 At3g62000 O-methyltransferase family 3 protein several O-methyltransferases - different species; contains Pfam 01596 O-methyltransferase domain 1 2 16 11 At3g62040 haloacid dehalogenase-like hydrolase family protein similarity to SP|P53078 SSM1 protein {Saccharomyces cerevisiae}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 1 2 16 12 At3g62220 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 1 2 16 13 At3g62280 "GDSL-motif lipase/hydrolase family protein similar to Enod8.1 [Medicago truncatula] GI:18390045; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 16 14 At3g62440 F-box family protein contains F-box domain Pfam:PF00646 1 2 16 15 At3g62500 expressed protein hypothetical proteins - Arabidopsis thaliana; expression supported by MPSS 1 2 16 16 At3g62670 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 1 2 16 17 At3g62730 "expressed protein DESSICATION-RELATED PROTEIN PCC13-62 PRECURSOR - Craterostigma plantagineum, PIR:E45509" 1 2 16 18 At4g01600 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain 1 2 16 19 At4g01650 expressed protein 1 2 16 20 At4g01800 "preprotein translocase secA subunit, putative similar to preprotein translocase secA subunit, chloroplast [precursor] SP:Q9SYI0 from [Arabidopsis thaliana]; non-consensus GA donor splice site at exon 4" 1 2 16 21 At4g01860 transducin family protein / WD-40 repeat family protein contains ten G-protein beta-subunit (beta-transducin) WD-40 repeats 1 2 16 22 At4g01980 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 1 2 16 23 At4g02020 zeste-like protein 1 (EZA1) identical to enhancer of zeste-like protein 1(EZA1) (GI:4185507) [Arabidopsis thaliana]; similar to polycomb group [Arabidopsis thaliana] GI:1903019 (curly leaf); contains Pfam profile PF00856: SET domain 1 2 16 24 At4g02180 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 2 16 25 At4g02210 expressed protein 1 2 17 1 At4g05150 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein various predicted proteins contains Pfam profile PF00564: PB1 domain 1 2 17 2 At4g05210 bacterial transferase hexapeptide repeat-containing protein similar to SP|P32203 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) {Yersinia enterocolitica}; contains Pfam profile PF00132: Bacterial transferase hexapeptide (three repeats) 1 2 17 3 At4g05380 "AAA-type ATPase family protein contains similarity to mitochondrial ATPase (AAA family) Bcs1p, Saccharomyces cerevisiae, Swiss Prot:P32839" 1 2 17 4 At4g05440 temperature sensing protein-related contains weak similarity to D123 (GI:1236114) [Rattus norvegicus] 1 2 17 5 At4g05630 expressed protein 1 2 17 6 At4g06479 hypothetical protein 1 2 17 7 At4g07340 replication protein-related contains similarity to Xenopus laevis replication protein A1 (SW:RFA1_XENLA); contains non-consensus (GC) donor splice site at intron 3 1 2 17 8 At4g07430 "hypothetical protein similar to At2g10840, At5g35280, At2g10500, At2g05860, At4g07310, At1g39270" 1 2 17 9 At4g10570 ubiquitin carboxyl-terminal hydrolase family protein similar to ubiquitin-specific protease UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase 1 2 17 10 At4g10620 expressed protein 1 2 17 11 At4g10800 "expressed protein predicted proteins, Arabidopsis thaliana" 1 2 17 12 At4g10845 hypothetical protein 1 2 17 13 At4g10970 expressed protein 1 2 17 14 At4g11040 "protein phosphatase 2C, putative / PP2C, putative phosphoprotein phosphatase (EC 3.1.3.16) 2C - Arabidopsis thaliana, PIR2:S55457" 1 2 17 15 At4g11190 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein [Forsythia x intermedia] gi|6694693|gb|AAF25357; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 2 17 16 At4g11240 serine/threonine protein phosphatase PP1 isozyme 6 (PP1BG) (TOPP6) identical to SP|P48486 Serine/threonine protein phosphatase PP1 isozyme 6 (EC 3.1.3.16) {Arabidopsis thaliana} 1 2 17 17 At4g13980 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 1 2 17 18 At4g14030 "selenium-binding protein, putative contains Pfam profile PF05694: 56kDa selenium binding protein (SBP56); identical to Putative selenium-binding protein (Swiss-Prot:O23264) [Arabidopsis thaliana]; similar to selenium binding protein (GI:15485232) [Arabidopsis thaliana]; identical to cDNA from partial mRNA for selenium binding protein (sbp gene) GI:15485231" 1 2 17 19 At4g14160 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 1 2 17 20 At4g14210 "phytoene dehydrogenase, chloroplast / phytoene desaturase (PDS) identical to SP|Q07356 Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase){Arabidopsis thaliana}; high similarity to phytoene desaturase [Lycopersicon esculentum][GI:19287]" 1 2 17 21 At4g14340 casein kinase I (CKI1) identical to casein kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395 1 2 17 22 At4g14380 expressed protein 1 2 17 23 At4g14510 "expressed protein contains Pfam domain, PF04581: Protein of unknown function (DUF578)" 1 2 17 24 At4g14550 auxin-responsive AUX/IAA family protein identical to IAA14 (GI:972931) [Arabidopsis thaliana]; similar to SP|Q38825 Auxin-responsive protein IAA7 (Indoleacetic acid-induced protein 7) {Arabidopsis thaliana} 1 2 17 25 At4g16930 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 1 2 18 1 At4g16970 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 2 18 2 At4g17130 hypothetical protein 1 2 18 3 At4g17190 farnesyl pyrophosphate synthetase 2 (FPS2) / FPP synthetase 2 / farnesyl diphosphate synthase 2 identical to SP|Q43315 Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis thaliana} 1 2 18 4 At4g17350 expressed protein 1 2 18 5 At4g17420 "expressed protein contains Pfam domain, PF01987: Protein of unknown function" 1 2 18 6 At4g17570 zinc finger (GATA type) family protein 1 2 18 7 At4g17615 calcineurin B-like protein 1 (CBL1) identical to calcineurin B-like protein 1 (GI:3309082) [Arabidopsis thaliana] 1 2 18 8 At4g20200 "terpene synthase/cyclase family protein 5-epi-aristolochene synthase, Nicotiana tabacum, PATX:G505588" 1 2 18 9 At4g20260 DREPP plasma membrane polypeptide family protein contains Pfam profile: PF05558 DREPP plasma membrane polypeptide 1 2 18 10 At4g20420 tapetum-specific protein-related similar to SaTAP 35 [Sinapis alba] GI:408108 1 2 18 11 At4g20460 "NAD-dependent epimerase/dehydratase family protein similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba GI:3021357 [EMBL:AJ005082], Bacillus subtilis SP|P55180; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 1 2 18 12 At4g20770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 18 13 At4g20830 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 2 18 14 At4g21010 "transcription initiation factor-related contains weak similarity to Transcription initiation factor IIE, beta subunit (TFIIE-beta) (Swiss-Prot:P29084) [Homo sapiens]" 1 2 18 15 At4g21070 "BRCT domain-containing protein / zinc finger (C3HC4-type RING finger) family protein (BRCA1) contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT) domain, PF00097: Zinc finger, C3HC4 type (RING finger), PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473" 1 2 18 16 At4g23640 "potassium transporter / tiny root hair 1 protein (TRH1) identical to tiny root hair 1 protein [Arabidopsis thaliana] gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family member, PMID:11500563; identical to cDNA mRNA for tiny root hair 1 protein (trh1) GI:11181957" 1 2 18 17 At4g23690 disease resistance-responsive family protein / dirigent family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669; similar to dirigent protein [Forsythia x intermedia] gi|6694693|gb|AAF25357 1 2 18 18 At4g23870 "expressed protein predicted proteins, Arabidopsis thaliana" 1 2 18 19 At4g23900 nucleoside diphosphate kinase 4 (NDK4) contains Pfam PF00334 : Nucleoside diphosphate kinase domain; identical to nucleoside diphosphate kinase 4 (GI:11990430) [Arabidopsis thaliana] 1 2 18 20 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 1 2 18 21 At4g24110 expressed protein 1 2 18 22 At4g24265 expressed protein 1 2 18 23 At4g24290 expressed protein 1 2 18 24 At4g26870 "aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative simialr to aspartate-tRNA ligase (EC 6.1.1.12) from Drosophila melanogaster GI:4512034, Homo sapiens SP|P14868, Rattus norvegicus SP|P15178; contains Pfam profile PF00152 tRNA synthetases class II (D, K and N)" 1 2 18 25 At4g26920 hypothetical protein 1 2 19 1 At4g27070 "tryptophan synthase, beta subunit 2 (TSB2) identical to SP|25269" 1 2 19 2 At4g27120 expressed protein 1 2 19 3 At4g27310 "zinc finger (B-box type) family protein zinc-finger protein S3574, Oryza sativa, PIR3:JE0113" 1 2 19 4 At4g27370 "myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF00612 IQ calmodulin-binding motif" 1 2 19 5 At4g27530 expressed protein 1 2 19 6 At4g27585 band 7 family protein similar to stomatin-like protein [Zea mays] GI:7716464; contains Pfam profile PF01145: SPFH domain / Band 7 family 1 2 19 7 At4g30160 "villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain" 1 2 19 8 At4g30210 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-cytochrome P450 oxydoreductase from [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183564, GI:13183566" 1 2 19 9 At4g30360 "cyclic nucleotide-regulated ion channel, putative (CNGC17) similar to cyclic nucleotide and calmodulin-regulated ion channel cngc5 GI:4581205 from [Arabidopsis thaliana]" 1 2 19 10 At4g30410 expressed protein similar to cDNA bHLH transcription factor (bHLH eta gene) gi:32563007 1 2 19 11 At4g30550 "glutamine amidotransferase class-I domain-containing protein similar to defense-related protein [Brassica carinata] GI:14009290, component of aniline dioxygenase (GMP synthase like protein) - Acinetobacter sp.,PID:d1013698; contains Pfam profile PF00117: glutamine amidotransferase class-I" 1 2 19 12 At4g30610 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 1 2 19 13 At4g30760 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 1 2 19 14 At4g30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related contains similarity to CDK-activating kinase assembly factor MAT1 (RING finger protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (Swiss-Prot:P51950) [Marthasterias glacialis] 1 2 19 15 At4g33310 expressed protein 1 2 19 16 At4g33370 "DEAD-box protein abstrakt, putative RNA helicase DBP2 - Saccharomyces cerevisiae, PID:g5272" 1 2 19 17 At4g33520 "metal-transporting P-type ATPase, putative (PAA1) nearly identical to gi:2668492; contains Pfam heavy-metal-associated domain PF00403" 1 2 19 18 At4g33580 carbonic anhydrase family protein / carbonate dehydratase family protein similar to SP|P46512 Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase 1) {Flaveria linearis}; contains Pfam profile PF00484: Carbonic anhydrase 1 2 19 19 At4g33730 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 1 2 19 20 At4g33790 "acyl CoA reductase, putative similar to acyl CoA reductase [Simmondsia chinensis] GI:5020215; contains Pfam profile PF03015: Male sterility protein; No start codon identified, may contain anomalous splicing at 5' end." 1 2 19 21 At4g33930 "glycine-rich protein hyphally regulated protein, Candida albicans, PIR2:S58135" 1 2 19 22 At4g33980 expressed protein 1 2 19 23 AT5G57480 PC-1 B12 1 2 19 24 3XSSC PC-1 B24 1 2 19 25 AT1G29930 PC-1 F12 1 2 20 1 3XSSC PC-1 F24 1 2 20 2 AT3G44150 PC-1 J12 1 2 20 3 3XSSC PC-1 J24 1 2 20 4 AT4G00810 PC-1 N12 1 2 20 5 3XSSC PC-1 N24 1 2 20 6 At4g36540 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 1 2 20 7 At4g36580 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 1 2 20 8 At4g36730 G-box binding factor 1 (GBF1) identical to G-box binding factor 1 SP:P42774 from [Arabidopsis thaliana]; contains Pfam profile: PF00170 bZIP transcription factor 1 2 20 9 At4g36760 aminopeptidase P similar to Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 1 2 20 10 At4g36925 expressed protein 1 2 20 11 At4g36990 heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) identical to heat shock transcription factor 4 (HSF4) SP:Q96320 from [Arabidopsis thaliana] 1 2 20 12 At4g37170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 20 13 At4g37220 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 1 2 20 14 At4g39810 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 1 2 20 15 At4g39860 expressed protein 1 2 20 16 At4g40020 hypothetical protein 1 2 20 17 At4g40060 homeobox-leucine zipper protein 16 (HB-16) / HD-ZIP transcription factor 16 identical to homeodomain leucine-zipper protein ATHB-16 (GP:5668909|) {Arabidopsis thaliana} 1 2 20 18 At5g01100 expressed protein similar to axi 1 [Nicotiana tabacum] GI:559921; contains Pfam profile PF03138: Plant protein family 1 2 20 19 At5g01160 e-cadherin binding protein-related contains weak similarity to E-cadherin binding protein E7 [Mus musculus GP|9622093|gb|AAF89617 1 2 20 20 At5g01290 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF03919: mRNA capping enzyme C-terminal domain" 1 2 20 21 At5g01350 expressed protein 1 2 20 22 At5g04050 maturase-related contains similarity to maturase proteins from several species 1 2 20 23 At5g04120 phosphoglycerate/bisphosphoglycerate mutase family protein low similarity to SP|P36623 Phosphoglycerate mutase (EC 5.4.2.1) {Schizosaccharomyces pombe}; contains Pfam profile PF00300: phosphoglycerate mutase family 1 2 20 24 At5g04280 glycine-rich RNA-binding protein 1 2 20 25 At5g04350 self-incompatibility protein-related similar to self-incompatibility [Papaver nudicaule] GI:3097262 1 2 21 1 At5g04520 expressed protein ; expression supported by MPSS 1 2 21 2 At5g04600 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 2 21 3 At5g04770 amino acid permease family protein similar to cationic amino acid transporter-1 [Rattus norvegicus] GI:1589917; contains Pfam profile PF00324: Amino acid permease 1 2 21 4 At5g04810 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 1 2 21 5 At5g07350 tudor domain-containing protein / nuclease family protein contains Pfam domains PF00567: Tudor domain and PF00565: Staphylococcal nuclease homologue 1 2 21 6 At5g07400 forkhead-associated domain-containing protein / FHA domain-containing protein 1 2 21 7 At5g07570 glycine/proline-rich protein contains similarity to flagelliform silk protein [Nephila clavipes] gi|7106224|gb|AAF36090 1 2 21 8 At5g07630 nuclear division RFT family protein low similarity to SP|P38206 Nuclear division RFT1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04506: Rft protein 1 2 21 9 At5g07820 expressed protein 1 2 21 10 At5g07880 "SNAP25 homologous protein, putative / synaptosomal-associated protein SNAP25-like, putative (SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25 homologous protein SNAP29 (AtSNAP29)(Synaptosomal-associated protein SNAP25-like 2) [Arabidopsis thaliana]; contains Pfam profile: PF05739 SNARE domain" 1 2 21 11 At5g08060 "expressed protein sigma factor F inhibitor spoIIAB, Bacillus megaterium, PIR:B48402" 1 2 21 12 At5g08110 "DEAD/DEAH box helicase, putative several putative ATP-dependent helicases" 1 2 21 13 At5g11140 hypothetical protein 1 2 21 14 At5g11180 "glutamate receptor family protein (GLR2.6) plant glutamate receptor family, PMID:11379626" 1 2 21 15 At5g11350 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 2 21 16 At5g11410 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 1 2 21 17 At5g11590 "AP2 domain-containing transcription factor, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana]" 1 2 21 18 At5g11630 expressed protein 1 2 21 19 At5g11810 expressed protein 1 2 21 20 At5g11870 expressed protein 1 2 21 21 At5g15010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 21 22 At5g15070 expressed protein 1 2 21 23 At5g15230 gibberellin-regulated protein 4 (GASA4) / gibberellin-responsive protein 4 identical to SP|P46690 Gibberellin-regulated protein 4 precursor {Arabidopsis thaliana} 1 2 21 24 At5g15280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 21 25 At5g15460 expressed protein 1 2 22 1 At5g15510 expressed protein 1 2 22 2 At5g15660 F-box family protein contains Pfam PF00646: F-box domain 1 2 22 3 At5g15720 GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386) and EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 1 2 22 4 At5g18360 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 2 22 5 At5g18410 expressed protein similar to p53 inducible protein [Homo sapiens] GI:5616320 1 2 22 6 At5g18550 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 1 2 22 7 At5g18610 "protein kinase family protein contains eukaryotic protein kinase domain, PROSITE:PS00107" 1 2 22 8 At5g18740 expressed protein predicted proteins - Arabidopsis thaliana; expression supported by MPSS 1 2 22 9 At5g18800 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein contains Pfam profile: PF05850 NADH-ubiquinone oxidoreductase 19 kDa subunit 1 2 22 10 At5g18940 Mo25 family protein similar to SP|Q06138 MO25 protein {Mus musculus}; contains Pfam profile PF03204: Mo25 protein family 1 2 22 11 At5g18990 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 2 22 12 At5g22320 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560" 1 2 22 13 At5g22370 "ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein" 1 2 22 14 At5g22545 expressed protein 1 2 22 15 At5g22580 expressed protein 1 2 22 16 At5g22740 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 1 2 22 17 At5g22790 expressed protein 1 2 22 18 At5g22950 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 2 22 19 At5g23010 2-isopropylmalate synthase 3 (IMS3) identical to 2-isopropylmalate synthase (IMS3) [Arabidopsis thaliana] GI:15983745; identical to cDNA 2-isopropylmalate synthase (IMS3) GI:15983744 1 2 22 20 At5g25590 expressed protein contains Pfam profile PF04783: Protein of unknown function (DUF630) 1 2 22 21 At5g25750 hypothetical protein 1 2 22 22 At5g25890 auxin-responsive protein / indoleacetic acid-induced protein 28 (IAA28) identical to SP|Q9XFM0|AXIS_ARATH Auxin-responsive protein IAA28 (Indoleacetic acid-induced protein 28) {Arabidopsis thaliana} 1 2 22 23 At5g25950 "hypothetical protein various predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 1 2 22 24 At5g26100 hypothetical protein 1 2 22 25 At5g26160 expressed protein 1 2 23 1 At5g26320 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 2 23 2 At5g26594 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 1 2 23 3 At5g32600 hypothetical protein 1 2 23 4 At5g32775 hypothetical protein 1 2 23 5 At5g33390 glycine-rich protein similar to nuclear antigen EBNA-1 (GI:3342234) {Cercopithecine herpesvirus 15} 1 2 23 6 At5g34358 hypothetical protein 1 2 23 7 At5g34895 "hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At3g30450, At4g03990, At3g47270, At2g02200" 1 2 23 8 At5g34940 "glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase precursor [Scutellaria baicalensis] GI:8918740; contains Pfam profile PF03662: Glycosyl hydrolase family 79, N-terminal domain" 1 2 23 9 At5g35190 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 23 10 At5g35230 hypothetical protein 1 2 23 11 At5g38386 F-box family protein contains F-box domain Pfam:PF00646 1 2 23 12 At5g38430 "ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) identical to SP|P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) {Arabidopsis thaliana}" 1 2 23 13 At5g38595 hypothetical protein 1 2 23 14 At5g38650 proteasome maturation factor UMP1 family protein contains Pfam profile PF05348: Proteasome maturation factor UMP1 1 2 23 15 At5g38830 tRNA synthetase class I (C) family protein similar to SP|Q06752 Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase) (CysRS) {Bacillus subtilis}; contains Pfam profile PF01406: tRNA synthetases class I (C) 1 2 23 16 At5g38895 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 2 23 17 At5g39050 "transferase family protein similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora GI:4185599, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens GI:17980232, Salvia splendens GI:17980234; contains Pfam profile PF02458 transferase family" 1 2 23 18 At5g39130 "germin-like protein, putative identical to germin-like protein subfamily 1 member 16 (SP|Q9FIC8)" 1 2 23 19 At5g41970 expressed protein contains Pfam profile PF03690: Uncharacterised protein family (UPF0160) 1 2 23 20 At5g42020 luminal binding protein 2 (BiP-2) (BP2) similar to SWISS-PROT: Q39043; GI:1303695; luminal binding protein (BiP) [Arabidopsis thaliana] 1 2 23 21 At5g42170 "family II extracellular lipase, putative similar to family II lipase EXL3 [Arabidopsis thaliana] GI:15054386; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 1 2 23 22 At5g42230 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)] 1 2 23 23 At5g42390 metalloendopeptidase identical to chloroplast processing enzyme metalloendopeptidase [Arabidopsis thaliana] gi|2827039|gb|AAC39482 1 2 23 24 At5g42450 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 2 23 25 At5g42635 glycine-rich protein 1 2 24 1 At5g42680 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 2 24 2 At5g45250 "disease resistance protein (TIR-NBS-LRR class), putative (RPS4) domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Identical to RPS4 (GI:11357255). False intron created at intron 2 to escape a frameshift in the BAC sequence." 1 2 24 3 At5g45280 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 1 2 24 4 At5g45420 myb family transcription factor contains Pfam profile: PF00249 Myb DNA binding domain 1 2 24 5 At5g45480 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 1 2 24 6 At5g45620 "26S proteasome regulatory subunit, putative (RPN9) contains similarity to 26S proteasome subunit p40.5 GI:3618343 from [Homo sapiens]" 1 2 24 7 At5g45680 "FK506-binding protein 1 (FKBP13) identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplast precursor (Ppiase) (Rotamase) (SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744) [Arabidopsis thaliana]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 1 2 24 8 At5g45820 CBL-interacting protein kinase 20 (CIPK20) identical to CBL-interacting protein kinase 20 [Arabidopsis thaliana] gi|14486384|gb|AAK61493 1 2 24 9 At5g45880 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 1 2 24 10 At5g48470 expressed protein 1 2 24 11 At5g48520 expressed protein similar to unknown protein (gb|AAB97010.1) 1 2 24 12 At5g48657 defense protein-related weak similarity to SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis thaliana} 1 2 24 13 At5g48690 hypothetical protein 1 2 24 14 At5g48870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm5 [Homo sapiens] SWISS-PROT:Q9Y4Y9" 1 2 24 15 At5g48930 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus [GI:3288180, GI:2239091]; contains Pfam profile PF02458 transferase family" 1 2 24 16 At5g49080 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 2 24 17 At5g49140 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 2 24 18 At5g51860 MADS-box protein (AGL72) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); 1 2 24 19 At5g51900 cytochrome P450 family similar to cytochrome P450 86A1 (SP:P48422) [Arabidopsis thaliana] 1 2 24 20 At5g52065 hypothetical protein 1 2 24 21 At5g52120 F-box family protein / SKP1 interacting partner 3-related contains Pfam profile PF00646: F-box domain 1 2 24 22 At5g52290 hypothetical protein 1 2 24 23 At5g52350 exocyst subunit EXO70 family protein strong similarity to unknown protein (emb|CAB83315.1); contains Pfam domain PF03081: Exo70 exocyst complex subunit; 1 2 24 24 At5g52530 dentin sialophosphoprotein-related contains weak similarity to dentin sialophosphoprotein precursor (Dentin matrix protein-3) (DMP- 3) (Swiss-Prot:P97399) [Mus musculus] 1 2 24 25 At5g52570 "beta-carotene hydroxylase, putative similar to GI:1575296, beta-carotene hydroxylase" 1 2 25 1 At5g55230 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 2 25 2 At5g55290 ATP synthase subunit H family protein contains weak similarity to Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) (Swiss-Prot:P81103) [Bos taurus]; contains Pfam profile PF05493: ATP synthase subunit H 1 2 25 3 At5g55470 "sodium proton exchanger / Na+/H+ exchanger 4 (NHX4) identical to Na+/H+ exchanger 4 [Arabidopsis thaliana] GI:19919844; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 1 2 25 4 At5g55520 expressed protein weak similarity to phragmoplast-associated kinesin-related protein 1 [Arabidopsis thaliana] GI:8745333; expression supported by MPSS 1 2 25 5 At5g55660 expressed protein similar to unknown protein (pir||T08929) 1 2 25 6 At5g55720 pectate lyase family protein similar to pectate lyase 1 GP:6606532 from [Musa acuminata] 1 2 25 7 At5g55893 hypothetical protein 1 2 25 8 At5g55950 "transporter-related low similarity to UDP-sugar transporter [Drosophila melanogaster] GI:14971008, UDP-glucuronic acid transporter [Homo sapiens] GI:11463949" 1 2 25 9 At5g58550 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 1 2 25 10 At5g58600 "expressed protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 1 2 25 11 At5g58760 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); damage-specific DNA binding protein 2 (GI:10798819) [Homo sapiens] 1 2 25 12 At5g58790 expressed protein ; expression supported by MPSS 1 2 25 13 At5g58970 uncoupling protein (UCP2) identical to uncoupling protein GI:4063007 from [Arabidopsis thaliana] 1 2 25 14 At5g59020 expressed protein 1 2 25 15 At5g59160 serine/threonine protein phosphatase PP1 isozyme 2 (TOPP2) identical to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana} 1 2 25 16 At5g59210 "myosin heavy chain-related contains weak similarity to Myosin heavy chain, gizzard smooth muscle (Swiss-Prot:P10587) [Gallus gallus]" 1 2 25 17 At5g61820 "expressed protein MtN19, Medicago truncatula, EMBL:MTY15367" 1 2 25 18 At5g61890 "AP2 domain-containing transcription factor family protein similar to RAP2.6 (GP:17065542) {Arabidopsis thaliana}; AP2 domain containing protein, Arabidopsis thaliana, EMBL:ATAF3099" 1 2 25 19 At5g62070 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 2 25 20 At5g62120 hypothetical protein 1 2 25 21 At5g62280 expressed protein 1 2 25 22 At5g62340 invertase/pectin methylesterase inhibitor family protein similar to SP|Q42534 Pectinesterase 2 precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2) {Arabidopsis thaliana}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 1 2 25 23 At5g62500 "microtubule-associated EB1 family protein similar to EBF3-S (Microtubule-associated protein) [Homo sapiens] GI:12751131; contains Pfam profiles PF00307: Calponin homology (CH) domain, PF03271: EB1 protein" 1 2 25 24 At5g62560 "armadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain" 1 2 25 25 At5g65100 ethylene insensitive 3 family protein contains Pfam profile: PF04873 ethylene insensitive 3 1 2 26 1 At5g65165 "succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-3) nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-3) [gi:12049602] from Arabidopsis thaliana" 1 2 26 2 At5g65300 expressed protein 1 2 26 3 At5g65360 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 1 2 26 4 At5g65510 "ovule development protein, putative similar to AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana]" 1 2 26 5 At5g65570 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 2 26 6 At5g65720 "cysteine desulfurase, mitochondrial (NIFS) identical to Cysteine desulfurase, mitochondrial precursor (SP:O49543) {Arabidopsis thaliana}; identical to cDNA GI:12656131; contains Pfam profile PF00266: aminotransferase, class V" 1 2 26 7 At5g65780 "branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) nearly identical to SP|Q9FYA6 Branched-chain amino acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 1 2 26 8 ath-MIR169g miRNA gene Arabidopsis thaliana miR169g stem-loop 1 2 26 9 ath-MIR156e miRNA gene Arabidopsis thaliana miR156e stem-loop 1 2 26 10 ath-MIR169n miRNA gene Arabidopsis thaliana miR169n stem-loop 1 2 26 11 ath-MIR395e miRNA gene Arabidopsis thaliana miR395e stem-loop 1 2 26 12 3xSSC 3xSSC 1 2 26 13 3xSSC 3xSSC 1 2 26 14 3xSSC 3xSSC 1 2 26 15 3xSSC 3xSSC 1 2 26 16 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 1 2 26 17 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 26 18 Alien5 Control: Stratagene Spotreport Alien Oligo 1 2 26 19 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 1 2 26 20 atc07 Randomly generated negative control 1 2 26 21 Alien1 Control: Stratagene Spotreport Alien Oligo 1 2 26 22 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 2 26 23 atc03 Randomly generated negative control 1 2 26 24 Blank Blank 1 2 26 25 Blank Blank 1 3 1 1 atc05 Randomly generated negative control 1 3 1 2 atc11 Randomly generated negative control 1 3 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 1 3 1 4 atc01 Randomly generated negative control 1 3 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 1 3 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 3 1 7 atc09 Randomly generated negative control 1 3 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 1 3 1 9 At1g02050 "chalcone and stilbene synthase family protein Similar to rice chalcone synthase homolog, gp|U90341|2507617 and anther specific protein, gp|Y14507|2326772" 1 3 1 10 At1g02080 "transcriptional regulator-related contains Pfam PF04054: CCR4-Not complex component, Not1; contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to General negative regulator of transcription subunit 1 (SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs gb|T44328 and gb|AA395265" 1 3 1 11 At1g02190 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]" 1 3 1 12 At1g02250 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC1 (GI:21554126) (Arabidopsis thaliana) 1 3 1 13 At1g02410 "cytochrome c oxidase assembly protein CtaG / Cox11 family similar to cytochrome c oxidase assembly protein cox11 GI:1244782 from [Saccharomyces cerevisiae]; similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor (SP:Q9Y6N1){Homo sapiens}; contains Pfam PF04442: Cytochrome c oxidase assembly protein CtaG / Cox11" 1 3 1 14 At1g02470 expressed protein contains non-consensus splice sites; 1 3 1 15 At1g02660 lipase class 3 family protein contains Pfam profile PF01764: Lipase 1 3 1 16 At1g02700 expressed protein similar to hypothetical protein GB:CAB80707 GI:7268598 from [Arabidopsis thaliana] 1 3 1 17 At1g05300 "metal transporter, putative (ZIP5) identical to putative metal transporter ZIP5 [Arabidopsis thaliana] gi|17385784|gb|AAL38432; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 1 3 1 18 At1g05360 expressed protein Similar to Arabidopsis hypothetical protein PID:e326839 (gb|Z97337) contains transmembrane domains 1 3 1 19 At1g05520 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 1 3 1 20 At1g05575 expressed protein 1 3 1 21 At1g05710 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413; identical to bHLH transcription factor (bHLH-alpha gene)" 1 3 1 22 At1g05770 "jacalin lectin family protein similar to gi:6503088 (GB:AAF14583) from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494 (2000)); contains Pfam profile PF01419 jacalin-like lectin domain" 1 3 1 23 At1g05900 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 1 3 1 24 At1g05940 amino acid permease family protein low similarity to SP|P30823 High-affinity cationic amino acid transporter-1 (CAT-1) {Rattus norvegicus}; contains Pfam profile PF00324: Amino acid permease 1 3 1 25 At1g08450 calreticulin 3 (CRT3) identical to similar to SP|O04153 Calreticulin 3 precursor {Arabidopsis thaliana} 1 3 2 1 At1g08510 acyl-[acyl carrier protein] thioesterase / acyl-ACP thioesterase / oleoyl-[acyl-carrier protein] hydrolase / S-acyl fatty acid synthase thioesterase identical to acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana] GI:804948 1 3 2 2 At1g08670 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain;similar to epsin 2b (GI:3894397) [Homo sapiens] 1 3 2 3 At1g08720 "mitogen-activated protein kinase kinase kinase (MAPKKK) (EDR1) identical to EDR1, a MAP kinase kinase kinase [Arabidopsis thaliana] gi|11127925|gb|AAG31143" 1 3 2 4 At1g08845 expressed protein 1 3 2 5 At1g08920 "sugar transporter, putative similar to ERD6 protein {Arabidopsis thaliana} GI:3123712, sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 1 3 2 6 At1g09080 luminal binding protein 3 (BiP-3) (BP3) Similar to Arabidopsis luminal binding protein (gb|D89342); contains Pfam domain PF00012: dnaK protein 1 3 2 7 At1g09155 SKP1 interacting partner 3-related low similarity to SKP1 interacting partner 3 [Arabidopsis thaliana] GI:10716951 1 3 2 8 At1g11720 "starch synthase, putative strong similarity to soluble-starch-synthase [Solanum tuberosum] GI:1911166" 1 3 2 9 At1g11770 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 3 2 10 At1g11910 "aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 1 3 2 11 At1g11930 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 1 3 2 12 At1g12090 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 14 kDa polypeptide [Catharanthus roseus] GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 3 2 13 At1g12150 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS 1 3 2 14 At1g12330 expressed protein 1 3 2 15 At1g12370 type II CPD photolyase PHR1 (PHR1) nearly identical to type II CPD photolyase PHR1 [Arabidopsis thaliana] GI:2984707; similar to class II DNA photolyase (GI:5081541) [Chlamydomonas reinhardtii]; supporting cDNA gi|2984706|gb|AF053365.1|AF053365 1 3 2 16 At1g15140 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene 1 3 2 17 At1g15170 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 1 3 2 18 At1g15310 signal recognition particle 54 kDa protein 1 / SRP54 (SRP-54) (SRP-54A) identical to Swiss-Prot:P37106 signal recognition particle 54 kDa protein 1 (SRP54) [Arabidopsis thaliana] 1 3 2 19 At1g15350 expressed protein 1 3 2 20 At1g15480 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile PF01535: PPR repeat" 1 3 2 21 At1g15540 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 3 2 22 At1g15740 leucine-rich repeat family protein 1 3 2 23 At1g15790 expressed protein 1 3 2 24 At1g18560 "hAT dimerisation domain-containing protein / BED zinc finger domain-containing protein / transposase-related weak similarity to Tam3-transposase [Antirrhinum majus] GI:16064; contains Pfam profiles PF02892: BED zinc finger, PF05699: hAT family dimerisation domain" 1 3 2 25 At1g18620 expressed protein 1 3 3 1 At1g18790 RWP-RK domain-containing protein contains Pfam profile: PF02042 RWP-RK domain 1 3 3 2 At1g18860 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 3 3 3 At1g19010 expressed protein 1 3 3 4 At1g19060 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 1 3 3 5 At1g19210 "AP2 domain-containing transcription factor, putative similar to AP2 domain transcription factor GI:4567204 from [Arabidopsis thaliana]" 1 3 3 6 At1g19270 "ubiquitin interaction motif-containing protein / LIM domain-containing protein weak similarity to LIM-homeobox protein [Mus musculus] GI:2149584, Hic-5 [Mus musculus] GI:664955; contains Pfam profiles PF02809: Ubiquitin interaction motif, PF00412: LIM domain" 1 3 3 7 At1g22170 phosphoglycerate/bisphosphoglycerate mutase family protein similar to SP|P31217 Phosphoglycerate mutase 1 (EC 5.4.2.1) {Escherichia coli O157:H7}; contains Pfam profile PF00300: phosphoglycerate mutase family 1 3 3 8 At1g22230 expressed protein ; expression supported by MPSS 1 3 3 9 At1g22335 expressed protein ; expression supported by MPSS 1 3 3 10 At1g22400 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 3 11 At1g22590 MADS-box family protein similar to putative DNA-binding protein GI:6714399 from [Arabidopsis thaliana]; MADS-box protein AGL87 1 3 3 12 At1g22640 myb family transcription factor (MYB4) similar to myb-related protein GI:1020155 from [Arabidopsis thaliana] 1 3 3 13 At1g22790 expressed protein identical to hypothetical protein GB:CAA72910 1 3 3 14 At1g22860 TGF beta receptor associated protein-related contains weak similarity to TGF beta receptor associated protein-1 [Homo sapiens] gi|3150052|gb|AAC16903 1 3 3 15 At1g26400 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 1 3 3 16 At1g26460 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 3 17 At1g26650 expressed protein 1 3 3 18 At1g26680 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 1 3 3 19 At1g26820 ribonuclease 3 (RNS3) identical to ribonuclease SP:P42815 Ribonuclease 3 precursor (EC 3.1.27.1) {Arabidopsis thaliana} 1 3 3 20 At1g26880 "60S ribosomal protein L34 (RPL34A) identical to GB:Q42351, location of EST 105E2T7, gb|T22624" 1 3 3 21 At1g27080 proton-dependent oligopeptide transport (POT) family protein similar to nitrate transporter NRT1-5 [Glycine max] GI:11933414; contains Pfam profile PF00854: POT family 1 3 3 22 At1g27140 "glutathione S-transferase, putative similar to glutathione S-transferase GB: AAF22517 GI:6652870 from [Papaver somniferum] GB:AY050343." 1 3 3 23 At1g29980 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 1 3 3 24 At1g30050 hypothetical protein 1 3 3 25 At1g30220 sugar transporter family protein similar to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit) [Homo sapiens]; contains Pfam profile PF00083: major facilitator superfamily protein 1 3 4 1 At1g30280 expressed protein contains low similarity to cyclin G-associated kinase GI:1902912 SP|P97874 from [Rattus norvegicus] 1 3 4 2 At1g30490 homeobox-leucine zipper transcription factor (HB-9) identical to HD-Zip protein GB:CAA71854 GI:2145358 from [Arabidopsis thaliana] 1 3 4 3 At1g30515 expressed protein 1 3 4 4 At1g30690 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24280) [Saccharomyces cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700 come from this gene" 1 3 4 5 At1g30750 expressed protein 1 3 4 6 At1g33780 "expressed protein similar to At3g29240 [Arabidopsis thaliana]; contains Pfam profile PF02622: Uncharacterized ACR, COG1678" 1 3 4 7 At1g33830 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 (Arabidopsis thaliana); contains Pfam profile: PF00735 cell division protein (members of this family bind GTP) 1 3 4 8 At1g34000 light stress-responsive one-helix protein (OHP2) contains similarity to photosystem II 22 kDa protein GI:6006279 from [Arabidopsis thaliana] 1 3 4 9 At1g34050 "ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023" 1 3 4 10 At1g34245 expressed protein 1 3 4 11 At1g34310 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profile: PF02309 AUX/IAA family 1 3 4 12 At1g34480 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 1 3 4 13 At1g34550 expressed protein contains Pfam profile PF04765: Protein of unknown function (DUF616); expression supported by MPSS 1 3 4 14 At1g44780 expressed protein ; expression supported by MPSS 1 3 4 15 At1g44835 YbaK/prolyl-tRNA synthetase family protein contains Pfam PF04073: YbaK / prolyl-tRNA synthetases associated domain; similar to 25.7 kDa protein (GI:7271117) [Cicer arietinum] 1 3 4 16 At1g45050 ubiquitin-conjugating enzyme 15 (UBC15) E2; identical to ubiquitin-conjugating enzyme 15 GI:2801442 from [Arabidopsis thaliana] 1 3 4 17 At1g45145 thioredoxin H-type 5 (TRX-H-5) (TOUL) identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5) {Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA for thioredoxin GI:992965 1 3 4 18 At1g45474 "chlorophyll A-B binding protein, putative (LHCA5) identical to Lhca5 protein [Arabidopsis thaliana] GI:4741942; contains Pfam profile: PF00504 chlorophyll A-B binding protein; similar to light-harvesting complex protein GI:22752 from [Pinus sylvestris]" 1 3 4 19 At1g45976 expressed protein 1 3 4 20 At1g47240 "NRAMP metal ion transporter 2, putative (NRAMP2) similar to metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 1 3 4 21 At1g47290 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 1 3 4 22 At1g50240 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 4 23 At1g50300 "zinc finger (Ran-binding) family protein / RNA recognition motif (RRM)-containing protein similar to SP|Q27294 RNA-binding protein cabeza {Drosophila melanogaster}; contains Pfam profiles: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain), PF00641: Zn-finger in Ran binding protein and others" 1 3 4 24 At1g50490 ubiquitin-conjugating enzyme 20 (UBC20) nearly identical to ubiquitin-conjugating enzyme UBC20 [Arabidopsis thaliana] GI:22530867; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 1 3 4 25 At1g50570 C2 domain-containing protein low similarity to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain 1 3 5 1 At1g50740 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 1 3 5 2 At1g50800 hypothetical protein 1 3 5 3 At1g51010 expressed protein 1 3 5 4 At1g51080 expressed protein 1 3 5 5 At1g53710 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 1 3 5 6 At1g53780 "26S proteasome AAA-ATPase subunit, putative similar to 26S proteasome AAA-ATPase subunit RPT1 SP:Q41365 from [Spinacia oleracea]" 1 3 5 7 At1g53935 hypothetical protein 1 3 5 8 At1g54000 "myrosinase-associated protein, putative similar to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216391, GI:1216389 from [Brassica napus]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; contains 1 predicted transmembrane domain" 1 3 5 9 At1g54115 "cation exchanger, putative " 1 3 5 10 At1g54170 ataxin-2-related similar to SCA2 (GI:1770390) [Homo sapiens]; similar to ataxin-2 (GI:3005020) [Mus musculus] 1 3 5 11 At1g54310 expressed protein 1 3 5 12 At1g54370 "sodium proton exchanger, putative (NHX5) contains similarity to Na+/H+ antiporter GI:1655701 from [Xenopus laevis]; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563; contains non-consensus AT-AC splice sites at introns 3 and 10" 1 3 5 13 At1g58030 amino acid permease family protein similar to SP|P18581 Low-affinity cationic amino acid transporter-2 (CAT-2) (T-cell early activation protein) {Mus musculus}; contains Pfam profile PF00324: Amino acid permease 1 3 5 14 At1g58100 "TCP family transcription factor, putative similar to auxin-induced basic helix-loop-helix transcription factor GI:5731257 from [Gossypium hirsutum]" 1 3 5 15 At1g58265 cytochrome P450-related 1 3 5 16 At1g58300 "heme oxygenase, putative similar to heme oxygenase 4 GI:14485565 from [Arabidopsis thaliana]" 1 3 5 17 At1g58480 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 3 5 18 At1g58766 hypothetical protein 1 3 5 19 At1g59560 expressed protein contains similarity to apoptosis inhibitors 1 3 5 20 At1g59610 "dynamin-like protein, putative (ADL3) strong similarity to dynamin-like protein 6 (ADL6) [Arabidopsis thaliana] GI:6651399; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain, PF00169: PH domain; identical to cDNA dynamin-like protein ADL3, GI:4803835" 1 3 5 21 At1g62540 "flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase GB:AAA21178 GI:349534 from Oryctolagus cuniculus [SP|P32417], SP|P97501 from Mus musculus; contains Pfam profile PF00743 Flavin-binding monooxygenase-like" 1 3 5 22 At1g62610 short-chain dehydrogenase/reductase (SDR) family protein contains similarity to 3-oxoacyl-[acyl-carrier protein] reductase SP:P51831 from [Bacillus subtilis] 1 3 5 23 At1g62780 expressed protein 1 3 5 24 At1g62800 "aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana]" 1 3 5 25 At1g62960 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to GI:1173638 [GB:U35779] from [Triticum aestivum] (Plant Mol. Biol. 31 (5), 1009-1020 (1996)), GI:1813331 from Vigna radiata" 1 3 6 1 At1g63010 SPX (SYG1/Pho81/XPR1) domain-containing protein contains Pfam profile PF03105: SPX domain 1 3 6 2 At1g63160 "replication factor C 40 kDa, putative similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit (Replication factor C 40 kDa subunit, A1 40 kDa subunit, RF-C 40 kDa subunit, RFC40) [Mus musculus]" 1 3 6 3 At1g63210 hypothetical protein contains Pfam profile: PF04283 protein of unknown function (DUF439) 1 3 6 4 At1g65960 glutamate decarboxylase 2 (GAD 2) similar to glutamate decarboxylase (gad) GI:294111 from [Petunia hybrida] 1 3 6 5 At1g66020 terpene synthase/cyclase family protein contains Pfam profile: PF01397: Terpene synthase family 1 3 6 6 At1g66160 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 1 3 6 7 At1g66220 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa]; contains Pfam profiles: PF00082 Subtilase family (3 copies) 1 3 6 8 At1g66380 myb family transcription factor (MYB114) similar to myb-related protein An2 GI:7673090 from [Petunia x hybrida] 1 3 6 9 At1g66440 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 1 3 6 10 At1g66600 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 1 3 6 11 At1g66660 "seven in absentia (SINA) protein, putative similar to SIAH2 protein [Brassica napus var. napus] GI:7657878; contains Pfam profile PF03145: Seven in absentia protein family" 1 3 6 12 At1g69325 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 1 3 6 13 At1g69380 expressed protein predicated by genscan+ 1 3 6 14 At1g69510 expressed protein 1 3 6 15 At1g69540 MADS-box family protein contains Pfam profile: PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 1 3 6 16 At1g69720 heme oxygenase 3 (HO3) similar to heme oxygenase 3 [Arabidopsis thaliana] gi|14485563|gb|AAK63006 1 3 6 17 At1g69780 homeobox-leucine zipper protein 13 (HB-13) / HD-ZIP transcription factor 13 identical to homeobox gene 13 protein (GP:12325190) [Arabidopsis thaliana] 1 3 6 18 At1g69960 serine/threonine protein phosphatase PP2A-5 catalytic subunit (PP2A5) identical to SP|O04951|P2A5_ARATH Serine/threonine protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 1 3 6 19 At1g70030 paired amphipathic helix repeat-containing protein similar to Sin3 protein [Yarrowia lipolytica] GI:18076824; contains Pfam profile PF02671: Paired amphipathic helix repeat 1 3 6 20 At1g72830 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 1 3 6 21 At1g72870 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 1 3 6 22 At1g73050 "(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|52707]; contains Pfam protile PF00732 GMC oxidoreductase" 1 3 6 23 At1g73120 expressed protein 1 3 6 24 At1g73260 trypsin and protease inhibitor family protein / Kunitz family protein similar to trypsin inhibitor propeptide [Brassica oleracea] GI:841208; contains Pfam profile PF00197: Trypsin and protease inhibitor 1 3 6 25 At1g73320 expressed protein 1 3 7 1 At1g73480 "hydrolase, alpha/beta fold family protein low similarity to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 7 2 At1g73550 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 3 7 3 AT5G57480 PC-1 C12 1 3 7 4 3XSSC PC-1 C24 1 3 7 5 AT1G29930 PC-1 G12 1 3 7 6 3XSSC PC-1 G24 1 3 7 7 AT3G44150 PC-1 K12 1 3 7 8 3XSSC PC-1 K24 1 3 7 9 AT4G00810 PC-1 O12 1 3 7 10 3XSSC PC-1 O24 1 3 7 11 At1g76380 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 1 3 7 12 At1g76410 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 7 13 At1g76550 "pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative strong similarity to SP|Q41140 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (PPI-PFK) {Ricinus communis}; contains Pfam profile PF00365: Phosphofructokinase" 1 3 7 14 At1g76610 "hypothetical protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 3 7 15 At1g76780 expressed protein ; expression supported by MPSS 1 3 7 16 At1g76830 F-box family protein contains F-box domain Pfam:PF00646 1 3 7 17 At1g76960 expressed protein 1 3 7 18 At1g77000 F-box family protein similar to GP|21554029| F-box protein AtFBL5 from [Arabidopsis thaliana]; similar to F-box protein FBL2 GI:6063090 from [Homo sapiens] 1 3 7 19 At1g79650 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 1 3 7 20 At1g79690 MutT/nudix family protein contains Pfam NUDIX domain [PF00293]; very low similarity to Chain A and Chain B of Escherichia coli isopentenyl diphosphate:dimethylallyl diphosphate isomerase [gi:15826361] [gi:15826360] 1 3 7 21 At1g79830 expressed protein weak similarity to TATA element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo sapiens] 1 3 7 22 At1g79880 La domain-containing protein contains Pfam profile PF05383: La domain; similar to putative protein GB:CAA18589 [Arabidopsis thaliana] 1 3 7 23 At1g80000 expressed protein identical to unknown protein GB:AAD55481 [Arabidopsis thaliana] 1 3 7 24 At1g80050 adenine phosphoribosyltransferase 2 (APT2) identical to SP|Q42563 Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana} 1 3 7 25 At1g80230 "cytochrome c oxidase family protein contains Pfam domain, PF01215: Cytochrome c oxidase subunit Vb" 1 3 8 1 At1g80270 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat" 1 3 8 2 At2g03140 CAAX amino terminal protease family protein very low similarity to SP|Q40863 Late embryogenesis abundant protein EMB8 from Picea glauca; contains Pfam profile PF02517 CAAX amino terminal protease family protein 1 3 8 3 At2g03200 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 3 8 4 At2g03380 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 8 5 At2g03450 purple acid phosphatase (PAP9) identical to purple acid phosphatase [Arabidopsis thaliana] GI:20257481; contains Pfam profile: PF00149 calcineurin-like phosphoesterase; contains metallo-phosphoesterase motif (PS50185) 1 3 8 6 At2g03620 "magnesium transporter CorA-like family protein (MRS2-5) weak similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein; supporting cDNA gi|25360881|gb|AY150290.1|" 1 3 8 7 At2g03710 MADS-box protein (AGL3) 1 3 8 8 At2g03870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] SWISS-PROT:Q9UK45" 1 3 8 9 At2g03930 hypothetical protein 1 3 8 10 At2g07727 "cytochrome b (MTCYB) (COB) (CYTB) contains Pfam profile PF00033: Cytochrome b(N-terminal)/b6/petB; ontains Pfam profile PF00032: Cytochrome b(C-terminal)/b6/petD; 99% identical to apocytochrome B (GI:6851014), cytochrome b (GI:402962), and Cytochrome b (Swiss-Prot:P42792) [Arabidopsis thaliana]" 1 3 8 11 At2g07739 expressed protein 1 3 8 12 At2g09990 40S ribosomal protein S16 (RPS16A) Same as GB:Q42340 1 3 8 13 At2g10090 hypothetical protein 1 3 8 14 At2g10555 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 1 3 8 15 At2g10870 hypothetical protein 1 3 8 16 At2g11345 "hypothetical protein similar to At3g42690, At4g04130" 1 3 8 17 At2g11520 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 8 18 At2g16380 "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to phosphatidylinositol transfer-like protein III (GI:14486705) [Lotus japonicus]" 1 3 8 19 At2g16430 purple acid phosphatase (PAP10) identical to purple acid phosphatase (PAP10) GI:20257482 from [Arabidopsis thaliana] 1 3 8 20 At2g16587 expressed protein 1 3 8 21 At2g16650 expressed protein 1 3 8 22 At2g16860 GCIP-interacting family protein similar to GCIP-interacting protein mp29 (GI:27372623) [Mus musculus]; similar to GCIP-interacting protein P29 (GI:11967379) [Homo sapiens] 1 3 8 23 At2g16900 expressed protein 1 3 8 24 At2g17036 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 8 25 At2g17080 hypothetical protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 1 3 9 1 At2g19930 "RNA-dependent RNA polymerase family protein contains Pfam domain, PF05183: RNA dependent RNA polymerase" 1 3 9 2 At2g19970 "pathogenesis-related protein, putative similar to pathogenesis-related protein 1 {Arabidopsis thaliana} GI:166805; contains Pfam profile PF00188: SCP-like extracellular protein" 1 3 9 3 At2g20140 "26S protease regulatory complex subunit 4, putative similar to Swiss-Prot:P48601 26S protease regulatory subunit 4 (P26S4) [Drosophila melanogaster]" 1 3 9 4 At2g20180 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 1 3 9 5 At2g20380 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 9 6 At2g20440 RabGAP/TBC domain-containing protein similar to SP|P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains Pfam profile PF00566: TBC domain 1 3 9 7 At2g20585 expressed protein 1 3 9 8 At2g20610 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 1 3 9 9 At2g23260 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 9 10 At2g23320 WRKY family transcription factor identical to WRKY DNA-binding protein 15 GI:13506742 from [Arabidopsis thaliana] 1 3 9 11 At2g23520 expressed protein ; expression supported by MPSS 1 3 9 12 At2g23560 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 9 13 At2g23755 expressed protein 1 3 9 14 At2g23810 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 1 3 9 15 At2g23990 plastocyanin-like domain-containing protein 1 3 9 16 At2g24030 expressed protein and genefinder 1 3 9 17 At2g26870 phosphoesterase family protein low similarity to SP|Q9RGS8 Non-hemolytic phospholipase C precursor (EC 3.1.4.3) (Phosphatidylcholine cholinephosphohydrolase) {Burkholderia pseudomallei}; contains Pfam profile PF04185: Phosphoesterase family 1 3 9 18 At2g26930 "4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (CDPMEK) identical to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase)(CDPMEK) [Arabidopsis thaliana] SWISS-PROT:O81014" 1 3 9 19 At2g27060 "leucine-rich repeat transmembrane protein kinase, putative " 1 3 9 20 At2g27100 C2H2 zinc-finger protein SERRATE (SE) identical to C2H2 zinc-finger protein SERRATE GI:14486602 from [Arabidopsis thaliana] 1 3 9 21 At2g27260 expressed protein 1 3 9 22 At2g27310 F-box family protein contains Pfam PF00646: F-box domain;; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 9 23 At2g27450 "carbon-nitrogen hydrolase family protein low similarity to beta-alanine synthase [Drosophila melanogaster] GI:14334063; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 1 3 9 24 At2g27490 dephospho-CoA kinase family similar to Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase). (Swiss-Prot:Q92BF2) [Listeria innocua]; contains Pfam profile PF01121: Dephospho-CoA kinase 1 3 9 25 At2g30250 WRKY family transcription factor 1 3 10 1 At2g30310 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 1 3 10 2 At2g30470 transcriptional factor B3 family protein low similarity to FUSCA3 [Arabidopsis thaliana] GI:3582518; contains Pfam profile PF02362: B3 DNA binding domain 1 3 10 3 At2g30505 Expressed protein 1 3 10 4 At2g30650 "3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein" 1 3 10 5 At2g30695 expressed protein 1 3 10 6 At2g30870 "glutathione S-transferase, putative supported by cDNA GI:443698 GB:D17673" 1 3 10 7 At2g30930 expressed protein 1 3 10 8 At2g33500 zinc finger (B-box type) family protein 1 3 10 9 At2g33550 gt-2-related weak similarity to gt-2 (GI:20249) [Oryza sativa] 1 3 10 10 At2g33720 expressed protein 1 3 10 11 At2g33750 "purine permease, putative (PUP2) similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profiles PF03151: Domain of unknown function, DUF250, PF00892: Integral membrane protein; identical to cDNA putative purine permease (PUP2) mRNA, partial cds GI:14388590" 1 3 10 12 At2g33845 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 1 3 10 13 At2g33980 MutT/nudix family protein similar to coenzyme A diphosphatase [Mus musculus] GI:12746410; contains Pfam profile PF00293: NUDIX domain 1 3 10 14 At2g34120 hypothetical protein 1 3 10 15 At2g34190 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 1 3 10 16 At2g36780 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 10 17 At2g36835 expressed protein 1 3 10 18 At2g36980 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 10 19 At2g37025 pathogen-responsive DNA-binding protein-related contains weak similarity to BPF-1 (GI:441310) [Petroselinum crispum] 1 3 10 20 At2g37150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 10 21 At2g37200 "integral membrane protein, putative contains 4 transmembrane domains; contains Pfam PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) [Arabidopsis thaliana]" 1 3 10 22 At2g37370 hypothetical protein 1 3 10 23 At2g37420 kinesin motor protein-related 1 3 10 24 At2g40020 expressed protein 1 3 10 25 At2g40070 expressed protein 1 3 11 1 At2g40170 Em-like protein GEA6 (EM6) identical toSP|Q02973 Em-like protein GEA6 {Arabidopsis thaliana}; contains Pfam profile PF00477: Small hydrophilic plant seed protein 1 3 11 2 At2g40220 abscisic acid-insensitive 4 (ABI4) identical to AP2 domain transcription factor ABI4 GI:4587996 from [Arabidopsis thaliana]; sucrose uncoupled-6 (sun6) mutation PMID: 10972884 1 3 11 3 At2g40390 expressed protein 1 3 11 4 At2g40420 amino acid transporter family protein similar to neuronal glutamine transporter [Rattus norvegicus] GI:6978016; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 1 3 11 5 At2g40580 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 11 6 At2g40640 expressed protein 1 3 11 7 At2g43180 expressed protein 1 3 11 8 At2g43220 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 11 9 At2g43410 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 1 3 11 10 At2g43460 60S ribosomal protein L38 (RPL38A) 1 3 11 11 At2g43630 expressed protein 1 3 11 12 At2g43670 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 1 3 11 13 At2g43840 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 3 11 14 At2g43890 "polygalacturonase, putative / pectinase, putative similar to SP|P48979 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus persica}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 3 11 15 At2g46510 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 11 16 At2g46560 "transducin family protein / WD-40 repeat family protein similar to CPY (GI:3096961) {Chironomus thummi}; contains Pfam PF00400: WD domain, G-beta repeat (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499" 1 3 11 17 At2g46735 expressed protein 1 3 11 18 At2g46790 "pseudo-response regulator 9 (APRR9) / timing of CAB expression 1-like protein (TL1) identical to pseudo-response regulator 9 GI:10281000 from [Arabidopsis thaliana], timing of CAB expression 1-like protein [Arabidopsis thaliana] GI:9247022; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA timing of CAB expression 1-like protein GI:9247021" 1 3 11 19 At2g46915 expressed protein and genscan 1 3 11 20 At2g46970 "basic helix-loop-helix (bHLH) protein, putative similar to PIF3 like basic Helix Loop Helix protein (PIL1) [Arabidopsis thaliana] GI:22535492; contains Myc-type, 'helix-loop-helix' dimerization domain signature, PROSITE:PS00038" 1 3 11 21 At2g47130 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 1 3 11 22 At2g47190 myb family transcription factor (MYB2) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 3 11 23 At3g02500 expressed protein 1 3 11 24 At3g02540 "ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain;" 1 3 11 25 At3g02690 integral membrane family protein similar to PecM protein (GI:5852331) {Vogesella indigofera} and PecM protein (SP:P42194) [Erwinia chrysanthemi] 1 3 12 1 At3g02750 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 1 3 12 2 At3g02900 expressed protein 1 3 12 3 At3g02960 copper-binding protein-related low similarity to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 1 3 12 4 At3g03140 expressed protein 1 3 12 5 At3g03200 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) {Arabidopsis thaliana} 1 3 12 6 At3g05750 expressed protein 1 3 12 7 At3g05810 expressed protein 1 3 12 8 At3g05970 "long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase (LACS6) strong similarity to AMP-binding protein (MF39P) gi:1617274 from Brassica napus, similar to putative long-chain-fatty-acid--CoA ligase (brain isozyme) GB:P33124 [Rattus norvegicus]; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA AtLACS6 for long-chain acyl-CoA synthetase GI:22531705" 1 3 12 9 At3g06020 expressed protein ; expression supported by MPSS 1 3 12 10 At3g06140 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 1 3 12 11 At3g06190 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain 1 3 12 12 At3g06360 arabinogalactan-protein (AGP27) 1 3 12 13 At3g06420 "autophagy 8h (APG8h) identical to autophagy 8h [Arabidopsis thaliana] GI:19912165; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3; supporting cDNA gi|19912164|dbj|AB073182.1|" 1 3 12 14 At3g09350 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 12 15 At3g09410 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase 1 3 12 16 At3g09580 "amine oxidase family protein low similarity to SP|P28553 Phytoene dehydrogenase, chloroplast precursor (Phytoene desaturase) from Glycine max; contains Pfam profile PF01593 amine oxidase, flavin-containing" 1 3 12 17 At3g09650 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 12 18 At3g09800 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 1 3 12 19 At3g09840 cell division cycle protein 48 (CDC48A) (CDC48) identical to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana} 1 3 12 20 At3g10000 DNA-binding protein-related similar to GT-2 factor [Arabidopsis thaliana GI:416490 1 3 12 21 At3g10060 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans isomerases" 1 3 12 22 At3g12440 extensin family protein contains similarity to Swiss-Prot:Q38913 extensin 1 precursor (AtExt1) (AtExt4) [Arabidopsis thaliana] 1 3 12 23 At3g12500 basic endochitinase identical to basic endochitinase precursor SP:P19171 from [Arabidopsis thaliana] 1 3 12 24 At3g12670 "CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I" 1 3 12 25 At3g12710 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 1 3 13 1 At3g12890 expressed protein 1 3 13 2 At3g12950 expressed protein 1 3 13 3 At3g13065 "leucine-rich repeat transmembrane protein kinase, putative leucine-rich repeat transmembrane protein kinase 1 GB:AAC27894 from [Zea mays]" 1 3 13 4 At3g13100 ABC transporter family protein similar to ATP-binding cassette transporter MRP8 GI:18031899 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter 1 3 13 5 At3g15440 expressed protein 1 3 13 6 At3g15500 no apical meristem (NAM) family protein (NAC3) identical to AtNAC3 [Arabidopsis thaliana] GI:12060424; contains Pfam PF02365: No apical meristem (NAM) domain; similar to jasmonic acid 2 GB:AAF04915 from [Lycopersicon esculentum] 1 3 13 7 At3g15660 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 1 3 13 8 At3g15700 "disease resistance protein, putative similar to NBS/LRR disease resistance protein [Arabidopsis thaliana] gi|3309619|gb|AAC26125; contains Pfam profile: PF00931 NB-ARC domain" 1 3 13 9 At3g15880 "WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies)" 1 3 13 10 At3g15920 phox (PX) domain-containing protein weak similarity to myosin heavy chain [Rana catesbeiana] GI:4249699; contains Pfam profile PF00787: PX domain 1 3 13 11 At3g16080 60S ribosomal protein L37 (RPL37C) similar to ribosomal protein L37 GB:BAA04888 from [Homo sapiens] 1 3 13 12 At3g16140 "photosystem I reaction center subunit VI, chloroplast, putative / PSI-H, putative (PSAH1) identical to SP|Q9SUI7; similar to PSI-H precursor [Nicotiana sylvestris] GI:407353; contains Pfam profile PF03244: Photosystem I reaction centre subunit VI" 1 3 13 13 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 1 3 13 14 At3g18830 "mannitol transporter, putative similar to mannitol transporter [Apium graveolens var. dulce] GI:12004316; contains Pfam profile PF00083: major facilitator superfamily protein" 1 3 13 15 At3g18980 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 1 3 13 16 At3g19030 expressed protein contains similarity to phosphoserine aminotransferase GB:P19689 from [Yersinia enterocolitica] 1 3 13 17 At3g19190 expressed protein 1 3 13 18 At3g19250 hypothetical protein 1 3 13 19 At3g19410 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; similar to hypothetical protein GB:AAC69119 from [Arabidopsis thaliana] 1 3 13 20 At3g19470 F-box family protein contains F-box domain Pfam:PF00646 1 3 13 21 At3g22190 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 3 13 22 At3g22235 expressed protein 1 3 13 23 At3g22415 expressed protein 1 3 13 24 At3g22425 imidazoleglycerol-phosphate dehydratase 1 (IGPD1) identical to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; supporting cDNA gi|437212|gb|U02689.1|ATU02689 1 3 13 25 At3g22560 GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile:PF00583 Acetyltransf:Acetyltransferase (GNAT) family 1 3 14 1 At3g22630 "20S proteasome beta subunit D (PBD1) (PRGB) identical to GB:CAA74026 from [Arabidopsis thaliana] ( FEBS Lett. (1997) 416 (3), 281-285); identical to cDNA proteasome subunit prgb GI:2511589" 1 3 14 2 At3g22810 expressed protein ; expression supported by MPSS 1 3 14 3 At3g22860 "eukaryotic translation initiation factor 3 subunit 8, putative / eIF3c, putative similar to eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) [Arabidopsis thaliana] SWISS-PROT:O49160" 1 3 14 4 At3g25760 early-responsive to dehydration stress protein (ERD12) nearly identical to early-responsive to dehydration (ERD12) protein [GI:15320414]; similar to allene oxide cyclase GI:8977961 from [Lycopersicon esculentum]; identical to cDNA ERD12 partial cds GI:15320413 1 3 14 5 At3g25810 "myrcene/ocimene synthase, putative similar to GI:9957293; contains Pfam profile: PF01397 terpene synthase family" 1 3 14 6 At3g25940 transcription factor S-II (TFIIS) domain-containing protein similar to SP|O94703 DNA-directed RNA polymerase I 13.1 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profile PF01096: Transcription factor S-II (TFIIS) 1 3 14 7 At3g26000 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 3 14 8 At3g26130 glycosyl hydrolase family 5 protein / cellulase family protein contains Pfam profile: PF00150 cellulase (glycosyl hydrolase family 5) 1 3 14 9 At3g26180 "cytochrome P450 71B20, putative (CYP71B2) identical to cytochrome P450 71B20 (SP:Q9LTM3) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 1 3 14 10 At3g26350 expressed protein ; expression supported by MPSS 1 3 14 11 At3g26410 expressed protein 1 3 14 12 At3g29100 vesicle transport v-SNARE 13 (VTI13) / vesicle soluble NSF attachment protein receptor 13 identical to identical to Vesicle transport v-SNARE 13 (SP:Q9LVP9) {Arabidopsis thaliana}; similar to v-snare AtVTI1a (GI:6690274) (GB:AAF24061) [Arabidopsis thaliana] 1 3 14 13 At3g29160 Snf1-related protein kinase (KIN11) identical to protein kinase AKin11 GI:1729444 from [Arabidopsis thaliana] 1 3 14 14 At3g29270 expressed protein 1 3 14 15 At3g29320 "glucan phosphorylase, putative similar to alpha-glucan phosphorylase, L isozyme 1 precursor GB:P04045 from [Solanum tuberosum] (J. Biochem. 106 (4), 691-695 (1989))" 1 3 14 16 At3g29560 hypothetical protein 1 3 14 17 At3g29610 hypothetical protein 1 3 14 18 At3g29785 hypothetical protein 1 3 14 19 At3g29796 hypothetical protein 1 3 14 20 At3g43900 "hypothetical protein predicted protein, Arabidopsis thaliana" 1 3 14 21 At3g43960 "cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana]" 1 3 14 22 At3g44130 F-box family protein contains F-box domain Pfam:PF00646 1 3 14 23 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein low similarity to dihydrolipoamide dehydrogenase from Clostridium magnum [GI:472330]; contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 1 3 14 24 At3g44370 expressed protein weak similarity to AtOXA1 [Arabidopsis thaliana] GI:6624207 1 3 14 25 At3g44460 basic leucine zipper transcription factor (BZIP67) identical to basic leucine zipper transcription factor GI:18656053 from [Arabidopsis thaliana]; identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052 1 3 15 1 At3g44620 low molecular weight phosphotyrosine protein phosphatase family protein contains Pfam profile: PF01451 low molecular weight phosphotyrosine protein phosphatase 1 3 15 2 At3g44690 expressed protein 1 3 15 3 At3g47530 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 15 4 At3g47570 "leucine-rich repeat transmembrane protein kinase, putative protein kinase Xa21 - Oryza sativa, PIR:A57676" 1 3 15 5 At3g47740 "ABC transporter family protein ATP binding cassette transporter ABC1, Homo sapiens, PIR2:A54774" 1 3 15 6 At3g47800 aldose 1-epimerase family protein similar to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149] from [Acinetobacter calcoaceticus]; contains Pfam profile PF01263 Aldose 1-epimerase 1 3 15 7 At3g47960 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 1 3 15 8 At3g48020 expressed protein 1 3 15 9 At3g48170 "betaine-aldehyde dehydrogenase, putative similar to betaine-aldehyde dehydrogenase, chloroplast precursor (BADH) [Arabidopsis thaliana] SWISS-PROT:Q9S795" 1 3 15 10 At3g48210 expressed protein 1 3 15 11 At3g51100 expressed protein 1 3 15 12 At3g51160 "GDP-D-mannose-4,6-dehydratase (MUR1) almost identical to GDP-D-mannose-4,6-dehydratase (MUR1) GI:1764100 from [Arabidopsis thaliana]" 1 3 15 13 At3g51340 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 1 3 15 14 At3g51390 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 1 3 15 15 At3g51570 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 15 16 At3g51620 expressed protein 1 3 15 17 At3g51770 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 1 3 15 18 At3g51810 Em-like protein GEA1 (EM1) identical to SP|Q07187 Em-like protein GEA1 (EM1) {Arabidopsis thaliana}; contains Pfam profile PF00477: Small hydrophilic plant seed protein 1 3 15 19 At3g54320 "ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana]" 1 3 15 20 At3g54380 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 1 3 15 21 At3g54520 hypothetical protein 1 3 15 22 At3g54580 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 3 15 23 At3g54760 "dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor (Dentin phosphophoryn DPP, Dentin sialoprotein DSP) [Homo sapiens]" 1 3 15 24 At3g54820 "aquaporin, putative similar to plasma membrane aquaporin GI:3551133 from [Raphanus sativus]" 1 3 15 25 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 1 3 16 1 At3g54970 expressed protein 1 3 16 2 At3g57800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supported by full-length cDNA gi:20127059 1 3 16 3 At3g57850 hypothetical protein 1 3 16 4 At3g58030 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 16 5 At3g58100 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum]; C-terminal homology only 1 3 16 6 At3g58280 hypothetical protein 1 3 16 7 At3g58340 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 3 16 8 At3g58500 serine/threonine protein phosphatase PP2A-4 catalytic subunit (PP2A4) identical to SP|P48578 Serine/threonine protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) (Protein phosphatase 2A isoform 4) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 1 3 16 9 At3g58560 endonuclease/exonuclease/phosphatase family protein similar to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 1 3 16 10 At3g61280 expressed protein ; expression supported by MPSS 1 3 16 11 At3g61350 "SKP1 interacting partner 4 (SKIP4) almost idential to SKP1 interacting partner 4 GI:10716953 from [Arabidopsis thaliana], 42 aa extension at N-terminal; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 1 3 16 12 At3g61500 hypothetical protein 1 3 16 13 At3g61550 "zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 16 14 At3g61710 autophagy protein Apg6 family contains weak similarity to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam profile PF04111: Autophagy protein Apg6 1 3 16 15 At3g61760 "dynamin-like protein B (DL1B) identical to dynamin-like protein B [Arabidopsis thaliana] GI:27543504; strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 1 3 16 16 At3g61910 "no apical meristem (NAM) family protein no apical meristem (NAM) - Petunia hybrida, EMBL:PHDNANAM" 1 3 16 17 At3g61950 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 16 18 At4g00905 expressed protein 1 3 16 19 At4g00955 expressed protein 1 3 16 20 At4g01100 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 3 16 21 At4g01160 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 1 3 16 22 At4g01310 "ribosomal protein L5 family protein contains Pfam profiles PF00673: ribosomal L5P family C-terminus, PF00281: ribosomal protein L5" 1 3 16 23 At4g01370 "mitogen-activated protein kinase, putative / MAPK, putative (MPK4) identical to mitogen-activated protein kinase homolog (AtMPK4)[Arabidopsis thaliana] SWISS-PROT:Q39024; PMID:12119167" 1 3 16 24 At4g01525 expressed protein 1 3 16 25 At4g01570 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 17 1 At4g04400 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 1 3 17 2 At4g04470 peroxisomal membrane protein 22 kDa (PMP22) identical to peroxisomal membrane protein [Arabidopsis thaliana] gi|3980254|emb|CAA06834 1 3 17 3 At4g04670 "Met-10+ like family protein / kelch repeat-containing protein contains Pfam profiles PF01344: Kelch motif, PF02475: Met-10+ like-protein" 1 3 17 4 At4g04720 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase(CDPK) [Carrot] SWISS-PROT:P28582" 1 3 17 5 At4g04885 pre-mRNA cleavage complex-related contains weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens] 1 3 17 6 At4g04930 "fatty acid desaturase family protein similar to D. melanogaster Des-1 protein, GenBank accession number X94180; contains Pfam profile PF00487 Fatty acid desaturase domain" 1 3 17 7 At4g05070 expressed protein 1 3 17 8 At4g05120 "equilibrative nucleoside transporter, putative (ENT3) identical to putative equilibrative nucleoside transporter ENT3 [Arabidopsis thaliana] GI:16518993; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter" 1 3 17 9 At4g09840 expressed protein 1 3 17 10 At4g09900 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393, SP|Q40708 PIR7A protein {Oryza sativa}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 3 17 11 At4g10040 "cytochrome c, putative similar to cytochrome c [Pumpkin, Winter squash] SWISS-PROT:P00051" 1 3 17 12 At4g10100 "molybdenum cofactor synthesis family protein similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) [Homo sapiens]; contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; contains Pfam PF02597: ThiS family" 1 3 17 13 At4g10240 "zinc finger (B-box type) family protein zinc-finger protein R2931, Oryza sativa, PIR3:JE0116" 1 3 17 14 At4g10290 hypothetical protein 1 3 17 15 At4g10450 "60S ribosomal protein L9 (RPL90D) ribosomal protein L9, cytosolic - garden pea, PIR2:S19978" 1 3 17 16 At4g10520 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 1 3 17 17 At4g13300 "terpene synthase/cyclase family protein predicted terpene synthase TS1, Arabidopsis thaliana, Y11188" 1 3 17 18 At4g13345 "TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE)" 1 3 17 19 At4g13500 expressed protein 1 3 17 20 At4g13540 expressed protein 1 3 17 21 At4g13710 pectate lyase family protein 1 3 17 22 At4g13750 expressed protein 1 3 17 23 At4g13870 Werner Syndrome-like exonuclease (WEX) contains Pfam profile PF01612: 3'-5' exonuclease; identical to Werner Syndrome-like exonuclease [Arabidopsis thaliana] GP:28195109 gb:AAO33765 1 3 17 24 At4g13940 adenosylhomocysteinase / S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH) identical to SP|O23255 Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) {Arabidopsis thaliana}; strong similarity to SP|P50248 Adenosylhomocysteinase (EC 3.3.1.1) {Nicotiana sylvestris} 1 3 17 25 At4g16280 "flowering time control protein / FCA gamma (FCA) identical to SP|O04425 Flowering time control protein FCA {Arabidopsis thaliana}; four alternative splice variants, one splicing isoform contains a non-consensus CA donor splice site, based on cDNA: gi:2204090" 1 3 18 1 At4g16350 calcineurin B-like protein 6 (CBL6) identical to calcineurin B-like protein 6 (GI:11065943) [Arabidopsis thaliana] 1 3 18 2 At4g16500 cysteine protease inhibitor family protein / cystatin family protein similar to SP|Q06445 Cysteine proteinase inhibitor (Cystatin) {Vigna unguiculata}; contains Pfam profile PF00031: Cystatin domain 1 3 18 3 At4g16530 expressed protein contains Pfam profile PF04510: Family of unknown function (DUF577) 1 3 18 4 At4g16690 "esterase/lipase/thioesterase family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393, SP|Q40708 PIR7A protein {Oryza sativa}; contains Interpro entry IPR000379" 1 3 18 5 At4g16710 glycosyltransferase family protein 28 low similarity to C terminus subunit of GlcA transferase from Escherichia coli [GI:2586169]; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain 1 3 18 6 At4g16835 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 3 18 7 At4g16860 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 18 8 At4g19450 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 1 3 18 9 At4g19510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 18 10 At4g19660 "ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain" 1 3 18 11 At4g19700 expressed protein 1 3 18 12 At4g19870 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 18 13 At4g19930 "F-box family protein similar to F-box protein family, AtFBX8 (GI:20197464) {Arabidopsis thaliana}; contains Pfam PF00646: F-box domain" 1 3 18 14 At4g20080 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 1 3 18 15 At4g20140 "leucine-rich repeat transmembrane protein kinase, putative Cf-2.2, Lycopersicon pimpinellifolium, PIR:T10515" 1 3 18 16 At4g22920 expressed protein 1 3 18 17 At4g22980 expressed protein ; expression supported by MPSS 1 3 18 18 At4g23150 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 3 18 19 At4g23210 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 3 18 20 At4g23350 "expressed protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 1 3 18 21 At4g23410 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 1 3 18 22 At4g23550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA binding domain 1 3 18 23 At4g23600 "coronatine-responsive tyrosine aminotransferase / tyrosine transaminase similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II; identical to cDNA coronatine-regulated tyrosine aminotransferase (F9D16.70) GI:15076852" 1 3 18 24 At4g26170 expressed protein 1 3 18 25 At4g26210 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 1 3 19 1 At4g26380 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 19 2 At4g26420 "S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to caffeine synthase [Camellia sinensis][GI:9967143], defense-related protein cjs1 [Brassica carinata][GI:14009292], S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase [Clarkia breweri][GI:6002712]" 1 3 19 3 At4g26570 calcineurin B-like protein 3 (CBL3) identical to calcineurin B-like protein 3 (GI:22136404) [Arabidopsis thaliana] 1 3 19 4 At4g26610 "protein kinase, putative similar to protein kinase G11A [Oryza sativa] SWISS-PROT:P47997" 1 3 19 5 At4g26760 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 3 19 6 At4g26820 hypothetical protein 1 3 19 7 At4g29400 expressed protein ; expression supported by MPSS 1 3 19 8 At4g29460 "phospholipase A2 gamma, secretory low molecular weight identical to secretory low molecular weight phospholipase A2 gamma [Arabidopsis thaliana] GI:26006457; contains INTERPRO domain IPR001211 phospholipase A2" 1 3 19 9 At4g29640 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 5 (CDA5) [Arabidopsis thaliana] GI:3818578, cytidine deaminase homolog DesG [Arabidopsis thaliana] GI:4836449; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 1 3 19 10 At4g29680 type I phosphodiesterase/nucleotide pyrophosphatase family protein similar to SP|P06802 Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (EC 3.6.1.9) {Mus musculus}; contains Pfam profile PF01663: Type I phosphodiesterase / nucleotide pyrophosphatase 1 3 19 11 At4g29840 "threonine synthase, chloroplast identical to SP|Q9S7B5 Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}" 1 3 19 12 At4g29880 "leucine-rich repeat family protein contains leucine rich repeats, Pfam:PF00560" 1 3 19 13 At4g30050 expressed protein ; expression supported by MPSS 1 3 19 14 At4g30110 "ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein / heavy-metal-associated domain-containing protein similar to cadmium efflux pump protein from Geobacillus stearothermophilus [GI:16753175], cadmium resistance protein B from Staphylococcus aureus [GI:14020985]" 1 3 19 15 At4g32590 ferredoxin-related contains Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding domain 1 3 19 16 At4g32630 hypothetical protein 1 3 19 17 At4g32810 "dioxygenase-related low similarity to b,b-carotene-9',10'-dioxygenase [Mus musculus] GI:12666529; contains Pfam profile PF03055: Retinal pigment epithelial membrane protein" 1 3 19 18 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 1 3 19 19 At4g32980 homeobox protein (ATH1) identical to SWISS-PROT:P48731 homeobox protein ATH1. [Arabidopsis thaliana] 1 3 19 20 At4g33030 UDP-sulfoquinovose synthase / sulfite:UDP-glucose sulfotransferase / sulfolipid biosynthesis protein (SQD1) identical to gi:2736155 1 3 19 21 At4g33200 "myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]" 1 3 19 22 At4g33260 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); WD-repeat protein -Daucus carota, PID:g2253631" 1 3 19 23 AT5G57480 PC-1 C12 1 3 19 24 3XSSC PC-1 C24 1 3 19 25 AT1G29930 PC-1 G12 1 3 20 1 3XSSC PC-1 G24 1 3 20 2 AT3G44150 PC-1 K12 1 3 20 3 3XSSC PC-1 K24 1 3 20 4 AT4G00810 PC-1 O12 1 3 20 5 3XSSC PC-1 O24 1 3 20 6 At4g35820 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 3 20 7 At4g35880 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 1 3 20 8 At4g36030 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 1 3 20 9 At4g36060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 1 3 20 10 At4g36210 expressed protein contains Pfam PF05277: Protein of unknown function (DUF726) 1 3 20 11 At4g36270 "ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Mus musculus] GI:5410255; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein" 1 3 20 12 At4g36460 hypothetical protein 1 3 20 13 At4g36515 expressed protein 1 3 20 14 At4g39170 "SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and phosphatidylinositol-phosphatidylcholine transfer protein SEC14, Yarrowia lipolytica, PIR2:S43745;contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus" 1 3 20 15 At4g39230 "isoflavone reductase, putative similar to allergenic isoflavone reductase-like protein Bet v 6.0102 [Betula pendula][GI:10764491]; contains Pfam profile PF02716: Isoflavone reductase" 1 3 20 16 At4g39330 "mannitol dehydrogenase, putative nearly identical to SP|P42734, probable mannitol dehydrogenase" 1 3 20 17 At4g39370 "ubiquitin-specific protease 27, putative (UBP27) similar to GI:11993494; ubiquitin specific protease 66 - Gallus gallus,PID:g3800764" 1 3 20 18 At4g39540 shikimate kinase family protein similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202 1 3 20 19 At4g39570 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 3 20 20 At4g39740 "electron transport SCO1/SenC family protein similar to SP|P23833 SCO1 protein, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF02630: SCO1/SenC" 1 3 20 21 At4g39770 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 1 3 20 22 At5g03310 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 1 3 20 23 At5g03360 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 3 20 24 At5g03500 transcriptional co-activator-related low similarity to transcriptional co-activator CRSP33 [Homo sapiens] GI:4220890 1 3 20 25 At5g03550 hypothetical protein 1 3 21 1 At5g03720 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 1 3 21 2 At5g03780 expressed protein 1 3 21 3 At5g03950 hypothetical protein 1 3 21 4 At5g04010 expressed protein 1 3 21 5 At5g06590 expressed protein 1 3 21 6 At5g06650 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 1 3 21 7 At5g06810 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 3 21 8 At5g06870 "polygalacturonase inhibiting protein 2 (PGIP2) identical to polygalacturonase inhibiting protein 2 (PGIP2) [Arabidopsis thaliana] gi|7800201|gb|AAF69828; contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 1 3 21 9 At5g07030 aspartyl protease family protein contains Pfam profile:PF00026 eukaryotic aspartyl protease 1 3 21 10 At5g07090 40S ribosomal protein S4 (RPS4B) 1 3 21 11 At5g07240 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 3 21 12 At5g07300 "copine, putative strong similarity to BONZAI1 [Arabidopsis thaliana] GI:15487382; contains Pfam profile PF00168: C2 domain" 1 3 21 13 At5g10390 "histone H3 identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 1 3 21 14 At5g10450 14-3-3 protein GF14 lambda (GRF6) (AFT1) identical to 14-3-3 GF14lambda GI:1345595 from [Arabidopsis thaliana] 1 3 21 15 At5g10610 "cytochrome P450 family protein similar to Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana]; similar to cytochrome P450, Helianthus tuberosus, EMBL:HTCYP81L" 1 3 21 16 At5g10670 hypothetical protein 97% similarity to At3g28240 (Arabidopsis thaliana); predicted protein 1 3 21 17 At5g10810 "enhancer of rudimentary protein, putative identical to enhancer of rudimentary homolog SP:Q96319 from [Arabidopsis thaliana]; contains Pfam profile: PF01133 enhancer of rudimentary" 1 3 21 18 At5g10870 "chorismate mutase, cytosolic (CM2) identical to gi:5732016" 1 3 21 19 At5g11030 expressed protein 1 3 21 20 At5g11090 serine-rich protein-related contains some similarity to serine-rich proteins 1 3 21 21 At5g14230 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 1 3 21 22 At5g14280 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 1 3 21 23 At5g14460 pseudouridylate synthase TruB family protein similar to SP|P09171 tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli O157:H7}; contains Pfam profile PF01509: TruB family pseudouridylate synthase (N terminal domain) 1 3 21 24 At5g14520 "pescadillo-related similar to pescadillo [Zebrafish, Danio rerio] SWISS-PROT:P79741" 1 3 21 25 At5g14670 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus carota]." 1 3 22 1 At5g14730 expressed protein 1 3 22 2 At5g14910 heavy-metal-associated domain-containing protein Pfam profile PF00403: Heavy-metal-associated domain 1 3 22 3 At5g14960 "transcription factor, putative / E2F-like repressor E2L1 (E2L1) identical to E2F-like repressor E2L1 GI:20502504 from [Arabidopsis thaliana]" 1 3 22 4 At5g17640 expressed protein 1 3 22 5 At5g17700 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 1 3 22 6 At5g17840 chaperone protein dnaJ-related similar to bundle sheath defective protein 2 (GI:4732091) [Zea mays] 1 3 22 7 At5g17900 expressed protein 1 3 22 8 At5g18080 "auxin-responsive protein, putative similar to GP:3043536 SAUR {Raphanus sativus}" 1 3 22 9 At5g18130 expressed protein similar to unknown protein (gb|AAF00631.1) 1 3 22 10 At5g18270 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 1 3 22 11 At5g18310 "expressed protein predicted proteins, Drosophila melanogaster" 1 3 22 12 At5g20920 "eukaryotic translation initiation factor 2 subunit 2, putative / eIF-2-beta, putative similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5" 1 3 22 13 At5g20960 aldehyde oxidase 1 (AAO1) identical to aldehyde oxidase AAO1 from Arabidopsis thaliana [gi:3172023] isoform contains a GA-donor splice site at intron 10 1 3 22 14 At5g21125 hypothetical protein 1 3 22 15 At5g21222 protein kinase family protein contains Pfam profile: PF00069 protein kinase domain 1 3 22 16 At5g22020 strictosidine synthase family protein similar to SP|P15324 Strictosidine synthase precursor (EC 4.3.3.2) {Rauvolfia mannii}; contains Pfam profile PF03088: Strictosidine synthase 1 3 22 17 At5g22050 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 1 3 22 18 At5g22210 expressed protein 1 3 22 19 At5g22270 expressed protein similar to unknown protein (gb AAF02129.1) 1 3 22 20 At5g24900 "cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; fatty acid omega-hydroxylase cytochrome P450 4A11 - Homo sapiens, PIR:I53015" 1 3 22 21 At5g24960 "cytochrome P450 71A14, putative (CYP71A14) identical to Cytochrome P450 71A14 (SP:P58045) [Arabidopsis thaliana]; cytochrome P450 - Nepeta racemosa, EMBL:Y09423" 1 3 22 22 At5g25140 "cytochrome P450 family protein CYTOCHROME P450 71B1 - Thlaspi arvense, EMBL:L24438" 1 3 22 23 At5g25200 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 1 3 22 24 At5g25360 expressed protein 1 3 22 25 At5g25400 "phosphate translocator-related low siimilarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 1 3 23 1 At5g25520 transcription elongation factor-related contains weak similarity to transcription elongation factors 1 3 23 2 At5g25560 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 1 3 23 3 At5g28570 hypothetical protein 1 3 23 4 At5g28623 hypothetical protein 1 3 23 5 At5g28790 hypothetical protein 1 3 23 6 At5g28840 NAD-dependent epimerase/dehydratase family protein similar to sugar epimerase BlmG from Streptomyces verticillus GI:9937230; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 1 3 23 7 At5g29020 hypothetical protein 1 3 23 8 At5g29602 hypothetical protein 1 3 23 9 At5g31838 hypothetical protein 1 3 23 10 At5g32440 expressed protein 1 3 23 11 At5g37580 "tropomyosin-related low similarity to tropomyosin gene 1, isoform 9D, D.melanogaster, EMBL:DMTRO13 (GI:158696)" 1 3 23 12 At5g37640 polyubiquitin (UBQ9) identical to polyubiquitin (ubq9) gene sequence GI:304120 from [Arabidopsis thaliana] 1 3 23 13 At5g37830 "hydantoinase/oxoprolinase family protein contains Pfam profiles: PF02538 hydantoinase B/oxoprolinase, PF01968 hydantoinase/oxoprolinase, PF05378 hydantoinase/oxoprolinase N-terminal region" 1 3 23 14 At5g37890 "seven in absentia (SINA) protein, putative similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family" 1 3 23 15 At5g38060 expressed protein ; expression supported by MPSS 1 3 23 16 At5g38120 "4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to 4CL2, Arabidopsis thaliana [gi:12229665], 4CL1, Nicotiana tabacum [gi:12229631]; contains Pfam AMP-binding enzyme domain PF00501" 1 3 23 17 At5g38290 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 1 3 23 18 At5g38350 "disease resistance protein (NBS-LRR class), putative domain signature NBS-LRR exists, suggestive of a disease resistance protein." 1 3 23 19 At5g41180 "leucine-rich repeat protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 1 3 23 20 At5g41250 exostosin family protein contains Pfam profile: PF03016 exostosin family 1 3 23 21 At5g41430 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 3 23 22 At5g41490 F-box family protein contains Pfam profile: PF00646 F-box domain 1 3 23 23 At5g41660 hypothetical protein similar to unknown protein (emb|CAB86921.1) 1 3 23 24 At5g41700 "ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131" 1 3 23 25 At5g41850 expressed protein 1 3 24 1 At5g41910 RNA polymerase II mediator complex protein-related similar to SP|P87310 RNA polymerase II mediator complex protein nut2 {Schizosaccharomyces pombe} 1 3 24 2 At5g44560 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 3 24 3 At5g44600 expressed protein 1 3 24 4 At5g44740 UMUC-like DNA repair family protein low similarity to DNA polymerase eta [Homo sapiens] GI:11463971; contains Pfam profile PF00817: ImpB/MucB/SamB family 1 3 24 5 At5g44780 "expressed protein low similarity to SP|Q38732 DAG protein, chloroplast precursor {Antirrhinum majus}" 1 3 24 6 At5g44940 F-box family protein contains F-box domain Pfam:PF00646 1 3 24 7 At5g45000 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 1 3 24 8 At5g45140 "DNA-directed RNA polymerase, putative similar to SP|P22276 DNA-directed RNA polymerase III 130 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 2) {Saccharomyces cerevisiae}; contains Pfam profiles PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF04566: RNA polymerase Rpb2 domain 4, PF04567: RNA polymerase Rpb2 domain 5" 1 3 24 9 At5g45200 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 1 3 24 10 At5g47740 expressed protein 1 3 24 11 At5g47800 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 3 24 12 At5g47950 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna][GI:6166328][PMID:10588064]" 1 3 24 13 At5g48010 "pentacyclic triterpene synthase, putative similar to pentacyclic triterpene synthase [gi:6650207] [PMID: 11247608] Contains Pfam domain PF00432: Prenyltransferase and squalene oxidase repeat" 1 3 24 14 At5g48180 kelch repeat-containing protein contains Pfam PF01344: Kelch motif (5 repeats) ;similar to Tip elongation aberrant protein 1 (Cell polarity protein tea1) (SP:P87061) [Schizosaccharomyces pombe] 1 3 24 15 At5g48230 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 1 3 24 16 At5g48390 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 1 3 24 17 At5g48440 FAD-dependent oxidoreductase family protein low similarity to hydrogen cyanide synthase HcnC from Pseudomonas fluorescens [GI:3220203]; contains Pfam profile PF01266 FAD dependent oxidoreductase 1 3 24 18 At5g51140 pseudouridine synthase family protein low similarity to SP|P23851 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 1 3 24 19 At5g51180 expressed protein 1 3 24 20 At5g51330 meiosis protein-related (DYAD) (SWI1) annotation temporarily based on supporting cDNA gi|18483289|gb|AF466153.1|; supporting cDNA are SWITCH1 splice variant S and SWITCH1 splice variant L (SWI1) GI:16033413 and GI:16033410 1 3 24 21 At5g51390 expressed protein similar to unknown protein (gb|AAB68039.1) 1 3 24 22 At5g51560 "leucine-rich repeat transmembrane protein kinase, putative " 1 3 24 23 At5g51620 expressed protein 1 3 24 24 At5g51760 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phosphatase 2C (GI:10432446) [Nicotiana tabacum]" 1 3 24 25 At5g51810 "gibberellin 20-oxidase, putative similar to gibberellin 20-oxidase GI:1109695, GI:9791186" 1 3 25 1 At5g54570 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 1 3 25 2 At5g54600 "50S ribosomal protein L24, chloroplast (CL24) identical to SP|P92959 50S ribosomal protein L24, chloroplast precursor {Arabidopsis thaliana}" 1 3 25 3 At5g54750 "transport protein particle (TRAPP) component Bet3, putative similar to SP|P36149 Transport protein particle 22 kDa subunit (TRAPP 22 kDa subunit) {Saccharomyces cerevisiae}; contains Pfam profile PF04051: Transport protein particle (TRAPP) component, Bet3" 1 3 25 4 At5g54810 "tryptophan synthase, beta subunit 1 (TSB1) identical to SP|P14671" 1 3 25 5 At5g54940 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 1 3 25 6 At5g55000 "potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein contains Pfam profiles PF02214: K+ channel tetramerisation domain, PF00805: Pentapeptide repeats (8 copies)" 1 3 25 7 At5g55132 expressed protein 1 3 25 8 At5g55180 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 1 3 25 9 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 1 3 25 10 At5g57900 "SKP1/ASK1 interacting partner 1 (SKIP1) / SCF (Skp1-cullin-F-box) ubiquitin ligase identical to SKP1 interacting partner 1 GI:10716947 from [Arabidopsis thaliana], PMID:11387208" 1 3 25 11 At5g58070 "lipocalin, putative similar to temperature stress-induced lipocalin [Triticum aestivum] GI:18650668" 1 3 25 12 At5g58130 RNA recognition motif (RRM)-containing protein 1 3 25 13 At5g58270 mitochondrial half-ABC transporter (STA1) identical to half-molecule ABC transporter ATM3 GI:9964121 from [Arabidopsis thaliana]; almost identical to mitochondrial half-ABC transporter STA1 GI:9187883 from [Arabidopsis thaliana]; identical to cDNA mitochondrial half-ABC transporter (STA1 gene)GI:9187882 1 3 25 14 At5g58320 kinase interacting protein-related low similarity to kinase interacting protein 1 [Petunia integrifolia] GI:13936326 1 3 25 15 At5g58460 "cation/hydrogen exchanger, putative (CHX25) similar to Na+/H+-exchanging protein slr1595, Synechocystis sp., PIR:S74951; monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 3 25 16 At5g58520 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 3 25 17 At5g61110 hypothetical protein 1 3 25 18 At5g61150 leo1-like family protein weak similarity to SP|P38439 LEO1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04004: Leo1-like protein; supporting cDNA gi|21929714|gb|AF490422.1| 1 3 25 19 At5g61310 "cytochrome c oxidase subunit Vc, putative / COX5C, putative similar to cytochrome c oxidase subunit 5c [Helianthus annuus] GI:18409602; contains Pfam profile PF05799: Cytochrome c oxidase subunit Vc (COX5C)" 1 3 25 20 At5g61370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 3 25 21 At5g61530 "small G protein family protein / RhoGAP family protein contains Pfam domain, PF00620: RhoGAP domain" 1 3 25 22 At5g61550 "protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain; protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503" 1 3 25 23 At5g61710 hypothetical protein 1 3 25 24 At5g61770 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 1 3 25 25 At5g64460 expressed protein 1 3 26 1 At5g64490 expressed protein 1 3 26 2 At5g64630 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] 1 3 26 3 At5g64680 expressed protein 1 3 26 4 At5g64816 expressed protein 1 3 26 5 At5g64860 "4-alpha-glucanotransferase, putative / disproportionating enzyme, putative similar to 4-alpha-glucanotransferase SP:Q06801 from [Solanum tuberosum]" 1 3 26 6 At5g65010 asparagine synthetase 2 (ASN2) identical to asparagine synthetase (ASN2) [Arabidopsis thaliana] GI:3859536 1 3 26 7 At5g65050 MADS-box protein (MAF2) 1 3 26 8 At5g67590 "NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-21KD) (CI-21KD). (Swiss-Prot:P25711) [Neurospora crassa]; contains Pfam PF04800: ETC complex I subunit conserved region" 1 3 26 9 At1g18010 expressed protein contains 11 transmembrane domains; 1 3 26 10 At5g36820 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 1 3 26 11 At5g50710 hypothetical protein 1 3 26 12 ath-MIR159b miRNA gene Arabidopsis thaliana miR159b stem-loop 1 3 26 13 ath-MIR165b miRNA gene Arabidopsis thaliana miR165b stem-loop 1 3 26 14 ath-MIR399c miRNA gene Arabidopsis thaliana miR399c stem-loop 1 3 26 15 ath-MIR319c miRNA gene Arabidopsis thaliana miR319c stem-loop 1 3 26 16 atc05 Randomly generated negative control 1 3 26 17 atc11 Randomly generated negative control 1 3 26 18 At5g46430 60S ribosomal protein L32 (RPL32B) 1 3 26 19 atc01 Randomly generated negative control 1 3 26 20 Alien7 Control: Stratagene Spotreport Alien Oligo 1 3 26 21 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 3 26 22 atc09 Randomly generated negative control 1 3 26 23 Alien3 Control: Stratagene Spotreport Alien Oligo 1 3 26 24 Blank Blank 1 3 26 25 Blank Blank 1 4 1 1 atc05 Randomly generated negative control 1 4 1 2 atc11 Randomly generated negative control 1 4 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 1 4 1 4 atc01 Randomly generated negative control 1 4 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 1 4 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 4 1 7 atc09 Randomly generated negative control 1 4 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 1 4 1 9 At1g02840 pre-mRNA splicing factor SF2 (SF2) / SR1 protein identical to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana} 1 4 1 10 At1g02860 "SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related weak similarity to tripartite motif protein TRIM13 [Mus musculus] GI:12407427, gpStaf50 [Homo sapiens] GI:899300; contains Pfam profiles PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 1 11 At1g02970 "protein kinase, putative similar to Wee1-like protein GI:5821717 from [Zea mays]" 1 4 1 12 At1g03010 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 1 4 1 13 At1g03140 splicing factor Prp18 family protein contains Pfam profile: PF02840 Prp18 domain 1 4 1 14 At1g03200 expressed protein 1 4 1 15 At1g03380 expressed protein 1 4 1 16 At1g03440 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 1 4 1 17 At1g06100 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 1 4 1 18 At1g06135 expressed protein 1 4 1 19 At1g06280 LOB domain family protein / lateral organ boundaries domain family protein (LBD2) nearly identical to SP|Q9LNB9 Putative LOB domain protein 2 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 1 4 1 20 At1g06350 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 1 4 1 21 At1g06520 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase 1 4 1 22 At1g06580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 1 23 At1g06760 "histone H1, putative similar to histone H1-1 GB:CAA44312 GI:16314 from [Arabidopsis thaliana]; identical to cDNA H1-1C mRNA for histone H1-1 (partial) GI:732560" 1 4 1 24 At1g06790 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 1 4 1 25 At1g09290 expressed protein This gene is continued on the 5' end of BAC T12M14 1 4 2 1 At1g09350 "galactinol synthase, putative contains Pfam profile: PF01501 glycosyl transferase family 8" 1 4 2 2 At1g09500 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 1 4 2 3 At1g09550 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 1 4 2 4 At1g09690 "60S ribosomal protein L21 (RPL21C) Similar to ribosomal protein L21 (gb|L38826). ESTs gb|AA395597,gb|ATTS5197 come from this gene" 1 4 2 5 At1g09750 "chloroplast nucleoid DNA-binding protein-related contains Pfam profile PF00026: Eukaryotic aspartyl protease;b similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 1 4 2 6 At1g09890 expressed protein ; expression supported by MPSS 1 4 2 7 At1g09935 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 1 4 2 8 At1g12530 hypothetical protein ; expression supported by MPSS 1 4 2 9 At1g12600 hypothetical protein 1 4 2 10 At1g12780 "UDP-glucose 4-epimerase / UDP-galactose 4-epimerase / Galactowaldenase identical to SP|Q42605 [GB:CAA90941] from [Arabidopsis thaliana] (Arch. Biochem. Biophys. 327 (1), 27-34 (1996))" 1 4 2 11 At1g12830 expressed protein 1 4 2 12 At1g13000 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 1 4 2 13 At1g13080 "cytochrome P450 family protein identical to gb|D78605 cytochrome P450 monooxygenase from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and gb|T43466 come from this gene" 1 4 2 14 At1g13220 nuclear matrix constituent protein-related similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 1 4 2 15 At1g13270 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 1 4 2 16 At1g15920 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 1 4 2 17 At1g15970 "methyladenine glycosylase family protein similar to SP|P05100 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I, constitutive) {Escherichia coli}; contains Pfam profile PF03352: Methyladenine glycosylase" 1 4 2 18 At1g16140 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 1 4 2 19 At1g16210 expressed protein ESTs gb|T04357 and gb|AA595092 come from this gene 1 4 2 20 At1g16380 "cation/proton exchanger, putative (CHX1) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 4 2 21 At1g16420 "latex-abundant protein, putative (AMC8) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain" 1 4 2 22 At1g16590 "mitotic spindle checkpoint protein, putative similar to Mad2B protein [Homo sapiens] gi|4835900|gb|AAD30290" 1 4 2 23 At1g16650 expressed protein 1 4 2 24 At1g19440 "very-long-chain fatty acid condensing enzyme, putative similar to GB:AAD37122 from [Arabidopsis thaliana]" 1 4 2 25 At1g19490 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 1 4 3 1 At1g19680 expressed protein 1 4 3 2 At1g19730 thioredoxin H-type 4 (TRX-H-4) (GREN) identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4) {Arabidopsis thaliana} 1 4 3 3 At1g19930 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 1 4 3 4 At1g19990 expressed protein ; expression supported by MPSS 1 4 3 5 At1g20190 "expansin, putative (EXP11) similar to GB:U30460 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 1 4 3 6 At1g20260 "vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative strong similarity to SP|P11574 Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) {Arabidopsis thaliana}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF02874: ATP synthase alpha/beta family beta-barrel domain" 1 4 3 7 At1g22970 expressed protein 1 4 3 8 At1g23020 "ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane component" 1 4 3 9 At1g23160 "auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591, auxin-responsive GH3 homologue [Arabidopsis thaliana] GI:11041726; contains Pfam profile PF03321: GH3 auxin-responsive promoter" 1 4 3 10 At1g23210 "glycosyl hydrolase family 9 protein similar to endo-1,4-beta-glucanase GB:CAA67157 GI:2440035 from (Arabidopsis thaliana)" 1 4 3 11 At1g23360 "UbiE/COQ5 methyltransferase family protein similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase GB:BAA25267 GI:2982680 from [Micrococcus luteus]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 1 4 3 12 At1g23400 expressed protein 1 4 3 13 At1g23540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 1 4 3 14 At1g23600 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220; expression supported by MPSS 1 4 3 15 At1g27320 histidine kinase (AHK3) identical to histidine kinase AHK3 [Arabidopsis thaliana] gi|13537198|dbj|BAB40775 1 4 3 16 At1g27370 squamosa promoter-binding protein-like 10 (SPL10) identical to squamosa promoter binding protein-like 10 [Arabidopsis thaliana] GI:5931669; contains Pfam profile PF03110: SBP domain 1 4 3 17 At1g27480 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to LCAT-like lysophospholipase (LLPL) [Homo sapiens] GI:4589720; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 1 4 3 18 At1g27540 "F-box family protein similar to F-box protein family, AtFBX7 (GI:20197899) [Arabidopsis thaliana]; confirmed by FLcDNA GI:16604421; contains uncharacterized Arabidoppsis domain shared by 33 Arabidopsis proteins" 1 4 3 19 At1g27695 glycine-rich protein 1 4 3 20 At1g27750 ubiquitin system component Cue domain-containing protein very low similarity to ASC-1 complex subunit P100 [Homo sapiens] GI:12061187; contains Pfam profile PF02845: CUE domain 1 4 3 21 At1g27920 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 1 4 3 22 At1g27980 pyridoxal-dependent decarboxylase family protein similar to sphingosine-1-phosphate lyase [Homo sapiens] GI:10129683; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain 1 4 3 23 At1g30880 expressed protein similar to ESTs gb|R30049 and gb|T46176 1 4 3 24 At1g30950 unusual floral organ (UFO) / F-box family protein (FBX1) E3 ubiquitin ligase SCF complex F-box subunit; almost identical to unusual floral organs (UFO)GI:4376159 from [Arabidopsis thaliana] Landsberg-erecta; one amino acid difference 1 4 3 25 At1g31160 "zinc-binding protein, putative / protein kinase C inhibitor, putative similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor, PKCI) [Zea mays] Swiss-Prot:P42856" 1 4 4 1 At1g31200 expressed protein 1 4 4 2 At1g31380 hypothetical protein 1 4 4 3 At1g31440 SH3 domain-containing protein 1 (SH3P1) nearly identical to SH3 domain-containing protein 1 [Arabidopsis thaliana] GI:16974676; contains Pfam profile PF00018: SH3 domain 1 4 4 4 At1g31650 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 1 4 4 5 At1g31720 expressed protein 1 4 4 6 At1g34770 MAGE-8 antigen-related contains weak similarity to Swiss-Prot:P43361 melanoma-associated antigen 8 (MAGE-8 antigen) [Homo sapiens] 1 4 4 7 At1g35030 hypothetical protein 1 4 4 8 At1g35260 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 1 4 4 9 At1g35340 ATP-dependent protease La (LON) domain-containing protein contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 1 4 4 10 At1g35540 "transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02362 B3 DNA binding domain, PF02309: AUX/IAA family" 1 4 4 11 At1g35614 hypothetical protein 1 4 4 12 At1g35830 VQ motif-containing protein contains PF05678: VQ motif 1 4 4 13 At1g35910 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 1 4 4 14 At1g47485 expressed protein 1 4 4 15 At1g47530 "ripening-responsive protein, putative similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family" 1 4 4 16 At1g47710 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 1 4 4 17 At1g47765 F-box family protein contains F-box domain Pfam:PF00646 1 4 4 18 At1g47915 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 1 4 4 19 At1g47990 "gibberellin 2-oxidase, putative / GA2-oxidase, putative similar to GA2ox1 [GI:4678366]; similar to dioxygenase GB:CAA70330 GI:1666096 from [Marah macrocarpus]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 1 4 4 20 At1g48145 hypothetical protein 1 4 4 21 At1g48190 hypothetical protein 1 4 4 22 At1g51260 "acyl-CoA:1-acylglycerol-3-phosphate acyltransferase, putative similar to acyl-CoA:1-acylglycerol-3-phosphate acyltransferase GI:4583544 from [Brassica napus]" 1 4 4 23 At1g51320 F-box family protein (FBX11) contains F-box domain PF:00646 1 4 4 24 At1g51460 "ABC transporter family protein similar to SP|Q9UNQ0 ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) {Homo sapiens}; contains Pfam profile PF00005: ABC transporter" 1 4 4 25 At1g51520 "expressed protein contains a weak hit to PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 1 4 5 1 At1g51660 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK4) identical to MAP kinase kinase 4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830 gi_13265419" 1 4 5 2 At1g51690 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to 55 kDa B regulatory subunit of phosphatase 2A (GI:710330) [Arabidopsis thaliana]; similar to type 2A protein serine/threonine phosphatase 55 kDa B regulatory GI:1408460 [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 1 4 5 3 At1g51850 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376" 1 4 5 4 At1g51910 "protein kinase family protein contains Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 1 4 5 5 At1g54530 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 4 5 6 At1g54580 "acyl carrier protein, chloroplast, putative / ACP, putative strong similarity to SP|P25701 Acyl carrier protein 2, chloroplast precursor (ACP) {Arabidopsis thaliana}; contains InterPro accession IPR003881: Isochorismatase" 1 4 5 7 At1g54770 expressed protein 1 4 5 8 At1g54830 "CCAAT-box binding transcription factor Hap5a, putative similar to heme activated protein GI:6289057 from (Arabidopsis thaliana) GI:14577940 CCAAT-binding protein subunit HAP5 {Hypocrea jecorina} similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 1 4 5 9 At1g54970 proline-rich family protein similar to proline-rich protein GI:170048 from [Glycine max] 1 4 5 10 At1g55030 F-box family protein contains F-box domain Pfam:PF00646 1 4 5 11 At1g55220 hypothetical protein 1 4 5 12 At1g55265 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 1 4 5 13 At1g59730 "thioredoxin, putative similar to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana}; contains Pfam profile: PF00085 Thioredoxin" 1 4 5 14 At1g59790 cullin-related low similarity to Hs-CUL-1 [Homo sapiens] GI:1381142 1 4 5 15 At1g59910 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128" 1 4 5 16 At1g59970 matrixin family protein similar to SP|P29136 Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) {Glycine max}; contains InterPro accession IPR001818: Matrixin 1 4 5 17 At1g60160 "potassium transporter family protein similar to potassium transporter HAK2p [Mesembryanthemum crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family member, PMID:11500563; contains Pfam profile PF02705: K+ potassium transporter" 1 4 5 18 At1g60230 radical SAM domain-containing protein contains Pfam profile PF04055: radical SAM domain protein 1 4 5 19 At1g60460 hypothetical protein 1 4 5 20 At1g60550 "naphthoate synthase, putative / dihydroxynaphthoic acid synthetase, putative / DHNA synthetase, putative contains similarity to MENB from Escherichia coli [SP|P27290], Bacillus subtilis [SP|P23966]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein" 1 4 5 21 At1g63350 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 4 5 22 At1g63410 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567); expression supported by MPSS 1 4 5 23 At1g63600 protein kinase-related low similarity to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam profile: PF01657 Domain of unknown function DUF26 1 4 5 24 At1g63640 kinesin motor protein-related C-terminal region is similar to C-term region of kinesin motor protein GB:AAB51397 (Mus musculus); contains Pfam profile: PF00225 Kinesin motor domain 1 4 5 25 At1g63770 peptidase M1 family protein similar to SP|P04825 Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) {Escherichia coli}; contains Pfam profile PF01433: Peptidase family M1 1 4 6 1 At1g63830 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains 1 predicted transmembrane domain" 1 4 6 2 At1g63970 "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GI:7621712 from [Catharanthus roseus]" 1 4 6 3 At1g64020 serpin-related / serine protease inhibitor-related similar to phloem serpin-1 [Cucurbita maxima] GI:9937311 1 4 6 4 At1g66820 glycine-rich protein 1 4 6 5 At1g66880 "serine/threonine protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 1 4 6 6 At1g67040 expressed protein ; expression supported by MPSS 1 4 6 7 At1g67090 "ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) identical to SP|P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) {Arabidopsis thaliana}" 1 4 6 8 At1g67280 "lactoylglutathione lyase, putative / glyoxalase I, putative similar to putative lactoylglutathione lyase SP:Q39366, GI:2494843 from [Brassica oleracea]" 1 4 6 9 At1g67320 "DNA primase, large subunit family contains Pfam profile PF04104: Eukaryotic-type DNA primase, large subunit; similar to DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58) (Swiss-Prot:P49643) [Homo sapiens]" 1 4 6 10 At1g67490 "alpha-glucosidase I (GCS1) / KNOPF (KNF) identical to alpha-glucosidase I (GI:16506680, GI:13398928) [Arabidopsis thaliana]" 1 4 6 11 At1g67550 "urease, putative / urea amidohydrolase, putative similar to SP|P07374 Urease (EC 3.5.1.5) (Urea amidohydrolase) {Canavalia ensiformis}; contains Pfam profile PF01979: Amidohydrolase family" 1 4 6 12 At1g70180 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 1 4 6 13 At1g70230 expressed protein 1 4 6 14 At1g70410 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 1 4 6 15 At1g70460 "protein kinase, putative contains Pfam PF00069: Protein kinase domain" 1 4 6 16 At1g70580 "glutamate:glyoxylate aminotransferase 2 (GGT2) identical to glutamate:glyoxylate aminotransferase 2 [Arabidopsis thaliana] GI:24461829; similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GI:4730884 from Oryza sativa; contains Pfam profile PF00155: aminotransferase, classes I and II" 1 4 6 17 At1g70630 expressed protein 1 4 6 18 At1g70790 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 1 4 6 19 At1g70830 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 1 4 6 20 At1g73660 protein kinase family protein contains Pfam profile: PF00069 eukaryotic protein kinase domain 1 4 6 21 At1g73720 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to Will die slowly protein (SP:Q9V3J8)[Drosophila melanogaster] 1 4 6 22 At1g73880 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 4 6 23 At1g73940 expressed protein 1 4 6 24 At1g74090 sulfotransferase family protein similar to SP|P52837 Flavonol 4'-sulfotransferase (EC 2.8.2.-) (F4-ST) {Flaveria chloraefolia}; contains Pfam profile PF00685: Sulfotransferase domain 1 4 6 25 At1g74150 "kelch repeat-containing protein low similarity to rngB protein, Dictyostelium discoideum, PIR:S68824; contains Pfam profile PF01344: Kelch motif" 1 4 7 1 At1g74325 expressed protein ; expression supported by MPSS 1 4 7 2 At1g74380 "galactosyl transferase GMA12/MNN10 family protein very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 1 4 7 3 AT5G57480 PC-1 D12 1 4 7 4 3XSSC PC-1 D24 1 4 7 5 AT1G29930 PC-1 H12 1 4 7 6 3XSSC PC-1 H24 1 4 7 7 AT3G44150 PC-1 L12 1 4 7 8 3XSSC PC-1 L24 1 4 7 9 AT4G00810 PC-1 P12 1 4 7 10 3XSSC PC-1 P24 1 4 7 11 At1g77140 "vacuolar protein sorting protein 45, putative / VPS45p, putative identical to vacuolar protein sorting homolog VPS45p [Arabidopsis thaliana] gi|2921406|gb|AAC39472" 1 4 7 12 At1g77200 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY (GI:1246403) [Arabidopsis thaliana] similar to TINY (GP:1246403) [Arabidopsis thaliana] similar to TINY (GP:1246403) [Arabidopsis thaliana]" 1 4 7 13 At1g77380 "amino acid carrier, putative / amino acid permease, putative strong similarity to amino acid carrier GI:3293031 from [Ricinus communis]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein; identical to cDNA AAP3 (Amino Acid Permease) GI:3970651" 1 4 7 14 At1g77440 20S proteasome beta subunit C (PBC2) identical to residues 14-204 of 20S proteasome beta subunit PBC2 GB:AAC32069 [Arabidopsis thaliana] 1 4 7 15 At1g77610 "glucose-6-phosphate/phosphate translocator-related similar to glucose-6-phosphate/phosphate-translocators from [Mesembryanthemum crystallinum] GI:9295277, [Solanum tuberosum] GI:2997593, [Pisum sativum] GI:2997591; contains Pfam profile PF00892: Integral membrane protein" 1 4 7 16 At1g77660 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related low similarity to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profile PF02493: MORN repeat 1 4 7 17 At1g77810 galactosyltransferase family protein contains Pfam profile PF01762: Galactosyltransferase 1 4 7 18 At1g77850 transcriptional factor B3 family protein similar to auxin response factor 10 GI:6165644 from [Arabidopsis thaliana]; contains Pfam profile PF02362: B3 DNA binding domain 1 4 7 19 At1g80420 "DNA repair protein, putative (XRCC1) identical to putative DNA repair protein XRCC1 [Arabidopsis thaliana] GI:11181954; contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain" 1 4 7 20 At1g80470 F-box family protein contains F-box domain Pfam:PF00646 1 4 7 21 At1g80650 double-stranded RNA-binding domain (DsRBD)-containing protein contains Pfam profile PF00035: Double-stranded RNA binding motif 1 4 7 22 At1g80710 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to damage-specific DNA-binding protein 2 (DDB2) [Mus musculus] 1 4 7 23 At1g80865 expressed protein 1 4 7 24 At1g80920 "DNAJ heat shock N-terminal domain-containing protein similar to SP|Q05646 Chaperone protein dnaJ Erysipelothrix rhusiopathiae, SP|P45555 Chaperone protein dnaJ (HSP40) Staphylococcus aureus; contains Pfam profile PF00226 DnaJ domain" 1 4 7 25 At2g01100 expressed protein 1 4 8 1 At2g01150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 8 2 At2g04063 glycine-rich protein 1 4 8 3 At2g04135 hypothetical protein 1 4 8 4 At2g04370 hypothetical protein 1 4 8 5 At2g04420 expressed protein 1 4 8 6 At2g04580 hypothetical protein 1 4 8 7 At2g04675 expressed protein 1 4 8 8 At2g04865 expressed protein ; expression supported by MPSS 1 4 8 9 At2g04920 "F-box family protein (FBX9) identical to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains F-box domain PF:00646; contains TIGRFAM TIGR01640 : F-box protein interaction domain" 1 4 8 10 At2g12170 expressed protein 1 4 8 11 At2g12345 hypothetical protein 1 4 8 12 At2g13070 hypothetical protein 1 4 8 13 At2g13290 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 1 4 8 14 At2g13620 "cation/hydrogen exchanger, putative (CHX15) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 1 4 8 15 At2g13660 expressed protein 1 4 8 16 At2g13975 Expressed protein 1 4 8 17 At2g14045 expressed protein 1 4 8 18 At2g17260 "glutamate receptor family protein (GLR3.1) (GLR2) identical to putative glutamate receptor GLR2 [Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant glutamate receptor family, PMID:11379626" 1 4 8 19 At2g17305 hypothetical protein 1 4 8 20 At2g17520 "protein kinase family protein / Ire1 homolog-2 (IRE1-2) contains protein kinase domain, Pfam:PF00069; identical to Ire1 homolog-2 [Arabidopsis thaliana] GI:15277139, cDNA Ire1 homolog-2 GI:15277138" 1 4 8 21 At2g17570 undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein contains putative undecaprenyl diphosphate synthase domain [PF01255]; similar to dehydrodolichyl diphosphate synthetase (DEDOL-PP synthase) [GI:796076] and S. cerevisiae Rer2 [SP|P35196] 1 4 8 22 At2g17730 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger) domain; similar to RING-H2 finger protein RHA3a (GI:3790573) [Arabidopsis thaliana]; similar to ReMembR-H2 protein JR700 (GI:6942147) [Arabidopsis thaliana]" 1 4 8 23 At2g17785 zinc-binding protein-related similar to zinc-binding protein [Pisum sativum] GI:16117799 1 4 8 24 At2g17960 hypothetical protein 1 4 8 25 At2g18000 YEATS family protein contains Pfam domain PF03366: YEATS family 1 4 9 1 At2g20725 CAAX amino terminal protease family protein contains Pfam profile PF02517 CAAX amino terminal protease family protein 1 4 9 2 At2g20770 "lanthionine synthetase C-like family protein contains Pfam domain, PF05147: Lanthionine synthetase C-like protein" 1 4 9 3 At2g20870 "cell wall protein precursor, putative identical to Putative cell wall protein precursor (Swiss-Prot:P47925) [Arabidopsis thaliana]; weak similarity to mu-protocadherin (GI:7861967) [Rattus norvegicus]" 1 4 9 4 At2g20920 expressed protein 1 4 9 5 At2g21080 expressed protein 1 4 9 6 At2g21140 hydroxyproline-rich glycoprotein family protein identical to proline-rich protein 2 [Arabidopsis thaliana] gi|7620011|gb|AAF64549 1 4 9 7 At2g21250 "mannose 6-phosphate reductase (NADPH-dependent), putative 6-phosphate reductase [Apium graveolens][GI:1835701], NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Malus domestica][SP|P28475]" 1 4 9 8 At2g21320 zinc finger (B-box type) family protein 1 4 9 9 At2g24200 "cytosol aminopeptidase identical to cytosol aminopeptidase SP:P30184 from [Arabidopsis thaliana]; contains Pfam profiles: PF00883 cytosol aminopeptidase family catalytic domain, PF02789: cytosol aminopeptidase family N-terminal domain" 1 4 9 10 At2g24255 hypothetical protein 1 4 9 11 At2g24420 DNA repair ATPase-related contains 2 transmembrane domains; similar to DNA double-strand break repair rad50 ATPase. (Swiss-Prot:O33600) [Sulfolobus acidocaldarius] 1 4 9 12 At2g24480 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger protein RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 9 13 At2g24640 "ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to ubiquitin-specific protease 15 (UBP15) [Arabidopsis thaliana] GI:11993475; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF01753: MYND finger" 1 4 9 14 At2g24700 "transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 1 4 9 15 At2g24900 "hypothetical protein includes At2g24900, At5g35040, At3g30500, At4g07690" 1 4 9 16 At2g24950 hypothetical protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 1 4 9 17 At2g27660 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 9 18 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 1 4 9 19 At2g27830 expressed protein 1 4 9 20 At2g27900 expressed protein 1 4 9 21 At2g28070 ABC transporter family protein 1 4 9 22 At2g28110 exostosin family protein contains 1 transmembrane domain; similar to pectin-glucuronyltransferase (GI:23821292) [Nicotiana plumbaginifolia]; similar to NpGUT1 homolog (GI:23821294) [Arabidopsis thaliana]; contains Pfam profile PF03016: Exostosin family 1 4 9 23 At2g28290 "chromatin remodeling protein, putative (SYD) similar to transcriptional activator HBRM [Homo sapiens] GI:414117; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; identical to cDNA putative chromatin remodeling protein SYD (SPLAYED) GI:13603720" 1 4 9 24 At2g28320 "pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein contains Pfam profiles PF01852: START domain, PF00169: PH domain" 1 4 9 25 At2g31060 "elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain, PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2" 1 4 10 1 At2g31090 expressed protein 1 4 10 2 At2g31260 autophagy 9 (APG9) identical to autophagy 9 protein GI:19912149 from [Arabidopsis thaliana] 1 4 10 3 At2g31310 LOB domain protein 14 / lateral organ boundaries domain protein 14 (LBD14) identical to SP|Q9SJW5| LOB domain protein 14 {Arabidopsis thaliana} 1 4 10 4 At2g31460 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 1 4 10 5 At2g31530 secY family protein low similarity to SP|P31159 Preprotein translocase secY subunit {Synechococcus sp}; contains Pfam profile PF00344: eubacterial secY protein 1 4 10 6 At2g31690 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 1 4 10 7 At2g31740 expressed protein 1 4 10 8 At2g34310 expressed protein 1 4 10 9 At2g34355 nodulin-related contains 14 transmembrane domains; supported by tandem duplication of nodulin -related protein (TIGR_Ath1:At2g34350) [Arabidopsis thaliana] 1 4 10 10 At2g34480 60S ribosomal protein L18A (RPL18aB) 1 4 10 11 At2g34530 expressed protein 1 4 10 12 At2g34680 "leucine-rich repeat family protein contains leucine rich repeat (LRR) domains, Pfam:PF00560; identical to cDNA hypothetical protein (AIR9) mRNA, partial cds GI:3695020" 1 4 10 13 At2g34740 "protein phosphatase 2C, putative / PP2C, putative contains PF00481: Protein phosphatase 2C domain; similar to protein phosphatase type 2C (GI:4336436) [Lotus japonicus]" 1 4 10 14 At2g34920 ubiquitin-protein ligase-related contains weak similarity to Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Swiss-Prot:P23804) [Mus musculus] 1 4 10 15 At2g34990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 10 16 At2g37560 origin recognition complex subunit 2 (ORC2) identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from [Arabidopsis thaliana] 1 4 10 17 At2g37600 60S ribosomal protein L36 (RPL36A) 1 4 10 18 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 1 4 10 19 At2g37810 "CHP-rich zinc finger protein, putative " 1 4 10 20 At2g37975 expressed protein 1 4 10 21 At2g38025 expressed protein 1 4 10 22 At2g38185 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 10 23 At2g38230 "stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963; contains Pfam domain, PF01680: SOR/SNZ family" 1 4 10 24 At2g40780 hypothetical protein 1 4 10 25 At2g40830 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 11 1 At2g40950 bZIP transcription factor family protein similar to AtbZIP transcription factor GI:17065880 from [Arabidopsis thaliana]; contains Pfam profile: bZIP transcription factor PF00170 1 4 11 2 At2g41000 DNAJ heat shock N-terminal domain-containing protein similar to SP|O75190 DnaJ homolog subfamily B member 6 (Heat shock protein J2) Homo sapiens; contains Pfam profile PF00226 DnaJ domain 1 4 11 3 At2g41160 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 1 4 11 4 At2g41220 "glutamate synthase, chloroplast (GLU2) / ferredoxin-dependent glutamate synthase (Fd-GOGAT 2) identical to SP|Q9T0P4 Ferredoxin-dependent glutamate synthase 2, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT 2) {Arabidopsis thaliana}" 1 4 11 5 At2g41400 expressed protein 1 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 1 4 11 7 At2g44000 expressed protein 1 4 11 8 At2g44060 late embryogenesis abundant family protein / LEA family protein similar to ethylene-responsive late embryogenesis-like protein [Lycopersicon esculentum] GI:1684830; contains Pfam profile PF03168: Late embryogenesis abundant protein 1 4 11 9 At2g44190 expressed protein contains Pfam profile: PF04484 family of unknown function (DUF566) 1 4 11 10 At2g44240 expressed protein contains Pfam profile PF03080: Arabidopsis proteins of unknown function 1 4 11 11 At2g44420 protein N-terminal asparagine amidohydrolase family protein similar to Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-) (Protein NH2-terminal asparagine deamidase) (NTN-amidase) (PNAD) (Protein NH2- terminal asparagine amidohydrolase) (PNAA) (Swiss-Prot:Q64311) [Mus musculus] 1 4 11 12 At2g44480 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to amygdalin hydrolase isoform AH I precursor (GI:16757966) [Prunus serotina] 1 4 11 13 At2g44620 "acyl carrier protein, mitochondrial / ACP / NADH-ubiquinone oxidoreductase 9.6 kDa subunit identical to SP|P53665 Acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (MtACP-1) {Arabidopsis thaliana}; identical to cDNA acyl carrier protein precursor GI:468265" 1 4 11 14 At2g44680 "casein kinase II beta chain, putative similar to casein kinase II beta-3 chain (CK II) [Arabidopsis thaliana] SWISS-PROT:O81275" 1 4 11 15 At2g47350 "PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam domains, PF04795: PAPA-1-like conserved region and PF04438: HIT zinc finger" 1 4 11 16 At2g47410 "transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to WDR protein, form B (GI:14970593) [Mus musculus]" 1 4 11 17 At2g47560 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 11 18 At2g47620 "SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain" 1 4 11 19 At2g47790 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens]; The first 3 exons are identical to that of GB:AJ224957. This gene appears to be a truncated version of that in GB:AJ224957; contains 4 WD-40 repeats (PF00400) 1 4 11 20 At2g47830 "cation efflux family protein / metal tolerance protein, putative (MTPc1) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 1 4 11 21 At2g47970 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 1 4 11 22 At2g48010 serine/threonine protein kinase (RFK3) identical to receptor-like serine/threonine kinase [Arabidopsis thaliana] gi|2465927|gb|AAC50045 1 4 11 23 At3g03340 LUC7 N_terminus domain-containing protein contains Pfam domain PF03194: LUC7 N_terminus 1 4 11 24 At3g03405 hypothetical protein temporary automated functional assignment 1 4 11 25 At3g03580 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 4 12 1 At3g03640 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to beta-glucosidase GB:AAC31962 [Arabidopsis thaliana]; similar to thioglucoside glucohydrolase (GI:984052) [Arabidopsis thaliana] 1 4 12 2 At3g03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein similar to hect domain and RLD 2 GB:NP_004658 [Homo sapiens]; contains Pfam PF00415: Regulator of chromosome condensation (RCC1); contains Pfam PF00023: Ankyrin repeat; similar to rjs (GI:3414809) [Mus musculus]; similar to HERC2 (GI:4079809) [Homo sapiens] 1 4 12 3 At3g03847 auxin-responsive family protein similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus] 1 4 12 4 At3g03970 expressed protein 1 4 12 5 At3g04020 expressed protein 1 4 12 6 At3g06547 expressed protein 1 4 12 7 At3g06590 expressed protein 1 4 12 8 At3g06680 60S ribosomal protein L29 (RPL29B) similar to 60S ribosomal protein L29 GB:P25886 from (Rattus norvegicus) 1 4 12 9 At3g06730 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin 1 4 12 10 At3g06920 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 1 4 12 11 At3g06960 expressed protein 1 4 12 12 At3g07130 serine/threonine protein phosphatase family protein contains similarity to purple acid phosphatase [Arabidopsis thaliana] gi|20257489|gb|AAM15914 1 4 12 13 At3g07180 "GPI transamidase component PIG-S-related similar to GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis, class S protein) (Swiss-Prot:Q96S52) [Homo sapiens]" 1 4 12 14 At3g10220 tubulin folding cofactor B identical to tubulin folding cofactor B GI:20514259 from [Arabidopsis thaliana]; identical to cDNA tubulin folding cofactor B GI:20514258 1 4 12 15 At3g10260 reticulon family protein weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon; identical to cDNA GI:32331854 1 4 12 16 At3g10405 expressed protein 1 4 12 17 At3g10450 serine carboxypeptidase S10 family protein similar to glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; also similar to serine carboxypeptidase I GB:P37890 [Oryza sativa] 1 4 12 18 At3g10580 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain; similar to transcription factor MYBS1 (GI:24850303) [Oryza sativa (japonica cultivar-group)]; similar to I-box binding factor (GI:6688529) [Lycopersicon esculentum] 1 4 12 19 At3g10620 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus angustifolius] GI:1888557, [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 1 4 12 20 At3g10760 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 1 4 12 21 At3g10800 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor; contains similarity to TGACG-sequence specific DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana tabacum] 1 4 12 22 At3g13227 serine-rich protein-related contains some similarity to serine-rich proteins 1 4 12 23 At3g13235 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 4 12 24 At3g13400 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 1 4 12 25 At3g13445 transcription initiation factor IID-1 (TFIID-1) / TATA-box factor 1 / TATA sequence-binding protein 1 (TBP1) identical to Swiss-Prot:P28147 transcription initiation factor TFIID-1 (TATA-box factor 1)(TATA sequence-binding protein 1) (TBP-1) [Arabidopsis thaliana] 1 4 13 1 At3g13600 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif 1 4 13 2 At3g13660 disease resistance response protein-related/ dirigent protein-related similar to dirigent protein [Forsythia x intermedia] gi|6694695|gb|AAF25358; similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 4 13 3 At3g13770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 13 4 At3g13800 metallo-beta-lactamase family protein similar to Metal Dependent Hydrolase GB:AAD18619 from [Chlamydophila pneumoniae] 1 4 13 5 At3g16300 "integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588); At2g38480, At1g45222 and others share this domain structure; distantly related to GP|14030504 salicylic acid-induced fragment 1 protein {Gossypium hirsutum}" 1 4 13 6 At3g16360 "phosphotransfer family protein similar to two-component phosphorelay mediators ATHP1 (GI:4156241), ATHP3 (GI:4156245) [Arabidopsis thaliana], histidine-containing phosphotransfer protein [Catharanthus roseus] GI:13774348" 1 4 13 7 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 4 13 8 At3g16560 protein phosphatase 2C-related / PP2C-related contains protein phosphatase 2C domain 1 4 13 9 At3g16730 expressed protein ; expression supported by MPSS 1 4 13 10 At3g16770 AP2 domain-containing protein RAP2.3 (RAP2.3) identical to GI:2281631 [Arabidopsis thaliana]; identical to cDNA EBP GI:2190330 1 4 13 11 At3g16920 glycoside hydrolase family 19 protein similar to class I chitinase GI:7798670 from [Arabis microphylla] 1 4 13 12 At3g16980 "DNA-directed RNA polymerase II, putative similar to SP|P36958 DNA-directed RNA polymerase II 15.1 kDa polypeptide (EC 2.7.7.6) {Drosophila melanogaster}; contains Pfam profile PF02150: RNA polymerases M/15 Kd subunit" 1 4 13 13 At3g19590 "WD-40 repeat family protein / mitotic checkpoint protein, putative contains 5 WD-40 repeats (PF00400) (1 weak); similar to testis mitotic checkpoint protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]" 1 4 13 14 At3g19650 cyclin-related contains weak similarity to Cylicin I (Multiple-band polypeptide I) (Swiss-Prot:P35662) [Bos taurus] 1 4 13 15 At3g19830 C2 domain-containing protein low similarity to GLUT4 vesicle protein [Rattus norvegicus] GI:4193489; contains Pfam profile PF00168: C2 domain 1 4 13 16 At3g19890 F-box family protein contains F-box domain Pfam:PF00646 1 4 13 17 At3g20050 "T-complex protein 1 alpha subunit / TCP-1-alpha / chaperonin (CCT1) identical to SWISS-PROT:P28769- T-complex protein 1, alpha subunit (TCP-1-alpha) [Arabidopsis thaliana]" 1 4 13 18 At3g20080 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 1 4 13 19 At3g20250 "pumilio/Puf RNA-binding domain-containing protein contains Pfam profile: PF00806 Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (8 copies at C-terminus)" 1 4 13 20 At3g20280 PHD finger family protein contains Pfam profile: PF00628 PHD-finger 1 4 13 21 At3g23020 pentatricopeptide (PPR) repeat-containing protein low similarity to leaf protein [Ipomoea nil] GI:3107905; contains Pfam profile PF01535: PPR repeat 1 4 13 22 At3g23060 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 13 23 At3g23220 "ethylene-responsive element-binding protein, putative similar to SP:O80337,ERFI_ARATH Ethylene responsive element binding factor 1 (AtERF1). {Arabidopsis thaliana}; similar to SP:O04681, PTI5_LYCES Pathogenesis-related genes transcriptional activator PTI5. [Tomato] {Lycopersicon esculentum} >GP|2213783|U89256; similar to EREBP-2 GB:BAA07324 from [Nicotiana tabacum]" 1 4 13 24 At3g23270 regulator of chromosome condensation (RCC1) family protein contains Pfam domain PF00415: Regulator of chromosome condensation (RCC1); similar to zinc finger protein (GI:15811367) [Arabidopsis thaliana]; similar to chromosome condensation regulator protein (GI:22770461) [Cicer arietinum] 1 4 13 25 At3g23420 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 14 1 At3g23490 cyanate lyase family contains Pfam profile: PF02560 cyanate lyase C-terminal domain 1 4 14 2 At3g23680 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 14 3 At3g23730 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase-related protein GI:1244760 from [Arabidopsis thaliana]" 1 4 14 4 At3g26550 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 14 5 At3g26610 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase (PG1) GI:5669846, (PG2) GI:5669848 [Glycine max]; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 1 4 14 6 At3g26710 expressed protein 1 4 14 7 At3g26760 short-chain dehydrogenase/reductase (SDR) family protein similar to sex determination protein tasselseed 2 SP:P50160 from [Zea mays] 1 4 14 8 At3g26900 shikimate kinase family protein similar to shikimate kinase precursor GB:CAA45121 [Lycopersicon esculentum]; contains Pfam shikimate kinase domain PF01202 1 4 14 9 At3g26940 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 14 10 At3g27120 "spastin ATPase, putative similar to SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus]; contains Pfam domain, PF00004: ATPase, AAA family" 1 4 14 11 At3g27180 expressed protein 1 4 14 12 At3g30290 "cytochrome P450 family protein similar to Cytochrome P450 85 (SP:Q43147) {Lycopersicon esculentum}; similar to GB:C71417 from [Arabidopsis thaliana] (Nature 391 (6666), 485-488 (1998))" 1 4 14 13 At3g30360 hypothetical protein 1 4 14 14 At3g30560 hypothetical protein 1 4 14 15 At3g30645 hypothetical protein 1 4 14 16 At3g30820 hypothetical protein 1 4 14 17 At3g30848 hypothetical protein contains similarity to hypothetical proteins 1 4 14 18 At3g31950 hypothetical protein 1 4 14 19 At3g32040 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative identical to gi:413730; similar to GB:P34802 from [Arabidopsis thaliana] (Plant Physiol. 104 (4), 1469-1470 (1994))" 1 4 14 20 At3g44805 hypothetical protein 1 4 14 21 At3g44860 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 1 4 14 22 At3g45030 "40S ribosomal protein S20 (RPS20A) 40S ribsomomal proteinS20, Arabidopsis thaliana, pir:T12992" 1 4 14 23 At3g45080 "sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain" 1 4 14 24 At3g45240 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 1 4 14 25 At3g45320 hypothetical protein 1 4 15 1 At3g45500 hypothetical protein 1 4 15 2 At3g45560 "zinc finger (C3HC4-type RING finger) family protein contains Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 1 4 15 3 At3g48380 expressed protein 1 4 15 4 At3g48430 "zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein contains Pfam domains PF02375: jmjN domain, PF02373: jmjC domain and PF00096: Zinc finger, C2H2 type" 1 4 15 5 At3g48610 phosphoesterase family protein low similarity to SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam profile PF04185: Phosphoesterase family 1 4 15 6 At3g48675 hypothetical protein 1 4 15 7 At3g48850 "mitochondrial phosphate transporter, putative similar to mitochondrial phosphate transporter GI:3318617 from [Arabidopsis thaliana]" 1 4 15 8 At3g48890 cytochrome b5 domain-containing protein similar to SP|O00264 Membrane associated progesterone receptor component (mPR) {Homo sapiens}; contains Pfam profile PF00173: Heme/Steroid binding domain 1 4 15 9 At3g49055 hypothetical protein 1 4 15 10 At3g49120 "peroxidase, putative identical to peroxidase [Arabidopsis thaliana] gi|405611|emb|CAA50677" 1 4 15 11 At3g51960 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 1 4 15 12 At3g52000 serine carboxypeptidase S10 family protein similar to SP|P52711 Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam profile PF0450 serine carboxypeptidase 1 4 15 13 At3g52120 "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein contains Pfam profiles PF01585: G-patch domain, PF01805: Surp module" 1 4 15 14 At3g52170 expressed protein 1 4 15 15 At3g52330 "F-box family protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX8 (GI:20197464) [Arabidopsis thaliana]" 1 4 15 16 At3g52380 "33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to chloroplast RNA-binding protein (cp33) GB:BAA06523 (Arabidopsis thaliana) (Plant Mol. Biol. 27 (3), 529-539 (1995)); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 4 15 17 At3g52550 hypothetical protein 1 4 15 18 At3g52590 "ubiquitin extension protein 1 (UBQ1) / 60S ribosomal protein L40 (RPL40B) identical to GI:166929, GI:166930" 1 4 15 19 At3g55120 chalcone-flavanone isomerase / chalcone isomerase (CHI) identical to SP|P41088 1 4 15 20 At3g55160 expressed protein 1 4 15 21 At3g55360 "3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to synaptic glycoprotein SC2 spliced variant from Homo sapiens [EMBL:AF038958], SC2 from Rattus sp. [gi:256994]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544" 1 4 15 22 At3g55400 methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) identical to methionyl-tRNA synthetase MEtRS [Arabidopsis thaliana] GI:2266985 1 4 15 23 At3g55590 "GDP-mannose pyrophosphorylase, putative strong similarity to GDP-mannose pyrophosphorylase from Arabidopsis thaliana [GI:3598958], Pichia angusta [GI:7331158]; contains Pfam profile PF00483 Nucleotidyl transferase" 1 4 15 24 At3g55640 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 15 25 At3g55800 "sedoheptulose-1,7-bisphosphatase, chloroplast / sedoheptulose-bisphosphatase identical to SP|P46283 Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE) {Arabidopsis thaliana}" 1 4 16 1 At3g55850 amidohydrolase family protein weak similarity to SP|Q06555 Exoenzymes regulatory protein aepA precursor {Erwinia carotovora}; contains Pfam profile PF01979: Amidohydrolase family 1 4 16 2 At3g58720 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 16 3 At3g58780 agamous-like MADS box protein AGL1 / shatterproof 1 (AGL1) (SHP1) identical to SP|P29381 Agamous-like MADS box protein AGL1 (Protein Shatterproof 1) {Arabidopsis thaliana} 1 4 16 4 At3g58960 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 5 At3g59020 importin beta-2 subunit family protein similar to D-Importin 7/RanBP7 [Drosophila melanogaster] GI:7542336; contains Pfam profile PF03810: Importin-beta N-terminal domain 1 4 16 6 At3g59170 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 7 At3g59230 F-box family protein contains F-box domain Pfam:PF00646 1 4 16 8 At3g59370 "expressed protein hypothetical protein F12F1.4 - Arabidopsis thaliana, EMBL:AC002131" 1 4 16 9 At3g59410 "protein kinase family protein low similarity to GCN2 eIF2alpha kinase [Mus musculus] GI:6066585; contains Pfam profiles PF03129: Anticodon binding domain, PF00069: Protein kinase domain" 1 4 16 10 At3g62100 "auxin-responsive protein, putative similar to SP|O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana}; contains Pfam profile: PF02309: AUX/IAA family" 1 4 16 11 At3g62160 "transferase family protein low similarity to Taxus cuspidata transferases: 10-deacetylbaccatin III-10-O-acetyl transferase GI:6746554, taxadienol acetyl transferase GI:6978038, 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase GI:11559716; contains Pfam profile PF02458 transferase family" 1 4 16 12 At3g62340 WRKY family transcription factor 1 4 16 13 At3g62400 "expressed protein cytochrome c oxidase subunit 5c - Oryza sativa, EMBL:AB027123" 1 4 16 14 At3g62570 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 1 4 16 15 At3g62630 expressed protein 1 4 16 16 At3g62770 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); putative proteins - different species 1 4 16 17 At3g62830 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains non-consensus CA donor splice site at exon 1 and TA acceptor splice site at exon 2 1 4 16 18 At4g01690 protoporphyrinogen oxidase (PPOX) identical to SP|P55826 1 4 16 19 At4g01740 "DC1 domain-containing protein similar to T15B16.6 similar to A. thaliana CHP-rich hypothetical proteins encoded by T10M13, GenBank accession number AF001308" 1 4 16 20 At4g01900 P II nitrogen sensing protein (GLB I) identical to P II nitrogen sensing protein GLB I (GI:7268574) [Arabidopsis thaliana]; similar to nitrogen regulatory protein P-II (PII signal transducing protein) (SP:O30794) {Nostoc punctiforme} 1 4 16 21 At4g01930 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 16 22 At4g02075 "zinc finger (C3HC4-type RING finger) family protein contains InterPro Entry IPR001841 Zn-finger, RING" 1 4 16 23 At4g02130 "glycosyl transferase family 8 protein low similarity to lgtC of Neisseria sp., GenBank accession number U14554, U65788; contains Pfam glycosyl transferase family 8 domain PF01501" 1 4 16 24 At4g02270 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 1 4 16 25 At4g02330 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 1 4 17 1 At4g05270 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 1 4 17 2 At4g05320 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 1 4 17 3 At4g05520 "calcium-binding EF hand family protein similar to EH-domain containing protein 1 from {Mus musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9, receptor-mediated endocytosis 1 from [Caenorhabditis elegans] GI:13487775, GI:13487777, GI:13487779; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 1 4 17 4 At4g05570 hypothetical protein 1 4 17 5 At4g06603 expressed protein 1 4 17 6 At4g06728 hypothetical protein 1 4 17 7 At4g07470 hypothetical protein 1 4 17 8 At4g07515 expressed protein 1 4 17 9 At4g10680 transcription factor IIB (TFIIB) family protein contains Pfam profile: PF00382 transcription factor TFIIB repeat 1 4 17 10 At4g10740 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 1 4 17 11 At4g10895 Expressed protein 1 4 17 12 At4g10930 expressed protein 1 4 17 13 At4g11080 high mobility group (HMG1/2) family protein similar to SP|P40618 High mobility group protein HMG2A {Gallus gallus}; contains Pfam profile PF00505: HMG (high mobility group) box 1 4 17 14 At4g11140 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6 - Lycopersicon esculentum, PID:g2213785" 1 4 17 15 At4g11300 expressed protein 1 4 17 16 At4g11360 zinc finger (C3HC4-type RING finger) family protein (RHA1b) identical to RING-H2 finger protein RHA1b [Arabidopsis thaliana] GI:3790567 1 4 17 17 At4g14100 expressed protein 1 4 17 18 At4g14130 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (XTR7) almost identical to xyloglucan endotransglycosylase-related protein XTR7 GI:1244760 from [Arabidopsis thaliana], one amino acid difference" 1 4 17 19 At4g14240 expressed protein contains Pfam profile PF01595: Domain of unknown function 1 4 17 20 At4g14300 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative " 1 4 17 21 At4g14390 ankyrin repeat family protein contains Pfam profile: PF00023 ankyrin repeat 1 4 17 22 At4g14450 expressed protein 1 4 17 23 At4g14605 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 1 4 17 24 At4g14660 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P52433 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RPB7) {Rattus norvegicus}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 1 4 17 25 At4g17020 "transcription factor-related contains weak similarity to Swiss-Prot:Q92759 TFIIH basal transcription factor complex p52 subunit (Basic transcription factor 52 kDa subunit, BTF2-p52, General transcription factor IIH polypeptide 4) [Homo sapiens]" 1 4 18 1 At4g17060 expressed protein 1 4 18 2 At4g17220 expressed protein 1 4 18 3 At4g17270 Mo25 family protein similar to MO25 protein (early mouse development protein family) [Mouse] SWISS-PROT:Q06138 1 4 18 4 At4g17483 palmitoyl protein thioesterase family protein 1 4 18 5 At4g17520 "nuclear RNA-binding protein, putative similar to nuclear RNA binding protein GI:6492264 from [Arabidopsis thaliana]" 1 4 18 6 At4g17660 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 1 4 18 7 At4g17710 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 1 4 18 8 At4g20310 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein weak similarity to SP|O54862 Membrane-bound transcription factor site 2 protease (EC 3.4.24.-) (Sterol-regulatory element-binding proteins intramembrane protease){Cricetulus griseus}; contains Pfam profile PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 1 4 18 9 At4g20370 twin sister of FT protein (TSF) / TFL1 like protein identical to SP|Q9S7R5 TWIN SISTER of FT protein (TFL1 like protein) {Arabidopsis thaliana}; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein 1 4 18 10 At4g20530 "receptor-like protein kinase-related kinase like proteins, Arabidopsis contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069" 1 4 18 11 At4g20710 hypothetical protein 1 4 18 12 At4g20880 ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) identical to ethylene-regulated nuclear protein [Arabidopsis thaliana] gi|2765442|emb|CAA75349 1 4 18 13 At4g20940 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to leucine-rich repeat receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558" 1 4 18 14 At4g21110 G10 family protein contains Pfam profile: PF01125 G10 protein 1 4 18 15 At4g21160 zinc finger and C2 domain protein (ZAC) identical to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 1 4 18 16 At4g23750 "AP2 domain-containing transcription factor, putative DNA-binding protein Pti6 - Lycopersicon esculentum,PID:g2213785" 1 4 18 17 At4g23800 high mobility group (HMG1/2) family protein similar to HMG2B [Homo sapiens] GI:32335; contains Pfam profile PF00505: HMG (high mobility group) box 1 4 18 18 At4g23940 "FtsH protease, putative contains similarity to zinc dependent protease GI:7650138 from [Arabidopsis thaliana]" 1 4 18 19 At4g24000 "cellulose synthase family protein similar to cellulose synthase from Gossypium hirsutum [gi:1706956], cellulose synthase-5 from Zea mays [gi:9622882]" 1 4 18 20 At4g24160 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 1 4 18 21 At4g24210 "F-box family protein / SLEEPY1 protein contains Pfam PF00646: F-box domain; similar to F-box protein Fbx8 (GI:6164735) [Homo sapiens]; identified as SLEEPY1 in McGinnis, et al, Plant Cell (2003) 15: 1120-1130." 1 4 18 22 At4g24330 "expressed protein hypothetical protein - Caenorhabditis elegans,PID:e1350884" 1 4 18 23 At4g24390 F-box family protein (FBX14) similar to transport inhibitor response 1 protein GI:8777429 from [Arabidopsis thaliana] 1 4 18 24 At4g26960 expressed protein 1 4 18 25 At4g27010 expressed protein ; expression supported by MPSS 1 4 19 1 At4g27170 2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4 identical to SP|P15460 1 4 19 2 At4g27250 "dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family similar to dihydrokaempferol 4-reductase, Ipomoea purpurea (GI:4239849), Medicago sativa, PIR2:S61416" 1 4 19 3 At4g27420 "ABC transporter family protein D.melanogaster P element CaSpeR-1 gene (white protein),PID:g870996" 1 4 19 4 At4g27470 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 1 4 19 5 At4g27610 expressed protein 1 4 19 6 At4g27630 expressed protein 1 4 19 7 At4g30250 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 1 4 19 8 At4g30310 "ribitol kinase, putative similar to ribitol kinase [Klebsiella pneumoniae] gi|2905643|gb|AAC26495" 1 4 19 9 At4g30470 "cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Saccharum officinarum [GI:3341511]" 1 4 19 10 At4g30510 transport protein-related weak similarity to Gsa12p [Pichia pastoris] GI:18307769; contains 1 WD-40 repeat (PF00400); similar to several hypothetical proteins 1 4 19 11 At4g30670 expressed protein 1 4 19 12 At4g30720 "expressed protein hypothetical protein - Synechocystis sp. (strain PCC 6803),PIR2:S76076" 1 4 19 13 At4g30850 "expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073)" 1 4 19 14 At4g30900 expressed protein 1 4 19 15 At4g33430 brassinosteroid insensitive 1-associated receptor kinase 1 (BAK1) / somatic embryogenesis receptor-like kinase 3 (SERK3) identical to SP|Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor (EC 2.7.1.37) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) {Arabidopsis thaliana}; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; identical to cDNA somatic embryogenesis receptor-like kinase 3 (SERK3) GI:14573458 1 4 19 16 At4g33490 "nucellin protein, putative similar to nucellin GI:2290202 from [Hordeum vulgare]" 1 4 19 17 At4g33630 expressed protein 1 4 19 18 At4g33670 "L-galactose dehydrogenase (L-GalDH) identical to L-galactose dehydrogenase [Arabidopsis thaliana] GI:16555790; similar to L-fucose dehydrogenase [Pseudomonas sp.] GI:829054; contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family" 1 4 19 19 At4g33850 glycosyl hydrolase family 10 protein similar to tapetum specific protein GI:3885492 from [Zea mays] 1 4 19 20 At4g33890 expressed protein 1 4 19 21 At4g34030 "methylcrotonyl-CoA carboxylase beta chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 2 (MCCB) identical to SP|Q9LDD8 Methylcrotonyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta subunit) {Arabidopsis thaliana}; contains Pfam profile: PF01039 carboxyl transferase domain" 1 4 19 22 At4g34070 expressed protein 1 4 19 23 AT5G57480 PC-1 D12 1 4 19 24 3XSSC PC-1 D24 1 4 19 25 AT1G29930 PC-1 H12 1 4 20 1 3XSSC PC-1 H24 1 4 20 2 AT3G44150 PC-1 L12 1 4 20 3 3XSSC PC-1 L24 1 4 20 4 AT4G00810 PC-1 P12 1 4 20 5 3XSSC PC-1 P24 1 4 20 6 At4g36630 expressed protein 1 4 20 7 At4g36680 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat; identical to cDNA membrane-associated salt-inducible protein like GI:2632060 1 4 20 8 At4g36820 "hypothetical protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 1 4 20 9 At4g36870 BEL1-like homeobox 2 protein (BLH2) 1 4 20 10 At4g37050 "patatin, putative similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734" 1 4 20 11 At4g37110 expressed protein 1 4 20 12 At4g37270 "cadmium/zinc-transporting ATPase, putative (HMA1) contains InterPro accession IPR001757: ATPase, E1-E2 type; identical to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC 3.6.3.5) (Swiss-Prot:Q9M3H5) [Arabidopsis thaliana]; identical to cDNA putative transcription factor (MYB73) mRNA, partial cds GI:3941503" 1 4 20 13 At4g37320 cytochrome P450 family protein 1 4 20 14 At4g39920 tubulin folding cofactor C / Porcino (POR) identical to tubulin-folding cofactor C (Porcino; POR) GI:20514261 from [Arabidopsis thaliana]; identical to cDNA tubulin folding cofactor C GI:20514260 1 4 20 15 At4g39960 "DNAJ heat shock family protein similar to SP|Q9S5A3 Chaperone protein dnaJ {Listeria monocytogenes}; contains Pfam profiles PF00226 DnaJ domain, PF01556 DnaJ C terminal region, PF00684 DnaJ central domain (4 repeats)" 1 4 20 16 At4g32730 myb family transcription factor identical to PC-MYB1 GI:5678826 from [Arabidopsis thaliana]; 1 4 20 17 At5g01050 "laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773" 1 4 20 18 At5g01220 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase / sulfolipid synthase (SQD2) identical to GI:20302857 1 4 20 19 At5g01240 "amino acid permease, putative strong similarity to AUX1 GI:1531758 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 1 4 20 20 At5g01410 "stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963" 1 4 20 21 At5g01470 expressed protein 1 4 20 22 At5g04170 calcium-binding EF hand family protein low similarity to peflin [Homo sapiens] GI:6015440; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 1 4 20 23 At5g04220 C2 domain-containing protein (sytC) GC donor splice site at exon 3; similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] 1 4 20 24 At5g04410 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) protein; supporting cDNA gi|6456750|gb|AF201456.1|AF201456 1 4 20 25 At5g04460 expressed protein 1 4 21 1 At5g04650 "hypothetical protein predicted protein, Arabidopsi thaliana" 1 4 21 2 At5g04710 "aspartyl aminopeptidase, putative similar to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21) {Homo sapiens}; contains Pfam profile PF02127: Aminopeptidase I zinc metalloprotease (M18)" 1 4 21 3 At5g04850 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 1 4 21 4 At5g04900 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 1 4 21 5 At5g07460 "peptide methionine sulfoxide reductase, putative similar to peptide methionine sulfoxide reductase (msr) [Arabidopsis thaliana] GI:4884033; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase" 1 4 21 6 At5g07510 glycine-rich protein (GRP14) oleosin; glycine-rich protein 14 (GRP14) PMID:11431566; PIR:JQ1063 1 4 21 7 At5g07680 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 1 4 21 8 At5g07760 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 1 4 21 9 At5g07940 expressed protein 1 4 21 10 At5g08000 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 1 4 21 11 At5g08160 "serine/threonine protein kinase, putative identical to serine/threonine protein kinase [Arabidopsis thaliana] gi|2109293|gb|AAB69123" 1 4 21 12 At5g08190 "TATA-binding protein-associated phosphoprotein Dr1 protein, putative similar to Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana]; similar to TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (DR1 protein) (SP:Q01658) [Homo sapiens]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 1 4 21 13 At5g11240 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to uncharacterized protein KIAA0007 (GI:1663708) {Homo sapiens} 1.2e-11 1 4 21 14 At5g11300 "cyclin, putative (CYC3b) similar to cyclin 3a [Arabidopsis thaliana] GI:509425; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain; identical to cDNA cyc3b mRNA for cyclin 3b protein GI:728520" 1 4 21 15 At5g11470 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 1 4 21 16 At5g11530 embryonic flower 1 (EMF1) identical to embryonic flower 1 [Arabidopsis thaliana] GI:15430697 1 4 21 17 At5g11690 "mitochondrial import inner membrane translocase subunit Tim17, putative similar to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17" 1 4 21 18 At5g11750 ribosomal protein L19 family protein similar to plastid ribosomal protein L19 precursor [Spinacia oleracea] gi|7582403|gb|AAF64312 1 4 21 19 At5g11930 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 1 4 21 20 At5g11990 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 1 4 21 21 At5g15130 "WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain; TMV response-related gene product, Nicotiana tabacum, EMBL:AB024510" 1 4 21 22 At5g15190 expressed protein 1 4 21 23 At5g15340 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 1 4 21 24 At5g15410 cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated channel (CNGC2) identical to cyclic nucleotide-gated cation channel GI:3894399 from [Arabidopsis thaliana] 1 4 21 25 At5g15550 "transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak);" 1 4 22 1 At5g15610 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 1 4 22 2 At5g15770 "GCN5-related N-acetyltransferase (GNAT) family protein similar to SP|O93806 Glucosamine-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase) {Candida albicans}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 1 4 22 3 At5g15802 expressed protein 1 4 22 4 At5g18450 "AP2 domain-containing transcription factor, putative DREB2A, Arabidopsis thaliana, EMBL:AB007790" 1 4 22 5 At5g18500 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 22 6 At5g18630 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 1 4 22 7 At5g18680 "F-box family protein / tubby family protein similar to phosphodiesterase (GI:467578) [Mus musculus]; similar to Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein (GI:6730158) [Mus musculus]; contains Pfam PF00646: F-box domain and Pfam PF01167: Tub family" 1 4 22 8 At5g18830 squamosa promoter-binding protein-like 7 (SPL7) identical to squamosa promoter binding protein-like 7 [Arabidopsis thaliana] GI:5931635; contains Pfam profile PF03110: SBP domain 1 4 22 9 At5g18890 inosine-uridine preferring nucleoside hydrolase family protein contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase 1 4 22 10 At5g19030 "RNA recognition motif (RRM)-containing protein low similarity to Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus} SP|Q61413,{Xenopus laevis} SP|O93235; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 1 4 22 11 At5g19080 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 1 4 22 12 At5g22430 expressed protein 1 4 22 13 At5g22490 condensation domain-containing protein contains Pfam profile PF00668: Condensation domain 1 4 22 14 At5g22640 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein contains Pfam profile PF02493: MORN repeat 1 4 22 15 At5g22680 hypothetical protein 1 4 22 16 At5g22850 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 1 4 22 17 At5g22890 "zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type" 1 4 22 18 At5g23070 "thymidine kinase, putative similar to thymidine kinase [Oryza sativa] SWISS-PROT:O81263" 1 4 22 19 At5g23100 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 1 4 22 20 At5g25770 expressed protein 1 4 22 21 At5g25830 "zinc finger (GATA type) family protein GATA transcription factor, Arabidopsis thaliana, PIR:T05288" 1 4 22 22 At5g26000 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; identical to Myrosinase precursor (Sinigrinase) (SP:P37702) [Arabidopsis thaliana] 1 4 22 23 At5g26040 histone deacetylase family protein (HDA2) identical to HDA2 [Arabidopsis thaliana] GI:21105771; similar to SP|Q96DB2 Histone deacetylase 11 (HD11) {Homo sapiens}; contains Pfam profile PF00850: Histone deacetylase family 1 4 22 24 At5g26200 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 22 25 At5g26260 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1 4 23 1 At5g26717 hypothetical protein 1 4 23 2 At5g26720 expressed protein 1 4 23 3 At5g33280 "chloride channel-like (CLC) protein, putative similar to CLC-c, At5g49890 [Arabidopsis thaliana] and chloride channel protein ClC-1 - Nicotiana tabacum, PIR:T02939" 1 4 23 4 At5g33340 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 1 4 23 5 At5g34780 "dehydrogenase E1 component family protein similar to SP|P50136 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase component alpha chain) {Mus musculus}; contains Pfam profile PF00676: Dehydrogenase E1 component" 1 4 23 6 At5g34860 hypothetical protein 1 4 23 7 At5g35020 hypothetical protein 1 4 23 8 At5g35100 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 1 4 23 9 At5g35300 hypothetical protein 1 4 23 10 At5g35360 "acetyl-CoA carboxylase, biotin carboxylase subunit (CAC2) identical to acetyl-CoA carboxylase, biotin carboxylase subunit (CAC2) [Arabidopsis thaliana] GI:1905876" 1 4 23 11 At5g38490 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 1 4 23 12 At5g38550 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 1 4 23 13 At5g38710 "proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative similar to proline oxidase, mitochondrial precursor (Osmotic stress- induced proline dehydrogenase) [Arabidopsis thaliana] SWISS-PROT:P92983" 1 4 23 14 At5g38770 hypothetical protein 1 4 23 15 At5g38950 germin-like protein-related contains some similarity to germin-like protein GI:5869975 from [Triticum aestivum] 1 4 23 16 At5g38990 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 1 4 23 17 At5g39190 germin-like protein (GER2) identical to germin-like protein subfamily 1 member 20 [SP|P92996] 1 4 23 18 At5g39240 expressed protein ; expression supported by MPSS 1 4 23 19 At5g42080 "GTP-binding protein / phragmoplastin, putative strong similarity to GTP-binding protein [Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A [Glycine max] GI:1218004; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family" 1 4 23 20 At5g42110 expressed protein 1 4 23 21 At5g42280 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 23 22 At5g42330 expressed protein 1 4 23 23 At5g42510 disease resistance-responsive family protein similar to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 1 4 23 24 At5g42580 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; similar to flavone synthase II (GI:5081817) [Gerbera hybrida]. 1 4 23 25 At5g42750 expressed protein 1 4 24 1 At5g42790 20S proteasome alpha subunit F1 (PAF1) (gb|AAC32062.1) 1 4 24 2 At5g45340 cytochrome P450 family protein similar to SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 1 4 24 3 At5g45370 nodulin-related / integral membrane family protein contains Pfam profile:PF00892 integral membrane protein DUF6 1 4 24 4 At5g45540 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594; expression supported by MPSS" 1 4 24 5 At5g45590 expressed protein 1 4 24 6 At5g45740 hypothetical protein 1 4 24 7 At5g45775 60S ribosomal protein L11 (RPL11D) 1 4 24 8 At5g45940 MutT/nudix family protein contains Pfam profile PF00293: NUDIX domain 1 4 24 9 At5g46000 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 1 4 24 10 At5g48570 "peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative similar to rof1 [Arabidopsis thaliana] GI:1373396" 1 4 24 11 At5g48620 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 1 4 24 12 At5g48750 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana];" 1 4 24 13 At5g48810 cytochrome b5 identical to cytochrome b5 [Arabidopsis thaliana] GI:4240122; strong similarity to Cytochrome B5 SP:P49098 from [Nicotiana tabacum] 1 4 24 14 At5g48970 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 1 4 24 15 At5g49020 protein arginine N-methyltransferase family protein similar to protein arginine methyltransferase [Mus musculus] GI:5257221 1 4 24 16 At5g49200 WD-40 repeat family protein / zfwd4 protein (ZFWD4) contains 6 WD-40 repeats (PF00400); contains Zinc finger C-x8-C-x5-C-x3-H type domain (PF00642); identical to zfwd4 protein (GI:12057170) [Arabidopsis thaliana] 1 4 24 17 At5g49240 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain; contains similarity to two-component response regulator proteins 1 4 24 18 At5g51960 expressed protein 1 4 24 19 At5g52020 AP2 domain-containing protein low similarity to DREB1B GI:3738226 from [Arabidopsis thaliana]; contains Pfam profile PF00847: AP2 domain 1 4 24 20 At5g52180 expressed protein 1 4 24 21 At5g52230 expressed protein 1 4 24 22 At5g52410 expressed protein 1 4 24 23 At5g52470 fibrillarin 1 (FBR1) (FIB1) (SKIP7) identical to fibrillarin 1 GI:9965653 from [Arabidopsis thaliana]; C-terminus identical to SKP1 interacting partner 7 GI:10716959 from [Arabidopsis thaliana]; contains Pfam domain PF01269: Fibrillarin 1 4 24 24 At5g52630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 1 4 24 25 At5g52670 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 1 4 25 1 At5g55350 "membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related contains similarity to wax synthase wax synthase - Simmondsia chinensis, PID:g5020219 similar to wax synthase [gi:5020219] from Simmondsia chinensis" 1 4 25 2 At5g55410 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 1 4 25 3 At5g55570 expressed protein 1 4 25 4 At5g55610 expressed protein 1 4 25 5 At5g55780 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 1 4 25 6 At5g55840 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 1 4 25 7 At5g56000 "heat shock protein 81-4 (HSP81-4) nearly identical to heat shock protein hsp81.4 [Arabidopsis thaliana] GI:1906828; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein" 1 4 25 8 At5g56060 hypothetical protein 1 4 25 9 At5g58640 selenoprotein-related contains weak similarity to Selenoprotein W (Swiss-Prot:P49904) [Rattus norvegicus] 1 4 25 10 At5g58700 phosphoinositide-specific phospholipase C family protein contains Pfam profile: PF00388 phosphatidylinositol-specific phospholipase C 1 4 25 11 At5g58860 cytochrome P450 86A1 (CYP86) (CYP86A1) / CYPLXVI / P450-dependent fatty acid omega-hydroxylase identical to Cytochrome P450 86A1 (CYPLXVI) (P450-dependent fatty acid omega-hydroxylase) (SP:P48422) [Arabidopsis thaliana] 1 4 25 12 At5g58920 expressed protein 1 4 25 13 At5g59060 expressed protein ; expression supported by MPSS 1 4 25 14 At5g59110 "subtilisin-like serine protease-related similar to prepro-cucumisin GI:807698 from [Cucumis melo], subtilisin-like protease C1 [Glycine max] GI:13325079" 1 4 25 15 At5g59270 lectin protein kinase family protein contains Pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain 1 4 25 16 At5g59320 lipid transfer protein 3 (LTP3) identical to lipid transfer protein 3 from Arabidopsis thaliana [gi:8571921]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 1 4 25 17 At5g61950 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 1 4 25 18 At5g62000 "transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393" 1 4 25 19 At5g62165 MADS-box protein (AGL42) 1 4 25 20 At5g62220 exostosin family protein contains Pfam profile: PF03016 Exostosin family 1 4 25 21 At5g62400 hypothetical protein 1 4 25 22 At5g62470 myb family transcription factor (MYB96) contains Pfam profile: PF00249 myb-like DNA-binding domain 1 4 25 23 At5g62600 transportin-SR-related contains weak similarity to transportin-SR (GI:5052414) [Homo sapiens] 1 4 25 24 At5g62660 F-box family protein contains Pfam profile: PF00646 F-box domain 1 4 25 25 At5g65207 expressed protein 1 4 26 1 At5g65240 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 1 4 26 2 At5g65420 "cyclin, putative similar to cyclin D2.1 protein [Nicotiana tabacum] GI:4160298; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 1 4 26 3 At5g65460 kinesin motor protein-related contains similarity to kinesin heavy chain 1 4 26 4 At5g65630 DNA-binding bromodomain-containing protein similar to 5.9 kb fsh membrane protein [Drosophila melanogaster] GI:157455; contains Pfam profile PF00439: Bromodomain 1 4 26 5 At5g65683 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 1 4 26 6 At5g65840 expressed protein 1 4 26 7 At5g65900 "DEAD/DEAH box helicase, putative contains Pfam profiles PF00270:DEAD/DEAH box helicase and PF00271: Helicase conserved C-terminal domain; identical to cDNA RH27 helicase, partial GI:4033334" 1 4 26 8 ath-MIR159a miRNA gene Arabidopsis thaliana miR159a stem-loop 1 4 26 9 ath-MIR169d miRNA gene Arabidopsis thaliana miR169d stem-loop 1 4 26 10 3xSSC 3xSSC 1 4 26 11 3xSSC 3xSSC 1 4 26 12 3xSSC 3xSSC 1 4 26 13 3xSSC 3xSSC 1 4 26 14 3xSSC 3xSSC 1 4 26 15 3xSSC 3xSSC 1 4 26 16 atc05 Randomly generated negative control 1 4 26 17 atc11 Randomly generated negative control 1 4 26 18 At5g46430 60S ribosomal protein L32 (RPL32B) 1 4 26 19 atc01 Randomly generated negative control 1 4 26 20 Alien7 Control: Stratagene Spotreport Alien Oligo 1 4 26 21 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 1 4 26 22 atc09 Randomly generated negative control 1 4 26 23 Alien3 Control: Stratagene Spotreport Alien Oligo 1 4 26 24 Blank Blank 1 4 26 25 Blank Blank 2 1 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 1 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 2 1 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 1 1 5 atc07 Randomly generated negative control 2 1 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 2 1 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 1 8 atc03 Randomly generated negative control 2 1 1 9 At1g01050 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase" 2 1 1 10 At1g01100 60S acidic ribosomal protein P1 (RPP1A) similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from [Arabidopsis thaliana] 2 1 1 11 At1g01230 ORMDL family protein contains Pfam domain PF04061: ORMDL family 2 1 1 12 At1g01300 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 2 1 1 13 At1g01480 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 [GI:166578] from [Arabidopsis thaliana] 2 1 1 14 At1g01540 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 1 1 15 At1g01710 "acyl-CoA thioesterase family protein contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain" 2 1 1 16 At1g01760 adenosine-deaminase family / editase family similar to double-stranded RNA-specific editase GB:AAF69673 GI:7770275 from [Danio rerio] 2 1 1 17 At1g04350 "2-oxoglutarate-dependent dioxygenase, putative Similar to Arabidopsis 2A6 (gb|X83096) and to tomato ethylene synthesis regulatory protein E8 (SP|P10967); EST gb|T76913 comes from this gene" 2 1 1 18 At1g04410 "malate dehydrogenase, cytosolic, putative strong similarity to malate dehydrogenase from Mesembryanthemum crystallinum [SP|O24047], Medicago sativa [SP|O48905], Prunus persica [GI:15982948]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 2 1 1 19 At1g04570 integral membrane transporter family protein contains 8 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to hypothetical protein GB:AAD38263 2 1 1 20 At1g04610 flavin-containing monooxygenase / FMO (YUCCA3) identical to gi:16555356 2 1 1 21 At1g04790 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 1 1 22 At1g04850 ubiquitin-associated (UBA)/TS-N domain-containing protein weak similarity to SP|P45974 Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) {Homo sapiens}; contains Pfam profile PF00627: UBA/TS-N domain 2 1 1 23 At1g04985 expressed protein 2 1 1 24 At1g05040 hypothetical protein 2 1 1 25 At1g07650 "leucine-rich repeat transmembrane protein kinase, putative similar to GB:AAC50043 from [Arabidopsis thaliana] (Plant Mol. Biol. 37 (4), 587-596 (1998))" 2 1 2 1 At1g07700 thioredoxin family protein low similarity to thioredoxin [Gallus gallus] GI:212766; contains Pfam profile: PF00085 Thioredoxin 2 1 2 2 At1g07795 expressed protein 2 1 2 3 At1g07840 leucine zipper factor-related similar to charged amino acid rich leucine zipper factor-1 (GI:12061569) {Mus musculus} 2 1 2 4 At1g07960 thioredoxin family protein low similarity to protein disulfide isomerase 4 [Giardia intestinalis] GI:13489047; contains Pfam profile PF00085: Thioredoxin 2 1 2 5 At1g08000 zinc finger (GATA type) family protein similar to PIR:T05288 from [Arabidopsis thaliana] 2 1 2 6 At1g08130 "DNA ligase / polydeoxyribonucleotide synthase [ATP] identical to SP|Q42572 DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) {Arabidopsis thaliana}; contains Pfam profiles: PF01068 ATP dependent DNA ligase domain, PF04679 ATP dependent DNA ligase C terminal region, PF04675 DNA ligase N terminus" 2 1 2 7 At1g08180 expressed protein 2 1 2 8 At1g10760 starch excess protein (SEX1) identical to SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA gi|12044357|gb|AF312027.1|AF312027 2 1 2 9 At1g10820 expressed protein similar to hypothetical protein GB:AAB71979 2 1 2 10 At1g10980 expressed protein ; expression supported by MPSS 2 1 2 11 At1g11040 DNAJ chaperone C-terminal domain-containing protein contains Pfam profile PF01556: DnaJ C terminal region 2 1 2 12 At1g11210 expressed protein contains similarity to cotton fiber expressed protein 1 [Gossypium hirsutum] gi|3264828|gb|AAC33276 2 1 2 13 At1g11270 F-box family protein contains F-box domain Pfam:PF00646 2 1 2 14 At1g11400 expressed protein 2 1 2 15 At1g11460 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 2 1 2 16 At1g14240 nucleoside phosphatase family protein / GDA1/CD39 family protein low similarity to nod factor binding lectin-nucleotide phosphohydrolase [Dolichos biflorus] GI:4868375; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family 2 1 2 17 At1g14280 "phytochrome kinase, putative contains similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 [Arabidopsis thaliana]" 2 1 2 18 At1g14430 glyoxal oxidase-related low similarity to glyoxal oxidase precursor (glx1) [Phanerochaete chrysosporium] GI:1050302 2 1 2 19 At1g14490 DNA-binding protein-related contains similarity to DNA-binding proteins 2 1 2 20 At1g14660 "sodium proton exchanger, putative (NHX8) similar to Na+ H+ antiporter GB:CAA69925 GI:1655702 from (Xenopus laevis); similar to putative Na+/H+ antiporter SOS1 [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 2 1 2 21 At1g14687 zinc finger homeobox family protein / ZF-HD homeobox family protein 2 1 2 22 At1g14820 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 [Saccharomyces cerevisiae (Baker's yeast)] 2 1 2 23 At1g14870 "expressed protein similar to PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614" 2 1 2 24 At1g17550 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase 2C GI:3242077 from (Arabidopsis thaliana) 2 1 2 25 At1g17615 "disease resistance protein (TIR-NBS class), putative domain signature TIR exists, suggestive of a disease resistance protein." 2 1 3 1 At1g17770 "SET domain-containing protein (SUVH7) contains Pfam profiles: PF05033: Pre-SET motif, PF00856 SET domain; identical to cDNA SUVH7 (SUVH7) GI:13517754" 2 1 3 2 At1g17810 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 2 1 3 3 At1g17970 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 1 3 4 At1g18030 "protein phosphatase 2C, putative / PP2C, putative contains similarity to protein phosphatase 2C GI:3777604 from [Rattus norvegicus]" 2 1 3 5 At1g18220 hypothetical protein 2 1 3 6 At1g18290 hypothetical protein 2 1 3 7 At1g21150 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 2 1 3 8 At1g21230 "wall-associated kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] GI:3549626; expressed in leaves and stems & induced by salicylic acid or INA (PMID:10380805)" 2 1 3 9 At1g21390 expressed protein 2 1 3 10 At1g21450 scarecrow-like transcription factor 1 (SCL1) identical to scarecrow-like 1 GB:AAF21043 GI:6644390 from [Arabidopsis thaliana] 2 1 3 11 At1g21640 "ATP-NAD kinase family protein contains similarity to NAD kinase [Homo sapiens] gi|20070086|gb|AAM01195; contains Pfam domain, PF01513: ATP-NAD kinase" 2 1 3 12 At1g21690 "replication factor C 37 kDa, putative Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit (Replication factor C 37 kDa subunit, A1 37 kDa subunit, RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains Pfam domain, PF00004: ATPase, AAA family" 2 1 3 13 At1g21860 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 2 1 3 14 At1g21910 AP2 domain-containing transcription factor family protein similar to TINY GB:CAA64359 GI:1246403 from [Arabidopsis thaliana] 2 1 3 15 At1g24480 hypothetical protein 2 1 3 16 At1g24530 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina}; contains 7 WD-40 repeats (PF00400) 2 1 3 17 At1g24851 hypothetical protein 2 1 3 18 At1g25210 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein contains Pfam domain PF03331: UDP-3-O-acyl N-acetylglycosamine deacetylase 2 1 3 19 At1g25360 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 3 20 At1g25410 adenylate isopentenyltransferase 6 / adenylate dimethylallyltransferase / cytokinin synthase (IPT6) identical to adenylate isopentenyltransferase (IPT6) [Arabidopsis thaliana] GI:14279064 2 1 3 21 At1g25570 "leucine-rich repeat protein-related contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376" 2 1 3 22 At1g26100 "cytochrome B561 family protein contains Pfam domain, PF03188: Cytochrome b561" 2 1 3 23 At1g29000 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 2 1 3 24 At1g29040 expressed protein 2 1 3 25 At1g29240 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 2 1 4 1 At1g29300 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 2 1 4 2 At1g29440 auxin-responsive family protein similar to auxin-induced protein 6B (SP:P33083) [Glycine max] 2 1 4 3 At1g29500 "auxin-responsive protein, putative similar to auxin-induced protein 6B (SP:P33083) [Glycine max]" 2 1 4 4 At1g29690 expressed protein 2 1 4 5 At1g29750 "leucine-rich repeat transmembrane protein kinase, putative / serine/threonine kinase, putative (RKF1) similar to receptor-like serine/threonine kinase GI:2465923 from [Arabidopsis thaliana]; identical to cDNA receptor-like serine/threonine kinase (RKF1) GI:2465922" 2 1 4 6 At1g32585 VQ motif-containing protein-related contains weak similarity to Pfma:PF05678 VQ motif 2 1 4 7 At1g32660 F-box family protein contains Pfam profile: PF00646 F-box domain 2 1 4 8 At1g32830 "hypothetical protein similar to At2g04970, At2g15200, At2g14140, At3g30450, At4g03990, At5g34895, At3g47270, At2g02200" 2 1 4 9 At1g32900 "starch synthase, putative similar to starch synthase SP:Q42857 from [Ipomoea batatas]" 2 1 4 10 At1g33055 expressed protein 2 1 4 11 At1g33100 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 2 1 4 12 At1g33320 "cystathionine gamma-synthase, chloroplast, putative / O-succinylhomoserine (Thiol)-lyase, putative strong similarity to SP|P55217 Cystathionine gamma-synthase, chloroplast precursor (EC 4.2.99.9) (CGS) (O-succinylhomoserine (Thiol)-lyase) {Arabidopsis thaliana}; contains Pfam profile PF01053: Cys/Met metabolism PLP-dependent enzyme" 2 1 4 13 At1g33400 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 1 4 14 At1g42550 expressed protein 2 1 4 15 At1g42710 hypothetical protein 2 1 4 16 At1g43230 hypothetical protein 2 1 4 17 At1g43415 hypothetical protein 2 1 4 18 At1g43700 VirE2-interacting protein (VIP1) identical to VirE2-interacting protein VIP1 GB:AAF37279 GI:7258340 from [Arabidopsis thaliana] 2 1 4 19 At1g43770 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 2 1 4 20 At1g43995 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GI:4544460 from [Arabidopsis thaliana] 2 1 4 21 At1g44080 "F-box protein-related / C-type lectin-related contains F-box domain Pfam:PF00646, PF00059: Lectin C-type domain" 2 1 4 22 At1g49150 hypothetical protein 2 1 4 23 At1g49210 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 1 4 24 At1g49400 ribosomal protein S17 family protein similar to 40S ribosomal protein S17 GI:1620985 from [Nicotiana plumbaginifolia] 2 1 4 25 At1g49470 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 1 5 1 At1g49630 "peptidase M16 family protein / insulinase family protein contains Pfam domain, PF05193: Peptidase M16 inactive domain" 2 1 5 2 At1g49700 expressed protein ; expression supported by MPSS 2 1 5 3 At1g49880 Erv1/Alr family protein similar to SP|Q63042 Augmenter of liver regeneration {Rattus norvegicus}; contains Pfam profile PF04777: Erv1 / Alr family 2 1 5 4 At1g49940 expressed protein contains similarity to putative beta-9 tubulin protein GB:AAF40459 GI:7211988 from [Arabidopsis thaliana] 2 1 5 5 At1g52790 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 1 5 6 At1g52830 auxin-responsive protein / indoleacetic acid-induced protein 6 (IAA6) nearly identical to SP|Q38824 Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6) {Arabidopsis thaliana} 2 1 5 7 At1g52990 "thioredoxin family protein similar to SP|P48384 Thioredoxin M-type, chloroplast precursor (TRX-M) {Pisum sativum}; contains Pfam profile PF00085: Thioredoxin" 2 1 5 8 At1g53040 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 2 1 5 9 At1g53200 expressed protein 2 1 5 10 At1g53265 hypothetical protein 2 1 5 11 At1g53420 serine/threonine protein kinase-related contains 1 predicted transmembrane domain; low similarity to receptor-like serine/threonine kinase [Arabidopsis thaliana] GI:2465923 2 1 5 12 At1g53460 expressed protein 2 1 5 13 At1g56070 "elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe]" 2 1 5 14 At1g56120 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 2 1 5 15 At1g56280 "drought-responsive family protein contains an AT-AC intron 3, potentially contains a frameshift. An alternate model provides a translation more consistent with homologous proteins but lacks the AT-AC intron; similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 2 1 5 16 At1g56320 expressed protein 2 1 5 17 At1g56530 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965;" 2 1 5 18 At1g56580 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 5 19 At1g57560 myb family transcription factor (MYB50) similar to DNA-binding protein GI:19058 from [Hordeum vulgare] 2 1 5 20 At1g57610 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 2 1 5 21 At1g61480 "S-locus protein kinase, putative similar to receptor protein kinase (IRK1) GI:836953 from [Ipomoea trifida]; contains S-locus glycoprotein family domain, Pfam:PF00954" 2 1 5 22 At1g61560 "seven transmembrane MLO family protein / MLO-like protein 6 (MLO6) idenctical to membrane protein Mlo6 [Arabidopsis thaliana] gi|14091582|gb|AAK53799; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]; contains Pfam profile PF03094: Mlo family" 2 1 5 23 At1g61710 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 5 24 At1g61770 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9UBS4 DnaJ homolog subfamily B member 11 precursor Homo sapiens; contains Pfam profile PF00226 DnaJ domain 2 1 5 25 At1g61940 F-box family protein / tubby family protein similar to putative Tub family protein GI:4309738 from [Arabidopsis thaliana] 2 1 6 1 At1g62000 expressed protein 2 1 6 2 At1g62200 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family ; contains non-consensus GA donor site at intron 4 2 1 6 3 At1g62250 expressed protein 2 1 6 4 At1g64960 expressed protein 2 1 6 5 At1g65020 expressed protein 2 1 6 6 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 1 6 7 At1g65200 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 2 1 6 8 At1g65342 hypothetical protein 2 1 6 9 At1g65390 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 2 1 6 10 At1g65580 "endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase II isoform (GI:15418718) [Mus musculus]; contains 6 (5 weak) Pfam: Pf00400 WD domain, G-beta repeats and Pfam PF03372: Endonuclease/Exonuclease/phosphatase family" 2 1 6 11 At1g65650 "ubiquitin carboxyl-terminal hydrolase family 1 protein similar to 26S proteasome regulatory complex subunit p37A [Drosophila melanogaster] GI:6434962; contains Pfam profile PF01088: Ubiquitin carboxyl-terminal hydrolase, family 1" 2 1 6 12 At1g68390 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266; expression supported by MPSS" 2 1 6 13 At1g68450 VQ motif-containing protein contains PF05678: VQ motif 2 1 6 14 At1g68585 expressed protein 2 1 6 15 At1g68640 bZIP family transcription factor (PERIANTHIA) identical to transcription factor PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis thaliana] 2 1 6 16 At1g68810 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 6 17 At1g68870 hypothetical protein 2 1 6 18 At1g69030 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 1 6 19 At1g69080 universal stress protein (USP) family protein contains Pfam profile PF00582: universal stress protein family 2 1 6 20 At1g71840 "transducin family protein / WD-40 repeat family protein contains Pfam profile:PF00560 Leucine Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic protein kinase domain; Pfam profile:PF00400 WD domain, G-beta repeat (7 copies)" 2 1 6 21 At1g71870 MATE efflux family protein contains Pfam profile PF01554: Uncharacterized membrane protein family 2 1 6 22 At1g72050 "zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type" 2 1 6 23 At1g72090 "radical SAM domain-containing protein / TRAM domain-containing protein contains Pfam profiles PF00919: UPF0004 family protein, PF04055: radical SAM domain protein, PF01938: TRAM domain" 2 1 6 24 At1g72250 kinesin motor protein-related 2 1 6 25 At1g72310 zinc finger (C3HC4-type RING finger) family protein (ATL3) identical to RING-H2 zinc finger protein (ATL3) GB:AF132013 (Arabidopsis thaliana) 2 1 7 1 At1g72500 inter-alpha-trypsin inhibitor heavy chain-related low similarity to Inter-alpha-inhibitor H4 heavy chain [Rattus norvegicus] GI:2292988; contains Pfam profile PF00092: von Willebrand factor type A domain 2 1 7 2 At1g72550 "tRNA synthetase beta subunit family protein contains Pfam profiles: PF03484 phenylalanine-tRNA synthetase, B5 domain, PF03483 B3/4 domain; an isoform contains a non-consensus TG acceptor splice site at a terminal exon." 2 1 7 3 AT5G57480 PC-1 A11 2 1 7 4 3XSSC PC-1 A23 2 1 7 5 AT1G29930 PC-1 E11 2 1 7 6 3XSSC PC-1 E23 2 1 7 7 AT3G44150 PC-1 I11 2 1 7 8 3XSSC PC-1 I23 2 1 7 9 AT4G00810 PC-1 M11 2 1 7 10 3XSSC PC-1 M23 2 1 7 11 At1g75330 "ornithine carbamoyltransferase, chloroplast / ornithine transcarbamylase / OTCase (OTC) identical to SP|O50039 Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) {Arabidopsis thaliana}" 2 1 7 12 At1g75380 wound-responsive protein-related similar to wound inducive gene GI:8096273 from [Nicotiana tabacum] 2 1 7 13 At1g75560 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 1 7 14 At1g75640 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 1 7 15 At1g75830 "plant defensin-fusion protein, putative (PDF1.1) identical to SP|P30224 Cysteine-rich antifungal protein 1 precursor (AFP1) (Anther-specific protein S18 homolog) {Arabidopsis thaliana}" 2 1 7 16 At1g75880 family II extracellular lipase 1 (EXL1) EXL1 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 2 1 7 17 At1g76050 "pseudouridine synthase family protein contains Pfam profiles: PF00849 RNA pseudouridylate synthase, PF01479: S4 domain" 2 1 7 18 At1g76100 plastocyanin identical to plastocyanin GI:1865683 from [Arabidopsis thaliana] 2 1 7 19 At1g78760 F-box family protein contains F-box domain Pfam:PF00646 2 1 7 20 At1g78800 "glycosyl transferase family 1 protein contains similarity to glycosyltransferase GI:871530 from [Saccharomyces cerevisiae], Alg2 mannosyltransferase [gi:3868942] from Rhizomucor pusillus; contains Pfam profile: PF00534 Glycosyl transferases group 1" 2 1 7 21 At1g78920 vacuolar-type H+-translocating inorganic pyrophosphatase (AVPL1) identical to vacuolar-type H+-translocating inorganic pyrophosphatase GI:6901676 from [Arabidopsis thaliana] 2 1 7 22 At1g78970 "lupeol synthase (LUP1) / 2,3-oxidosqualene-triterpenoid cyclase identical to lupeol synthase GI:1762150 from [Arabidopsis thaliana], 2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis thaliana] GI:2738027; contains Pfam profile PF00432: Prenyltransferase and squalene oxidase repeat; contains TIGRfam profile TIGR01787: squalene/oxidosqualene cyclases; identical to cDNA 2,3-oxidosqualene-triterpenoid cyclase GI:2738026" 2 1 7 23 At1g79130 auxin-responsive family protein similar to auxin-induced protein X10A (SP:P33080) [Glycine max] 2 1 7 24 At1g79190 expressed protein 2 1 7 25 At1g79400 "cation/proton exchanger, putative (CHX2) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 2 1 8 1 At1g79440 "succinate-semialdehyde dehydrogenase (SSADH1) similar to succinate-semialdehyde dehydrogenase [NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526; identical to succinic semialdehyde dehydrogenase mRNA, nuclear gene encoding mitochondrial protein GI:6684441; contains TIGRfam profile TIGR01780:succinic semialdehyde dehydrogenase; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein" 2 1 8 2 At2g02000 "glutamate decarboxylase, putative strong similarity to glutamate decarboxylase [Nicotiana tabacum] GI:21327029" 2 1 8 3 At2g02060 "calcium-dependent protein kinase-related / CDPK-related contains TIGRFAM TIGR01557: myb-like DNA-binding domain, SHAQKYF class; contains Pfam PF00249: Myb-like DNA-binding domain; similar to CDPK substrate protein 1; CSP1 (GI:6942190) [Mesembryanthemum crystallinum]." 2 1 8 4 At2g02300 F-box family protein / SKP1 interacting partner 3-related contains similarity to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana] 2 1 8 5 At2g02370 expressed protein 2 1 8 6 At2g02550 exonuclease family protein contains similarity to exonuclease I [Homo sapiens] gi|4249655|gb|AAD13754 2 1 8 7 At2g02610 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 8 8 At2g02780 "leucine-rich repeat transmembrane protein kinase, putative " 2 1 8 9 At2g02835 hypothetical protein 2 1 8 10 At2g06095 expressed protein 2 1 8 11 At2g06255 expressed protein 2 1 8 12 At2g06820 expressed protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 2 1 8 13 At2g06908 hypothetical protein 2 1 8 14 At2g07240 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 1 8 15 At2g07320 SWIM zinc finger family protein contains Pfam profile PF04434: SWIM zinc finger 2 1 8 16 At2g07779 expressed protein 2 1 8 17 At2g07676 expressed protein 2 1 8 18 At2g15220 "secretory protein, putative similar to NtPRp27 [Nicotiana tabacum] GI:5360263; contains Pfam profile PF04450: Plant Basic Secretory Protein" 2 1 8 19 At2g15280 "reticulon family protein (RTNLB10) low similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311, SP|Q64548 Reticulon 1 (Neuroendocrine-specific protein) {Rattus norvegicus}; contains Pfam profile PF02453: Reticulon" 2 1 8 20 At2g15430 DNA-directed RNA polymerase II 36 kDa polypeptide A / RNA polymerase II subunit 3 (RPB36A) identical to SP|Q39211 DNA-directed RNA polymerase II 36 kDa polypeptide A (EC 2.7.7.6) (RNA polymerase II subunit 3) {Arabidopsis thaliana} 2 1 8 21 At2g15490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 1 8 22 At2g15660 hypothetical protein 2 1 8 23 At2g15730 expressed protein 2 1 8 24 At2g15970 "cold-acclimation protein, putative (FL3-5A3) similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505; identical to cDNA cold acclimation protein WCOR413-like protein alpha form GI:10121840, cold acclimation protein homolog [Arabidopsis thaliana] GI:11127595" 2 1 8 25 At2g16030 expressed protein 2 1 9 1 At2g18876 expressed protein 2 1 9 2 At2g18915 F-box family protein / LOV kelch protein 2 (LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex F-box subunit; identical to Adagio 2 GI:13487070 from [Arabidopsis thaliana]; contains Pfam profiles PF01344: Kelch motif and PF00646: F-box domain; identical to cDNA LOV kelch protein 2 GI:18146957; identical to cDNA Adagio 2 (ADO2) GI:13487069 2 1 9 3 At2g19090 "expressed protein contains Pfam profiles: PF04782 protein of unknown function (DUF632), PF04783 protein of unknown function (DUF630); expression supported by MPSS" 2 1 9 4 At2g19170 subtilase family protein contains similarity to meiotic serine proteinase TMP GI:6468325 from [Lycopersicon esculentum] 2 1 9 5 At2g19380 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); contains Pfam profile PF00096: Zinc finger, C2H2 type" 2 1 9 6 At2g19430 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40 repeats 2 1 9 7 At2g19610 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 2 1 9 8 At2g19640 SET domain-containing protein contains Pfam profile PF00856: SET domain 2 1 9 9 At2g22310 ubiquitin-specific protease 4 (UBP4) identical to GI:2347100 2 1 9 10 At2g22370 expressed protein 2 1 9 11 At2g22560 "kinase interacting protein-related similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia]; weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum" 2 1 9 12 At2g22630 MADS-box protein (AGL17) nearly identical to MADS-box protein AGL17 [Arabidopsis thaliana] GI:862648 2 1 9 13 At2g22800 homeobox-leucine zipper protein 9 (HAT9) / HD-ZIP protein 9 identical to GB:U09341 2 1 9 14 At2g22860 phytosulfokines 2 (PSK2) identical to phytosulfokines 2 (PSK2) from [Arabidopsis thaliana] 2 1 9 15 At2g22990 sinapoylglucose:malate sinapoyltransferase (SNG1) similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa]; contains Pfam profile PF00450: Serine carboxypeptidase; identical to cDNA sinapoylglucose:malate sinapoyltransferase (SNG1) GI:8699618 2 1 9 16 At2g23050 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 1 9 17 At2g25890 glycine-rich protein / oleosin 2 1 9 18 At2g25950 expressed protein 2 1 9 19 At2g26130 "zinc finger (C3HC4-type RING finger) family protein contains a zinc finger, C3HC4 type (RING finger), signature, PROSITE:PS00518" 2 1 9 20 At2g26180 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif 2 1 9 21 At2g26370 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 2 1 9 22 At2g26430 ania-6a type cyclin (RCY1) nearly identical to ania-6a type cyclin [Arabidopsis thaliana] GI:13924511 2 1 9 23 At2g26580 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein 2 1 9 24 At2g26620 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 1 9 25 At2g29310 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 1 10 1 At2g29360 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 1 10 2 At2g29525 expressed protein 2 1 10 3 At2g29560 "enolase, putative similar to enolase [Spinacia oleracea] gi|8919731|emb|CAB96173" 2 1 10 4 At2g29700 pleckstrin homology (PH) domain-containing protein (PH1) identical to AtPH1 [Arabidopsis thaliana] GI:5926716; contains Pfam profile PF00169: PH domain 2 1 10 5 At2g29760 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 10 6 At2g29930 F-box family protein contains F-box domain Pfam:PF00646 2 1 10 7 At2g29970 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 2 1 10 8 At2g32620 "cellulose synthase family protein similar to Zea mays cellulose synthase-5 [gi:9622882], -4 [gi:9622880], -9 [gi:9622890]" 2 1 10 9 At2g32650 expressed protein contains Pfam PF05899: Protein of unknown function (DUF861) 2 1 10 10 At2g32790 "ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme from [Oryza sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134, SP|P35131; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 1 10 11 At2g32850 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 10 12 At2g33000 ubiquitin-associated (UBA)/TS-N domain-containing protein-related contains weak hit to Pfam F00627: UBA/TS-N domain; supported by tandem duplication of ubiquitin-associated (UBA)/TS-N domain protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis thaliana] 2 1 10 13 At2g33060 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 2 1 10 14 At2g33240 "myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin my5A (SP:Q02440) {Gallus gallus}" 2 1 10 15 At2g33290 "SET domain-containing protein (SUVH2) identical to SUVH2 [Arabidopsis thaliana] GI:13517745; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH2 (SUVH2) GI:13517744" 2 1 10 16 At2g35840 sucrose-phosphatase 1 (SPP1) identical to sucrose-phosphatase (SPP1) [Arabidopsis thaliana] GI:11127757 2 1 10 17 At2g35900 expressed protein 2 1 10 18 At2g36050 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 2 1 10 19 At2g36080 "DNA-binding protein, putative strong similarity to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 2 1 10 20 At2g36260 "iron-sulfur cluster assembly complex protein, putative similar to IscA (putative iron-sulfur cluster assembly protein) [Azotobacter vinelandii] GI:2271523; contains Pfam profile PF01521: HesB-like domain" 2 1 10 21 At2g36310 "inosine-uridine preferring nucleoside hydrolase family protein similar to Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania MajorGI:8569431; contains Pfam profile PF01156: Inosine-uridine preferring nucleoside hydrolase" 2 1 10 22 At2g36460 "fructose-bisphosphate aldolase, putative similar to PIR|S65073 fructose-bisphosphate aldolase (EC 4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa]; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 2 1 10 23 At2g36530 enolase identical to SWISS-PROT:P25696 enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate hydro-lyase) [Arabidopsis thaliana] 2 1 10 24 At2g39110 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 2 1 10 25 At2g39180 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 11 1 At2g39340 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 2 1 11 2 At2g39400 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 1 11 3 At2g39550 geranylgeranyl transferase type I beta subunit (GGT-IB) nearly identical to GI:11878247 2 1 11 4 At2g39630 glycosyl transferase family 2 protein similar to dolichyl-phosphate beta-glucosyltransferase from Saccharomyces cerevisiae [SP|P40350]; contains Pfam glycosyltransferase group 2 domain PF00535 2 1 11 5 At2g39730 "ribulose bisphosphate carboxylase/oxygenase activase / RuBisCO activase identical to SWISS-PROT:P10896 ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA)[Arabidopsis thaliana]" 2 1 11 6 At2g39790 mitochondrial glycoprotein family protein / MAM33 family protein low similarity to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 2 1 11 7 At2g42260 expressed protein and genefinder 2 1 11 8 At2g42300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 11 9 At2g42470 meprin and TRAF homology domain-containing protein / MATH domain-containing protein contains Pfam profile PF00917: MATH domain 2 1 11 10 At2g42510 "spliceosome protein-related contains Pfam domain, PF04938: Survival motor neuron (SMN) interacting protein 1 (SIP1)" 2 1 11 11 At2g42650 60S ribosomal protein-related similar to PBK1 protein (GI:3668141) [Homo sapiens]; weak similarity to 60S ribosomal protein L10a. (Swiss-Prot:Q9SW75) [Chlamydomonas reinhardtii] 2 1 11 12 At2g42710 ribosomal protein L1 family protein 2 1 11 13 At2g42880 "mitogen-activated protein kinase, putative / MAPK, putative (MPK20) mitogen-activated protein kinase (MAPK)(AtMPK20), PMID:12119167" 2 1 11 14 At2g42930 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 2 1 11 15 At2g45610 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873 2 1 11 16 At2g45650 MADS-box protein (AGL6) 2 1 11 17 At2g45810 "DEAD/DEAH box helicase, putative " 2 1 11 18 At2g45870 expressed protein contains Pfam profile PF05249: Uncharacterised protein family (UPF0187) 2 1 11 19 At2g46050 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 11 20 At2g46090 "diacylglycerol kinase family protein contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 2 1 11 21 At2g46240 "IQ domain-containing protein / BAG domain-containing protein contains Pfam profiles PF00612: IQ calmodulin-binding motif, PF02179: BAG (Apoptosis regulator Bcl-2 protein) domain" 2 1 11 22 At2g46280 "eukaryotic translation initiation factor 3 subunit 2 / TGF-beta receptor interacting protein 1 / eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to eukaryotic translation initiation factor 3 subunit 2 (SP:Q38884) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies)" 2 1 11 23 At3g01610 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 2 1 11 24 At3g01670 expressed protein 2 1 11 25 At3g01830 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]; Pfam HMM hit: EF hand" 2 1 12 1 At3g01860 expressed protein 2 1 12 2 At3g02010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 12 3 At3g02065 DEAD/DEAH box helicase family protein contains Pfam profile: PF00270 DEAD/DEAH box helicase 2 1 12 4 At3g02200 "proteasome family protein contains Pfam domain, PF01399: PCI domain" 2 1 12 5 At3g02240 expressed protein 2 1 12 6 At3g04860 expressed protein 2 1 12 7 At3g04920 40S ribosomal protein S24 (RPS24A) similar to ribosomal protein S19 GB:445612 [Solanum tuberosum] and similar to ribosomal protein S24 GB:4506703 [Homo sapiens] 2 1 12 8 At3g05090 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to uncharacterized KIAA1449 protein (gi:7959157) [Homo sapiens] 2 1 12 9 At3g05140 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 12 10 At3g05300 cytidine/deoxycytidylate deaminase family protein similar to SP|O34598 Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {Bacillus subtilis}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 2 1 12 11 At3g05360 "disease resistance family protein / LRR family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; similar to elicitor-inducible LRR receptor-like protein EILP [Nicotiana tabacum] gi|6635236|dbj|BAA88636; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 2 1 12 12 At3g05520 F-actin capping protein alpha subunit family protein contains Pfam profile: PF01267 F-actin capping protein alpha subunit 2 1 12 13 At3g05560 60S ribosomal protein L22-2 (RPL22B) identical to 60S ribosomal protein L22-2 SP:Q9M9W1 from [Arabidopsis thaliana] 2 1 12 14 At3g08010 expressed protein 2 1 12 15 At3g08490 hypothetical protein 2 1 12 16 At3g08650 "metal transporter family protein contains ZIP Zinc transporter domain, Pfam:PF02535" 2 1 12 17 At3g08710 "thioredoxin family protein similar to thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090 {Nicotiana tabacum}; contains Pfam profile: PF00085 Thioredoxin" 2 1 12 18 At3g08890 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 12 19 At3g08930 LMBR1 integral membrane family protein contains 5 transmembrane domains; contains Pfam PF04791: LMBR1-like conserved region; similar to unknown protein GB:BAA83351 [Oryza sativa] 2 1 12 20 At3g09050 expressed protein 2 1 12 21 At3g09100 "mRNA capping enzyme family protein similar to mRNA capping enzyme [Xenopus laevis] GI:7239232; contains Pfam profiles PF01331: mRNA capping enzyme catalytic domain, PF00782: Dual specificity phosphatase catalytic domain" 2 1 12 22 At3g11580 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857 and RAV2 GI:3868859, AP2 domain containing protein RAP2.8 [Arabidopsis thaliana] GI:2281641; contains Pfam profile PF02362: B3 DNA binding domain" 2 1 12 23 At3g11630 "2-cys peroxiredoxin, chloroplast (BAS1) identical to SP|Q96291 2-cys peroxiredoxin BAS1, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family" 2 1 12 24 At3g11800 expressed protein 2 1 12 25 At3g11840 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 2 1 13 1 At3g11950 UbiA prenyltransferase family protein contains Pfam profile PF01040: UbiA prenyltransferase family 2 1 13 2 At3g12000 "S-locus related protein SLR1, putative (S1) identical to S-locus related protein SLR1 homolog (AtS1) GI:246209 Arabidopsis thaliana]; contains Pfam profiles PF01453: Lectin (probable mannose binding), PF00954: S-locus glycoprotein family" 2 1 13 3 At3g12145 "polygalacturonase inhibitor, putative / leucine-rich repeat protein (FLR1) similar to Swiss-Prot:Q05091 polygalacturonase inhibitor precursor (Polygalacturonase-inhibiting protein) [Pyrus communis]; identical to leucine-rich repeat protein FLR1 (FLR1) cDNA NCBI_gi:7637422; contains Pfam domain PF00560 Leucine Rich Repeat" 2 1 13 4 At3g12200 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 1 13 5 At3g14610 "cytochrome P450, putative similar to GB:Q05047 from [Catharanthus roseus]" 2 1 13 6 At3g14670 hypothetical protein 2 1 13 7 At3g14840 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; contains 2 predicted transmembrane domains 2 1 13 8 At3g14860 NHL repeat-containing protein contains Pfam profile PF01436: NHL repeat 2 1 13 9 At3g15010 "RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 1 13 10 At3g15030 "TCP family transcription factor, putative similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]" 2 1 13 11 At3g15200 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 13 12 At3g15260 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C GB:AAD17805 from [Lotus japonicus]" 2 1 13 13 At3g17830 "DNAJ heat shock family protein similar to SP|P35514 Chaperone protein dnaJ {Lactococcus lactis}; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats)" 2 1 13 14 At3g17890 expressed protein 2 1 13 15 At3g18080 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase BGQ60 precursor GB:A57512 [Hordeum vulgare]; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 2 1 13 16 At3g18140 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe] 2 1 13 17 At3g18280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to TED4 [Zinnia elegans] GI:493721; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 13 18 At3g18330 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 1 13 19 At3g18485 hypothetical protein 2 1 13 20 At3g18530 expressed protein similar to unknown protein GB:AAF24615 from [Arabidopsis thaliana] 2 1 13 21 At3g21220 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK5) identical to GB:BAA28831 from [Arabidopsis thaliana]; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 2 1 13 22 At3g21270 "Dof-type zinc finger domain-containing protein (ADOF2) identical to Dof zinc finger protein ADOF2 GI:3608263 from [Arabidopsis thaliana]; identical to cDNA adof2 mRNA for Dof zinc finger protein GI:3608262; contains Pfam profile PF02701: Dof domain, zinc finger" 2 1 13 23 At3g21450 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 1 13 24 At3g21510 two-component phosphorelay mediator 3 (HP3) identical to ATHP3 [Arabidopsis thaliana] GI:4156245 2 1 13 25 At3g21650 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 2 1 14 1 At3g21700 expressed protein 2 1 14 2 At3g21840 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At7), putative E3 ubiquitin ligase; similar to Skp1 homolog GI:3068809, UIP2 GI:3719211 from [Arabidopsis thaliana]" 2 1 14 3 At3g21890 zinc finger (B-box type) family protein contains Pfam profile: PF01760 CONSTANS family zinc finger 2 1 14 4 At3g24600 hypothetical protein 2 1 14 5 At3g24660 "leucine-rich repeat transmembrane protein kinase, putative identical to putative kinase-like protein TMKL1 precursor GB:P33543 from [Arabidopsis thaliana], (Plant Mol. Biol. 23 (2), 415-421 (1993))" 2 1 14 6 At3g24830 60S ribosomal protein L13A (RPL13aB) similar to 60S RIBOSOMAL PROTEIN L13A GB:P35427 from [Rattus norvegicus] 2 1 14 7 At3g24890 "synaptobrevin-related similar to SYNAPTOBREVIN-RELATED PROTEIN GB:P47192 from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. (1992) 89(9), 3894-3898); contains Pfam profile PF00957: synaptobrevin" 2 1 14 8 At3g25150 "nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); similar to ras-GTPase-activating protein (GAP<120>) SH3-domain-binding protein 2 GB:NP_035946 [Mus musculus]" 2 1 14 9 At3g25180 cytochrome P450 family protein similar to cytochrome P450 monooxygenase GB:AAC49188 [Pisum sativum]; contains Pfam profile: PF00067 cytochrome P450 2 1 14 10 At3g25470 "bacterial hemolysin-related similar to hemolysine GB:AAD36643 from [Thermotoga maritima], contains Pfam profile: PF01479 S4 domain" 2 1 14 11 At3g25530 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein low similarity to SP|P23523 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) {Escherichia coli}; contains Pfam profile PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase; supporting cDNA gi|15375067|gb|AY044183.1| 2 1 14 12 At3g28140 calmodulin-binding protein 2 1 14 13 At3g28180 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 1 14 14 At3g28360 ABC transporter family protein similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare] 2 1 14 15 At3g28420 expressed protein 2 1 14 16 At3g28600 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 1 14 17 At3g28660 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 14 18 At3g28840 expressed protein 2 1 14 19 At3g28890 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0B [Lycopersicon esculentum] gi|3894387|gb|AAC78593" 2 1 14 20 At3g42670 "SNF2 domain-containing protein / helicase domain-containing protein low similarity to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 2 1 14 21 At3g42725 expressed protein 2 1 14 22 At3g42920 "hypothetical protein predicted proteins, Arabidopsis thaliana" 2 1 14 23 At3g42990 hypothetical protein 2 1 14 24 At3g43280 "hypothetical protein predicted protein, Arabidopsis thaliana" 2 1 14 25 At3g43350 "helicase-related low similarity to SP|Q9UUA2 DNA repair and recombination protein pif1, mitochondrial precursor {Schizosaccharomyces pombe}" 2 1 15 1 At3g43540 "expressed protein hypothetical protein slr1699 - Synechocystis sp. (strain PCC 6803), PIR:S75306" 2 1 15 2 At3g43583 hypothetical protein 2 1 15 3 At3g46550 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan protein FLA8 [Arabidopsis thaliana] gi|10880493|gb|AAG24276 2 1 15 4 At3g46610 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 15 5 At3g46790 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 15 6 At3g46850 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo]; 2 1 15 7 At3g47030 F-box family protein contains F-box domain Pfam:PF00646 2 1 15 8 At3g47090 "leucine-rich repeat transmembrane protein kinase, putative receptor kinase-like protein (Xa21), Oryza longistaminata, U72725" 2 1 15 9 At3g47250 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 1 15 10 At3g47320 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 2 1 15 11 At3g50100 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 1 15 12 At3g50160 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 2 1 15 13 At3g50330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 15 14 At3g50376 hypothetical protein 2 1 15 15 At3g50550 expressed protein isoform contains a non-consensus AT donor site at intron 1 2 1 15 16 At3g50610 hypothetical protein 2 1 15 17 At3g50780 expressed protein 2 1 15 18 At3g50840 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 1 15 19 At3g53440 expressed protein 2 1 15 20 At3g53470 "expressed protein ribosomal protein S25, cytosolic, Arabidopsis thaliana, PIR:T08568" 2 1 15 21 At3g53610 "Ras-related GTP-binding protein, putative similar to Ras-related protein ARA-3 SP:P28186 from [Arabidopsis thaliana]" 2 1 15 22 At3g53670 expressed protein 2 1 15 23 At3g53810 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 1 15 24 At3g53870 "40S ribosomal protein S3 (RPS3B) ribosomal protein S3a - Xenopus laevis, PIR:R3XL3A" 2 1 15 25 At3g53990 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 2 1 16 1 At3g54030 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 16 2 At3g56810 expressed protein 2 1 16 3 At3g56860 UBP1 interacting protein 2a (UBA2a) identical to UBP1 interacting protein 2a [Arabidopsis thaliana] GI:19682816; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 1 16 4 At3g57040 two-component responsive regulator / response reactor 4 (RR4) identical to responce reactor4 GI:3273202 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 1 16 5 At3g57100 hypothetical protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana]; contains Pfam PF05055 : Protein of unknown function (DUF677); contains Prosite PS00453: FKBP-type peptidyl-prolyl cis-trans isomerase signature 1; contains one transmembrane domain 2 1 16 6 At3g57280 expressed protein contains Pfam profile PF03647: Uncharacterised protein family (UPF0136) 2 1 16 7 At3g57340 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI4 DnaJ homolog subfamily B member 12 Mus musculus; contains Pfam profile PF00226 DnaJ domain 2 1 16 8 At3g57480 "zinc finger (C2H2 type, AN1-like) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type; contains Pfam domain, PF01428: AN1-like Zinc finger" 2 1 16 9 At3g57530 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247" 2 1 16 10 At3g60300 RWD domain-containing protein contains weak similarity to RING finger protein 25 (RING finger protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus] 2 1 16 11 At3g60350 "armadillo/beta-catenin repeat family protein / F-box family protein contains Pfam profiles PF00514: Armadillo/beta-catenin-like repeat, PF00646: F-box domain; similar to F-box protein FBL2 (GI:6010699) [Rattus norvegicus]" 2 1 16 12 At3g60520 expressed protein 2 1 16 13 At3g60560 hypothetical protein 04.05.01.01 2 1 16 14 At3g60740 tubulin folding cofactor D identical to tubulin folding cofactor D GI:20514263 from [Arabidopsis thaliana] 2 1 16 15 At3g60800 zinc finger (DHHC type) family protein contains DHHC zinc finger domain PF01529 2 1 16 16 At3g60960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 16 17 At3g61040 "cytochrome P450 family protein similar to cytochrome P450 monooxygenase - Arabidopsis thaliana, EMBL:D78600" 2 1 16 18 At4g00165 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 16 19 At4g00220 LOB domain protein 30 / lateral organ boundaries domain protein 30 (LBD30) identical to LOB DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported by full-length cDNA gi:16660631 2 1 16 20 At4g00335 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 1 16 21 At4g00355 expressed protein 2 1 16 22 At4g00490 "beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative similar to beta-amylase from SP:O64407 [Vigna unguiculata]; contains Pfam profile PF01373: Glycosyl hydrolase family 14" 2 1 16 23 At4g00540 myb family transcription factor 2 1 16 24 At4g00660 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicases" 2 1 16 25 At4g00695 hypothetical protein 2 1 17 1 At4g03175 protein kinase family protein contains similarity to Swiss-Prot:P51566 protein kinase AFC1 [Arabidopsis thaliana] 2 1 17 2 At4g03210 "xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative contains similarity to xyloglucan endo-transglycosylase-like protein (XET-1) GI:5070246 from [Medicago truncatula]" 2 1 17 3 At4g03360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 1 17 4 At4g03410 peroxisomal membrane protein-related contains weak similarity to Swiss-Prot:P42925 22 kDa peroxisomal membrane protein [Mus musculus] 2 1 17 5 At4g03560 two-pore calcium channel (TPC1) identical to two-pore calcium channel (TPC1) [Arabidopsis thaliana] gi|14041819|dbj|BAB55460 2 1 17 6 At4g03610 phosphonate metabolism protein-related weak similarity to PhnP protein. (Swiss-Prot:P16692) [Escherichia coli] 2 1 17 7 At4g03965 hypothetical protein 2 1 17 8 At4g04010 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At1g32840, At2g06430, At2g15140, At2g04980, At2g14130, At3g44500, At2g15190, At3g47260, At5g34900, At3g29210, At2g02210, At3g32900" 2 1 17 9 At4g08770 "peroxidase, putative identical to class III peroxidase ATP38 [Arabidopsis thaliana] gi|17530568|gb|AAL40851; similar to peroxidase C2 precursor [Armoracia rusticana] SWISS-PROT: P17179; identical to cDNA class III peroxidase ATP38 GI:17530567" 2 1 17 10 At4g08840 pumilio/Puf RNA-binding domain-containing protein contains similarity to RNA binding protein PufA [Dictyostelium discoideum] gi|5106561|gb|AAD39751 2 1 17 11 At4g08980 F-box family protein (FBW2) contains similarity to N7 protein GI:3273101 from [Medicago truncatula] 2 1 17 12 At4g09040 "RNA recognition motif (RRM)-containing protein low similarity to enhancer binding protein-1; EBP1 [Entamoeba histolytica] GI:8163877, SP|P19682 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) {Nicotiana sylvestris}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 1 17 13 At4g09250 SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to RanBPM [Homo sapiens] GI:15080674; contains Pfam profile PF00622: SPRY domain 2 1 17 14 At4g09320 nucleoside diphosphate kinase 1 (NDK1) identical to identical to Nucleoside diphosphate kinase I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207) [Arabidopsis thaliana]; contains Pfam PF00334 : Nucleoside diphosphate kinase domain; 2 1 17 15 At4g09510 "beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase" 2 1 17 16 At4g09570 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 2 1 17 17 At4g12330 cytochrome P450 family protein contains Pfam profile:PF00067 cytochrome p450 2 1 17 18 At4g12390 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 1 17 19 At4g12545 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains protease inhibitor/seed storage/LTP family domain, Pfam:PF00234" 2 1 17 20 At4g12600 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 2 1 17 21 At4g12780 auxilin-related low similarity to SP|Q27974 Auxilin {Bos taurus} 2 1 17 22 At4g12830 "hydrolase, alpha/beta fold family protein low similarity to haloalkane dehalogenase from [Mycobacterium avium subsp. avium] GI:14422311, [Pseudomonas pavonaceae] GI:6689030; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 1 17 23 At4g13010 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430]; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 2 1 17 24 At4g13070 group II intron splicing factor CRS1-related contains weak similarity to CRS1 [Zea mays] gi|9837550|gb|AAG00595 2 1 17 25 At4g15430 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 2 1 18 1 At4g15480 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 1 18 2 At4g15650 protein kinase-related contains weak similarity to protein kinase [Dictyostelium discoideum] gi|551446|emb|CAA86053 2 1 18 3 At4g15710 hypothetical protein 2 1 18 4 At4g15840 expressed protein 2 1 18 5 At4g15900 "PP1/PP2A phosphatases pleiotropic regulator 1 (PRL1) identical to PP1/PP2A phosphatases pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis thaliana], PRL1 [Arabidopsis thaliana] GI:577733; contains Pfam PF00400: WD domain, G-beta repeat (7 copies)" 2 1 18 6 At4g16060 expressed protein 2 1 18 7 At4g16110 two-component responsive regulator family protein / response regulator family protein similar to ARR2 protein GI:4210451 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 1 18 8 At4g18580 expressed protein 2 1 18 9 At4g18600 expressed protein 2 1 18 10 At4g18760 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611" 2 1 18 11 At4g18820 expressed protein 2 1 18 12 At4g18980 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 2 1 18 13 At4g19006 "26S proteasome regulatory subunit, putative (RPN9) similar to 26S proteasome subunit p40.5 [Homo sapiens] gi|3618343|dbj|BAA33214" 2 1 18 14 At4g19150 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 2 1 18 15 At4g19190 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 1 18 16 At4g22050 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 2 1 18 17 At4g22110 "alcohol dehydrogenase, putative similar to alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon esculentum]; contains Pfam zinc-binding dehydrogenase domain PF00107" 2 1 18 18 At4g22230 expressed protein 2 1 18 19 At4g22260 "alternative oxidase, putative / immutans protein (IM) identical to IMMUTANS from Arabidopsis thaliana [gi:4138855]; contains Pfam profile PF01786 alternative oxidase" 2 1 18 20 At4g22400 expressed protein 2 1 18 21 At4g22460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 2 1 18 22 At4g22650 "hypothetical protein various predicted proteins, Arabidopsis thaliana" 2 1 18 23 At4g22710 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome p450 2 1 18 24 At4g25270 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 1 18 25 At4g25315 Expressed protein 2 1 19 1 At4g25450 ABC transporter family protein similar to multidrug resistance protein 2 SP:P21440 from [Mus musculus] 2 1 19 2 At4g25510 hypothetical protein 2 1 19 3 At4g25680 expressed protein 2 1 19 4 At4g25720 glutamine cyclotransferase family protein contains Pfam profile: PF05096 glutamine cyclotransferase 2 1 19 5 At4g25890 "60S acidic ribosomal protein P3 (RPP3A) acidic ribosomal protein P3a - maize, PIR2:T02037" 2 1 19 6 At4g25950 "vacuolar ATP synthase, putative / V-ATPase, putative / vacuolar proton pump, putative similar to Swiss-Prot:O82629 vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2, Vacuolar proton pump G subunit 2) [Arabidopsis thaliana]" 2 1 19 7 At4g28460 hypothetical protein 2 1 19 8 At4g28510 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 1 19 9 At4g28670 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 2 1 19 10 At4g28706 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 1 19 11 At4g28870 hypothetical protein 2 1 19 12 At4g28940 nucleosidase-related contains weak similarity to MTA/SAH nucleosidase (P46). (Swiss-Prot:P24247) [Shigella flexneri] 2 1 19 13 At4g29110 hypothetical protein 2 1 19 14 At4g29160 "SNF7 family protein contains Pfam domain, PF03357: SNF7 family" 2 1 19 15 At4g31720 transcription initiation factor IID (TFIID) 23-30kDa subunit (TAF2H) family protein contains Pfam profile: PF03540 transcription initiation factor TFIID 23-30kDa 2 1 19 16 At4g31780 "1,2-diacylglycerol 3-beta-galactosyltransferase, putative / monogalactosyldiacylglycerol synthase, putative / MGDG synthase, putative similar to MGD synthase type A from Arabidopsis thaliana [gi:9927297], similar to monogalactosyldiacylglycerol synthase, Cucumis sativus, PID:g1805254" 2 1 19 17 At4g31890 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 2 1 19 18 At4g31950 "cytochrome P450 family protein cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153" 2 1 19 19 At4g32090 hypothetical protein 2 1 19 20 At4g32140 expressed protein 2 1 19 21 At4g32320 peroxidase family protein similar to L-ascorbate peroxidase [Arabidopsis thaliana] gi|1523789|emb|CAA66925; contains Pfam profile PF00141: Peroxidase 2 1 19 22 At4g32375 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains Pfam profile PF00295: Polygalacturonase (pectinase) 2 1 19 23 AT5G57480 PC-1 A11 2 1 19 24 3XSSC PC-1 A23 2 1 19 25 AT1G29930 PC-1 E11 2 1 20 1 3XSSC PC-1 E23 2 1 20 2 AT3G44150 PC-1 I11 2 1 20 3 3XSSC PC-1 I23 2 1 20 4 AT4G00810 PC-1 M11 2 1 20 5 3XSSC PC-1 M23 2 1 20 6 At4g34920 1-phosphatidylinositol phosphodiesterase-related contains weak similarity to 1-phosphatidylinositol phosphodiesterase precursor (EC 3.1.4.10) (Phosphatidylinositol-specific phospholipase C) (PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes] 2 1 20 7 At4g34980 "subtilase family protein similar to SBT1, a subtilase from tomato plants GI:1771160 from [Lycopersicon esculentum]" 2 1 20 8 At4g35130 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 1 20 9 At4g35180 amino acid transporter family protein similar to amino acid permease 1 GI:976402 from [Nicotiana sylvestris]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 2 1 20 10 At4g35335 "nucleotide-sugar transporter family protein similar to SP|O77592 UDP N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter) {Canis familiaris}, SP|P78382 CMP-sialic acid transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter" 2 1 20 11 At4g35380 guanine nucleotide exchange family protein similar to guanine nucleotide exchange factor [Homo sapiens] GI:5456754; contains Pfam profile PF01369: Sec7 domain 2 1 20 12 At4g35520 "DNA mismatch repair family protein similar to SP|Q9UHC1 DNA mismatch repair protein Mlh3 (MutL protein homolog 3) {Homo sapiens}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF01119: DNA mismatch repair protein, C-terminal domain" 2 1 20 13 At4g35580 no apical meristem (NAM) family protein similar to TIP [Arabidopsis thaliana] GI:9408601; contains Pfam profile PF02365: No apical meristem (NAM) protein 2 1 20 14 At4g38225 expressed protein 2 1 20 15 At4g38250 amino acid transporter family protein low similarity to lysosomal amino acid transporter 1 [Rattus norvegicus] GI:14571904; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 2 1 20 16 At4g38430 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 2 1 20 17 At4g38495 expressed protein 2 1 20 18 At4g38660 "thaumatin, putative similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406, thaumatin-like protein precursor [Pyrus pyrifolia] GI:3241854; contains Pfam profile PF00314: Thaumatin family" 2 1 20 19 At4g38730 expressed protein 2 1 20 20 At4g38900 "bZIP protein vsf-1 protein, Lycopersicon esculentum, PIR2:S52203" 2 1 20 21 At4g38930 ubiquitin fusion degradation UFD1 family protein similar to SP|P70362 Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) {Mus musculus}; contains Pfam profile PF03152: Ubiquitin fusion degradation protein UFD1 2 1 20 22 At5g02350 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 20 23 At5g02410 DIE2/ALG10 family contains Pfam PF04922: DIE2/ALG10 family 2 1 20 24 At5g02560 "histone H2A, putative similar to histone H2A from Pisum sativum SP|P25470, Zea mays SP|P40280, Petroselinum crispum SP|P19177; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 1 20 25 At5g02600 "heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana" 2 1 21 1 At5g02740 expressed protein 2 1 21 2 At5g02800 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 1 21 3 At5g02960 "40S ribosomal protein S23 (RPS23B) ribosomal protein S23, Fragaria x ananassa, PIR:S56673" 2 1 21 4 At5g03020 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 2 1 21 5 At5g05700 arginine-tRNA-protein transferase 1 / arginyltransferase 1 / arginyl-tRNA-protein transferase 1 (ATE1) identical to SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC 2.3.2.8) (R-transferase 1) (Arginyltransferase 1) (Arginyl-tRNA--protein transferase 1) {Arabidopsis thaliana} 2 1 21 6 At5g05740 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains Pfam PF02163: Sterol-regulatory element binding protein (SREBP) site 2 protease 2 1 21 7 At5g05920 deoxyhypusine synthase almost identical to deoxyhypusine synthase GI:15431345 from [Arabidopsis thaliana] 2 1 21 8 At5g05960 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 1 21 9 At5g06110 "DNAJ heat shock N-terminal domain-containing protein / cell division protein-related similar to GlsA [Volvox carteri f. nagariensis] GI:4633129; contains Pfam profiles PF00226 DnaJ domain, PF00249 Myb-like DNA-binding domain" 2 1 21 10 At5g06150 cyclin 1b (CYC1b) identical to cyclin [Arabidopsis thaliana] GI:1360646 2 1 21 11 At5g06280 expressed protein similar to unknown protein (pir||T08447) 2 1 21 12 At5g06340 "diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus angustifolius] GI:1888557, [Hordeum vulgare subsp. vulgare] GI:2564253; contains Pfam profile PF00293: NUDIX domain" 2 1 21 13 At5g09420 "chloroplast outer membrane translocon subunit, putative similar to component of chloroplast outer membrane translocon Toc64 [Pisum sativum] GI:7453538; contains Pfam profiles PF01425: Amidase, PF00515: TPR Domain" 2 1 21 14 At5g09480 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family members At5g09530, At5g09520, At1g44222 [Arabidopsis thaliana]" 2 1 21 15 At5g09660 "malate dehydrogenase, glyoxysomal identical to SP|Q9ZP05; identical to cDNA microbody NAD-dependent malate dehydrogenase GI:3929650" 2 1 21 16 At5g09710 magnesium transporter CorA-like family protein contains Pfam profile PF01544: CorA-like Mg2+ transporter protein 2 1 21 17 At5g09890 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 2 1 21 18 At5g09930 ABC transporter family protein 2 1 21 19 At5g10070 "RNase L inhibitor protein-related contains Pfam profiles PF04034: Domain of unknown function (DUF367), PF04068: Possible metal-binding domain in RNase L inhibitor, RLI" 2 1 21 20 At5g10120 ethylene insensitive 3 family protein contains Pfam profile: PF04873 ethylene insensitive 3 2 1 21 21 At5g13260 expressed protein 2 1 21 22 At5g13300 ARF GTPase-activating domain-containing protein similar to GCN4-complementing protein (GCP1) GI:6465806 from [Arabidopsis thaliana] 2 1 21 23 At5g13480 "WD-40 repeat family protein similar to WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens}; contains 3 weak Pfam PF00400: WD domain, G-beta repeats;" 2 1 21 24 At5g13520 peptidase M1 family protein similar to SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4 hydrolase) {Homo sapiens}; contains Pfam profile PF01433: Peptidase family M1 2 1 21 25 At5g13670 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 1 22 1 At5g13730 "RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) identical to RNA polymerase sigma subunit SigD [Arabidopsis thaliana] GI:4972296, sigma-like factor [Arabidopsis thaliana] GI:3983260; contains Pfam profiles PF04545: Sigma-70, region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2" 2 1 22 2 At5g13890 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 1 22 3 At5g13950 expressed protein 2 1 22 4 At5g16710 "dehydroascorbate reductase, putative Strong similarity to dehydroascorbate reductase [Spinacia oleracea] gi:10952512 gb:AAG24945" 2 1 22 5 At5g16760 "inositol 1,3,4-trisphosphate 5/6-kinase identical to inositol 1,3,4-trisphosphate 5/6-kinase GI:3396079 from [Arabidopsis thaliana]" 2 1 22 6 At5g16890 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 1 22 7 At5g16950 expressed protein 2 1 22 8 At5g17120 hypothetical protein 2 1 22 9 At5g17180 hypothetical protein 2 1 22 10 At5g17330 glutamate decarboxylase 1 (GAD 1) sp|Q42521 2 1 22 11 At5g17390 universal stress protein (USP) family protein contains Pfam profile: PF00582 universal stress protein family 2 1 22 12 At5g19950 expressed protein 2 1 22 13 At5g20010 Ras-related GTP-binding nuclear protein (RAN-1) identical to GTP-binding nuclear protein RAN-1 SP:P41916 from [Arabidopsis thaliana] 2 1 22 14 At5g20160 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Similar to NHP2/L7Ae family proteins, see SWISSPROT:P32495 and PMID:2063628." 2 1 22 15 At5g20190 expressed protein 2 1 22 16 At5g20380 transporter-related low similarity to vesicular glutamate transporter 3 [Rattus norvegicus] GI:21685382 2 1 22 17 At5g20440 mob1/phocein family protein contains Pfam profile: PF03637 mob1/phocein family 2 1 22 18 At5g20610 expressed protein 2 1 22 19 At5g20660 "24 kDa vacuolar protein, putative similar to 24 kDa vacuolar protein VP24 [Ipomoea batatas] gi|5821406|dbj|BAA83809" 2 1 22 20 At5g23960 terpene synthase/cyclase family protein non-consensus TA donor splice site at exon 4 2 1 22 21 At5g24020 septum site-determining protein (MIND) identical to MinD [Arabidopsis thaliana] GI:6759277; contains Pfam PF00991 : ParA family ATPase 2 1 22 22 At5g24170 expressed protein 2 1 22 23 At5g24230 expressed protein 2 1 22 24 At5g24340 3'-5' exonuclease domain-containing protein contains Pfam profile PF01612: 3'-5' exonuclease 2 1 22 25 At5g24390 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain 2 1 23 1 At5g24570 expressed protein 2 1 23 2 At5g24610 expressed protein similar to unknown protein (emb|CAB62459.1) 2 1 23 3 At5g27550 "kinesin motor protein-related kinesin-like heavy chain - Arabidopsis thaliana, EMBL:AF080249" 2 1 23 4 At5g27606 hypothetical protein 2 1 23 5 At5g27780 auxin-responsive family protein similar to Auxin-induced protein 10A5 (SP:P33079) [Glycine max] 2 1 23 6 At5g27840 serine/threonine protein phosphatase PP1 isozyme 8 (TOPP8) identical to SP|O82734 Serine/threonine protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) {Arabidopsis thaliana} 2 1 23 7 At5g27990 "expressed protein predicted proteins, Saccharomyces cerevisiae and Schizosaccharomyces pombe" 2 1 23 8 At5g28050 cytidine/deoxycytidylate deaminase family protein similar to SP|O34598 Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {Bacillus subtilis}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 2 1 23 9 At5g28237 "tryptophan synthase, beta subunit, putative similar to SP|P14671 Tryptophan synthase beta chain 1, chloroplast precursor (EC 4.2.1.20) {Arabidopsis thaliana}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 2 1 23 10 At5g28300 "trihelix DNA-binding protein, putative similar to GT-2 factor [Arabidopsis thaliana GI:416490" 2 1 23 11 At5g36230 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein low similarity to SP|Q13144 Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens}; contains Pfam profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon 2 1 23 12 At5g36290 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 2 1 23 13 At5g36850 "hypothetical protein similar to At1g27780, At2g05560, At4g05280, At3g24385, At3g42590, At2g12110, At2g12100" 2 1 23 14 At5g36905 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278; contains Pfam profile PF00075: RNase H 2 1 23 15 At5g37070 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 1 23 16 At5g37130 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 1 23 17 At5g37300 expressed protein 2 1 23 18 At5g37370 pre-mRNA splicing factor PRP38 family protein (SRL1) contains Pfam profile PF03371: PRP38 family 2 1 23 19 At5g40220 MADS-box family protein contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); MADS-box protein AGL43 2 1 23 20 At5g40280 protein farnesyltransferase beta subunit (ERA1) identical to GI:8347240 [SWISS-PROT:Q38920]; WIGGUM mutant 2 1 23 21 At5g40460 expressed protein 2 1 23 22 At5g40520 expressed protein 2 1 23 23 At5g40645 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 2 1 23 24 At5g40700 "expressed protein predicted protein, Arabidopsis thaliana" 2 1 23 25 At5g40870 "uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family" 2 1 24 1 At5g40940 hypothetical protein 2 1 24 2 At5g43610 "sucrose transporter-related / sucrose-proton symporter-related similar to sucrose-proton symporter SUC1 [Arabidopsis thaliana] GI:407094, sucrose transporter [Arabidopsis thaliana] GI:12057172; contains Pfam profile PF00083: major facilitator superfamily protein" 2 1 24 3 At5g43670 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 2 1 24 4 At5g43850 "acireductone dioxygenase (ARD/ARD') family protein similar to iron-deficiency induced gene [Hordeum vulgare] GI:14522834, SIPL [Homo sapiens] GI:16551383; contains Pfam profile PF03079: ARD/ARD' family" 2 1 24 5 At5g43910 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 1 24 6 At5g44040 expressed protein similar to unknown protein (gb|AAD10667.1) 2 1 24 7 At5g44100 "casein kinase, putative similar to dual specificity kinase 1 gi|1216484|gb|AAB47968" 2 1 24 8 At5g44270 hypothetical protein 2 1 24 9 At5g44310 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to 51 kDa seed maturation protein [Glycine max] GI:414977; contains Pfam profile PF02987: Late embryogenesis abundant protein 2 1 24 10 At5g46830 basic helix-loop-helix (bHLH) family protein 2 1 24 11 At5g46880 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain 2 1 24 12 At5g47050 expressed protein 2 1 24 13 At5g47090 expressed protein 2 1 24 14 At5g47250 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 1 24 15 At5g47310 expressed protein 2 1 24 16 At5g47455 expressed protein 2 1 24 17 At5g47470 nodulin MtN21 family protein integral membrane protein domain (PF00892); similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 1 24 18 At5g50120 transducin family protein / WD-40 repeat family protein Similar to En/Spm-like transposon protein (gi:2739374)[Arabidopsis thaliana]; similar to GTP-binding regulatory protein and WD-repeat protein; contains 7 WD-40 repeats 2 1 24 19 At5g50180 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 2 1 24 20 At5g50335 expressed protein 2 1 24 21 At5g50380 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 1 24 22 At5g50560 expressed protein 2 1 24 23 At5g50610 hypothetical protein 2 1 24 24 At5g50820 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to unknown protein (pir||T07182) 2 1 24 25 At5g50860 protein kinase family protein contains PF00069: Protein kinase domain 2 1 25 1 At5g53590 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 2 1 25 2 At5g53660 expressed protein 2 1 25 3 At5g53840 F-box family protein (FBL13) contains F-box domain PF:00646 2 1 25 4 At5g53870 plastocyanin-like domain-containing protein contains similarity to SP|Q02917 Early nodulin 55-2 precursor {Glycine max}; PF02298: Plastocyanin-like domain 2 1 25 5 At5g54030 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 1 25 6 At5g54070 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 1 25 7 At5g54220 hypothetical protein 2 1 25 8 At5g54280 "myosin heavy chain, putative similar to myosin [Arabidopsis thaliana] gi|499045|emb|CAA84065" 2 1 25 9 At5g57000 expressed protein similar to unknown protein (gb|AAF21159.1) 2 1 25 10 At5g57040 lactoylglutathione lyase family protein / glyoxalase I family protein contains Pfam PF00903: glyoxalase family protein 2 1 25 11 At5g57170 macrophage migration inhibitory factor family protein / MIF family protein contains Pfam profile: PF01187 Macrophage migration inhibitory factor(MIF) 2 1 25 12 At5g57210 microtubule-associated protein-related contains some similarity to microtubule-associated protein GI:5032258 from [Arabidopsis thaliana]; contains Pfam profile PF00566: TBC domain 2 1 25 13 At5g57370 expressed protein low similarity to nucleic acid binding protein [Homo sapiens] GI:431953 2 1 25 14 At5g57440 haloacid dehalogenase-like hydrolase family protein similar to SP|Q08623 GS1 protein {Homo sapiens}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 1 25 15 At5g57600 expressed protein 2 1 25 16 At5g57650 eukaryotic translation initiation factor-related contains weak similarity to Swiss-Prot:Q38884 eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor interacting protein 1) (TRIP-1) [Arabidopsis thaliana] 2 1 25 17 At5g60190 "Ulp1 protease family protein low similarity to sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 1 25 18 At5g60230 "tRNA-splicing endonuclease, putative contains similarity to Swiss-Prot:P16658 tRNA-splicing endonuclease subunit SEN2 (tRNA-intron endonuclease) [Saccharomyces cerevisiae]; contains Pfam domain PF01974: tRNA intron endonuclease, catalytic C-terminal domain" 2 1 25 19 At5g60400 expressed protein 2 1 25 20 At5g60430 expressed protein 2 1 25 21 At5g60590 yrdC protein-related 2 1 25 22 At5g60640 "thioredoxin family protein similar to protein disulfide isomerase GI:5902592 from [Volvox carteri f. nagariensis], GI:2708314 from Chlamydomonas reinhardtii; contains Pfam profile: PF00085 Thioredoxin" 2 1 25 23 At5g60800 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain 2 1 25 24 At5g60860 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303742 from [Pisum sativum]" 2 1 25 25 At5g63540 expressed protein ; expression supported by MPSS 2 1 26 1 At5g63595 "flavonol synthase, putative similar to SP|Q96330 Flavonol synthase 1 (EC 1.14.11.-) (FLS1) from Arabidopsis thaliana" 2 1 26 2 At5g63770 "diacylglycerol kinase, putative similar to diacylglycerol kinase, theta (diglyceride kinase, DGK- theta, DAG kinase theta). [Homo sapiens] SWISS-PROT:P52824" 2 1 26 3 At5g63830 zinc finger (HIT type) family protein contains Pfam profile: PF04438 HIT zinc finger 2 1 26 4 At5g63990 "3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family" 2 1 26 5 At5g64030 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 1 26 6 At5g64200 "arginine/serine-rich splicing factor SC35 contains similarity to splicing factor; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 1 26 7 At5g64240 latex-abundant family protein (AMC3) / caspase family protein contains similarity to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain 2 1 26 8 At5g66650 "expressed protein contains Pfam domain, PF04678: Protein of unknown function, DUF607" 2 1 26 9 At5g66700 homeobox-leucine zipper family protein similar to Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (SP:Q02283) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain 2 1 26 10 At5g66850 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain; identical to cDNA MAP3K gamma protein kinase GI:2315152" 2 1 26 11 At5g66910 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 1 26 12 At5g67050 lipase class 3 family protein similar to lipase precursor [Rhizopus arrhizus] GI:6942320; contains Pfam profile PF01764: Lipase 2 1 26 13 At5g67110 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 1 26 14 At5g67260 "cyclin family protein similar to cyclin D3.1 protein [Nicotiana tabacum] GI:4160300; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 1 26 15 At5g67320 WD-40 repeat family protein strong similarity to unknown protein (ref|NP_005638.1) 2 1 26 16 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 1 26 17 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 26 18 Alien5 Control: Stratagene Spotreport Alien Oligo 2 1 26 19 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 1 26 20 atc07 Randomly generated negative control 2 1 26 21 Alien1 Control: Stratagene Spotreport Alien Oligo 2 1 26 22 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 1 26 23 atc03 Randomly generated negative control 2 1 26 24 Blank Blank 2 1 26 25 Blank Blank 2 2 1 1 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 2 1 2 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 1 3 Alien5 Control: Stratagene Spotreport Alien Oligo 2 2 1 4 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 2 1 5 atc07 Randomly generated negative control 2 2 1 6 Alien1 Control: Stratagene Spotreport Alien Oligo 2 2 1 7 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 1 8 atc03 Randomly generated negative control 2 2 1 9 At1g03470 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 2 2 1 10 At1g03540 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 1 11 At1g03730 expressed protein similar to ESTs gb|AA605440 and gb|H37232 2 2 1 12 At1g03780 targeting protein-related similar to microtubule-associated protein / targeting protein for Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to Restricted expression proliferation associated protein 100 (p100) (Differentially expressed in lung cells 2) (DIL-2) (Targeting protein for Xklp2) (C20orf1 protein) (C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo sapiens} 2 2 1 13 At1g03910 expressed protein low similarity to cactin [Drosophila melanogaster] GI:7673675; expression supported by MPSS 2 2 1 14 At1g03960 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 2 2 1 15 At1g04130 "tetratricopeptide repeat (TPR)-containing protein contains non-consensus donor splice site AT at exon 4 and acceptor splice site at exon5; Contains similarity to serine/threonine protein phosphatase gb|X83099 from S. cerevisiae, SP|O95801 Tetratricopeptide repeat protein 4 Homo sapiens; contains Pfam profile PF00515: TPR Domain" 2 2 1 16 At1g04170 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene" 2 2 1 17 At1g06810 "hypothetical protein contains Pfam PF04396: Protein of unknown function, DUF537" 2 2 1 18 At1g06890 "transporter-related low similarity to SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter {Homo sapiens}, SP|Q95YI5 UDP-sugar transporter UST74c {Drosophila melanogaster}, SP|Q18779 UDP-sugar transporter sqv-7 {Caenorhabditis elegans}; contains 8 predicted transmembrane domains" 2 2 1 19 At1g07040 expressed protein 2 2 1 20 At1g07110 "fructose-6-phosphate 2-kinase / fructose-2,6-bisphosphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098" 2 2 1 21 At1g07280 expressed protein 2 2 1 22 At1g07320 "50S ribosomal protein L4, chloroplast (CL4) identical to SP:O50061 from [Arabidopsis thaliana]" 2 2 1 23 At1g07460 "legume lectin family protein contains Legume lectins beta-chain signature, PROSITE:PS00307" 2 2 1 24 At1g07480 transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) identical to transcription factor IIA large subunit GI:2826884 from [Arabidopsis thaliana] 2 2 1 25 At1g09970 "leucine-rich repeat transmembrane protein kinase, putative Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene isoform contains a TG acceptor site at intron." 2 2 2 1 At1g10020 expressed protein 2 2 2 2 At1g10180 expressed protein 2 2 2 3 At1g10240 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 2 2 4 At1g10400 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 2 5 At1g10460 germin-like protein (GLP7) identical to germin-like protein subfamily 1 member 1 [SP|P92998]; similar to ESTs gb|T88481 and gb|AI099566 2 2 2 6 At1g10590 DNA-binding protein-related contains weak similarity to G-quartet DNA binding protein 3 [Tetrahymena thermophila] gi|4583503|gb|AAD25098 2 2 2 7 At1g10650 expressed protein 2 2 2 8 At1g13310 expressed protein 2 2 2 9 At1g13370 "histone H3, putative strong similarity to Histone H3.2, minor Medicago sativa SP|P11105, histone H3 Rubus idaeus GI:10732809; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 2 2 10 At1g13540 expressed protein 2 2 2 11 At1g13590 phytosulfokines-related similar to SP|Q9AR88 Phytosulfokines 4 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] {Oryza sativa} 2 2 2 12 At1g13780 F-box family protein contains F-box domain Pfam:PF00646 2 2 2 13 At1g13860 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 2 2 14 At1g14020 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator protein -related' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 2 2 2 15 At1g14110 xyloglucan fucosyltransferase family protein contains Pfam profile: PF03254 xyloglucan fucosyltransferase 2 2 2 16 At1g16705 p300/CBP acetyltransferase-related protein-related similar to p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] GI:12597461 2 2 2 17 At1g16760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 2 18 At1g16890 "ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 2 2 19 At1g16930 F-box family protein contains F-box domain Pfam:PF00646 2 2 2 20 At1g17120 amino acid permease family protein low similarity to SP|O43246 Cationic amino acid transporter-4 (CAT-4) {Homo sapiens}; contains Pfam profile PF00324: Amino acid permease 2 2 2 21 At1g17170 "glutathione S-transferase, putative One of three repeated putative glutathione transferases. 72% identical to glutathione transferase [Arabidopsis thaliana] (gi|4006934)" 2 2 2 22 At1g17345 auxin-responsive protein-related similar to GP:10185820 auxin-induced protein TGSAUR22 {Tulipa gesneriana} 2 2 2 23 At1g17400 hypothetical protein 2 2 2 24 At1g20290 hypothetical protein 2 2 2 25 At1g20350 "mitochondrial import inner membrane translocase subunit Tim17, putative similar to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17" 2 2 3 1 At1g20510 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to SP|P14912 and SP|P14913 from Petroselinum crispum; contains Pfam AMP-binding enzyme domain PF00501 2 2 3 2 At1g20570 tubulin family protein 2 2 3 3 At1g20710 homeobox-leucine zipper family protein similar to homeodomain protein PALE-2 (GI:20152544) [Arabidopsis thaliana]; contains Pfam profile: PF00046 homeobox domain 2 2 3 4 At1g20770 expressed protein 2 2 3 5 At1g20925 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 2 2 3 6 At1g20980 SPL1-Related2 protein (SPL1R2) strong similarity to SPL1-Related2 protein [Arabidopsis thaliana] GI:6006427; contains Pfam profile PF03110: SBP domain 2 2 3 7 At1g23670 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 2 2 3 8 At1g23710 expressed protein 2 2 3 9 At1g23860 "splicing factor RSZp21 (RSZP21) / 9G8-like SR protein (SRZ21) nearly identical to 9G8-like splicing factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21 protein [Arabidopsis thaliana] GI:2582643" 2 2 3 10 At1g23900 "gamma-adaptin, putative similar to SP|O43747 Adapter-related protein complex 1 gamma 1 subunit (Gamma-adaptin) (Clathrin assembly protein complex 1 gamma-1 large chain) {Homo sapiens}; contains Pfam profiles PF01602: Adaptin N terminal region, PF02883: Adaptin C-terminal domain" 2 2 3 11 At1g24050 expressed protein 2 2 3 12 At1g24120 "DNAJ heat shock protein, putative similar to Altered Response to Gravity [Arabidopsis thaliana] GI:4249662; contains Pfam profile PF00226 DnaJ domain" 2 2 3 13 At1g24265 expressed protein 2 2 3 14 At1g24300 GYF domain-containing protein contains Pfam profile: PF02213 GYF domain 2 2 3 15 At1g28030 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to GS-AOP loci [GI:16118889, GI:16118887, GI:16118891, GI:16118893]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 2 3 16 At1g28090 polynucleotide adenylyltransferase family protein low similarity to SP|P13685 Poly(A) polymerase (EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam profile PF01743: polyA polymerase family protein 2 2 3 17 At1g28210 "DNAJ heat shock protein, putative strong similarity to mitochondrial DnaJ protein (AtJ1) GI:564030 from [Arabidopsis thaliana]; contains Pfam profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal region, PF00684: DnaJ central domain (4 repeats); identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029" 2 2 3 18 At1g28260 expressed protein 2 2 3 19 At1g28390 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 3 20 At1g28410 expressed protein 2 2 3 21 At1g28570 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 2 2 3 22 At1g28610 "GDSL-motif lipase, putative similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif" 2 2 3 23 At1g31770 ABC transporter family protein contains Pfam profile: PF00005: ABC transporter 2 2 3 24 At1g31814 expressed protein 2 2 3 25 At1g31990 expressed protein 2 2 4 1 At1g32050 "secretory carrier membrane protein (SCAMP) family protein contains Pfam domain, PF04144: SCAMP family" 2 2 4 2 At1g32230 "WWE domain-containing protein / ceo protein, putative (CEO) contains Pfam domain, PF02825: WWE domain; identical to cDNA for ceo protein (ceo gene) GI:11044956" 2 2 4 3 At1g32280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 2 4 4 At1g32410 vacuolar protein sorting 55 family protein / VPS55 family protein contains Pfam domain PF04133: Vacuolar protein sorting 55 2 2 4 5 At1g32440 "pyruvate kinase, putative similar to pyruvate kinase isozyme G, chloroplast precursor [Nicotiana tabacum] SWISS-PROT:Q40546" 2 2 4 6 At1g36000 LOB domain family protein / lateral organ boundaries domain family protein (LBD5) identical to SP|Q9C8V8 Putative LOB domain protein 5 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 2 2 4 7 At1g36095 "hypothetical protein contains Pfam domain, PF04937: Protein of unknown function (DUF 659)" 2 2 4 8 At1g36550 hypothetical protein weak similarity to gag-pol polyprotein [Zea mays] GI:22296822 2 2 4 9 At1g36745 hypothetical protein 2 2 4 10 At1g37080 hypothetical protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 2 4 11 At1g38065 "expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator-related protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497." 2 2 4 12 At1g41770 hypothetical protein 2 2 4 13 At1g41870 hypothetical protein 2 2 4 14 At1g48230 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 2 2 4 15 At1g48290 expressed protein ; expression supported by MPSS 2 2 4 16 At1g48460 expressed protein 2 2 4 17 At1g48520 "glutamyl-tRNA(Gln) amidotransferase B family protein contains Pfam profiles: PF02934 PET112 family, N terminal region, PF02637 GatB/Yqey domain, PF01162 PET112 family, C terminal region" 2 2 4 18 At1g48650 "helicase domain-containing protein contains similarity to DEIH-box RNA/DNA helicase [Arabidopsis thaliana] GI:5881579; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain, PF00035: Double-stranded RNA binding motif" 2 2 4 19 At1g48730 expressed protein 2 2 4 20 At1g48910 flavin-containing monooxygenase family protein / FMO family protein similar to flavin monoxygenase-like protein floozy [Petunia x hybrida] GI:15010541 2 2 4 21 At1g48970 "eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to guanine nucleotide exchange factor, eIF-2B, delta subunit [Mus musculus] GI:529428; contains Pfam profile PF01008: Initiation factor 2 subunit family" 2 2 4 22 At1g51950 auxin-responsive protein / indoleacetic acid-induced protein 18 (IAA18) identical to SP|O24408|AXII_ARATH Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) {Arabidopsis thaliana} 2 2 4 23 At1g51990 "O-methyltransferase family 2 protein similar to caffeic acid O-methyltransferase GI:5031492 from [Ocimum basilicum], [SP|Q00763] [Populus tremuloides]" 2 2 4 24 At1g52155 expressed protein 2 2 4 25 At1g52230 "photosystem I reaction center subunit VI, chloroplast, putative / PSI-H, putative (PSAH2) identical to SP|Q9SUI6; similar to PSI-H precursor [Nicotiana sylvestris] GI:407355; contains Pfam profile PF03244: Photosystem I reaction centre subunit VI" 2 2 5 1 At1g52390 hypothetical protein 2 2 5 2 At1g52420 glycosyl transferase family 1 protein contains Pfam profile: PF00534 Glycosyl transferases group 1 2 2 5 3 At1g52570 phospholipase D alpha 2 / PLD alpha 2 (PLDALPHA2) (PLD2) / choline phosphatase 2 identical to phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from [Arabidopsis thaliana] 2 2 5 4 At1g52630 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; 2 2 5 5 At1g55310 "SC35-like splicing factor, 33 kD (SCL33) nearly identical to SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana] GI:9843659" 2 2 5 6 At1g55350 "calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659" 2 2 5 7 At1g55500 expressed protein contains Pfam profile PF04146: YT521-B-like family 2 2 5 8 At1g55535 expressed protein 2 2 5 9 At1g55680 WD-40 repeat family protein contains 2 (1 significant) WD-40 repeats (PF0400); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces] 2 2 5 10 At1g55730 "cation exchanger, putative (CAX5) similar to low affinity calcium antiporter CAX2 [Arabidopsis thaliana] gi|1488267|gb|AAB05914; similar to H+/Ca2+ exchanger 2 [Ipomoea nil] gi|4512263|dbj|BAA75232; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 2 2 5 11 At1g55880 "pyridoxal-5'-phosphate-dependent enzyme, beta family protein similar to SP|P50867 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme" 2 2 5 12 At1g55930 "CBS domain-containing protein / transporter associated domain-containing protein contains Pfam profiles PF00571: CBS domain, PF03471: Transporter associated domain, PF01595: Domain of unknown function" 2 2 5 13 At1g60600 UbiA prenyltransferase family protein contains Pfam profile PF01040: UbiA prenyltransferase family 2 2 5 14 At1g60660 cytochrome b5 domain-containing protein contains InterPro accession IPR001199: Cytochrome b5 2 2 5 15 At1g60850 "DNA-directed RNA polymerase, putative identical to RNA polymerase subunit [Arabidopsis thaliana] GI:514322; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain" 2 2 5 16 At1g60890 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 2 2 5 17 At1g61050 "alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162] ; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif" 2 2 5 18 At1g61095 expressed protein 2 2 5 19 At1g61255 expressed protein 2 2 5 20 At1g61310 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 5 21 At1g64065 expressed protein 2 2 5 22 At1g64110 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family" 2 2 5 23 At1g64295 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 2 5 24 At1g64350 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to nuclear pore protein SEH1 (SP:P53011) [Saccharomyces cerevisiae] 2 2 5 25 At1g64510 ribosomal protein S6 family protein similar to plastid ribosomal protein S6 precursor GB:AAF64311 GI:7582401 from [Spinacia oleracea] 2 2 6 1 At1g64570 expressed protein 2 2 6 2 At1g64750 DSS1/SEM1 family protein contains Pfam profile PF05160: DSS1/SEM1 family 2 2 6 3 At1g64790 translational activator family protein similar to HsGCN1 [Homo sapiens] GI:2282576 2 2 6 4 At1g67600 "expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963" 2 2 6 5 At1g67650 expressed protein 2 2 6 6 At1g67800 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} 2 2 6 7 At1g67840 "ATP-binding region, ATPase-like domain-containing protein contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; similar to ESTs gb|AI995396.1, dbj|AV557393.1, and dbj|AV557055.1" 2 2 6 8 At1g67970 "heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) identical to heat shock transcription factor 5 (HSF5) SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam profile: PF00447 HSF-type DNA-binding domain" 2 2 6 9 At1g68010 glycerate dehydrogenase / NADH-dependent hydroxypyruvate reductase identical to hydroxypyruvate reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant Cell Physiol 1997 Apr;38(4):449-55) 2 2 6 10 At1g68170 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 2 6 11 At1g68220 expressed protein 2 2 6 12 At1g70880 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 2 2 6 13 At1g70940 "auxin transport protein, putative (PIN3) similar to auxin transport protein [Arabidopsis thaliana] gi|5817301|gb|AAD52695" 2 2 6 14 At1g71100 ribose 5-phosphate isomerase-related similar to ribose-5-phosphate isomerase GI:18654317 from [Spinacia oleracea] 2 2 6 15 At1g71160 "beta-ketoacyl-CoA synthase family protein similar to fatty acid elongase 3-ketoacyl-CoA synthase 1 GB:AAC99312, very-long-chain fatty acid condensing enzyme CUT1 [GI:5001734]" 2 2 6 16 At1g71310 expressed protein 2 2 6 17 At1g71370 "DEAD/DEAH box helicase, putative similar to ATP-dependent RNA helicase GB:6321111 from (S. cerevisiae)" 2 2 6 18 At1g71690 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 2 2 6 19 At1g71696 "carboxypeptidase D, putative similar to carboxypeptidase D [Anas platyrhynchos] gi|2789654|gb|AAB96915" 2 2 6 20 At1g74420 "xyloglucan fucosyltransferase, putative (FUT3) identical to SP|Q9CA71 Probable fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis thaliana}; similar to SP|Q9SWH5 Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis thaliana}" 2 2 6 21 At1g74470 "geranylgeranyl reductase identical to geranylgeranyl reductase GB:Y14044 [Arabidopsis thaliana] (involvement: chlorophyll, the tocopherol and the phylloquinone pathways Eur J Biochem 1998 Jan 15;251(1-2):413-7)" 2 2 6 22 At1g74650 myb family transcription factor (cY13) similar to myb protein cY13 GI:928930 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 myb DNA-binding domain; identical to cDNA cY13 gene GI:928929 2 2 6 23 At1g74710 isochorismate synthase 1 (ICS1) / isochorismate mutase identical to GI:17223087 and GB:AF078080; contains Pfam profile PF00425: chorismate binding enzyme; contains TIGRfam profile TIGR00543: isochorismate synthases; identical to cDNA isochorismate synthase 1 precursor (ICS1) nuclear gene for plastid product GI:17223086 2 2 6 24 At1g74890 two-component responsive regulator / response regulator 15 (ARR15) identical to response regulator 15 GI:11870065 from [Arabidopsis thaliana]; contains Pfam profile: PF00072 response regulator receiver domain 2 2 6 25 At1g74940 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 2 2 7 1 At1g75110 expressed protein 2 2 7 2 At1g75170 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis] and to SEC14 cytosolic factor (SP:P53989) [Candida glabrata] 2 2 7 3 AT5G57480 PC-1 B11 2 2 7 4 3XSSC PC-1 B23 2 2 7 5 AT1G29930 PC-1 F11 2 2 7 6 3XSSC PC-1 F23 2 2 7 7 AT3G44150 PC-1 J11 2 2 7 8 3XSSC PC-1 J23 2 2 7 9 AT4G00810 PC-1 N11 2 2 7 10 3XSSC PC-1 N23 2 2 7 11 At1g77885 expressed protein 2 2 7 12 At1g77940 60S ribosomal protein L30 (RPL30B) similar to ribosomal protein L30 GI:388034 from [Homo sapiens] 2 2 7 13 At1g78110 expressed protein 2 2 7 14 At1g78170 expressed protein 2 2 7 15 At1g78320 "glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya]" 2 2 7 16 At1g78390 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris][GI:6715257]; similar to neoxanthin cleavage enzyme GI:9857290 from [Vigna unguiculata]" 2 2 7 17 At1g78570 "NAD-dependent epimerase/dehydratase family protein similar to dTDP-glucose 4,6-dehydratase from Aneurinibacillus thermoaerophilus GI:16357461, RmlB from Leptospira borgpetersenii GI:4234803; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 2 2 7 18 At1g78620 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 2 2 7 19 At2g01180 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase 2a2 [Cavia porcellus] GI:3641336; contains Pfam profile PF01569 PAP2 superfamily 2 2 7 20 At2g01220 expressed protein 2 2 7 21 At2g01360 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 7 22 At2g01420 "auxin transport protein, putative similar to auxin transport protein PIN7[Arabidopsis thaliana] gi|5817305|gb|AAD52697" 2 2 7 23 At2g01590 expressed protein 2 2 7 24 At2g01650 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 2 7 25 At2g01790 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 2 8 1 At2g01860 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 8 2 At2g05030 hypothetical protein 2 2 8 3 At2g05087 hypothetical protein 2 2 8 4 At2g05320 "beta-1,2-N-acetylglucosaminyltransferase II identical to beta-1,2-N-acetylglucosaminyltransferase II GI:10183645 from [Arabidopsis thaliana]" 2 2 8 5 At2g05400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein supported by tandem duplication of meprin and TRAF homology (MATH) domain protein (GI:4914358) (TIGR_Ath1:At2g05420) [Arabidopsis thaliana] 2 2 8 6 At2g05600 hypothetical protein 2 2 8 7 At2g05647 hypothetical protein similar to transposon-like proteins. 2 2 8 8 At2g05900 "SET domain-containing protein / YDG/SRA domain-containing protein contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain" 2 2 8 9 At2g05970 F-box family protein contains F-box domain Pfam:PF00646 2 2 8 10 At2g14080 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 8 11 At2g14120 dynamin-like protein 2b (ADL2b) identical to dynamin like protein 2b (ADL2b) [Arabidopsis thaliana] GI:19032339 2 2 8 12 At2g14455 hypothetical protein 2 2 8 13 At2g14540 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) 2 2 8 14 At2g14730 hypothetical protein 2 2 8 15 At2g14770 "Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 2 8 16 At2g14900 gibberellin-regulated family protein similar to SP|P46690 Gibberellin-regulated protein 4 precursor {Arabidopsis thaliana} GASA4; contains Pfam profile PF02704: Gibberellin regulated protein 2 2 8 17 At2g15000 expressed protein 2 2 8 18 At2g18030 peptide methionine sulfoxide reductase family protein similar to SP|P08761 Ecdysone-induced protein 28/29 kDa {Drosophila melanogaster}; contains Pfam profile PF01625: Peptide methionine sulfoxide reductase 2 2 8 19 At2g18070 hypothetical protein 2 2 8 20 At2g18230 inorganic pyrophosphatase [soluble] (PPA) / pyrophosphate phospho-hydrolase / PPase nearly identical to SP|P21216 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Arabidopsis thaliana} 2 2 8 21 At2g18260 "syntaxin-related protein, putative (SYP112) similar to SP|Q42374 Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111) {Arabidopsis thaliana}" 2 2 8 22 At2g18440 expressed protein 2 2 8 23 At2g18470 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 8 24 At2g18660 expansin family protein (EXPR3) identical to Expansin-related protein 3 precursor (Ath-ExpGamma-1.2) (Swiss-Prot:Q9ZV52) [Arabidopsis thaliana]; contains Prosite PS00092: N-6 Adenine-specific DNA methylases signature; 2 2 8 25 At2g18720 "eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative " 2 2 9 1 At2g21380 kinesin motor protein-related 2 2 9 2 At2g21430 "cysteine proteinase A494, putative / thiol protease, putative identical to SP:P43295 Probable cysteine proteinase A494 precursor [Arabidopsis thaliana]; strong similarity to cysteine proteinase RD19A (thiol protease) GI:435618, SP:P43296 from [Arabidopsis thaliana]" 2 2 9 3 At2g21620 universal stress protein (USP) family protein / responsive to dessication protein (RD2) strong similarity to RD2 protein [Arabidopsis thaliana] GI:15320408; contains Pfam profile PF00582: universal stress protein family; identical to cDNA RD2 GI:15320407 2 2 9 4 At2g21655 expressed protein contains Pfam PF05617: Arabidopsis thaliana protein of unknown function (DUF784) 2 2 9 5 At2g21860 violaxanthin de-epoxidase-related contains weak similarity to violaxanthin de-epoxidase precursor gi|1438875|gb|AAC49373 2 2 9 6 At2g21900 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 9 7 At2g22070 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 9 8 At2g22122 expressed protein 2 2 9 9 At2g25000 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 9 10 At2g25090 CBL-interacting protein kinase 16 (CIPK16) identical to CBL-interacting protein kinase 16 [Arabidopsis thaliana] gi|14009298|gb|AAK50348 2 2 9 11 At2g25270 expressed protein 2 2 9 12 At2g25320 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 2 9 13 At2g25510 expressed protein 2 2 9 14 At2g25570 expressed protein 2 2 9 15 At2g25710 holocarboxylase synthetase 1 (HCS1) identical to holocarboxylase synthetase 1 (hcs1) [Arabidopsis thaliana] GI:19698365 2 2 9 16 At2g25760 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 9 17 At2g28360 SIT4 phosphatase-associated family protein contains Pfam profile: PF04499 SIT4 phosphatase-associated protein 2 2 9 18 At2g28420 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 2 2 9 19 At2g28580 hypothetical protein contains Pfam profile PF03140: Plant protein of unknown function 2 2 9 20 At2g28625 expressed protein 2 2 9 21 At2g28800 chloroplast membrane protein (ALBINO3) Oxa1p homolog {PMID:11148275}; identical to chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] GI:2209332 2 2 9 22 At2g28850 cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae} 2 2 9 23 At2g29060 scarecrow transcription factor family protein 2 2 9 24 At2g29100 "glutamate receptor family protein (GLR2.9) plant glutamate receptor family, PMID:11379626" 2 2 9 25 At2g31790 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 10 1 At2g31830 endonuclease/exonuclease/phosphatase family protein belongs to Pfam:PF03372: Endonuclease/Exonuclease/phosphatase family; contains 4 WD-40 repeats (PF00400);similar to SP:Q01968 Inositol polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's oculocerebrorenal syndrome protein) (SP:Q01968) [Homo sapiens] 2 2 10 2 At2g31990 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 10 3 At2g32040 integral membrane transporter family protein contains 9 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae] 2 2 10 4 At2g32210 expressed protein 2 2 10 5 At2g32250 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 2 10 6 At2g32400 "glutamate receptor family protein (GLR3.7) (GLR5) identical to Glr5 [Arabidopsis thaliana] gi|6644388|gb|AAF21042; plant glutamate receptor family, PMID:11379626" 2 2 10 7 At2g32460 myb family transcription factor (MYB101) identical to putative transcription factor MYB101 GI:18087348 from [Arabidopsis thaliana] 2 2 10 8 At2g35035 urease accessory family protein (URED) contains Pfam profile: PF01774 urease accessory protein UreD 2 2 10 9 At2g35080 expressed protein ; expression supported by MPSS 2 2 10 10 At2g35240 "plastid developmental protein DAG, putative similar to plastid protein [Arabidopsis thaliana] gi|2246378|emb|CAB06698" 2 2 10 11 At2g35300 "late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein contains Pfam domain, PF03760: Late embryogenesis abundant (LEA) group 1" 2 2 10 12 At2g35490 "plastid-lipid associated protein PAP, putative similar to plastid-lipid associated protein PAP3 [Brassica rapa] GI:14248552; contains Pfam profile PF04755: PAP_fibrillin" 2 2 10 13 At2g35530 bZIP transcription factor family protein contains Pfam domain PF00170: bZIP transcription factor; similar to G-Box binding protein 2 (GI:5381313) [Catharanthus roseus]. 2 2 10 14 At2g35660 "monooxygenase family protein nearly identical to CTF2A [GI:4164576][Plant Physiol. 119, 364 (1999), PGR99-008]" 2 2 10 15 At2g35710 glycogenin glucosyltransferase (glycogenin)-related low similarity to glycogenin-2 from Homo sapiens [SP|O15488] 2 2 10 16 At2g38280 "AMP deaminase, putative / myoadenylate deaminase, putative similar to SP|P15274 AMP deaminase (EC 3.5.4.6) (Myoadenylate deaminase) {Saccharomyces cerevisiae}; contains Pfam profile PF00962: Adenosine/AMP deaminase" 2 2 10 17 At2g38340 "AP2 domain-containing transcription factor, putative (DRE2B) Similar to DREB2A (GP:3738230) and DREB2B (GP:3738232) [Arabidopsis thaliana]; DRE binding proteins may be involved in dehydration or low temp response" 2 2 10 18 At2g38500 expressed protein 2 2 10 19 At2g38570 expressed protein ; expression supported by MPSS 2 2 10 20 At2g38740 haloacid dehalogenase-like hydrolase family protein similar to SP|P71447 Beta-phosphoglucomutase (EC 5.4.2.6) {Lactococcus lactis}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 2 10 21 At2g38800 calmodulin-binding protein-related contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from [Solanum tuberosum] 2 2 10 22 At2g38890 expressed protein and genefinder 2 2 10 23 At2g38950 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 2 2 10 24 At2g41480 "peroxidase, putative similar to peroxidase [Spinacia oleracea] gi|1781334|emb|CAA71494" 2 2 10 25 At2g41520 "DNAJ heat shock N-terminal domain-containing protein contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain" 2 2 11 1 At2g41690 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 2 11 2 At2g41720 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 11 3 At2g41860 "calcium-dependent protein kinase, putative / CDPK, putative similar to calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|1399277|gb|AAB03247" 2 2 11 4 At2g41910 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 11 5 At2g42080 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI7 DnaJ homolog subfamily B member 8 (mDJ6) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain 2 2 11 6 At2g42130 expressed protein contains weak hit to Pfam PF04755: PAP_fibrillin 2 2 11 7 At2g44735 expressed protein ; expression supported by MPSS 2 2 11 8 At2g44770 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 2 11 9 At2g44930 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 2 11 10 At2g44980 "transcription regulatory protein SNF2, putative similar to SNF2P [Oryza sativa (japonica cultivar-group)] GI:23193483; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; CG donor site annotated in one isoform based on protein alignments." 2 2 11 11 At2g45150 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 2 2 11 12 At2g45200 Golgi SNARE 12 protein / Golgi SNAP receptor complex member 1 identical to Probable 28 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 1) (SP:O22151) {Arabidopsis thaliana} 2 2 11 13 At2g45403 hypothetical protein 2 2 11 14 At2g45460 forkhead-associated domain-containing protein / FHA domain-containing protein 2 2 11 15 At2g48060 hypothetical protein 2 2 11 16 At2g48110 expressed protein 2 2 11 17 At3g01060 expressed protein 2 2 11 18 At3g01090 "Snf1-related protein kinase (KIN10) (SKIN10) identical to Snf1-related protein kinase, KIN10 SP:Q38997 from [Arabidopsis thaliana]" 2 2 11 19 At3g01250 expressed protein 2 2 11 20 At3g01310 "expressed protein similar to unknown protein GB:BAA24863 [Homo sapiens], unknown protein GB:BAA20831 [Homo sapiens], unknown protein GB:AAB42264 [Caenorhabditis elegans]" 2 2 11 21 At3g01435 Expressed protein 2 2 11 22 At3g01490 "protein kinase, putative similar to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 2 11 23 At3g04050 "pyruvate kinase, putative similar to pyruvate kinase, cytosolic isozyme [Nicotiana tabacum] SWISS-PROT:Q42954" 2 2 11 24 At3g04110 "glutamate receptor family protein (GLR1.1) (GLR1) identical to putative glutamate receptor (GLR1) GB:AF079998 [Arabidopsis thaliana]; plant glutamate receptor family, PMID:11379626" 2 2 11 25 At3g04280 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain 2 2 12 1 At3g04340 "FtsH protease family protein similar to chloroplast FtsH protease [Arabidopsis thaliana] GI:1483215; contains Pfam profiles PF01434: Peptidase family M41, PF00004: ATPase AAA family" 2 2 12 2 At3g04500 RNA recognition motif (RRM)-containing protein similar to ssRNA-binding protein [Dictyostelium discoideum] GI:1546894; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 2 12 3 At3g04560 expressed protein 2 2 12 4 At3g04690 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 2 12 5 At3g04750 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 12 6 At3g07220 "transcriptional activator, putative similar to transcriptional activator FHA1 [Nicotiana tabacum] gi|15705932|gb|AAL05884" 2 2 12 7 At3g07290 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535: PPR repeat 2 2 12 8 At3g07450 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to cysteine-rich 5B protein - Lycopersicon esculentum, PIR2:S39552 [GI:415833]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 2 12 9 At3g07490 "calcium-binding protein, putative similar to calcium-binding protein GI:6580549 from [Lotus japonicus]" 2 2 12 10 At3g07620 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 12 11 At3g07680 emp24/gp25L/p24 family protein similar to SP|Q15363 Cop-coated vesicle membrane protein p24 precursor (p24A) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family 2 2 12 12 At3g07810 "heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 2 12 13 At3g07870 F-box family protein contains F-box domain Pfam:PF00646 2 2 12 14 At3g10840 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Terrabacter sp. DBF63] GI:14196240; contains Pfam profile: PF00561 alpha/beta hydrolase fold" 2 2 12 15 At3g10890 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872, (1-4)-beta-mannan endohydrolase GB:AAB87859 [Lycopersicon esculentum]; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 2 2 12 16 At3g10990 F-box family protein contains TIGRfam:TIGR01640 F-box protein interaction domain 2 2 12 17 At3g11050 "ferritin, putative similar to ferritin subunit cowpea2 precursor GI:2970654 (Vigna unguiculata); contains Pfam profile PF00210: Ferritin-like domain" 2 2 12 18 At3g11230 "yippee family protein similar to qdgl-1 [Coturnix coturnix] GI:10441650, Yippee protein [Homo sapiens] GI:5713281; contains Pfam profile PF03226: Yippee putative zinc-binding protein" 2 2 12 19 At3g11280 myb family transcription factor contains Pfam profile: PF00249 Myb-like DNA-binding domain 2 2 12 20 At3g11420 fringe-related protein similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 12 21 At3g11470 4'-phosphopantetheinyl transferase family protein contains Pfam profile PF01648: 4'-phosphopantetheinyl transferase superfamily 2 2 12 22 At3g13845 expressed protein 2 2 12 23 At3g13890 myb family transcription factor (MYB26) similar to myb-related transcription factor GI:1167486 from [Lycopersicon esculentum]; contains myb DNA binding domain: PF0049 2 2 12 24 At3g14060 expressed protein 2 2 12 25 At3g14090 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 2 13 1 At3g14220 "GDSL-motif lipase/hydrolase family protein similar to myrosinase-associated proteins GI:1769968, GI:1769970 from [Brassica napus]; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family; contains 1 predicted transmembrane domain;" 2 2 13 2 At3g14240 subtilase family protein contains similarity to SBT1 GI:1771160 from [Lycopersicon esculentum] 2 2 13 3 At3g14400 ubiquitin-specific protease 25 (UBP25) similar to GI:11993490 2 2 13 4 At3g14450 "RNA-binding protein, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies)" 2 2 13 5 At3g17030 expressed protein 2 2 13 6 At3g17100 expressed protein 2 2 13 7 At3g17225 invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 2 13 8 At3g17250 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase-2C GB:AAC36698 from [Mesembryanthemum crystallinum] 2 2 13 9 At3g17430 "phosphate translocator-related low similarity to phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275, SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}" 2 2 13 10 At3g17480 F-box family protein contains F-box domain Pfam:PF00646 2 2 13 11 At3g17611 "rhomboid family protein / zinc finger protein-related contains Pfam profiles PF01694: Rhomboid family, PF00641: Zn-finger in Ran binding protein and others" 2 2 13 12 At3g17660 human Rev interacting-like family protein / hRIP family protein similar to ARF GAP-like zinc finger-containing protein ZIGA3 GI:10441352 from [Arabidopsis thaliana]; contains InterPro accession IPR001164: Human Rev interacting-like protein (hRIP) 2 2 13 13 At3g20320 mce-related family protein contains Pfam PF02470: mce related protein 2 2 13 14 At3g20362 hypothetical protein loosely supported by Brassica genome sequence alignments. 2 2 13 15 At3g20540 "DNA-directed DNA polymerase family protein similar to PolI-like DNA polymerase [Oryza sativa] GI:19912795; contains Pfam profiles PF01612: 3'-5' exonuclease, PF00476: DNA polymerase I family A" 2 2 13 16 At3g20590 "non-race specific disease resistance protein, putative similar to non-race specific disease resistance protein [Arabidopsis thaliana] NDR1 gi|2754816|gb|AAB95208" 2 2 13 17 At3g20770 ethylene-insensitive 3 (EIN3) identical to ethylene-insensitive3 GI:2224933 from [Arabidopsis thaliana] 2 2 13 18 At3g20810 transcription factor jumonji (jmjC) domain-containing protein contains Pfam domain PF02373: jmjC domain 2 2 13 19 At3g20980 hypothetical protein 2 2 13 20 At3g21090 "ABC transporter family protein similar to ATP-binding cassette, sub-family G (WHITE), member 2 GB:NP_036050 from [Mus musculus]" 2 2 13 21 At3g23780 "DNA-directed RNA polymerase family protein similar to SP|P38420 DNA-directed RNA polymerase II 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 2) {Arabidopsis thaliana}; contains Pfam profiles PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2 domain 3, PF04566: RNA polymerase Rpb2 domain 4, PF04567: RNA polymerase Rpb2 domain 5" 2 2 13 22 At3g23830 "glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein 2, mitochondrial precursor (AtGRP2) (Swiss-Prot:Q9SVM8) [Arabidopsis thaliana]; contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 2 2 13 23 At3g24000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 13 24 At3g24060 self-incompatibility protein-related low similarity to S3 self-incompatibility protein [Papaver rhoeas] GI:1107841 2 2 13 25 At3g24210 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 2 2 14 1 At3g24255 expressed protein 2 2 14 2 At3g24440 fibronectin type III domain-containing protein contains Pfam profile PF00041: Fibronectin type III domain 2 2 14 3 At3g24500 "ethylene-responsive transcriptional coactivator, putative similar to ethylene-responsive transcriptional coactivator [Lycopersicon esculentum] gi|5669634|gb|AAD46402" 2 2 14 4 At3g27230 expressed protein 2 2 14 5 At3g27280 "prohibitin, putative strong similarity to prohibitin [Arabidopsis thaliana] GI:1946331; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 2 14 6 At3g27430 "20S proteasome beta subunit B (PBB1) identical to 20S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type;" 2 2 14 7 At3g27480 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 2 14 8 At3g27660 glycine-rich protein / oleosin identical to oleosin isoform GB:S71286 from [Arabidopsis thaliana]; identical to cDNA oleosin (isoform Atol2) GI:987013 2 2 14 9 At3g27720 zinc finger protein-related contains Pfam:PF01485 IBR domain 2 2 14 10 At3g27920 trichome differentiation protein / GLABROUS1 protein (GL1) identical to trichome differentiation protein GL1 SP:P27900 from [Arabidopsis thaliana]; contains Pfam profile: PF00249 Myb-like DNA-binding domain 2 2 14 11 At3g27970 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 2 14 12 At3g32100 hypothetical protein 2 2 14 13 At3g32180 hypothetical protein 2 2 14 14 At3g32940 expressed protein 2 2 14 15 At3g33131 hypothetical protein 2 2 14 16 At3g42140 hypothetical protein 2 2 14 17 At3g42180 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 2 14 18 At3g42440 hypothetical protein several hypothetical proteins - Arabidopsis thaliana 2 2 14 19 At3g42510 hypothetical protein 2 2 14 20 At3g45610 Dof-type zinc finger domain-containing protein identical to dof6 zinc finger protein GI:5689615 from [Arabidopsis thaliana] 2 2 14 21 At3g45670 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 2 14 22 At3g45830 expressed protein 2 2 14 23 At3g45890 "expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647" 2 2 14 24 At3g46070 "zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028" 2 2 14 25 At3g46130 myb family transcription factor (MYB48) contains Pfam profile: PF00249 myb-like DNA-binding domain 2 2 15 1 At3g46320 histone H4 nearly identical to histone H4 [Arabidopsis thaliana] GI:166740 2 2 15 2 At3g46380 hypothetical protein 2 2 15 3 At3g49170 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 15 4 At3g49230 hypothetical protein 2 2 15 5 At3g49390 "RNA-binding protein, putative RNA-binding protein RBP37, Arabidopsis thaliana, PIR:T04196" 2 2 15 6 At3g49450 F-box family protein contains F-box domain Pfam:PF00646 2 2 15 7 At3g49630 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 2 2 15 8 At3g49690 myb family transcription factor contains PFAM profile: myb DNA binding domain PF00249 2 2 15 9 At3g49870 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor-like protein 1 (SP:P40616) [Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191 Arabidopsis thaliana; contains domain PF00025: ADP-ribosylation factor family" 2 2 15 10 At3g49930 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 2 2 15 11 At3g52640 nicastrin-related contains weak similarity to Nicastrin precursor (Swiss-Prot:Q92542) [Homo sapiens] 2 2 15 12 At3g52690 "hypothetical protein predicted proteins, Arabidopsis thaliana" 2 2 15 13 At3g52830 "hypothetical protein MobA, Pseudomonas alcaligenes, EMBL:PAU88088" 2 2 15 14 At3g52890 protein kinase (KIPK) identical to protein kinase KIPK (KCBP-interacting protein kinase) [Arabidopsis thaliana] gi|7716430|gb|AAF68383 2 2 15 15 At3g53030 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 2 15 16 At3g53090 "HECT-domain-containing protein / ubiquitin-transferase family protein / IQ calmodulin-binding motif-containing protein contains Pfam profiles PF00632: HECT-domain (ubiquitin-transferase), PF00612: IQ calmodulin-binding motif" 2 2 15 17 At3g53250 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana and auxin-induced protein 6B (SP:P33083) (PIR:T10942) [Glycine max] 2 2 15 18 At3g53300 "cytochrome P450 family protein CYTOCHROME P450 71B5, Arabidopsis thaliana, SWISSPROT:C7B5_ARATH" 2 2 15 19 At3g55880 expressed protein 2 2 15 20 At3g55940 "phosphoinositide-specific phospholipase C, putative similar to phosphoinositide specific phospholipase C GI:857374 from [Arabidopsis thaliana]" 2 2 15 21 At3g56120 Met-10+ like family protein non-consensus TT donor splice site at exon 4 ; contains Pfam profile PF02475: Met-10+ like-protein 2 2 15 22 At3g56160 expressed protein 2 2 15 23 At3g56340 40S ribosomal protein S26 (RPS26C) several 40S ribosomal protein S26 2 2 15 24 At3g56400 "WRKY family transcription factor DNA-binding protein 4 WRKY4 - Nicotiana tabacum, EMBL:AF193771" 2 2 15 25 At3g56580 "zinc finger (C3HC4-type RING finger) family protein contains INTERPRO domain, IPR001841, RING finger" 2 2 16 1 At3g56640 exocyst complex subunit Sec15-like family protein contains Pfam profile PF04091: Exocyst complex subunit Sec15-like 2 2 16 2 At3g59450 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 2 2 16 3 At3g59510 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 2 2 16 4 At3g59680 expressed protein 2 2 16 5 At3g59750 "receptor lectin kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733" 2 2 16 6 At3g59890 "dihydrodipicolinate reductase family protein weak similarity to SP|Q52419 Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR) {Pseudomonas syringae}; contains Pfam profiles PF01113: Dihydrodipicolinate reductase N-terminus, PF05173: Dihydrodipicolinate reductase C-terminus" 2 2 16 7 At3g59950 autophagy 4b (APG4b) identical to autophagy 4b [Arabidopsis thaliana] gi|19912145|dbj|BAB88384 2 2 16 8 At3g60110 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 2 16 9 At3g60180 "uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP kinase) (Swiss-Prot:O04905) [Arabidopsis thaliana]" 2 2 16 10 At3g62880 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains PFam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 2 2 16 11 At3g62940 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 2 2 16 12 At3g63120 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 2 2 16 13 At3g63180 expressed protein 2 2 16 14 At3g63290 expressed protein 2 2 16 15 At3g63350 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 2 16 16 At3g63490 "ribosomal protein L1 family protein ribosomal protein L1, S.oleracea, EMBL:SORPL1" 2 2 16 17 At3g63530 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 16 18 At4g02380 "late embryogenesis abundant 3 family protein / LEA3 family protein similar to several small proteins (~100 aa) that are induced by heat, auxin, ethylene and wounding such as Phaseolus aureus indole-3-acetic acid induced protein ARG (SW:32292); contains Pfam profile PF03242: Late embryogenesis abundant protein" 2 2 16 19 At4g02425 expressed protein 2 2 16 20 At4g02570 cullin family protein similar to cullin 3 [Homo sapiens] GI:3639052; contains Pfam profile PF00888: Cullin family 2 2 16 21 At4g02630 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290" 2 2 16 22 At4g02780 copalyl diphosphate synthase / CPS / ent-kaurene synthetase A (GA1) identical to GI:571330 [PMID: 7994182]; formerly called ent-kaurene synthetase A 2 2 16 23 At4g02840 "small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative similar to small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1, Sm-D1, Sm-D autoantigen) [Mouse] SWISS-PROT:P13641" 2 2 16 24 At4g03010 "leucine-rich repeat family protein contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-0A [Lycopersicon esculentum] gi|3894385|gb|AAC78592" 2 2 16 25 At4g03070 2-oxoglutarate-dependent dioxygenase (AOP1.2) identical to GI:16118887; contains PF03171: 2OG-Fe(II) oxygenase superfamily domain 2 2 17 1 At4g07526 hypothetical protein 2 2 17 2 At4g07740 hypothetical protein 2 2 17 3 At4g08098 hypothetical protein 2 2 17 4 At4g08160 "glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain" 2 2 17 5 At4g08290 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 2 17 6 At4g08340 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 2 17 7 At4g08530 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 2 17 8 At4g08580 microfibrillar-associated protein-related similar to Microfibrillar-associated protein 1 (Associated microfibril protein) (AMF) (Swiss-Prot:P55080) [Gallus gallus] 2 2 17 9 At4g11400 "ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein / Myb-like DNA-binding domain-containing protein similar to BRG1-binding protein ELD/OSA1 [Homo sapiens] GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT DNA binding domain, PF01448: ELM2 domain, PF00249: Myb-like DNA-binding domain" 2 2 17 10 At4g11460 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 17 11 At4g11660 heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) identical to heat shock factor protein 7 (HSF7) SP:Q9T0D3 from [Arabidopsis thaliana] 2 2 17 12 At4g11720 hypothetical protein 2 2 17 13 At4g11880 MADS-box protein (AGL14) nearly identical to MADS-box protein AGL14 GI:862644 2 2 17 14 At4g11940 hypothetical protein predicted proteins Arabidopsis thaliana 2 2 17 15 At4g12080 "DNA-binding family protein contains a AT hook motif (DNA binding motifs with a preference for A/T rich regions), Pfam:PF02178" 2 2 17 16 At4g12140 "zinc finger (C3HC4-type RING finger) family protein low similarity to RING-H2 finger proteins RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 2 2 17 17 At4g14700 "replication control protein, putative similar to origin recognition complex subunit 1 (Replication control protein 1) [Homo sapiens] SWISS-PROT:Q13415" 2 2 17 18 At4g14730 transmembrane protein-related low similarity to transmembrane protein OTMP [Ovis aries] GI:9965379 2 2 17 19 At4g14880 cysteine synthase / O-acetylserine (thiol)-lyase / O-acetylserine sulfhydrylase (OAS1) nearly identical to SP|P47998 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA O-acetylserine lyase (At.OAS.5-8) GI:6983573 2 2 17 20 At4g14920 "PHD finger transcription factor, putative " 2 2 17 21 At4g15056 hypothetical protein 2 2 17 22 At4g15093 catalytic LigB subunit of aromatic ring-opening dioxygenase family contains Pfam PF02900: Catalytic LigB subunit of aromatic ring-opening dioxygenase 2 2 17 23 At4g15240 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 17 24 At4g15300 cytochrome P450 family protein similar to Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066) [Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450 2 2 17 25 At4g17760 expressed protein 2 2 18 1 At4g17810 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 2 18 2 At4g17990 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 2 2 18 3 At4g18020 pseudo-response regulator 2 (APRR2) (TOC2) identical to pseudo-response regulator 2 GI:7576356 from [Arabidopsis thaliana] 2 2 18 4 At4g18190 "purine permease family protein similar to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250" 2 2 18 5 At4g18250 "receptor serine/threonine kinase, putative similar to to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208" 2 2 18 6 At4g18375 KH domain-containing protein contains similarity to RNA-binding KH-domains PF:00013 2 2 18 7 At4g18420 hypothetical protein 2 2 18 8 At4g21210 expressed protein contains Pfam domain PF03618: Domain of unknown function (DUF299) 2 2 18 9 At4g21240 F-box family protein contains F-box domain Pfam:PF00646 2 2 18 10 At4g21410 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 2 18 11 At4g21450 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 2 2 18 12 At4g21600 "bifunctional nuclease, putative similar to bifunctional nuclease [Zinnia elegans] gi|4099833|gb|AAD00694" 2 2 18 13 At4g21660 "proline-rich spliceosome-associated (PSP) family protein similar to SP|Q13435 Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) {Homo sapiens}; contains Pfam profiles PF04046: PSP, PF04037: Domain of unknown function (DUF382)" 2 2 18 14 At4g21840 "methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein weak similarity to pilin-like transcription factor [Homo sapiens] GI:5059062, SP|P14930 Peptide methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6) {Neisseria gonorrhoeae}; contains Pfam profile PF01641: SelR domain" 2 2 18 15 At4g21870 "26.5 kDa class P-related heat shock protein (HSP26.5-P) contains Pfam profile: PF00011 Hsp20/alpha crystallin family: identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237." 2 2 18 16 At4g24440 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) identical to transcription initiation factor IIA gamma chain SP:Q39236 from [Arabidopsis thaliana]; 2 2 18 17 At4g24470 "zinc finger (GATA type) protein ZIM (ZIM) identical to zinc-finger protein expressed in Inflorescence Meristem, ZIM gi:8918533 from [Arabidopsis thaliana]" 2 2 18 18 At4g24620 "glucose-6-phosphate isomerase, putative similar to glucose-6-phosphate isomerase [Spinacia oleracea] GI:3413511; contains Pfam profile PF00342: glucose-6-phosphate isomerase" 2 2 18 19 At4g24670 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 2 2 18 20 At4g24810 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 18 21 At4g24890 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 2 18 22 At4g25040 integral membrane family protein contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 2 2 18 23 At4g25100 "superoxide dismutase [Fe], chloroplast (SODB) / iron superoxide dismutase (FSD1) identical to Fe-superoxide dismutase [Arabidopsis thaliana] gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935" 2 2 18 24 At4g27657 expressed protein 2 2 18 25 At4g27710 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 2 2 19 1 At4g27870 integral membrane family protein contains Pfam PF01988: Integral membrane protein 2 2 19 2 At4g27920 expressed protein various predicted proteins 2 2 19 3 At4g28070 AFG1-like ATPase family protein contains Pfam profile: PF03969 AFG1-like ATPase 2 2 19 4 At4g28110 myb family transcription factor (MYB41) contains PFAM profile: myb DNA binding protein PF00249 2 2 19 5 At4g28280 expressed protein 2 2 19 6 At4g28320 "glycosyl hydrolase family 5 protein / cellulase family protein mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) - tomato, PIR2:T04323" 2 2 19 7 At4g30940 potassium channel tetramerisation domain-containing protein contains Pfam profile PF02214: K+ channel tetramerisation domain 2 2 19 8 At4g30993 expressed protein 2 2 19 9 At4g31115 expressed protein supported by full length cDNA gi:21436034 from [Arabidopsis thaliana] 2 2 19 10 At4g31150 endonuclease V family protein contains Pfam PF04493: Endonuclease V 2 2 19 11 At4g31330 "expressed protein contains Pfam profile PF04654: Protein of unknown function, DUF599" 2 2 19 12 At4g31390 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 19 13 At4g31550 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 19 14 At4g31580 "splicing factor RSZp22 (RSZP22) / 9G8-like SR protein (SRZ22) identical to RSZp22 protein [Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like SR protein [Arabidopsis thaliana] GI:3435094; contains Pfam profiles PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) and PF00098: Zinc knuckle; identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093" 2 2 19 15 At4g34100 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 19 16 At4g34138 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 2 19 17 At4g34265 expressed protein 2 2 19 18 At4g34310 expressed protein 2 2 19 19 At4g34460 "guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994)" 2 2 19 20 At4g34520 fatty acid elongase 1 (FAE1) identical to fatty acid elongase 1 [GI:881615] 2 2 19 21 At4g34690 hypothetical protein 2 2 19 22 At4g34750 "auxin-responsive protein, putative / small auxin up RNA (SAUR_E) contains similarity to indole-3-acetic acid induced protein ARG7 SP:P32295 from [Phaseolus aureus]" 2 2 19 23 AT5G57480 PC-1 B11 2 2 19 24 3XSSC PC-1 B23 2 2 19 25 AT1G29930 PC-1 F11 2 2 20 1 3XSSC PC-1 F23 2 2 20 2 AT3G44150 PC-1 J11 2 2 20 3 3XSSC PC-1 J23 2 2 20 4 AT4G00810 PC-1 N11 2 2 20 5 3XSSC PC-1 N23 2 2 20 6 At4g37380 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 20 7 At4g37440 expressed protein 2 2 20 8 At4g37620 hypothetical protein 2 2 20 9 At4g37670 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 from Escherichia coli ; contains Pfam profile PF00696: Amino acid kinase family 2 2 20 10 At4g37830 "cytochrome c oxidase-related contains weak similarity to cytochrome c oxidase polypeptide VIa-liver, mitochondrial precursor (EC 1.9.3.1) (Swiss-Prot:P10818) [Rattus norvegicus]" 2 2 20 11 At4g37890 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 2 20 12 At4g38060 expressed protein 2 2 20 13 At4g38100 expressed protein 2 2 20 14 At5g01520 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 2 2 20 15 At5g01560 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 2 20 16 At5g01710 expressed protein 2 2 20 17 At5g01750 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 2 2 20 18 At5g01930 "(1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)" 2 2 20 19 At5g01990 "auxin efflux carrier family protein contains auxin efflux carrier domain, Pfam:PF03547" 2 2 20 20 At5g02130 "expressed protein kinesin light chain - Plectonema boryanum, EMBL:U78597" 2 2 20 21 At5g02190 aspartyl protease family protein contains Pfam profile PF00026: Eukaryotic aspartyl protease 2 2 20 22 At5g04940 "SET domain-containing protein (SUVH1) contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain; identical to cDNA SUVH1 (SUVH1) GI:13517742" 2 2 20 23 At5g04990 sad1/unc-84 protein-related contains weak similarity to Sad1/unc-84 protein-like 1 (Swiss-Prot:O94901) [Homo sapiens] 2 2 20 24 At5g05140 "transcription elongation factor-related low similarity to transcription elongation factor TFIIS.h [Mus musculus] GI:3288547, elongin A [Mus musculus] GI:6009624" 2 2 20 25 At5g05200 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 2 2 21 1 At5g05350 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; expression supported by MPSS" 2 2 21 2 At5g05390 "laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960]" 2 2 21 3 At5g05550 expressed protein similar to 6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum] GI:18149189 2 2 21 4 At5g05590 phosphoribosylanthranilate isomerase 2 (PAI2) identical to gi:619747 2 2 21 5 At5g08240 expressed protein 2 2 21 6 At5g08300 "succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative identical to SP|P53586 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) {Arabidopsis thaliana}; strong similarity to SP|P13086 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor {Rattus norvegicus}; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 2 2 21 7 At5g08440 expressed protein 2 2 21 8 At5g08480 VQ motif-containing protein contains PF05678: VQ motif 2 2 21 9 At5g08620 "DEAD box RNA helicase (RH25) identical to RNA helicase [Arabidopsis thaliana] GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 2 2 21 10 At5g08680 "ATP synthase beta chain, mitochondrial, putative strong similarity to SP|P83483 ATP synthase beta chain 1, mitochondrial precursor (EC 3.6.3.14) {Arabidopsis thaliana}, SP|P17614 ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana plumbaginifolia}; contains Pfam profiles PF00006: ATP synthase alpha/beta family nucleotide-binding domain, PF00306: ATP synthase ab C terminal, PF02874: ATP synthase alpha/beta family beta-barrel domain" 2 2 21 11 At5g09240 transcriptional coactivator p15 (PC4) family protein similar to SP|P11031 Activated RNA polymerase II transcriptional coactivator p15 precursor (PC4) (p14) (Single-stranded DNA binding protein p9) {Mus musculus}; contains Pfam profile PF02229: Transcriptional Coactivator p15 (PC4) 2 2 21 12 At5g09280 pectate lyase family protein similar to major pollen allergen Cup a 1 SP:Q9SCG9 from [Cupressus arizonica] 2 2 21 13 At5g12040 "carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family" 2 2 21 14 At5g12080 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel 2 2 21 15 At5g12250 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} 2 2 21 16 At5g12310 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 2 21 17 At5g12460 fringe-related protein similarity to predicted proteins + similar to hypothetical protein GB:AAC23643 [Arabidopsis thaliana] + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 2 21 18 At5g12860 "oxoglutarate/malate translocator, putative similar to 2-oxoglutarate/malate translocator precursor, spinach, SWISSPROT:Q41364" 2 2 21 19 At5g13050 5-formyltetrahydrofolate cyclo-ligase (5-FCL) nearly identical to gi:22087553 2 2 21 20 At5g13110 "glucose-6-phosphate 1-dehydrogenase, putative / G6PD, putative similar to SP|Q43839 Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) {Solanum tuberosum}; contains Pfam profiles PF02781: Glucose-6-phosphate dehydrogenase C-terminal, PF00479: Glucose-6-phosphate dehydrogenase NAD binding domain" 2 2 21 21 At5g15850 zinc finger protein CONSTANS-LIKE 1 (COL1) identical to Zinc finger protein CONSTANS-LIKE 1 SP:O50055 from [Arabidopsis thaliana] 2 2 21 22 At5g15890 expressed protein 2 2 21 23 At5g16070 "chaperonin, putative similar to SWISS-PROT:P80317 T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 2 2 21 24 At5g16130 "40S ribosomal protein S7 (RPS7C) 40S ribosomal protein S7 homolog - Brassica oleracea, EMBL:AF144752" 2 2 21 25 At5g16290 "acetolactate synthase small subunit, putative similar to gi:5931761 from Nicotiana plumbaginifolia" 2 2 22 1 At5g16330 NC domain-containing protein contains Pfam profile PF04970: NC domain 2 2 22 2 At5g16490 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 2 2 22 3 At5g16540 "zinc finger (CCCH-type) family protein identical to zinc finger protein 3 [Arabidopsis thaliana] gi|4689376|gb|AAD27875; contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 2 2 22 4 At5g19110 extracellular dermal glycoprotein-related / EDGP-related similar to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741 2 2 22 5 At5g19170 "expressed protein predicted proteins, Arabidopsis thaliana contains Pfam profile PF03080: Arabidopsis proteins of unknown function" 2 2 22 6 At5g19330 "armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651" 2 2 22 7 At5g19370 "rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein low similarity to MPT-synthase sulfurylase [Synechococcus sp. PCC 7942] GI:2950364; contains Pfam profiles PF00581: Rhodanese-like domain, PF00639: PPIC-type PPIASE domain; identical to cDNA peptidyl-prolyl cis-trans isomerase GI:2246379" 2 2 22 8 At5g19530 spermine/spermidine synthase family protein similar to SP|P09158 Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) {Escherichia coli}; contains Pfam profile PF01564: Spermine/spermidine synthase 2 2 22 9 At5g19590 "expressed protein contains Pfam profile PF04398: Protein of unknown function, DUF538" 2 2 22 10 At5g19770 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} 2 2 22 11 At5g19830 peptidyl-tRNA hydrolase family protein contains Pfam profile PF01195: peptidyl-tRNA hydrolase 2 2 22 12 At5g23150 PWWP domain-containing protein identical to cDNA putative transcription factor (HUA2) GI:4868119; contains Pfam profile PF00855: PWWP domain 2 2 22 13 At5g23210 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II chains A and B (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)]; 2 2 22 14 At5g23350 "GRAM domain-containing protein / ABA-responsive protein-related contains similarity to ABA-responsive protein in barley (GI:4103635) [Hordeum vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam PF02893: GRAM domain" 2 2 22 15 At5g23400 "disease resistance family protein / LRR family protein similar to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591; contains leucine rich-repeat domain Pfam:PF00560, INTERPRO:IPR001611" 2 2 22 16 At5g23535 KOW domain-containing protein simlar to SP|P12876 50S ribosomal protein L24 (BL23) (12 kDa DNA-binding protein) (HPB12) {Bacillus subtilis}; contains Pfam profile PF00467: KOW motif 2 2 22 17 At5g23590 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|P39101 CAJ1 protein Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain 2 2 22 18 At5g23760 heavy-metal-associated domain-containing protein Pfam profile PF00403: Heavy-metal-associated domain 2 2 22 19 At5g23820 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 2 2 22 20 At5g26670 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 2 2 22 21 At5g26630 "MADS-box protein (AGL35) homeotic protein boi1AP3, Brassica oleracea, EMBL:U67453; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain)" 2 2 22 22 At5g26805 expressed protein 2 2 22 23 At5g26860 "Lon protease homolog 2, mitochondrial almost identical to Lon protease homolog 2 mitochondrial precursor SP:P93655, GI:1848290 from [Arabidopsis thaliana]" 2 2 22 24 At5g27050 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 2 22 25 At5g27110 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 2 23 1 At5g27310 expressed protein 2 2 23 2 At5g27370 hypothetical protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 2 2 23 3 At5g35410 "CBL-interacting protein kinase 24 (CIPK24) / serine/threonine protein kinase (SOS2) identical to CBL-interacting protein kinase 24 [Arabidopsis thaliana] GP|14701910|gb|AAK72257, serine/threonine protein kinase SOS2 [Arabidopsis thaliana] GI:7453645" 2 2 23 4 At5g35480 expressed protein 2 2 23 5 At5g35620 eukaryotic translation initiation factor 4E 2 / eIF-4E2 / mRNA cap-binding protein 2 (EIF4E2) identical to SP|O04663 Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(ISO)4F P28 subunit) (eIF4Eiso protein) {Arabidopsis thaliana} 2 2 23 6 At5g35670 "calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612" 2 2 23 7 At5g35794 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 2 23 8 At5g35870 hypothetical protein similar to unknown protein (gb|AAD25831.1) 2 2 23 9 At5g36030 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; simlar to At4g19310, At5g36030" 2 2 23 10 At5g36080 hypothetical protein 2 2 23 11 At5g39290 "expansin, putative (EXP26) similar to alpha-expansin 4 precursor GI:16923355 from [Cucumis sativus]; alpha-expansin gene family, PMID:11641069" 2 2 23 12 At5g39350 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 23 13 At5g39530 "expressed protein hypothetical protein, Synechocystis sp., PIR:S77152" 2 2 23 14 At5g39590 expressed protein 2 2 23 15 At5g39770 repair endonuclease family protein contains Pfam PF02732 : ERCC4 domain; similar to MUS81 endonuclease (GI:16755674) [Mus musculus]; similar to repair endonuclease (TIGR:At5g41150) [Arabidopsis thaliana] 2 2 23 16 At5g39830 "DegP protease, putative contains similarity to DegP protease precursor GI:2565436 from [Arabidopsis thaliana]" 2 2 23 17 At5g39990 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 2 2 23 18 At5g40050 F-box family protein contains F-box domain Pfam:PF00646 2 2 23 19 At5g42820 "U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary factor, small subunit [Oryza sativa] GI:3850816" 2 2 23 20 At5g42850 expressed protein 2 2 23 21 At5g42965 hypothetical protein 2 2 23 22 At5g43020 "leucine-rich repeat transmembrane protein kinase, putative " 2 2 23 23 At5g43185 Expressed protein 2 2 23 24 At5g43240 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 2 2 23 25 At5g43405 hypothetical protein 2 2 24 1 At5g43460 "lesion inducing protein-related similar to ORF, able to induce HR-like lesions [Nicotiana tabacum]" 2 2 24 2 At5g46040 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 2 2 24 3 At5g46100 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 2 24 4 At5g46210 "cullin, putative similar to SP|Q13619 Cullin homolog 4A (CUL-4A) {Homo sapiens}; contains Pfam profile PF00888: Cullin family" 2 2 24 5 At5g46250 RNA recognition motif (RRM)-containing protein contains similarity to RNA-binding protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 2 24 6 At5g46410 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 2 24 7 At5g46450 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 2 24 8 At5g46630 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 2 2 24 9 At5g46670 "CHP-rich zinc finger protein, putative contains similarity to CHP-rich zinc finger protein" 2 2 24 10 At5g49290 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 2 2 24 11 At5g49360 glycosyl hydrolase family 3 protein 2 2 24 12 At5g49520 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 2 2 24 13 At5g49560 expressed protein similar to SP|P40389 Rapid response to glucose protein 1 {Schizosaccharomyces pombe} 2 2 24 14 At5g49710 expressed protein similar to unknown protein (pir||T05575) 2 2 24 15 At5g49750 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596" 2 2 24 16 At5g49930 "zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle" 2 2 24 17 At5g49970 pyridoxamine 5'-phosphate oxidase-related contains weak similarity to Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx). (Swiss-Prot:P28225) [Shigella flexneri] 2 2 24 18 At5g52720 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 2 2 24 19 At5g52780 expressed protein similar to unknown protein (pir||T04431) 2 2 24 20 At5g52960 expressed protein similar to unknown protein (pir |S77140) 2 2 24 21 At5g53000 protein phosphatase 2A-associated 46 kDa protein / PP2A regulatory subunit (TAP46) identical to PP2A regulatory subunit (46 kDa protein phosphatase 2A-associated protein) (TAP46) [Arabidopsis thaliana] GI:5107033; contains Pfam profile PF04177: TAP42-like family 2 2 24 22 At5g53150 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226: DnaJ domain 2 2 24 23 At5g53200 myb family transcription factor (TRIPTYCHON) contains Pfam profile: PF00249 myb-like DNA-binding domain 2 2 24 24 At5g53380 hypothetical protein 2 2 24 25 At5g53440 expressed protein 2 2 25 1 At5g56100 glycine-rich protein / oleosin contains Pfam PF01277: Oleosin domain 2 2 25 2 At5g56160 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to similar to phosphatidylinositol transfer-like protein IV (GI:14486707) [Lotus japonicus] and SEC14 cytosolic factor (SP:P45816) [Candida lipolytica] 2 2 25 3 At5g56320 "expansin, putative (EXP14) similar to alpha-expansin 3 GI:6942322 from [Triphysaria versicolor]; alpha-expansin gene family, PMID:11641069" 2 2 25 4 At5g56370 F-box family protein contains F-box domain Pfam:PF00646 2 2 25 5 At5g56540 arabinogalactan-protein (AGP14) identical to gi|10880505|gb|AAG24282 2 2 25 6 At5g56600 profilin 5 (PRO5) (PRF3) identical to SP|Q9FE63 Profilin 5 {Arabidopsis thaliana} 2 2 25 7 At5g56780 expressed protein contains similarity to transcription repressor 2 2 25 8 At5g56850 expressed protein 2 2 25 9 At5g59370 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} 2 2 25 10 At5g59410 expressed protein 2 2 25 11 At5g59560 sensitivity to red light reduced protein (SRR1) identical to sensitivity to red light reduced protein [Arabidopsis thaliana] GI:25527089; supporting cDNA gi|25527088|gb|AY127047.1| 2 2 25 12 At5g59613 expressed protein 2 2 25 13 At5g59800 methyl-CpG-binding domain-containing protein contains Pfam profile PF01429: Methyl-CpG binding domain 2 2 25 14 At5g59845 gibberellin-regulated family protein similar to SP|P27057 GAST1 protein precursor {Lycopersicon esculentum}; contains Pfam profile PF02704: Gibberellin regulated protein 2 2 25 15 At5g59960 expressed protein 2 2 25 16 At5g60020 "laccase, putative / diphenol oxidase, putative similar to laccase LAC2-4, Liriodendron tulipifera, EMBL:LTU73106 [GI:1621467]" 2 2 25 17 At5g62710 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 2 25 18 At5g62750 "expressed protein predicted proteins, Caenorhabditis elegans" 2 2 25 19 At5g62910 "expressed protein predicted proteins, Arabidopsis thaliana" 2 2 25 20 At5g62970 F-box family protein contains F-box domain Pfam:PF00646 2 2 25 21 At5g63110 "histone deacetylase, putative similar to SP|O22446 Histone deacetylase (HD) {Arabidopsis thaliana}; contains Pfam profile PF00850: Histone deacetylase family" 2 2 25 22 At5g63140 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 2 25 23 At5g63330 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 2 25 24 At5g63400 adenylate kinase identical to adenylate kinase (ATP-AMP transphosphorylase) [Arabidopsis thaliana] SWISS-PROT:O82514 2 2 25 25 At5g65940 3-hydroxyisobutyryl-coenzyme A hydrolase / CoA-thioester hydrolase (CHY1) identical to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 2 2 26 1 At5g66000 expressed protein 2 2 26 2 At5g66055 ankyrin repeat protein / AKRP (AKR) identical to ankyrin repeat protein (AKRP) [Arabidopsis thaliana] SWISS-PROT:Q05753 2 2 26 3 At5g66110 heavy-metal-associated domain-containing protein similar to farnesylated protein TFP6 [GI:4097553]; contains Heavy-metal-associated domain PF00403 2 2 26 4 At5g66250 kinectin-related contains weak similarity to kinectin (GI:3766232) [Vulpes vulpes] 2 2 26 5 At5g66280 "GDP-D-mannose 4,6-dehydratase, putative strong similarity to GDP-D-mannose-4,6-dehydratase [Arabidopsis thaliana] GI:1764100" 2 2 26 6 At5g66420 expressed protein 2 2 26 7 At5g66480 expressed protein similar to unknown protein (pir||T08412) 2 2 26 8 3xSSC 3xSSC 2 2 26 9 3xSSC 3xSSC 2 2 26 10 3xSSC 3xSSC 2 2 26 11 3xSSC 3xSSC 2 2 26 12 3xSSC 3xSSC 2 2 26 13 3xSSC 3xSSC 2 2 26 14 3xSSC 3xSSC 2 2 26 15 3xSSC 3xSSC 2 2 26 16 At5g49910 heat shock protein 70 / HSP70 (HSC70-7) identical to heat shock protein 70 [Arabidopsis thaliana] GI:6746592 2 2 26 17 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 26 18 Alien5 Control: Stratagene Spotreport Alien Oligo 2 2 26 19 At1g64740 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} 2 2 26 20 atc07 Randomly generated negative control 2 2 26 21 Alien1 Control: Stratagene Spotreport Alien Oligo 2 2 26 22 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 2 2 26 23 atc03 Randomly generated negative control 2 2 26 24 Blank Blank 2 2 26 25 Blank Blank 2 3 1 1 atc05 Randomly generated negative control 2 3 1 2 atc11 Randomly generated negative control 2 3 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 2 3 1 4 atc01 Randomly generated negative control 2 3 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 2 3 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 3 1 7 atc09 Randomly generated negative control 2 3 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 2 3 1 9 At1g01140 CBL-interacting protein kinase 9 (CIPK9) identical to CBL-interacting protein kinase 9 [Arabidopsis thaliana] gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 2 3 1 10 At1g01180 expressed protein 2 3 1 11 At1g01370 "centromeric histone H3 HTR12 (HTR12) similar to histone H3 GB:X17141 GI:10795 from Tetrahymena pyriformis, GI:161790 from Tetrahymena thermophila; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 3 1 12 At1g01430 expressed protein similar to hypothetical protein GB:CAB80917 GI:7267605 from [Arabidopsis thaliana] 2 3 1 13 At1g01600 "cytochrome P450, putative similar to cytochrome P450 GI:10442763 from [Triticum aestivum]" 2 3 1 14 At1g01650 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 2 3 1 15 At1g01820 peroxisomal biogenesis factor 11 family protein / PEX11 family protein contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) 2 3 1 16 At1g01910 "anion-transporting ATPase, putative similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase" 2 3 1 17 At1g04470 expressed protein EST gb|ATTS5672 comes from this gene 2 3 1 18 At1g04530 expressed protein 2 3 1 19 At1g04650 hypothetical protein 2 3 1 20 At1g04710 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase" 2 3 1 21 At1g04890 "hypothetical protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 2 3 1 22 At1g04950 TATA box-binding protein-associated factor (TAF) family protein contains Pfam profile: PF02969 TATA box binding protein associated factor 2 3 1 23 At1g05085 hypothetical protein 2 3 1 24 At1g05160 "ent-kaurenoic acid hydroxylase (KAO1) / cytochrome P450 88A3, putative (CYP88A3) identical to Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana]; nearly identical to ent-kaurenoic acid hydroxylase (KAO1) GI:13021852 from [Arabidopsis thaliana]" 2 3 1 25 At1g07725 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit; 2 3 2 1 At1g07770 "40S ribosomal protein S15A (RPS15aA) identical to GB:AAA61608 from [Arabidopsis thaliana] (Plant Physiol. 106 (1), 401-402 (1994))" 2 3 2 2 At1g07880 "mitogen-activated protein kinase, putative / MAPK, putative (MPK13) mitogen-activated protein kinase (MAPK)(AtMPK13), PMID:12119167; similar to GB:CAB37188 from [Medicago sativa]" 2 3 2 3 At1g07930 "elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990))" 2 3 2 4 At1g08050 "zinc finger (C3HC4-type RING finger) family protein low similarity to SP|P79263 Inter-alpha-trypsin inhibitor heavy chain H4 precursor {Sus scrofa}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 3 2 5 At1g08100 high-affinity nitrate transporter (ACH2) identical to high-affinity nitrate transporter ACH2 [Arabidopsis thaliana] GI:3608364 2 3 2 6 At1g08250 prephenate dehydratase family protein contains similarity to prephenate dehydratase GI:1008717 from [Amycolatopsis methanolica] 2 3 2 7 At1g08290 "zinc finger (C2H2 type) protein (WIP3) identical to WIP3 protein [Arabidopsis thaliana] gi|18027014|gb|AAL55723; contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 2 8 At1g10840 eukaryotic translation initiation factor 3 subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to SP|Q9C5Z2 Eukaryotic translation initiation factor 3 subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) {Arabidopsis thaliana}; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family 2 3 2 9 At1g10920 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 2 10 At1g11100 "SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related similar to RUSH-1alpha [Oryctolagus cuniculus] GI:1655930; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 2 3 2 11 At1g11170 expressed protein contains Pfam profile PF05212: Protein of unknown function (DUF707) 2 3 2 12 At1g11320 expressed protein identical to hypothetical protein GB:AAD49990 GI:5734725 from [Arabidopsis thaliana] 2 3 2 13 At1g11360 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family domain; similar to ethylene-responsive ER6 protein (GI:5669654) [Lycopersicon esculentum] 2 3 2 14 At1g11510 DNA-binding storekeeper protein-related similar to storekeeper protein GI:14268476 [Solanum tuberosum] 2 3 2 15 At1g11570 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 2 3 2 16 At1g14340 RNA recognition motif (RRM)-containing protein 2 3 2 17 At1g14390 "leucine-rich repeat transmembrane protein kinase, putative similar to putative receptor-like protein kinase GI:2947063 from [Arabidopsis thaliana]" 2 3 2 18 At1g14540 "anionic peroxidase, putative similar to lignin forming anionic peroxidase [Nicotiana sylvestris] SWISS-PROT: Q02200" 2 3 2 19 At1g14600 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 2 3 2 20 At1g14740 expressed protein 2 3 2 21 At1g14780 expressed protein 2 3 2 22 At1g14930 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:20810] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 2 3 2 23 At1g14990 expressed protein 2 3 2 24 At1g17680 "transcription factor-related low similarity to SP|P33339 Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) Saccharomyces cerevisiae, transcription factor IIIC102 short isoform [Homo sapiens] GI:18481637" 2 3 2 25 At1g17720 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 2 3 3 1 At1g17850 expressed protein 2 3 3 2 At1g17910 "wall-associated kinase, putative contains similarity to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]" 2 3 3 3 At1g18090 "exonuclease, putative similar to Swiss-Prot:P53695 exonuclease I (EXO I) [Schizosaccharomyces pombe]" 2 3 3 4 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains Pfam profile: PF00254 FKBP-type peptidyl-prolyl cis-trans isomerases 2 3 3 5 At1g18340 basal transcription factor complex subunit-related similar to TFIIH basal transcription factor complex p34 subunit (Basic transcription factor 2 34 kDa subunit) (BTF2-p34) (General transcription factor IIH polypeptide 3) (SP:Q8VD76) {Mus musculus}; contains Pfam PF03850: Transcription factor Tfb4 2 3 3 6 At1g18400 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 3 7 At1g21310 "proline-rich extensin-like family protein contains extensin-like region, Pfam:PF04554" 2 3 3 8 At1g21340 Dof-type zinc finger domain-containing protein contains similaity to DNA-binding protein GB:X66076 GI:517257 from [Zea mays] 2 3 3 9 At1g21520 expressed protein 2 3 3 10 At1g21580 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 3 11 At1g21740 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 2 3 3 12 At1g21780 "BTB/POZ domain-containing protein Contains similarity to gb|AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF|00651 BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221, gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come from this gene;supported by full-length" 2 3 3 13 At1g21970 "CCAAT-box binding transcription factor (LEC1) similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; identical to GB:AAC39488 GI:3282674 from [Arabidopsis thaliana] (Cell 93 (7), 1195-1205 (1998)); identified in Plant Cell 2003 Jan;15(1):5-18; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 2 3 3 14 At1g22020 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 2 3 3 15 At1g24590 "AP2 domain-containing transcription factor, putative contains AP2 DNA-binding domain" 2 3 3 16 At1g24706 expressed protein 2 3 3 17 At1g25270 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 3 3 18 At1g25300 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to unknown protein GI:4262226 from [Arabidopsis thaliana] contains Pfam profile PF00564: PB1 domain 2 3 3 19 At1g25460 "oxidoreductase family protein similar to dihydroflavonol 4-reductase GI:1332411 from [Rosa hybrida], cinnamoyl CoA reductase from Pinus taeda [gi:17978649], Eucalyptus gunnii [gi:2058311]" 2 3 3 20 At1g25510 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 2 3 3 21 At1g26160 metal-dependent phosphohydrolase HD domain-containing protein contains Pfam profile PF01966: HD domain 2 3 3 22 At1g26230 "chaperonin, putative similar to SWISS-PROT:P08927- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) [Pisum sativum]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family" 2 3 3 23 At1g29100 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain 2 3 3 24 At1g29170 expressed protein ; expression supported by MPSS 2 3 3 25 At1g29355 expressed protein 2 3 4 1 At1g29395 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 2 3 4 2 At1g29560 expressed protein ; expression supported by MPSS 2 3 4 3 At1g29620 hypothetical protein 2 3 4 4 At1g29810 dehydratase family similar to Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) (PHS) (4-alpha- hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD). (Swiss-Prot:P43335) [Pseudomonas aeruginosa]; contains Pfam PF01329: pterin-4-alpha-carbinolamine dehydratase 2 3 4 5 At1g29850 double-stranded DNA-binding family protein contains Pfam profile: PF01984 double-stranded DNA-binding domain 2 3 4 6 At1g32700 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 2 3 4 7 At1g32760 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 2 3 4 8 At1g32960 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 [Oryza sativa] 2 3 4 9 At1g33010 F-box family protein 2 3 4 10 At1g33220 "beta-1,3-glucanase, putative similar to plant beta-1,3-glucanase bg4 GI:2808438 from [Arabidopsis thaliana]" 2 3 4 11 At1g33270 patatin-related contains Patatin domain PF01734 2 3 4 12 At1g33470 RNA recognition motif (RRM)-containing protein similar to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 3 4 13 At1g33530 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 3 4 14 At1g43000 "zinc-binding family protein similar to zinc-binding protein [Pisum sativum] GI:16117799; contains Pfam profile PF04640 : Protein of unknown function, DUF597" 2 3 4 15 At1g43100 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea mays}; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 3 4 16 At1g43610 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 3 4 17 At1g43665 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 2 3 4 18 At1g43850 SEUSS transcriptional co-regulator identical to SEUSS transcriptional co-regulator [Arabidopsis thaliana] gi|18033922|gb|AAL57277 2 3 4 19 At1g43910 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 3 4 20 At1g44130 "nucellin protein, putative similar to nucellin GI:2290202 from [Hordeum vulgare]" 2 3 4 21 At1g44318 "porphobilinogen synthase, putative / delta-aminolevulinic acid dehydratase, putative similar to delta-aminolevulinic acid dehydratase (Alad) GI:493019 [SP|P43210] from Glycine max, SP|P24493 from Spinacia oleracea, SP|P30124 from Pisum sativum" 2 3 4 22 At1g49260 hypothetical protein 2 3 4 23 At1g49330 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 4 24 At1g49520 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 2 3 4 25 At1g49590 formin-binding protein-related similar to formin binding protein 21 (GI:3550080) [Homo sapiens]; similar to formin binding protein 21 (GI:3550077) [Mus musculus]; similar to Dinap1-interacting protein 1 (GI:8745458) [Crypthecodinium cohnii] 2 3 5 1 At1g49760 "polyadenylate-binding protein, putative / PABP, putative similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from [Nicotiana tabacum]" 2 3 5 2 At1g49820 5-methylthioribose kinase family contains TIGRfam TIGR01767: 5-methylthioribose kinase profile 2 3 5 3 At1g49970 ATP-dependent Clp protease proteolytic subunit (ClpR1) (nClpP5) identical to nClpP5 GB:BAA82069 GI:5360595 from [Arabidopsis thaliana]; identical to cDNA nClpP5 (nuclear encoded ClpP5) GI:5360594 2 3 5 4 At1g50020 expressed protein 2 3 5 5 At1g52880 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM (no apical meristem) GB:CAA63101 from [Petunia x hybrida]; identical to cDNA NAC domain protein GI:4325285 2 3 5 6 At1g52930 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 2 3 5 7 At1g53100 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 2 3 5 8 At1g53160 squamosa promoter-binding protein-like 4 (SPL4) nearly identical to squamosa promoter binding protein-like 4 [Arabidopsis thaliana] GI:5931657; contains Pfam profile PF03110: SBP domain 2 3 5 9 At1g53310 "phosphoenolpyruvate carboxylase, putative / PEP carboxylase, putative (PPC1) strong similarity to SP|P29196 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCASE) {Solanum tuberosum}; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase" 2 3 5 10 At1g53350 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 5 11 At1g53520 chalcone-flavanone isomerase-related low similarity to GI:499036 (Vitis vinifera) 2 3 5 12 At1g53570 "mitogen-activated protein kinase kinase kinase (MAPKKK), putative (MAP3Ka) identical to MEK kinase (MAP3Ka)[Arabidopsis thaliana] gi|4204912|gb|AAD10848" 2 3 5 13 At1g56170 "transcription factor, putative similar to Transcription factor GB:CAA74053 GI:2398533 from [Arabidopsis thaliana] similarity to transcription factor Hap5a similar to transcription factor Hap5a [Arabidopsis thaliana](GI:6523090)" 2 3 5 14 At1g56220 dormancy/auxin associated family protein similar to Auxin-repressed 12.5 kDa protein (Swiss-Prot:Q05349) [Fragaria ananassa]; similar to auxin-repressed protein (GI:927034) [Fragaria x ananassa]; similar to dormancy-associated protein (GI:2605887) [Pisum sativum] 2 3 5 15 At1g56380 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF 2 3 5 16 At1g56440 "serine/threonine protein phosphatase-related similar to SP|Q60676 Serine/threonine protein phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase T) (PPT) Mus musculus, Tetratricopeptide Repeats Of Protein Phosphatase 5 [Homo sapiens] GI:3212250; contains Pfam profile: PF00515: TPR Domain" 2 3 5 17 At1g56650 myb family transcription factor (MYB75) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB75) GI:3941507 2 3 5 18 At1g56710 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 2 3 5 19 At1g57660 60S ribosomal protein L21 (RPL21E) similar to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from [Arabidopsis thaliana] 2 3 5 20 At1g57730 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 2 3 5 21 At1g61600 expressed protein 2 3 5 22 At1g61660 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 2 3 5 23 At1g61820 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-mannosidase enzyme (GI:17226270) [Lycopersicon esculentum] 2 3 5 24 At1g61890 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 2 3 5 25 At1g62050 ankyrin repeat protein-related contains weak hit to Pfam profile PF00023: Ankyrin repeat 2 3 6 1 At1g62120 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 3 6 2 At1g62300 WRKY family transcription factor similar to putative DNA-binding protein GI:7268215 from [Arabidopsis thaliana] 2 3 6 3 At1g62350 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 6 4 At1g65060 4-coumarate--CoA ligase 3 / 4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777 4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3) (4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana} 2 3 6 5 At1g65120 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 2 3 6 6 At1g65260 "PspA/IM30 family protein contains Pfam PF04012: PspA/IM30 family profile; similar to Membrane-associated 30 kDa protein, chloroplast precursor (M30) (Swiss-Prot:Q03943) [Pisum sativum]; similar to phage shock protein A (GI:28806161) [Vibrio parahaemolyticus]; similar to Phage shock protein A. (Swiss-Prot:P23853) [Shigella flexneri]" 2 3 6 7 At1g65295 expressed protein 2 3 6 8 At1g65445 transferase-related similar to N-hydroxycinnamoyl/benzoyltransferase (GI:6469032) [Ipomoea batatas];similar to hydroxycinnamoyl transferase (GI:27475616) [Nicotiana tabacum] 2 3 6 9 At1g65510 expressed protein 2 3 6 10 At1g65710 expressed protein ; expression supported by MPSS 2 3 6 11 At1g65780 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 2 3 6 12 At1g68510 LOB domain protein 42 / lateral organ boundaries domain protein 42 (LBD42) identical to LOB DOMAIN 42 [Arabidopsis thaliana] GI:17227174; supported by full-length cDNA gi:17227173. 2 3 6 13 At1g68550 "AP2 domain-containing transcription factor, putative contains Pfam profile: PF00847 AP2 domain" 2 3 6 14 At1g68710 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, {Bos taurus} SP|Q29449, {Homo sapiens} SP|O43520; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 6 15 At1g68760 MutT/nudix family protein similar to SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13) {Methanococcus jannaschii}; contains Pfam profile PF00293: NUDIX domain 2 3 6 16 At1g68920 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 6 17 At1g68945 expressed protein 2 3 6 18 At1g69160 expressed protein 2 3 6 19 At1g69220 "serine/threonine protein kinase, putative identical to serine/threonine kinase [Arabidopsis thaliana] gi|2352084|gb|AAB68776" 2 3 6 20 At1g71930 no apical meristem (NAM) family protein similar to NAM GB:CAA63101 from [Petunia x hybrida] 2 3 6 21 At1g71990 "alpha-(1,4)-fucosyltransferase / galactoside 3(4)-L-fucosyltransferase (FUT13) (FucTC) identical to SP|Q9C8W3 Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M) (Galactoside 3(4)- L-fucosyltransferase) (FucTC) (AtFUT13) {Arabidopsis thaliana}; identical to cDNA alpha1,3-fucosyltransferase homologue (FucTC) GI:13992485" 2 3 6 22 At1g72140 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 2 3 6 23 At1g72190 "oxidoreductase family protein similar to D-3-phosphoglycerate dehydrogenase from Arabidopsis thaliana [SP|O04130], glyoxylate reductase from Homo sapiens (gi:6002730); contains Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826" 2 3 6 24 At1g72370 40S ribosomal protein SA (RPSaA) identical to laminin receptor-like protein GB:U01955 [Arabidopsis thaliana]; identical to cDNA laminin receptor homologue GI:16379 2 3 6 25 At1g72440 "CCAAT-box-binding transcription factor-related similar to CCAAT-box-binding transcription factor (CCAAT-binding factor) (CBF) (Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus musculus]" 2 3 7 1 At1g72600 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 2 3 7 2 At1g72650 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain 2 3 7 3 AT5G57480 PC-1 C11 2 3 7 4 3XSSC PC-1 C23 2 3 7 5 AT1G29930 PC-1 G11 2 3 7 6 3XSSC PC-1 G23 2 3 7 7 AT3G44150 PC-1 K11 2 3 7 8 3XSSC PC-1 K23 2 3 7 9 AT4G00810 PC-1 O11 2 3 7 10 3XSSC PC-1 O23 2 3 7 11 At1g75430 "homeodomain-containing protein contains 'Homeobox' domain signature, Prosite:PS00027" 2 3 7 12 At1g75500 "nodulin MtN21 family protein similar to MtN21 GB:CAA75575 GI:2598575 from (Medicago truncatula) (Mol. Plant Microbe Interact. 9 (4), 233-242 (1996)); contains Pfam profile PF00892: Integral membrane protein" 2 3 7 13 At1g75700 "abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 2 3 7 14 At1g75770 expressed protein 2 3 7 15 At1g75930 family II extracellular lipase 6 (EXL6) EXL6 (PMID:11431566); similar to anter-specific proline-rich protein (APG) SP:P40602 [Arabidopsis thaliana] 2 3 7 16 At1g76010 expressed protein 2 3 7 17 At1g76160 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase 2 3 7 18 At1g76210 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function 2 3 7 19 At1g78830 curculin-like (mannose-binding) lectin family protein similar to S glycoprotein [Brassica rapa] GI:2351186; contains Pfam profile PF01453: Lectin (probable mannose binding) 2 3 7 20 At1g78880 balbiani ring 1-related / BR1-related contains weak similarity to BR1 [Chironomus tentans] gi|7042|emb|CAA45607 2 3 7 21 At1g79020 transcription factor-related similar to enhancer of polycomb (GI:3757890) [Drosophila melanogaster]; similar to enhancer of polycomb (GI:11907923) [Homo sapiens] 2 3 7 22 At1g79080 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 7 23 At1g79260 expressed protein 2 3 7 24 At1g79340 "latex-abundant protein, putative (AMC7) / caspase family protein similar to latex-abundant protein [Hevea brasiliensis] gb:AAD13216; contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain" 2 3 7 25 At1g79480 "hypothetical protein low similarity to beta-1,3-glucanase-like protein GI:9758115 from [Arabidopsis thaliana]" 2 3 8 1 At1g79510 expressed protein 2 3 8 2 At2g02130 "plant defensin-fusion protein, putative (PDF2.3) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)" 2 3 8 3 At2g02220 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 8 4 At2g02440 hypothetical protein 2 3 8 5 At2g02490 hydroxyproline-rich glycoprotein family protein related to LENOD2 [Lupinus luteus] gi|296830|emb|CAA39050; and genefinder 2 3 8 6 At2g02680 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 3 8 7 At2g02730 expressed protein 2 3 8 8 At2g02890 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 3 8 9 At2g02960 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature" 2 3 8 10 At2g06520 "membrane protein, putative contains 2 transmembrane domains;" 2 3 8 11 At2g06630 "hypothetical protein similar to At2g12120, At1g45090, At2g05470, At5g28482" 2 3 8 12 At2g07020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 8 13 At2g07120 "F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain; similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]" 2 3 8 14 At2g07440 two-component responsive regulator-related / response regulator protein-related similar to response regulator 5 GI:3953599 from [Arabidopsis thaliana]; non-consensus (GC) donor site at intron 1 2 3 8 15 At2g07771 cytochrome c biogenesis protein-related 2 3 8 16 At2g07687 cytochrome c oxidase subunit 3 identical to cytochrome c oxidase subunit 3 (GI:15215914) [Arabidopsis thaliana]; similar to Cytochrome c oxidase polypeptide III (EC 1.9.3.1) (Swiss-Prot:P92514) [Arabidopsis thaliana] 2 3 8 17 At2g07696 ribosomal protein S7 family protein contains Pfam profile PF00177: Ribosomal protein S7p/S5e 2 3 8 18 At2g15325 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 8 19 At2g15370 "xyloglucan fucosyltransferase, putative (FUT5) identical to SP|Q9SJP4 Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5) {Arabidopsis thaliana}; similar to xyloglucan fucosyltransferase GI:5231145 from [Arabidopsis thaliana]" 2 3 8 20 At2g15550 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 2 3 8 21 At2g15590 expressed protein 2 3 8 22 At2g15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase identical to cyclophilin-40 [Arabidopsis thaliana] GI:13442983; supporting cDNA gi|13442982|gb|AY026065.1| 2 3 8 23 At2g15880 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 2 3 8 24 At2g16090 "zinc finger protein-related contains similarity to zinc finger proteins and Pfam domain, PF01485: IBR domain" 2 3 8 25 At2g16170 "expressed protein similar to At2g06640, At2g12110, At2g12100, At3g42590, At2g05460" 2 3 9 1 At2g18970 expressed protein 2 3 9 2 At2g19030 rapid alkalinization factor (RALF) family protein 2 3 9 3 At2g19230 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 3 9 4 At2g19300 hypothetical protein 2 3 9 5 At2g19490 recA family protein contains Pfam profile: PF00154 recA bacterial DNA recombination protein 2 3 9 6 At2g19550 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains esterase/lipase/thioesterase active site serine (PS50187) (Interpro entry IPR000379) and alpha/beta hydrolase fold (PF00561). 2 3 9 7 At2g19690 "phospholipase A2 beta, secretory low molecular weight identical to secretory low molecular weight phospholipase A2 beta [Arabidopsis thaliana] GI:25992715; contains INTERPRO domain IPR001211 phospholipase A2" 2 3 9 8 At2g19750 40S ribosomal protein S30 (RPS30A) 2 3 9 9 At2g22440 hypothetical protein 2 3 9 10 At2g22490 cyclin delta-2 (CYCD2) identical to SP|P42752 Cyclin delta-2 {Arabidopsis thaliana} 2 3 9 11 At2g22680 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain" 2 3 9 12 At2g22750 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 9 13 At2g22910 "GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein similar to SP|P08205 Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) {Escherichia coli}; contains Pfam profiles PF00696: Amino acid kinase family, PF00583: acetyltransferase, GNAT family" 2 3 9 14 At2g22970 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 3 9 15 At2g23090 expressed protein 2 3 9 16 At2g23130 arabinogalactan-protein (AGP17) identical to gi_11935086_gb_AAG41963 2 3 9 17 At2g26020 "plant defensin-fusion protein, putative (PDF1.2b) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 2 3 9 18 At2g26060 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD40-repeat containing protein Ciao 1 (SP:O76071) [Homo sapiens] 2 3 9 19 At2g26250 beta-ketoacyl-CoA synthase family (FIDDLEHEAD) (FDH) identical to GB:AJ010713 (fiddlehead protein) 2 3 9 20 At2g26310 expressed protein 2 3 9 21 At2g26490 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); related to En/Spm transposon family of maize 2 3 9 22 At2g26530 expressed protein 2 3 9 23 At2g26690 nitrate transporter (NTP2) identical to nitrate transporter (ntp2) [Arabidopsis thaliana] GI:4490321 2 3 9 24 At2g26740 "epoxide hydrolase, soluble (sEH) identical to ATsEH [Arabidopsis thaliana] GI:1109600" 2 3 9 25 At2g29390 "sterol 4-alpha-methyl-oxidase 1 (SMO1) nearly identical to sterol 4-alpha-methyl-oxidase GI:16973469 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase (SMO) partial cds, GI:16973431" 2 3 10 1 At2g29460 "glutathione S-transferase, putative " 2 3 10 2 At2g29610 F-box family protein contains Pfam profile PF00646: F-box domain 2 3 10 3 At2g29650 "inorganic phosphate transporter, putative similar to brain specific Na+-dependent inorganic phosphate cotransporter [Rattus norvegicus] GI:507415; contains Pfam profile PF00083: major facilitator superfamily protein" 2 3 10 4 At2g29820 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 2 3 10 5 At2g29880 hypothetical protein 2 3 10 6 At2g30020 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C (GI:4587992){Arabidopsis thaliana}" 2 3 10 7 At2g30090 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 10 8 At2g32710 kip-related protein 4 (KRP4) / cyclin-dependent kinase inhibitor 4 (ICK4) nearly identical to cyclin-dependent kinase inhibitor 4 (krp4) [Arabidopsis thaliana] GI:14422291 2 3 10 9 At2g32750 exostosin family protein contains Pfam profile: PF03016 exostosin family 2 3 10 10 At2g32890 hypothetical protein 2 3 10 11 At2g32940 "PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain" 2 3 10 12 At2g33120 synaptobrevin-related protein / vesicle-associated membrane protein 722 (VAMP722) (SAR1) identical to r to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; identical to cDNA synaptobrevin-related protein (SAR1) GI:600709 2 3 10 13 At2g33190 F-box family protein contains F-box domain Pfam:PF00646 2 3 10 14 At2g33330 "33 kDa secretory protein-related contains Pfam PF01657: Domain of unknown function, duplicated in 33 KDa secretory proteins" 2 3 10 15 At2g33370 60S ribosomal protein L23 (RPL23B) 2 3 10 16 At2g35960 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 2 3 10 17 At2g36000 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 3 10 18 At2g36145 expressed protein 2 3 10 19 At2g36210 auxin-responsive family protein similar to auxin-induced protein SAUR-AC1 (GI:546362) (PIR:T06084) [Arabidopsis thaliana] 2 3 10 20 At2g36370 F-box family protein (FBL11) contains similarity to leucine-rich repeats containing F-box protein FBL3 GI:5919219 from [Homo sapiens] 2 3 10 21 At2g36410 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 2 3 10 22 At2g36590 "proline transporter, putative strong similarity to proline transporter 1 GI:1769901 from [Arabidopsis thaliana]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein" 2 3 10 23 At2g36660 "polyadenylate-binding protein, putative / PABP, putative " 2 3 10 24 At2g39220 patatin family protein similar to patatin-like latex allergen [Hevea brasiliensis][PMID:10589016]; contains patatin domain PF01734 2 3 10 25 At2g39280 RabGAP/TBC domain-containing protein contains Pfam profile PF00566: TBC domain 2 3 11 1 At2g39430 disease resistance-responsive protein-related / dirigent protein-related contains similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669; contains similarity to dirigent protein [Thuja plicata] gi|6694709|gb|AAF25365 2 3 11 2 At2g39490 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 3 11 3 At2g39680 expressed protein 2 3 11 4 At2g39725 complex 1 family protein / LVR family protein contains Pfam PF05347: Complex 1 protein (LYR family) 2 3 11 5 At2g39830 LIM domain-containing protein contains Pfam profile PF00412: LIM domain 2 3 11 6 At2g39870 expressed protein 2 3 11 7 At2g42360 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 11 8 At2g42400 expressed protein 2 3 11 9 At2g42550 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 11 10 At2g42610 expressed protein contains Pfam profile PF04852: Protein of unknown function (DUF640) 2 3 11 11 At2g42770 "peroxisomal membrane 22 kDa family protein contains Mpv17 / PMP22 family domain, Pfam:PF04117" 2 3 11 12 At2g42830 agamous-like MADS box protein AGL5 / floral homeodomain transcription factor (AGL5) identical to SP|P29385 Agamous-like MADS box protein AGL5 {Arabidopsis thaliana} 2 3 11 13 At2g42980 aspartyl protease family protein contains pfam profile: PF00026 eukaryotic aspartyl protease 2 3 11 14 At2g43030 ribosomal protein L3 family protein contains Pfam profile PF00297: ribosomal protein L3 2 3 11 15 At2g45710 40S ribosomal protein S27 (RPS27A) 2 3 11 16 At2g45750 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 3 11 17 At2g45930 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 3 11 18 At2g45990 expressed protein 2 3 11 19 At2g46140 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P46518 Late embryogenesis abundant protein Lea14-A {Gossypium hirsutum}; contains Pfam profile PF03168: Late embryogenesis abundant protein" 2 3 11 20 At2g46200 expressed protein low similarity to ES18 [Mus musculus] GI:4416181 2 3 11 21 At2g46330 arabinogalactan-protein (AGP16) identical to gi|10880509|gb|AAG24284 2 3 11 22 At2g46375 expressed protein 2 3 11 23 At3g01730 expressed protein 2 3 11 24 At3g01790 ribosomal protein L13 family protein similar to putative ribosomal protein L13 GB:AAC07691 [Aquifex aeolicus] 2 3 11 25 At3g01920 "yrdC family protein contains Pfam PF01300: yrdC domain; similar to Protein yciO. (Swiss-Prot:P45847) [Shigella flexneri]; similar to Chain A, Crystal Structure Of E. Coli Ycio Length (GI:27573707) [Escherichia coli]" 2 3 12 1 At3g01970 WRKY family transcription factor similar to WRKY1 GB:AAC49527 [Petroselinum crispum] 2 3 12 2 At3g02120 hydroxyproline-rich glycoprotein family protein 2 3 12 3 At3g02160 hypothetical protein 2 3 12 4 At3g02290 "zinc finger (C3HC4-type RING finger) family protein contains zinc finger motif, C3HC4 type (RING finger)" 2 3 12 5 At3g02340 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 2 3 12 6 At3g04970 zinc finger (DHHC type) family protein similar to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 2 3 12 7 At3g05030 "sodium proton exchanger, putative (NHX2) similar to sodium proton exchanger Nhx1 GB:AAD16946 [Arabidopsis thaliana]; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563" 2 3 12 8 At3g05180 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, lanatoside 15'-O-acetylesterase [Digitalis lanata] GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 2 3 12 9 At3g05240 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 12 10 At3g05420 "acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif" 2 3 12 11 At3g05480 cell cycle checkpoint control protein family contains Pfam profile PF04139: Rad9; contains Prosite PS00976: Myristoyl-CoA:protein N-myristoyltransferase signature 2; similar to radio-resistance/chemo-resistance/cell cycle checkpoint control protein (GI:3869274) [Mus musculus] 2 3 12 12 At3g05610 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 2 3 12 13 At3g05650 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4A protein [Lycopersicon esculentum] gi|3097197|emb|CAA73187" 2 3 12 14 At3g08550 elongation defective 1 protein / ELD1 protein annotation temporarily based on supporting cDNA gi|23452833|gb|AF543710.1| 2 3 12 15 At3g08590 "2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative strong similarity to SP|Q42908 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) {Mesembryanthemum crystallinum}; contains Pfam profile PF01676: Metalloenzyme superfamily" 2 3 12 16 At3g08770 lipid transfer protein 6 (LTP6) identical to GI:8571927 2 3 12 17 At3g08840 D-alanine--D-alanine ligase family similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase) (Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase). (Swiss-Prot:P95803) [Streptococcus mutans] 2 3 12 18 At3g08955 expressed protein 2 3 12 19 At3g09010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 12 20 At3g09140 expressed protein contains Pfam profile PF05056: Protein of unknown function (DUF674); expression supported by MPSS 2 3 12 21 At3g09170 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 3 12 22 At3g11680 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 2 3 12 23 At3g11740 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 2 3 12 24 At3g11890 expressed protein 2 3 12 25 At3g11930 universal stress protein (USP) family protein similar to ER6 protein GB:AAD46412 GI:5669654 from [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 2 3 13 1 At3g12050 Aha1 domain-containing protein contains Pfam PF05146: Aha1 domain; similar to Protein C14orf3 (HSPC322) (Swiss-Prot:O95433) [Homo sapiens] 2 3 13 2 At3g12090 senescence-associated family protein similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 2 3 13 3 At3g12230 serine carboxypeptidase S10 family protein contains Pfam profile: PF00450 serine carboxypeptidase; similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 3 13 4 At3g12270 "protein arginine N-methyltransferase family protein similar to protein arginine N-methyltransferase 3 from {Rattus norvegicus} SP|O70467, {Homo sapiens} SP|O60678" 2 3 13 5 At3g14730 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 13 6 At3g14780 expressed protein 2 3 13 7 At3g14890 phosphoesterase identical to phosphoesterase [Arabidopsis thaliana] GI:21630064; contains Pfam profile PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 2 3 13 8 At3g14950 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q99615 DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein 2) {Homo sapiens}; contains Pfam profile PF00515: TPR Domain 2 3 13 9 At3g15090 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to NOGO-interacting mitochondrial protein from Mus musculus [gi:14522884]; contains Pfam profile: PF00107 zinc-binding dehydrogenases" 2 3 13 10 At3g15140 "exonuclease family protein contains exonuclease domain, Pfam:PF00929" 2 3 13 11 At3g15310 expressed protein 2 3 13 12 At3g15356 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 2 3 13 13 At3g17950 expressed protein ; expression supported by MPSS 2 3 13 14 At3g18030 halotolerance protein (HAL3A) identical to GB:AAD51616 from [Arabidopsis thaliana]; similar to Halotolerance protein Hal3b (SP:P94063)[Arabidopsis thaliana]; contains Pfam PF02441: Flavoprotein 2 3 13 15 At3g18170 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 2 3 13 16 At3g18220 phosphatidic acid phosphatase family protein / PAP2 family protein similar to phosphatidic acid phosphatase [Mus musculus] GI:1487873; contains Pfam profile: PF01569 phosphatase PAP2 superfamily 2 3 13 17 At3g18380 expressed protein 2 3 13 18 At3g18430 calcium-binding EF hand family protein similar to Calcineurin B subunit (Protein phosphatase 2B regulatory subunit) (Calcineurin regulatory subunit) SP:P42322 from [Naegleria gruberi]; contains Pfam profile PF00036: EF hand 2 3 13 19 At3g18590 plastocyanin-like domain-containing protein 2 3 13 20 At3g18650 MADS-box family protein contains similarity to hypothetical proteins of [Arabidopsis thaliana] 2 3 13 21 At3g21330 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 13 22 At3g21390 mitochondrial substrate carrier family protein 2 3 13 23 At3g21570 expressed protein 2 3 13 24 At3g21600 senescence/dehydration-associated protein-related similar to senescence-associated protein 12 [Hemerocallis hybrid cultivar] gi|3551958|gb|AAC34857; similar to early-responsive to dehydration stress ERD7 protein [Arabidopsis thaliana] gi|15320412|dbj|BAB63916 2 3 13 25 At3g21730 dihydroneopterin aldolase family protein similar to SP|O33725 Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) {Streptococcus pyogenes}; contains Pfam profile PF02152: dihydroneopterin aldolase 2 3 14 1 At3g21780 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 14 2 At3g21950 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) [GI:6002712][Clarkia breweri] and to SAM:benzoic acid carboxyl methyltransferase (BAMT)[GI:9789277][Antirrhinum majus] 2 3 14 3 At3g22010 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 5 (GI:13506747){Arabidopsis thaliana} 2 3 14 4 At3g24715 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain 2 3 14 5 At3g24770 "CLE41, putative CLAVATA/ESR-Related 41 (CLE41)" 2 3 14 6 At3g25030 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 3 14 7 At3g25090 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 2 3 14 8 At3g25240 hypothetical protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 3 14 9 At3g25400 expressed protein 2 3 14 10 At3g25580 thioredoxin-related contains weak similarity to thioredoxin (Swiss-Prot:O17486) [Echinococcus granulosus] 2 3 14 11 At3g25610 "haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Mus musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 14 12 At3g28240 hypothetical protein 97% similarity to At5g10670 (Arabidopsis thaliana); + 2 3 14 13 At3g28310 "expressed protein similar to At14a (TIGR_Ath1:At3g28290, TIGR_Ath1:At3g28300) [Arabidopsis thaliana]" 2 3 14 14 At3g28480 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 3 14 15 At3g28540 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 3 14 16 At3g28715 "H+-transporting two-sector ATPase, putative similar to SP|P54641 Vacuolar ATP synthase subunit d (EC 3.6.3.14) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) {Dictyostelium discoideum}; contains Pfam profile PF01992: ATP synthase (C/AC39) subunit" 2 3 14 17 At3g28770 expressed protein 2 3 14 18 At3g28930 avrRpt2-induced AIG2 protein (AIG2) identical to SP|P54121 AIG2 protein (avrRpt2-induced gene) {Arabidopsis thaliana} 2 3 14 19 At3g28970 expressed protein contains Pfam domain PF03556: Domain of unknown function (DUF298) 2 3 14 20 At3g42780 "hypothetical protein hypothetical protein MZB10.16 - Arabidopsis thaliana, EMBL:AC009326" 2 3 14 21 At3g42830 "ring-box protein Roc1/Rbx1/Hrt1, putative E3 ubiquitin ligase, SCF complex subunit; contains similarity to ring-box protein 1 RBX1 GI:4769004 from [Homo sapiens]" 2 3 14 22 At3g43153 "cAMP-dependent protein kinase inhibitor-related contains weak similarity to Swiss-Prot:P27776 cAMP-dependent protein kinase inhibitor, alpha form (PKI-alpha) (cAMP- dependent protein kinase inhibitor, muscle/brain isoform) [Rattus norvegicus]" 2 3 14 23 At3g43220 "phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to SAC domain protein 3 (SAC3) GI:31415722" 2 3 14 24 At3g43420 "hypothetical protein hypothetical protein q3037.6 - Oryza sativa, EMBL:OSA245900" 2 3 14 25 At3g43480 "hypothetical protein hypothetical protein At2g15180 - Arabidopsis thaliana, EMBL:AC006298" 2 3 15 1 At3g43670 "copper amine oxidase, putative similar to copper amine oxidase [Cicer arietinum] gi|3819099|emb|CAA08855" 2 3 15 2 At3g43720 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 15 3 At3g46670 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 15 4 At3g46730 "disease resistance protein (CC-NBS class), putative domain signature CC-NBS exists, suggestive of a disease resistance protein." 2 3 15 5 At3g46910 hypothetical protein 2 3 15 6 At3g46970 "starch phosphorylase, putative similar to alpha-glucan phosphorylase, H isozyme SP:P32811 from [Solanum tuberosum]" 2 3 15 7 At3g47150 "F-box family protein various predicted proteins, Arabidopsis thaliana" 2 3 15 8 At3g47210 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 2 3 15 9 At3g47360 short-chain dehydrogenase/reductase (SDR) family protein similar to sterol-binding dehydrogenase steroleosin GI:15824408 from [Sesamum indicum] 2 3 15 10 At3g47400 "pectinesterase family protein similar to pectinesterase (EC 3.1.1.11) from Vitis vinifera GI:15081598, Lycopersicon esculentum SP|Q43143 SP|P14280; contains Pfam profile PF01095 pectinesterase" 2 3 15 11 At3g50210 "2-oxoacid-dependent oxidase, putative strong similarity to partial cds of 2-oxoacid-dependent oxidase (din11) from GI:10834554 [Arabidopsis thaliana]" 2 3 15 12 At3g50260 "AP2 domain-containing transcription factor, putative EREBP-3 homolog, Stylosanthes hamata, EMBL:U91982" 2 3 15 13 At3g50430 expressed protein 2 3 15 14 At3g50500 "protein kinase, putative similar to abscisic acid-activated protein kinase [Vicia faba] gi|6739629|gb|AAF27340" 2 3 15 15 At3g50670 U1 small nuclear ribonucleoprotein 70 (U1-70k) 2 3 15 16 At3g50720 "protein kinase, putative similar to protein kinase ATN1 [Arabidopsis thaliana] gi|1054633|emb|CAA63387" 2 3 15 17 At3g50900 expressed protein 2 3 15 18 At3g50960 expressed protein 2 3 15 19 At3g53500 zinc knuckle (CCHC-type) family protein contains Pfam domain PF00098: Zinc knuckle 2 3 15 20 At3g53560 chloroplast lumen common family protein 2 3 15 21 At3g53730 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 3 15 22 At3g53770 late embryogenesis abundant protein-related / LEA protein-related contains weak similarity to Swiss-Prot:P46521 late embryogenesis abundant protein Lea5-A [Gossypium hirsutum] 2 3 15 23 At3g53910 malate dehydrogenase-related similar to malate dehydrogenase precursor [Medicago sativa] GI:2827084 2 3 15 24 At3g53970 proteasome inhibitor-related similar to proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from [Homo sapiens] 2 3 15 25 At3g54090 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 2 3 16 1 At3g54150 embryo-abundant protein-related similar to embryo-abundant protein [Picea glauca] GI:1350531 2 3 16 2 At3g56920 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 2 3 16 3 At3g56980 basic helix-loop-helix (bHLH) family protein 2 3 16 4 At3g57160 expressed protein 2 3 16 5 At3g57220 "UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative strong similarity to GI:5804772" 2 3 16 6 At3g57380 "expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563)" 2 3 16 7 At3g57420 "expressed protein contains Pfam domain PF03385: Protein of unknown function, DUF288" 2 3 16 8 At3g57590 F-box family protein contains F-box domain Pfam:PF00646 2 3 16 9 At3g57650 "acyl-CoA:1-acylglycerol-3-phosphate acyltransferase, putative similar to acyl-CoA:1-acylglycerol-3-phosphate acyltransferase GI:4583544 from [Brassica napus]" 2 3 16 10 At3g60410 expressed protein 2 3 16 11 At3g60460 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 2 3 16 12 At3g60620 phosphatidate cytidylyltransferase family protein contains Pfam profile: PF01148 phosphatidate cytidylyltransferase 2 3 16 13 At3g60680 expressed protein contains Pfam profile PF04859: Plant protein of unknown function (DUF641 2 3 16 14 At3g60840 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 2 3 16 15 At3g60900 fasciclin-like arabinogalactan-protein (FLA10) 2 3 16 16 At3g61080 fructosamine kinase family protein contains Pfam PF03881: Fructosamine kinase 2 3 16 17 At3g61140 "COP9 signalosome complex subunit 1 / CSN complex subunit 1 (CSN1) / COP11 protein (COP11) / FUSCA protein (FUS6) FUSCA6, COP11, CSN1; identical to FUS6 GI:432446, SP:P45432 from [Arabidopsis thaliana]; contains Pfam profile PF01399: PCI domain; identical to cDNA CSN complex subunit 1 (CSN1) GI:18056652" 2 3 16 18 At4g00240 "phospholipase D beta 2 / PLD beta 2 (PLDBETA2) / PLDdelta1 identical to SP|O23078 Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta 2) (PLDdelta1) [Arabidopsis thaliana]; contains Pfam profiles: PF00614 phospholipase D.active site motif, PF00168 C2 domain" 2 3 16 19 At4g00300 fringe-related protein + weak similarity to Fringe [Schistocerca gregaria](GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. 2 3 16 20 At4g00400 phospholipid/glycerol acyltransferase family protein 2 3 16 21 At4g00430 "plasma membrane intrinsic protein, putative identical to transmembrane protein GI:535780 from [Arabidopsis thaliana]; very strong similarity to SP|Q08733 Plasma membrane intrinsic protein 1C (Transmembrane protein B) (TMP-B) {Arabidopsis thaliana}; contains Pfam profile PF00230: Major intrinsic protein;" 2 3 16 22 At4g00560 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] 2 3 16 23 At4g00600 "tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P09440 C-1-tetrahydrofolate synthase, mitochondrial precursor (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3) {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" 2 3 16 24 At4g00750 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 2 3 16 25 At4g00770 expressed protein 2 3 17 1 At4g03270 "cyclin family protein similar to CycD3;2 [Lycopersicon esculentum] GI:6434199 ; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 3 17 2 At4g03300 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886" 2 3 17 3 At4g03450 "ankyrin repeat family protein contains ankyrin repeats, Pfam domain PF00023" 2 3 17 4 At4g03510 zinc finger (C3HC4-type RING finger) family protein (RMA1) identical to RING zinc finger protein RMA1 gi:3164222 2 3 17 5 At4g03680 hypothetical protein 2 3 17 6 At4g03890 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 3 17 7 At4g04090 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 2 3 17 8 At4g04190 expressed protein 2 3 17 9 At4g08874 hypothetical protein 2 3 17 10 At4g08910 expressed protein 2 3 17 11 At4g09110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 17 12 At4g09170 expressed protein ; expression supported by MPSS 2 3 17 13 At4g09400 "hypothetical protein similar to At3g45350, At2g14330" 2 3 17 14 At4g09470 hypothetical protein 2 3 17 15 At4g09630 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) 2 3 17 16 At4g09690 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 3 17 17 At4g12440 "adenine phosphoribosyltransferase, putative strong similarity to SP|P31166 Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT) {Arabidopsis thaliana}; contains Pfam profile PF00156: Phosphoribosyl transferase domain" 2 3 17 18 At4g12490 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 3 17 19 At4g12680 expressed protein ; expression supported by MPSS 2 3 17 20 At4g12730 fasciclin-like arabinogalactan-protein (FLA2) identical to gi_13377778_gb_AAK20858 2 3 17 21 At4g12890 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein similar to SP|P13284 Gamma-interferon inducible lysosomal thiol reductase precursor {Homo sapiens}; contains Pfam profile PF03227: Gamma interferon inducible lysosomal thiol reductase (GILT) 2 3 17 22 At4g12950 hypothetical protein 2 3 17 23 At4g13110 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 3 17 24 At4g13180 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain type dehydrogenase/reductase SP:Q08632 [Picea abies] 2 3 17 25 At4g15520 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P19396 tRNA (Guanosine-2'-O-)-methyltransferase (EC 2.1.1.34) {Escherichia coli O157:H7}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family; contains non_consensus donor splice site TA at exon 4" 2 3 18 1 At4g15563 expressed protein ; expression supported by MPSS 2 3 18 2 At4g15750 invertase/pectin methylesterase inhibitor family protein nearly identical to gi:3426058 novel gene of unknown function; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor; identical to cDNA IB1P8-4 protein GI:3426057 2 3 18 3 At4g15790 expressed protein 2 3 18 4 At4g15955 epoxide hydrolase-related similar to epoxide hydrolase GI:1109600 from [Arabidopsis thaliana] 2 3 18 5 At4g16000 expressed protein 2 3 18 6 At4g16144 expressed protein 2 3 18 7 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 2 3 18 8 At4g18660 hypothetical protein weak similarity to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] GI:688423 2 3 18 9 At4g18720 transcription elongation factor-related contains weak similarity to transcription elongation factors 2 3 18 10 At4g18880 heat shock transcription factor 21 (HSF21) identical to heat shock transcription factor 21 [Arabidopsis thaliana] GI:3399765; contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 3 18 11 At4g18930 cyclic phosphodiesterase identical to cyclic phosphodiesterase [Arabidopsis thaliana] gi|2065013|emb|CAA72363 2 3 18 12 At4g19060 "disease resistance protein-related contains Pfam domain, PF00931: NB-ARC domain, a novel signalling motif found in plant resistance gene products" 2 3 18 13 At4g19110 "protein kinase, putative contains protein kinase domain, Pfam:PF00069" 2 3 18 14 At4g19230 "cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_" 2 3 18 15 At4g19290 hypothetical protein 2 3 18 16 At4g22160 expressed protein 2 3 18 17 At4g22200 "potassium channel protein 2 (AKT2) (AKT3) identical to potassium channel [Arabidopsis thaliana] gi|1100898|gb|AAA97865; Note: also identical to AKT3 [Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is a truncated version of AKT2, PMID:10852932; member of the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+ channel family, PMID:11500563; identical to cDNA inward-rectifying K+ channel (AKT3) GI:1172219" 2 3 18 18 At4g22300 phospholipase/carboxylesterase family protein similar to acyl-protein thioesterase-1 [Homo sapiens] GI:9965372; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 2 3 18 19 At4g22340 "phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative similar to CDP-diacylglycerol synthetase (CDS) GI:2181182 from [Arabidopsis thaliana]" 2 3 18 20 At4g22540 "oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 2 3 18 21 At4g22590 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPA) GI:2944178; contains Pfam profile PF02358: Trehalose-phosphatase" 2 3 18 22 At4g22750 zinc finger (DHHC type) family protein contains DHHC zinc finger domain PF01529 2 3 18 23 At4g22790 MATE efflux family protein contains Pfam profile PF01554: Uncharacterized membrane protein family 2 3 18 24 At4g25370 Clp amino terminal domain-containing protein contains Pfam profile: PF02861 Clp amino terminal domain 2 3 18 25 At4g25410 basix helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 19 1 At4g25560 myb family transcription factor (MYB18) contains PFAM profile: Myb DNA binding domain PF00249 2 3 19 2 At4g25620 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family member At5g52430 [Arabidopsis thaliana];" 2 3 19 3 At4g25780 "pathogenesis-related protein, putative similar to gene PR-1 protein - Medicago truncatula, SP|Q40374; contains Pfam profile PF00188: SCP-like extracellular protein" 2 3 19 4 At4g25835 AAA-type ATPase family protein contains Pfam profile: PF00004 ATPase family 2 3 19 5 At4g25990 expressed protein 2 3 19 6 At4g26050 leucine-rich repeat family protein contains Pfam PF00560: Leucine Rich Repeat domains; 2 3 19 7 At4g28550 RabGAP/TBC domain-containing protein similar to SP|P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains Pfam profile PF00566: TBC domain 2 3 19 8 At4g28610 "myb family transcription factor, putative / phosphate starvation response regulator, putative (PHR1) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA phosphate starvation response regulator 1 (phr1 gene) GI:15384675" 2 3 19 9 At4g28750 "photosystem I reaction center subunit IV, chloroplast, putative / PSI-E, putative (PSAE1) identical to SP|Q9S831; similar to SP|P12354 Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) {Spinacia oleracea}; contains Pfam profile PF02427: Photosystem I reaction centre subunit IV / PsaE" 2 3 19 10 At4g28810 "expressed protein PMID: 12679534, putative bHLH127 transcription factor" 2 3 19 11 At4g28990 RNA-binding protein-related contains weak similarity to Swiss-Prot:Q01844 RNA-binding protein EWS (EWS oncogene)(Ewing sarcoma breakpoint region 1 protein) [Homo sapiens] 2 3 19 12 At4g29050 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 2 3 19 13 At4g29210 gamma-glutamyltranspeptidase family protein similar to SP|P07314 Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus}; contains Pfam profilePF01019: Gamma-glutamyltranspeptidase 2 3 19 14 At4g29250 "transferase family protein low similarity to CER2 Arabidopsis thaliana GI:1213594, anthocyanin 5-aromatic acyltransferase Gentiana triflora GI:4185599; contains Pfam profile PF02458 transferase family" 2 3 19 15 At4g31800 WRKY family transcription factor 2 3 19 16 At4g31850 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 19 17 At4g31990 "aspartate aminotransferase, chloroplast / transaminase A (ASP5) (AAT1) nearly identical to SP|P46248 Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis thaliana}" 2 3 19 18 At4g32030 expressed protein 2 3 19 19 At4g32190 centromeric protein-related low similarity to SP|Q02224 Centromeric protein E (CENP-E protein) {Homo sapiens} 2 3 19 20 At4g32270 UDP-sugar transporter-related contains weak similarity to Swiss-Prot:Q95YI5 UDP-sugar transporter UST74c [Drosophila melanogaster] 2 3 19 21 At4g32430 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 19 22 At4g32460 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 2 3 19 23 AT5G57480 PC-1 C11 2 3 19 24 3XSSC PC-1 C23 2 3 19 25 AT1G29930 PC-1 G11 2 3 20 1 3XSSC PC-1 G23 2 3 20 2 AT3G44150 PC-1 K11 2 3 20 3 3XSSC PC-1 K23 2 3 20 4 AT4G00810 PC-1 O11 2 3 20 5 3XSSC PC-1 O23 2 3 20 6 At4g35040 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 2 3 20 7 At4g35080 "high-affinity nickel-transport family protein contains Pfam domain, PF03824: High-affinity nickel-transport protein" 2 3 20 8 At4g35240 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 2 3 20 9 At4g35295 "homoserine kinase, putative / HSK, putative similar to homoserine kinase [Arabidopsis thaliana] GI:4927412" 2 3 20 10 At4g35420 "dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family similar to dihydroflavonol 4-reductase (Rosa hybrid cultivar, GI:1332411), CPRD14 protein (Vigna unguiculata, GI:1854445)" 2 3 20 11 At4g35480 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 2 3 20 12 At4g35640 "serine O-acetyltransferase, putative similar to serine acetyltransferase, Arabidopsis thaliana, GI:905391; contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats)" 2 3 20 13 At4g35700 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 20 14 At4g38310 galactosyl transferase GMA12/MNN10 family protein other predicted proteins Arabidopsis thaliana 2 3 20 15 At4g38370 phosphoglycerate/bisphosphoglycerate mutase family protein contains Pfam profile PF00300: phosphoglycerate mutase family 2 3 20 16 At4g38550 expressed protein 2 3 20 17 At4g38600 HECT-domain-containing protein / ubiquitin-transferase family protein similar to SP|Q14669Thyroid receptor interacting protein 12 (TRIP12) {Homo sapiens}; contains Pfam profile PF00632: HECT-domain (ubiquitin-transferase) 2 3 20 18 At4g38790 ER lumen protein retaining receptor family protein similar to SP|P35402 ER lumen protein retaining receptor (HDEL receptor) {Arabidopsis thaliana}; contains Pfam profile PF00810: ER lumen protein retaining receptor 2 3 20 19 At4g38840 "auxin-responsive protein, putative auxin-inducible SAUR gene, Raphanus sativus,AB000708" 2 3 20 20 At4g38970 "fructose-bisphosphate aldolase, putative strong similarity to plastidic fructose-bisphosphate aldolase (EC 4.1.2.13) from Nicotiana paniculata (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057 [SP|Q40677]" 2 3 20 21 At4g39020 SH3 domain-containing protein similar to SH3 domain-containing protein 2 [Arabidopsis thaliana] GI:16974678; contains Pfam profile PF00018: SH3 domain 2 3 20 22 At5g02470 "DP-2 transcription factor, putative (DPA) similar to Swiss-Prot:Q14188 transcription factor DP-2 (E2F dimerization partner 2) [Homo sapiens]" 2 3 20 23 At5g02502 expressed protein 8113. 2 3 20 24 At5g02640 "expressed protein predicted proteins, Arabidopsis thaliana and Oryza sativa" 2 3 20 25 At5g02700 F-box family protein low similarity to ribosomal RNA apurinic site specific lyase [Triticum aestivum] GI:6505722; contains F-box domain Pfam:PF00646 2 3 21 1 At5g02840 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 2 3 21 2 At5g02900 "cytochrome P450, putative cytochrome P450 homolog, Arabidopsis thaliana, PIR:T09367" 2 3 21 3 At5g03080 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily 2 3 21 4 At5g03140 "lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 2 3 21 5 At5g05800 expressed protein 2 3 21 6 At5g05860 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 3 21 7 At5g06000 "eukaryotic translation initiation factor 3G, putative / eIF3g, putative similar to eukaryotic translation initiation factor 3g [Arabidopsis thaliana] GI:12407751; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 3 21 8 At5g06060 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 3 21 9 At5g06190 expressed protein 2 3 21 10 At5g06240 expressed protein 2 3 21 11 At5g06400 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 21 12 At5g06440 expressed protein similar to unknown protein (gb|AAF23188.1) 2 3 21 13 At5g09540 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 2 3 21 14 At5g09600 succinate dehydrogenase cytochrome b subunit family protein similar to succinate dehydrogenase subunit 3 [Gossypium hirsutum] GI:14861484; contains Pfam profile PF01127: Succinate dehydrogenase cytochrome b subunit 2 3 21 15 At5g09770 ribosomal protein L17 family protein contains Pfam profile: PF01196 ribosomal protein L17 2 3 21 16 At5g09830 BolA-like family protein contains Pfam profile: PF01722 BolA-like protein 2 3 21 17 At5g09990 expressed protein 2 3 21 18 At5g10020 "leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase ERECTA, Arabidopsis thaliana, EMBL:AC004484" 2 3 21 19 At5g10180 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:2114104 2 3 21 20 At5g10240 asparagine synthetase 3 (ASN3) identical to asparagine synthetase (ASN3) [Arabidopsis thaliana] GI:3859534 2 3 21 21 At5g13360 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter 2 3 21 22 At5g13420 "transaldolase, putative similar to transaldolase [Solanum tuberosum] gi|2078350|gb|AAB54016" 2 3 21 23 At5g13560 expressed protein weak similarity to SP|O42184 Restin (Cytoplasmic linker protein-170) (CLIP-170) {Gallus gallus} 2 3 21 24 At5g13620 expressed protein ; expression supported by MPSS 2 3 21 25 At5g13780 "GCN5-related N-acetyltransferase, putative similar to SP|P07347 N-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 22 1 At5g13830 FtsJ-like methyltransferase family protein contains Pfam profile: PF01728 FtsJ-like methyltransferase 2 3 22 2 At5g14000 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 2 3 22 3 At5g14060 "aspartate kinase, lysine-sensitive nearly identical to gi:2257743" 2 3 22 4 At5g16800 "GCN5-related N-acetyltransferase (GNAT) family protein very low similarity to SP|P39909 Spermine/spermidine acetyltransferase (EC 2.3.1.57) {Bacillus subtilis}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 22 5 At5g16840 RNA recognition motif (RRM)-containing protein predicted proteins - Arabidopsis thaliana 2 3 22 6 At5g17010 sugar transporter family protein similar to D-xylose proton-symporter [Lactobacillus brevis] GI:2895856; contains Pfam profile PF00083: major facilitator superfamily protein 2 3 22 7 At5g17060 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster)" 2 3 22 8 At5g17220 "glutathione S-transferase, putative " 2 3 22 9 At5g17280 expressed protein similar to unknown protein (pir||T41692) 2 3 22 10 At5g17450 "heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403" 2 3 22 11 At5g17490 "gibberellin response modulator, putative / gibberellin-responsive modulator, putative putative member of the VHIID domain transcription factor family RGAL - Arabidopsis thaliana, EMBL:AJ224957" 2 3 22 12 At5g20050 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 22 13 At5g20110 "dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 2 3 22 14 At5g20260 exostosin family protein contains Pfam profile: PF03016 Exostosin family 2 3 22 15 At5g20320 "DEAD/DEAH box helicase, putative similar to CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain, PF03368: Domain of unknown function, PF00636: RNase3 domain, PF00035: Double-stranded RNA binding motif" 2 3 22 16 At5g20500 "glutaredoxin, putative similar to glutaredoxin [Populus tremula x Populus tremuloides] gi|19548658|gb|AAL90750" 2 3 22 17 At5g20570 ring-box protein-related similar to ring-box protein 1 GI:4769004 from [Homo sapiens] 2 3 22 18 At5g20720 "20 kDa chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20) identical to chloroplast 20 kDa chaperonin, chloroplast precursor (Protein Cpn21), chloroplast protein Cpn10, chloroplast chaperonin 10 (Ch-CPN10), SP|O65282 from [Arabidopsis thaliana]; identical to cDNA chaperonin 20 GI:14587372" 2 3 22 19 At5g20740 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 3 22 20 At5g24080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 22 21 At5g24130 expressed protein 2 3 22 22 At5g24290 integral membrane family protein contains Pfam domain PF01988: Integral membrane protein 2 3 22 23 At5g24314 expressed protein 2 3 22 24 At5g24450 transcription factor-related low similarity to transcription factor IIIC63 [Homo sapiens] GI:5281316 2 3 22 25 At5g24510 "60s acidic ribosomal protein P1, putative " 2 3 23 1 At5g24660 expressed protein 2 3 23 2 At5g24750 expressed protein 2 3 23 3 At5g27660 "DegP protease, putative similar to Serine protease HTRA2, mitochondrial precursor (High temperature requirement protein A2) (HtrA2) (Omi stress-regulated endoprotease) (Serine proteinase OMI) (SP:O43464) {Homo sapiens}" 2 3 23 4 At5g27720 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to SWISS-PROT:Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 [Mus musculus]" 2 3 23 5 At5g27880 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 23 6 At5g27940 "MFP1 attachment factor, putative similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659 similar to MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659" 2 3 23 7 At5g28120 hypothetical protein 2 3 23 8 At5g28180 kelch repeat-containing F-box family protein contains Pfam PF01344: Kelch motif; contains Pfam PF00646: F-box domain 2 3 23 9 At5g28370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 23 10 At5g28430 hypothetical protein 2 3 23 11 At5g36700 "phosphoglycolate phosphatase, putative similar to phosphoglycolate phosphatase precursor [Chlamydomonas reinhardtii] GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase" 2 3 23 12 At5g36740 PHD finger family protein 2 3 23 13 At5g36950 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 2 3 23 14 At5g37020 auxin-responsive factor (ARF8) identical to auxin response factor 8 GI:4104931 from [Arabidopsis thaliana] 2 3 23 15 At5g37180 "sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative similar to sucrose synthase GI:6682841 from [Citrus unshiu]" 2 3 23 16 At5g37240 hypothetical protein 2 3 23 17 At5g37400 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430" 2 3 23 18 At5g37450 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 23 19 At5g40340 "PWWP domain-containing protein KED, Nicotiana tabacum, EMBL:AB009883" 2 3 23 20 At5g40400 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat 2 3 23 21 At5g40560 "DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana]" 2 3 23 22 At5g40595 hypothetical protein 2 3 23 23 At5g40760 glucose-6-phosphate 1-dehydrogenase / G6PD (ACG12) idential to glucose-6-phosphate 1-dehydrogenase (acg12) [Arabidopsis thaliana] GI:5732197 2 3 23 24 At5g40820 "FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein similar to Atr protein [Xenopus laevis] GI:11385422; contains Pfam profiles PF00454 Phosphatidylinositol 3- and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain" 2 3 23 25 At5g40990 GDSL-motif lipase/hydrolase family protein similar to lipase [Arabidopsis thaliana] GI:1145627; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 2 3 24 1 At5g41050 expressed protein 2 3 24 2 At5g43730 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 3 24 3 At5g43780 sulfate adenylyltransferase 4 / ATP-sulfurylase 4 (APS4) identical to ATP sulfurylase precursor (APS4) [Arabidopsis thaliana] GI:4633131 2 3 24 4 At5g43950 expressed protein 2 3 24 5 At5g43990 "SET domain-containing protein identical to SET domain protein SUVR2 [Arabidopsis thaliana] GI:15290521; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA SET domain protein SUVR2 GI:15290520" 2 3 24 6 At5g44150 expressed protein 2 3 24 7 At5g44210 ERF domain protein 9 (ERF9) identical to ERF domain protein 9 GI:11414988 from [Arabidopsis thaliana] 2 3 24 8 At5g44345 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 3 24 9 At5g44400 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 2 3 24 10 At5g46930 "invertase/pectin methylesterase inhibitor family protein similar to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 2 3 24 11 At5g46990 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 3 24 12 At5g47150 YDG/SRA domain-containing protein low similarity to nuclear protein np95 [Mus musculus] GI:4220590; contains Pfam profile PF02182: YDG/SRA domain 2 3 24 13 At5g47200 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:303750 from [Pisum sativum]" 2 3 24 14 At5g47370 "homeobox-leucine zipper protein 2 (HAT2) / HD-ZIP protein 2 identical to homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) [Arabidopsis thaliana] SP:P46601; contains Pfam profiles PF04618: HD-ZIP protein N terminus, PF02183: Homeobox associated leucine zipper, PF00046: Homeobox domain" 2 3 24 15 At5g47430 expressed protein 2 3 24 16 At5g47530 "auxin-responsive protein, putative similar to auxin-induced protein AIR12 (GI:11357190) [Arabidopsis thaliana]; similar to stromal cell derived factor receptor 2 (GI:20381292) [Mus musculus]" 2 3 24 17 At5g47590 heat shock protein-related contains similarity to mitochondrial small heat shock protein [Lycopersicon esculentum] gi|3492854|dbj|BAA32547 2 3 24 18 At5g50220 F-box family protein contains F-box domain Pfam:PF00646 2 3 24 19 At5g50280 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 24 20 At5g50440 Golgi SNARE protein membrin 12 (MEMB12) identical to Membrin 12 (AtMEMB12) (Golgi SNAP receptor complex member 2-2) (GI:27805575)(SP:Q9FK28) {Arabidopsis thaliana}; similar to Probable 27 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 2) (SP:Q9SJL6) [Arabidopsis thaliana] 2 3 24 21 At5g50500 hypothetical protein 2 3 24 22 At5g50680 SUMO activating enzyme 1b (SAE1b) identical to SUMO activating enzyme 1b [Arabidopsis thaliana] GI:22652852; nearly identical to At5g50580; contains Pfam profile PF00899: ThiF family 2 3 24 23 At5g50760 auxin-responsive family protein similar to auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa gesneriana] 2 3 24 24 At5g50915 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 3 24 25 At5g50970 "WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat" 2 3 25 1 At5g53720 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 3 25 2 At5g53780 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 3 25 3 At5g53910 "(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 3 25 4 At5g53970 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 2 3 25 5 At5g54110 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 2 3 25 6 At5g54160 "quercetin 3-O-methyltransferase 1 / flavonol 3-O-methyltransferase 1 / caffeic acid/5-hydroxyferulic acid O-methyltransferase (OMT1) identical to O-methyltransferase 1 [Arabidopsis thaliana][GI:2781394], SP|Q9FK25 Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1) (Flavonol 3- O-methyltransferase 1) (Caffeic acid/5-hydroxyferulic acid O- methyltransferase) {Arabidopsis thaliana}" 2 3 25 7 At5g54340 "zinc finger (C2H2 type) protein-related contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 3 25 8 At5g54400 expressed protein 2 3 25 9 At5g57090 auxin transport protein (EIR1) identical to auxin transport protein EIR1 [Arabidopsis thaliana] gi|3377507|gb|AAC39513; identical to root gravitropism control protein [Arabidopsis thaliana] gi|4322486|gb|AAD16060 2 3 25 10 At5g57140 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 Calcineurin-like phosphoesterase 2 3 25 11 At5g57280 expressed protein 2 3 25 12 At5g57340 expressed protein 2 3 25 13 At5g57490 "porin, putative similar to 36kDA porin II [Solanum tuberosum] GI:515360; contains Pfam profile PF01459: Eukaryotic porin" 2 3 25 14 At5g57550 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR3) identical to endoxyloglucan transferase GI:5533317 from [Arabidopsis thaliana] 2 3 25 15 At5g57680 expressed protein 2 3 25 16 At5g57730 hypothetical protein 2 3 25 17 At5g60290 hypothetical protein 2 3 25 18 At5g60350 hypothetical protein 2 3 25 19 At5g60490 fasciclin-like arabinogalactan-protein (FLA12) 2 3 25 20 At5g60550 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 3 25 21 At5g60680 "expressed protein contains Pfam profile PF04520: Protein of unknown function, DUF584" 2 3 25 22 At5g60740 "ABC transporter family protein similar to ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) SP:Q9UNQ0 from [Homo sapiens]" 2 3 25 23 At5g60900 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 2 3 25 24 At5g60960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 3 25 25 At5g63650 "serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK2[Arabidopsis thaliana], SWISS-PROT:P43292; contains protein kinase domain, Pfam:PF00069" 2 3 26 1 At5g63710 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 26 2 At5g63890 "histidinol dehydrogenase, putative / HDH, putative strong similarity to SP|P24226 Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) {Brassica oleracea var.capitata}; contains Pfam profile PF00815: histidinol dehydrogenase" 2 3 26 3 At5g63930 "leucine-rich repeat transmembrane protein kinase, putative " 2 3 26 4 At5g64080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 3 26 5 At5g64140 40S ribosomal protein S28 (RPS28C) 2 3 26 6 At5g64280 "oxoglutarate/malate translocator, putative similar to SWISS-PROT:Q41364 2-oxoglutarate/malate translocator, chloroplast precursor [Spinach]{Spinacia oleracea}" 2 3 26 7 At5g64340 expressed protein 2 3 26 8 At5g66740 hypothetical protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 2 3 26 9 At5g66800 expressed protein 2 3 26 10 At5g66950 expressed protein 2 3 26 11 At5g67000 "AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.2 (GI:2281629) {Arabidopsis thaliana}" 2 3 26 12 At5g67170 "SEC-C motif-containing protein / OTU-like cysteine protease family protein contains Pfam profiles PF02338: OTU-like cysteine protease, PF02810: SEC-C motif" 2 3 26 13 At5g67210 expressed protein contains Pfam profile PF04669: Protein of unknown function (DUF579) 2 3 26 14 At5g67380 "casein kinase II alpha chain 1 identical to casein kinase II, alpha chain 1 (CK II) [Arabidopsis thaliana] SWISS-PROT:Q08467; contains protein kinase domain, Pfam:PF00069" 2 3 26 15 At5g67430 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 3 26 16 atc05 Randomly generated negative control 2 3 26 17 atc11 Randomly generated negative control 2 3 26 18 At5g46430 60S ribosomal protein L32 (RPL32B) 2 3 26 19 atc01 Randomly generated negative control 2 3 26 20 Alien7 Control: Stratagene Spotreport Alien Oligo 2 3 26 21 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 3 26 22 atc09 Randomly generated negative control 2 3 26 23 Alien3 Control: Stratagene Spotreport Alien Oligo 2 3 26 24 Blank Blank 2 3 26 25 Blank Blank 2 4 1 1 atc05 Randomly generated negative control 2 4 1 2 atc11 Randomly generated negative control 2 4 1 3 At5g46430 60S ribosomal protein L32 (RPL32B) 2 4 1 4 atc01 Randomly generated negative control 2 4 1 5 Alien7 Control: Stratagene Spotreport Alien Oligo 2 4 1 6 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 4 1 7 atc09 Randomly generated negative control 2 4 1 8 Alien3 Control: Stratagene Spotreport Alien Oligo 2 4 1 9 At1g03620 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 4 1 10 At1g03687 DTW domain-containing protein contains Pfam PF03942: DTW domain 2 4 1 11 At1g03830 "guanylate-binding family protein contains Pfam domains PF02263: Guanylate-binding protein, N-terminal domain and PF02841: Guanylate-binding protein, C-terminal domain" 2 4 1 12 At1g03860 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 2 4 1 13 At1g04010 lecithin:cholesterol acyltransferase family protein / LACT family protein weak similarity to SP|P40345 Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158) (PDAT) {Saccharomyces cerevisiae}; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) 2 4 1 14 At1g04070 expressed protein Contains similarity to hypothetical mitochondrial import receptor subunit gb Z98597 from S. pombe. ESTs gb|T45575 and gb|Z26435 and gb|AA394576 come from this gene 2 4 1 15 At1g04230 expressed protein 2 4 1 16 At1g04290 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein; EST gb|T45093 comes from this gene 2 4 1 17 At1g06950 chloroplast inner envelope protein-related similar to chloroplast inner envelope protein GI:1495767 from [Pisum sativum] 2 4 1 18 At1g06990 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 2 4 1 19 At1g07160 "protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C GI:2582800 from [Medicago sativa]" 2 4 1 20 At1g07220 expressed protein 2 4 1 21 At1g07360 "zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein similar to SP|O59800 Cell cycle control protein cwf5 {Schizosaccharomyces pombe}, RNA Binding Protein 47 [Nicotiana plumbaginifolia] GI:9663769; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain)" 2 4 1 22 At1g07420 sterol 4-alpha-methyl-oxidase 2 (SMO2) identical to sterol 4-alpha-methyl-oxidase GI:16973471 from [Arabidopsis thaliana]; identical to cDNA sterol 4-alpha-methyl-oxidase GI:16973470 2 4 1 23 At1g07540 "telomere-binding protein, putative similar to telomere binding protein TBP1 [Nicotiana glutinosa] gi|23664357|gb|AAN39330" 2 4 1 24 At1g07600 metallothionein-like protein 1A (MT-1A) (MT-Q) (MT-2) identical to Metallothionein-like protein 1A (MT-1A) (MT-Q) (MT-2) SP:P43392 from (Arabidopsis thaliana) 2 4 1 25 At1g10060 "branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1) nearly identical to SP|Q93Y32 Branched-chain amino acid aminotransferase 1, mitochondrial precursor (EC 2.6.1.42) (Atbcat-1) {Arabidopsis thaliana}; contains Pfam profile: PF01063 aminotransferase class IV" 2 4 2 1 At1g10120 "basic helix-loop-helix (bHLH) family protein contains Pfam domain, PF00010: Helix-loop-helix DNA-binding domain" 2 4 2 2 At1g10310 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 2 4 2 3 At1g10350 "DNAJ heat shock protein, putative similar to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 2 4 2 4 At1g10520 DNA polymerase lambda (POLL) identical to DNA polymerase lambda GI:12053869 from [Arabidopsis thaliana] 2 4 2 5 At1g10570 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to EST gb|N96456" 2 4 2 6 At1g10670 expressed protein 2 4 2 7 At1g10720 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 2 4 2 8 At1g13420 sulfotransferase family protein similar to steroid sulfotransferase 1 GI:3420004 from (Brassica napus); contains Pfam profile PF00685: Sulfotransferase domain 2 4 2 9 At1g13480 hypothetical protein 2 4 2 10 At1g13640 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 2 4 2 11 At1g13710 cytochrome P450 family protein similar to cytochrome P450 78A1 (SP:P48420) GI:349717 from [Zea mays] 2 4 2 12 At1g13920 "remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region" 2 4 2 13 At1g13960 WRKY family transcription factor similar to WKRY DNA-binding protein GB:AAD17441 2 4 2 14 At1g14150 oxygen evolving enhancer 3 (PsbQ) family protein extrinsic pII protein; contains Pfam profile PF05757: Oxygen evolving enhancer protein 3 (PsbQ) 2 4 2 15 At1g14200 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 2 16 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related similar to Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (SP:O23654) [Arabidopsis thaliana] 2 4 2 17 At1g16850 expressed protein 2 4 2 18 At1g17000 "alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325, GI:4468259 from (Pichia angusta); contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 2 4 2 19 At1g17060 "cytochrome P450, putative 41% identical to Cytochrome P450 [Catharanthus roseus] (gi|404690)" 2 4 2 20 At1g17230 "leucine-rich repeat family protein / protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560" 2 4 2 21 At1g17285 expressed protein 2 4 2 22 At1g17455 expressed protein 2 4 2 23 At1g17510 expressed protein 2 4 2 24 At1g20430 expressed protein 2 4 2 25 At1g20470 auxin-responsive family protein similar to indole-3-acetic acid induced protein ARG7 (SP:P32295) [Vigna radiata] 2 4 3 1 At1g20620 "catalase 3 (SEN2) almost identical to catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis thaliana]; identical to catalase 3 (SEN2) mRNA, partial cds GI:3158369" 2 4 3 2 At1g20670 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 2 4 3 3 At1g20816 expressed protein 2 4 3 4 At1g20870 expressed protein 2 4 3 5 At1g21050 "expressed protein contains Pfam profile PF04759: Protein of unknown function, DUF617" 2 4 3 6 At1g21100 "O-methyltransferase, putative similar to GI:2781394" 2 4 3 7 At1g23770 F-box family protein contains Pfam PF00646: F-box domain; similar to F-box only protein 7 (SP:Q9Y3I1) {Homo sapiens} ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 3 8 At1g23820 spermidine synthase 1 (SPDSYN1) / putrescine aminopropyltransferase 1 identical to SP|Q9ZUB3 Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) {Arabidopsis thaliana} 2 4 3 9 At1g23960 expressed protein contains Pfam profile PF04776: Protein of unknown function (DUF626) 2 4 3 10 At1g24010 expressed protein 2 4 3 11 At1g24170 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 2 4 3 12 At1g24230 paired amphipathic helix repeat-containing protein weak similarity to transcriptional co-repressor SIN3A [Drosophila melanogaster] GI:2570794; contains Pfam profile PF02671: Paired amphipathic helix repeat 2 4 3 13 At1g24360 "3-oxoacyl-[acyl-carrier protein] reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase identical to 3-oxoacyl-[acyl-carrier protein] reductase SP:P33207 from [Arabidopsis thaliana]" 2 4 3 14 At1g24430 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase from Catharanthus roseus GI:4091808 GB:AAC99311, acetyl CoA: benzylalcohol acetyltransferase Clarkia breweri GI:3170250, acetyl-CoA:benzylalcohol acetyltranferase Clarkia concinna GI:6166328; contains Pfam profile PF02458 transferase family" 2 4 3 15 At1g28110 "serine carboxypeptidase S10 family protein similar to H.vulgare gene encoding serine carboxypeptidase II, CP-MII GI:1731989" 2 4 3 16 At1g28150 expressed protein 2 4 3 17 At1g28320 protease-related similar to Protease degS [Precursor] (SP:P44947) [Haemophilus influenzae]; similar to DegP protease precursor (GI:2565436) [Arabidopsis thaliana] 2 4 3 18 At1g28340 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to receptor-like protein kinases" 2 4 3 19 At1g28470 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM protein GI:6066594 from [Petunia hybrida] 2 4 3 20 At1g28530 expressed protein 2 4 3 21 At1g28660 "lipase, putative strong similarity to lipase [Arabidopsis thaliana] GI:1145627" 2 4 3 22 At1g28700 "expressed protein similar to GI:2827651,GP:10764853, GI:10764852, GI:7527728, GI:4406788, GI:6063544 [Arabidopsis thaliana]; expression supported by MPSS" 2 4 3 23 At1g31850 "dehydration-responsive protein, putative strong similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase" 2 4 3 24 At1g31920 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 3 25 At1g32120 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) 2 4 4 1 At1g32180 "cellulose synthase family protein similar to cellulose synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays" 2 4 4 2 At1g32340 "zinc finger (C3HC4-type RING finger) family protein contains a Zinc finger, C3HC4 type (RING finger) signature, PROSITE:PS00518" 2 4 4 3 At1g32370 tobamovirus multiplication protein 2B (TOM2B) identical to tobamovirus multiplication 2B [Arabidopsis thaliana] gi|32698522|dbj|BAC24020; PMID: 12514139 2 4 4 4 At1g32500 "ATP-binding-cassette transporter, putative similar to ATP-binding-cassette transporter (ABC1) described in PMID:11156608" 2 4 4 5 At1g32540 "zinc finger protein, putative similar to zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872521|gb|AAC49660" 2 4 4 6 At1g36240 60S ribosomal protein L30 (RPL30A) similar to GI:6984132 from [Euphorbia esula] 2 4 4 7 At1g36380 expressed protein similar to vanilloid receptor-like protein GB:AAD26363 from [Homo sapiens] 2 4 4 8 At1g36950 zinc finger protein-related contains similarity to zinc finger proteins (C3HC4-type RING finger) 2 4 4 9 At1g37010 hypothetical protein 2 4 4 10 At1g39350 hypothetical protein 2 4 4 11 At1g40129 hypothetical protein 2 4 4 12 At1g42250 replication protein-related weak similarity to Replication Protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DMRPA1) (GI:2498844)(SP:Q24492) [Drosophila melanogaster] 2 4 4 13 At1g42460 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 2 4 4 14 At1g48350 ribosomal protein L18 family protein similar to ribosomal protein L18 GI:3980238 from [Thermotoga maritima] 2 4 4 15 At1g48405 hypothetical protein 2 4 4 16 At1g48580 expressed protein 2 4 4 17 At1g48610 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif 2 4 4 18 At1g48780 hypothetical protein 2 4 4 19 At1g48840 expressed protein contains Pfam profile: PF04842 plant protein of unknown function (DUF639) 2 4 4 20 At1g49015 eukaryotic translation initiation factor-related contains similarity to eukaryotic translation initiation factor 3 subunit 9 SP:Q9C5Z1 2 4 4 21 At1g49100 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 4 22 At1g52060 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 4 23 At1g52120 jacalin lectin family protein simiilar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 4 24 At1g52290 protein kinase family protein contains Pfam PF00069: Protein kinase domain 2 4 4 25 At1g52325 hypothetical protein 2 4 5 1 At1g52480 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 5 2 At1g52520 "far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family" 2 4 5 3 At1g52690 "late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P13934 Late embryogenesis abundant protein 76 (LEA 76) {Brassica napus}; contains Pfam profile PF02987: Late embryogenesis abundant protein" 2 4 5 4 At1g52740 "histone H2A, putative similar to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 2 4 5 5 At1g55370 expressed protein 2 4 5 6 At1g55440 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 5 7 At1g55570 multi-copper oxidase type I family protein nearly identical to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Multicopper oxidase domain PF00394 2 4 5 8 At1g55630 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 5 9 At1g55790 hypothetical protein 2 4 5 10 At1g55840 "SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein similar to polyphosphoinositide binding protein SEC14 homolog Ssh1p (GB:AAB94598) [Glycine max]; identified in Eur J Biochem 1998 Dec 1;258(2):402-10 as AtSEC14, characterized by functional complementation in S. cerevisiae." 2 4 5 11 At1g55990 "glycine-rich protein predicted proteins, Arabidopsis thaliana" 2 4 5 12 At1g56030 "MIF4G domain-containing protein / U-box domain-containing protein low similarity to intermediate filament filarin [Hirudo medicinalis] GI:4761082; contains Pfam profiles PF02854: MIF4G domain, PF04564: U-box domain" 2 4 5 13 At1g60720 hypothetical protein 2 4 5 14 At1g60780 clathrin adaptor complexes medium subunit family protein contains Pfam profile: PF00928 adaptor complexes medium subunit family 2 4 5 15 At1g60950 "ferredoxin, chloroplast (PETF) identical to FERREDOXIN PRECURSOR GB:P16972 [SP|P16972] from [Arabidopsis thaliana]" 2 4 5 16 At1g60990 glycine cleavage T family protein / aminomethyl transferase family protein contains Pfam profile: PF01571 glycine cleavage T-protein (aminomethyl transferase) 2 4 5 17 At1g61130 serine carboxypeptidase S10 family protein similar to Serine carboxypeptidase II-3 precursor (SP:P52711) (CP-MII.3. [Hordeum vulgare] 2 4 5 18 At1g61190 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 2 4 5 19 At1g61370 "S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding)" 2 4 5 20 At1g61430 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 2 4 5 21 At1g64180 intracellular protein transport protein USO1-related similar to Rap8 (GI:2326183) [Rhynchosciara americana]; contains weak similarity to Swiss-Prot:P25386 intracellular protein transport protein USO1 [Saccharomyces cerevisiae] 2 4 5 22 At1g64230 "ubiquitin-conjugating enzyme, putative identical or nearly so to Ubiquitin-conjugating enzymes SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 5 23 At1g64390 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-beta-1,4-glucanase GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol. 40, 323-332 (1999))" 2 4 5 24 At1g64450 "proline-rich family protein contains proline rich extensins, INTERPRO:IPR0002965" 2 4 5 25 At1g64625 expressed protein similar to cDNA bHLH transcription factor (bHLH epsilon gene) GI:32563003 2 4 6 1 At1g64680 expressed protein 2 4 6 2 At1g64850 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 2 4 6 3 At1g64910 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 4 6 4 At1g67700 expressed protein 2 4 6 5 At1g67750 pectate lyase family protein similar to pectate lyase GI:14289169 from [Salix gilgiana] 2 4 6 6 At1g67865 expressed protein 2 4 6 7 At1g67920 expressed protein 2 4 6 8 At1g68050 "F-box family protein (FKF1) / adagio 3 (ADO3) E3 ubiquitin ligase SCF complex F-box subunit; identical to FKF1 GI:6960305 and Adagio 3 GI:13487072 from [Arabidopsis thaliana]; contains Pfam profiles PF01344: Kelch motif, PF00785: PAC motif and PF00646: F-box domain; contains TIGRfam profile TIGR00229: PAS domain S-boxidentical to cDNA Adagio 3 (ADO3) GI:13487071" 2 4 6 9 At1g68110 "epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related similar to clathrin assembly protein AP180 (GI:6492344) [Xenopus laevis]; contains Pfam profile: PF01417 ENTH domain, suggesting involvement in endocytosis or cytoskeletal machinery" 2 4 6 10 At1g68280 thioesterase-related contains domain similarity with PF03061: thioesterase family protein 2 4 6 11 At1g68340 expressed protein 2 4 6 12 At1g70990 proline-rich family protein 2 4 6 13 At1g71040 multi-copper oxidase type I family protein similar to SP|P07788 Spore coat protein A {Bacillus subtilis}; contains Pfam profile PF00394: Multicopper oxidase 2 4 6 14 At1g71220 "UDP-glucose:glycoprotein glucosyltransferase, putative similar to UDP-glucose:glycoprotein glucosyltransferase precursor GB:Q09332 [SP|Q09332] from Drosophila melanogaster, [gi:7670746] and [gi:11346464] from Homo sapiens" 2 4 6 15 At1g71270 Vps52/Sac2 family protein similar to SP|P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family 2 4 6 16 At1g71430 expressed protein 2 4 6 17 At1g71490 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 6 18 At1g71730 expressed protein 2 4 6 19 At1g71790 "F-actin capping protein beta subunit family protein contains Pfam profile: PF01115 F-actin capping protein, beta subunit" 2 4 6 20 At1g74530 expressed protein 2 4 6 21 At1g74580 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile: PF01535 PPR repeat 2 4 6 22 At1g74770 expressed protein 2 4 6 23 At1g74830 "expressed protein contains Pfam profile PF04576: Protein of unknown function, DUF593" 2 4 6 24 At1g75000 GNS1/SUR4 membrane family protein contains Pfam profile PF01151: GNS1/SUR4 family 2 4 6 25 At1g75060 expressed protein ; expression supported by MPSS 2 4 7 1 At1g75220 "integral membrane protein, putative strong similarity to integral membrane protein GI:1209756 from [Beta vulgaris]; contains Pfam profile PF00083: major facilitator superfamily protein" 2 4 7 2 At1g75270 "dehydroascorbate reductase, putative similar to GI:6939839 from [Oryza sativa]" 2 4 7 3 AT5G57480 PC-1 D11 2 4 7 4 3XSSC PC-1 D23 2 4 7 5 AT1G29930 PC-1 H11 2 4 7 6 3XSSC PC-1 H23 2 4 7 7 AT3G44150 PC-1 L11 2 4 7 8 3XSSC PC-1 L23 2 4 7 9 AT4G00810 PC-1 P11 2 4 7 10 3XSSC PC-1 P23 2 4 7 11 At1g78000 sulfate transporter (Sultr1;2) identical to sulfate transporter Sultr1;2 [Arabidopsis thaliana] GI:7768660; contaisn Pfam profiles PF00916: Sulfate transporter family and PF01740: STAS domain; contains TIGRfam profile TIGR00815: sulfate permease 2 4 7 12 At1g78060 glycosyl hydrolase family 3 protein similar to xylosidase GI:2102655 from [Aspergillus niger] 2 4 7 13 At1g78210 "hydrolase, alpha/beta fold family protein low similarity to hydrolases from Rhodococcus sp. EtbD2 GI:3273241, EtbD1 GI:3273239; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 2 4 7 14 At1g78260 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif-containing protein SEB-4 GI:8895698 from [Xenopus laevis]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 2 4 7 15 At1g78450 SOUL heme-binding family protein weak similarity to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 2 4 7 16 At1g78510 solanesyl diphosphate synthase (SPS) identical to solanesyl diphosphate synthase [Arabidopsis thaliana] GI:19911233; contains Pfam profile PF00348: Polyprenyl synthetase 2 4 7 17 At1g78660 "gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana}" 2 4 7 18 At1g78710 expressed protein similar to hypothetical protein GI:3201617 from [Arabidopsis thaliana]; expression supported by MPSS 2 4 7 19 At2g01270 "thioredoxin family protein low similarity to quiescin [Homo sapiens] GI:13257405; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 2 4 7 20 At2g01320 ABC transporter family protein 2 4 7 21 At2g01470 "St12p protein (ST12p) / SEC12p protein, putative 99.8% identical to St12p protein (GI:166878) {Arabidopsis thaliana}" 2 4 7 22 At2g01520 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:169000] contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 2 4 7 23 At2g01690 expressed protein 2 4 7 24 At2g01740 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 7 25 At2g01910 microtubule associated protein (MAP65/ASE1) family protein low similarity to protein regulating cytokinesis 1 (PRC1) [Homo sapiens] GI:2865521; contains Pfam profile PF03999: Microtubule associated protein (MAP65/ASE1 family) 2 4 8 1 At2g01950 "leucine-rich repeat transmembrane protein kinase, putative similar to brassinosteroid insensitive protein" 2 4 8 2 At2g05170 vacuolar protein sorting 11 family protein / VPS11 family protein similar to Vacuolar protein sorting 11 (hVPS11) (PP3476) (Swiss-Prot:Q9H270) [Homo sapiens]; similar to Vacuolar biogenesis protein END1 (PEP5 protein) (Vacuolar protein sorting 11) (Swiss-Prot:P12868) [Saccharomyces cerevisiae] 2 4 8 3 At2g05250 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 2 4 8 4 At2g05440 glycine-rich protein 2 4 8 5 At2g05540 glycine-rich protein 2 4 8 6 At2g05760 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family 2 4 8 7 At2g05840 20S proteasome alpha subunit A2 (PAA2) identical to GB:AF043519 2 4 8 8 At2g06005 expressed protein 2 4 8 9 At2g06040 expressed protein 2 4 8 10 At2g14240 hypothetical protein and genefinder 2 4 8 11 At2g14290 F-box family protein contains F-box domain Pfam:PF00646 2 4 8 12 At2g14590 hypothetical protein 2 4 8 13 At2g14660 expressed protein contains Pfam PF04543: Family of unknown function (DUF589); similar to cThy28kD (GI:995778) [Gallus gallus]; similar to thymocyte protein mThy28 (GI:23978374) [Mus musculus] 2 4 8 14 At2g14820 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 2 4 8 15 At2g14860 "peroxisomal membrane protein 22 kDa, putative similar to 22 kDa peroxisomal membrane protein {Mus musculus} SWISS-PROT:P42925, NCBI_gi:454833" 2 4 8 16 At2g15050 "lipid transfer protein, putative similar to SP|Q42641 nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) {Brassica oleracea}; contains Pfam Protease inhibitor/seed storage/LTP family domain PF00234" 2 4 8 17 At2g15090 "fatty acid elongase, putative similar to fatty acid elongase 1 [GI:881615]" 2 4 8 18 At2g18130 purple acid phosphatase (PAP11) identical to purple acid phosphatase (PAP11) GI:20257484 from [Arabidopsis thaliana] 2 4 8 19 At2g18190 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 2 4 8 20 At2g18300 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain ;supported by cDNA gi|20127067|gb|AF488597.1| 2 4 8 21 At2g18370 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid-transfer protein [Nicotiana glauca] GI:6782436; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 4 8 22 At2g18530 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 8 23 At2g18600 "RUB1-conjugating enzyme, putative strong similarity to gi:6635457 RUB1 conjugating enzyme [Arabidopsis thaliana]; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 8 24 At2g18780 F-box family protein contains F-box domain Pfam:PF00646 2 4 8 25 At2g18850 "SET domain-containing protein low similarity to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Spinacia oleracea] GI:3403236; contains Pfam profile PF00856: SET domain" 2 4 9 1 At2g21490 "dehydrin family protein contains Pfam domain, PF00257: Dehydrin" 2 4 9 2 At2g21550 "bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative similar to THY-1 [SP| Q05762] and THY-2 [SP|Q05763] from Arabidopsis thaliana; contains Pfam profiles PF00303 thymidylate synthase and PF00186 dihydrofolate reductase" 2 4 9 3 At2g21730 "mannitol dehydrogenase, putative similar to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase (Populus tremuloides) (gi:14279694); contains Pfam zinc-binding dehydrogenase domain PF00107" 2 4 9 4 At2g21800 expressed protein 2 4 9 5 At2g21940 "shikimate kinase, putative similar to shikimate kinase precursor from Lycopersicon esculentum [SP|Q00497]; contains Pfam shikimate kinase domain PF01202" 2 4 9 6 At2g22000 expressed protein 2 4 9 7 At2g22190 "trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase" 2 4 9 8 At2g22250 "aminotransferase class I and II family protein similar to aspartate aminotransferase from Bacillus stearothermophilus SP|Q59228, Thermus aquaticus SP|O33822; contains Pfam profile PF00155 aminotransferase, classes I and II" 2 4 9 9 At2g25150 "transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase [gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase [gi:11559716] from Taxus cuspidata; contains Pfam transferase family domain PF00248; contains EST gb:R65039" 2 4 9 10 At2g25210 60S ribosomal protein L39 (RPL39A) 2 4 9 11 At2g25370 zinc finger protein-related contains weak similarity to zinc fingers and Pfam:PF01485 IBR domain 2 4 9 12 At2g25450 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967)" 2 4 9 13 At2g25620 "protein phosphatase 2C, putative / PP2C, putative " 2 4 9 14 At2g25650 "DNA-binding storekeeper protein-related contains similarity to storekeeper protein [Solanum tuberosum] gi|14268476|emb|CAC39398; contains PF04504: Protein of unknown function, DUF573" 2 4 9 15 At2g25800 expressed protein 2 4 9 16 At2g25840 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 2 4 9 17 At2g28480 expressed protein contains Pfam profile PF01985: Uncharacterised protein family; expression supported by MPSS 2 4 9 18 At2g28540 expressed protein 2 4 9 19 At2g28680 "cupin family protein similar to legumin (11S-globulin) from Ginkgo biloba [GI:949869], 11S globulin from Avena sativa [GI:472867]; contains a 11-S plant seed storage protein signature (PS00305)" 2 4 9 20 At2g28740 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 4 9 21 At2g28910 CAX-interacting protein 4 (CAXIP4) contains Pfam domain PF00098: Zinc knuckle; identical to cDNA CAX-interacting protein 4 GI:27651998 2 4 9 22 At2g28970 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 9 23 At2g29150 "tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase SP:P50165 from [Datura stramonium]" 2 4 9 24 At2g29220 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 2 4 9 25 At2g31880 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 10 1 At2g31940 expressed protein 2 4 10 2 At2g32090 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 2 4 10 3 At2g32150 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 4 10 4 At2g32290 "beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative similar to beta-amylase GI:13560977 from [Castanea crenata]" 2 4 10 5 At2g32340 TraB family protein contains Pfam domain PF01963: TraB family 2 4 10 6 At2g32500 expressed protein 2 4 10 7 At2g32560 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 10 8 At2g35140 expressed protein ; expression supported by MPSS 2 4 10 9 At2g35200 expressed protein 2 4 10 10 At2g35360 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 4 10 11 At2g35420 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 10 12 At2g35585 expressed protein 2 4 10 13 At2g35620 "leucine-rich repeat transmembrane protein kinase, putative similar to somatic embryogenesis receptor-like kinase 1 (SERK1) [Zea mays] gi|13897318|emb|CAC37640; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 10 14 At2g35740 sugar transporter family protein similar to proton myo-inositol transporter [Homo sapiens] GI:15211933; contains Pfam profile PF00083: major facilitator superfamily protein 2 4 10 15 At2g35795 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 2 4 10 16 At2g38390 "peroxidase, putative similar to peroxidase isozyme [Armoracia rusticana] gi|217934|dbj|BAA14144; identical to cDNA class III peroxidase ATP34, GI:17530563" 2 4 10 17 At2g38450 expressed protein 2 4 10 18 At2g38630 expressed protein 2 4 10 19 At2g38690 hypothetical protein 2 4 10 20 At2g38820 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 4 10 21 At2g38860 "proteaseI (pfpI)-like protein (YLS5) contains Pfam profile PF01965: DJ-1/PfpI family; supporting cDNA gi|13122287|dbj|AB047808.1|; identical to proteaseI (pfpI)-like protein [Arabidopsis thaliana] GI:13122288, cDNA proteaseI (pfpI)-like protein GI:13122287" 2 4 10 22 At2g39000 "GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family" 2 4 10 23 At2g39050 "hydroxyproline-rich glycoprotein family protein contains QXW lectin repeat domain, Pfam:PF00652" 2 4 10 24 At2g41590 expressed protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 2 4 10 25 At2g41630 transcription initiation factor IIB-1 / general transcription factor TFIIB-1 (TFIIB1) identical to transcription initiation factor IIB-1 (TFIIB1) SP:P48512 from [Arabidopsis thaliana] 2 4 11 1 At2g41760 expressed protein 2 4 11 2 At2g41820 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 11 3 At2g41960 expressed protein 2 4 11 4 At2g42010 "phospholipase D beta 1 / PLD beta 1 (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta) {Arabidopsis thaliana}; contains Pfam profiles: PF00614 phospholipase D.active site motif, PF00168 C2 domain" 2 4 11 5 At2g42170 "actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806" 2 4 11 6 At2g42220 rhodanese-like domain-containing protein contains rhodanese-like domain PF:00581 2 4 11 7 At2g44830 "protein kinase, putative similar to protein kinase PVPK-1 [Phaseolus vulgaris] SWISS-PROT:P15792" 2 4 11 8 At2g44890 cytochrome P450 family protein contains Pfam PF00067: Cytochrome P450; similar to Cytochrome P450 86A2 (SP:O23066) [Arabidopsis thaliana] 2 4 11 9 At2g45030 "mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus" 2 4 11 10 At2g45100 "transcription factor IIB (TFIIB) family protein contains Pfam domain, PF00382: Transcription factor TFIIB repeat" 2 4 11 11 At2g45270 glycoprotease M22 family protein similar to SP|P36175 O-sialoglycoprotein endopeptidase (EC 3.4.24.57) (Glycoprotease) {Pasteurella haemolytica}; contains Pfam profile PF00814: Glycoprotease family 2 4 11 12 At2g45330 "tRNA 2'phosphotransferase, putative contains similarity to Swiss-Prot:Q12272 tRNA 2'phosphotransferase [Saccharomyces cerevisiae]; contains Pfam domain PF01885: RNA 2'-phosphotransferase, Tpt1 / KptA family" 2 4 11 13 At2g45520 expressed protein 2 4 11 14 At2g45560 cytochrome P450 family protein 2 4 11 15 At2g16365 F-box family protein contains Pfam:PF00646 F-box domain 2 4 11 16 At3g01015 expressed protein ; expression supported by MPSS 2 4 11 17 At3g01150 "polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Sus scrofa} SP|Q29099, {Mus musculus} SP|P17225; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 4 11 18 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) identical to SP|Q43735 Peroxidase 27 precursor (EC 1.11.1.7) (Atperox P27) (PRXR7) (ATP12a) {Arabidopsis thaliana} 2 4 11 19 At3g01345 Expressed protein 2 4 11 20 At3g01390 "vacuolar ATP synthase subunit G 1 (VATG1) / V-ATPase G subunit 1 (VAG1) / vacuolar proton pump G subunit 1 (VMA10) identical to SWISS-PROT:O82628 vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1, Vacuolar proton pump G subunit 1) [Arabidopsis thaliana]" 2 4 11 21 At3g01520 universal stress protein (USP) family protein similar to ER6 protein (GI:5669654) [Lycopersicon esculentum]; contains Pfam profile PF00582: universal stress protein family 2 4 11 22 At3g01580 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 2 4 11 23 At3g04170 "germin-like protein, putative contains Pfam profile: PF01072 germin family; similar to germin-like protein type2 GB:CAA63023 [SP|P92996], GLP6 [SP|P92997], GLP2A [SP|P92999] [Arabidopsis thaliana]" 2 4 11 24 At3g04230 40S ribosomal protein S16 (RPS16B) similar to 40S ribosomal protein S16 GB:AAD22696 [Arabidopsis thaliana] 2 4 11 25 At3g04380 "SET domain-containing protein (SUVR4) nearly identical to Su(VAR)3-9-related protein 4 [Arabidopsis thaliana] GI:17066863; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4) GI:17066862, which is an SET domain protein similar to Drosophila SU(VAR)3-9" 2 4 12 1 At3g04440 "expressed protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 2 4 12 2 At3g04600 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) 2 4 12 3 At3g04630 expressed protein 2 4 12 4 At3g04790 ribose 5-phosphate isomerase-related similar to ribose-5-phosphate isomerase GI:18654317 from [Spinacia oleracea] 2 4 12 5 At3g04830 expressed protein 2 4 12 6 At3g07350 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 2 4 12 7 At3g07400 lipase class 3 family protein contains Pfam profile PF01764: Lipase 2 4 12 8 At3g07525 "autophagocytosis-associated family protein contains autophagocytosis associated protein C-terminal domain, Pfam:PF03987" 2 4 12 9 At3g07568 expressed protein 2 4 12 10 At3g07740 transcriptional adaptor (ADA2a) identical to transcriptional adaptor ADA2a [Arabidopsis thaliana] gi|13591698|gb|AAK31319 2 4 12 11 At3g07760 expressed protein 2 4 12 12 At3g07930 HhH-GPD base excision DNA repair family protein 2 4 12 13 At3g07960 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 2 4 12 14 At3g10920 "superoxide dismutase [Mn], mitochondrial (SODA) / manganese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832" 2 4 12 15 At3g10970 haloacid dehalogenase-like hydrolase family protein low similarity to genetic modifier [Zea mays] GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 2 4 12 16 At3g11110 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 2 4 12 17 At3g11180 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to leucoanthocyanidin dioxygenase GB:BAA20143 [Perilla frutescens], Malus domestica, SP|P51091; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 2 4 12 18 At3g11330 leucine-rich repeat family protein 2 4 12 19 At3g11390 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 12 20 At3g11520 "cyclin, putative (CYC2) similar to cyclin [Arabidopsis thaliana] GI:1360646; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain; identical to cDNA cyclin box (cyc2) partial cds GI:456019" 2 4 12 21 At3g11560 expressed protein 2 4 12 22 At3g13950 expressed protein 2 4 12 23 At3g14000 expressed protein 2 4 12 24 At3g14120 expressed protein similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus norvegicus] 2 4 12 25 At3g14170 expressed protein 2 4 13 1 At3g14300 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 2 4 13 2 At3g14350 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase 1 GB:AAC27894 from [Zea mays]" 2 4 13 3 At3g14510 "geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative similar to gi:9294375; similar to geranylgeranyl pyrophosphate synthetase GB:P34802 [Arabidopsis thaliana]" 2 4 13 4 At3g14570 glycosyl transferase family 48 protein contains similarity to glucan synthases 2 4 13 5 At3g17130 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 13 6 At3g17185 expressed protein 2 4 13 7 At3g17320 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain 2 4 13 8 At3g17370 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 13 9 At3g17520 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to PIR|S04045|S04045 embryonic abundant protein D-29 [Gossypium hirsutum]; contains Pfam profile PF02987: Late embryogenesis abundant protein 2 4 13 10 At3g17580 hypothetical protein similar to hypothetical protein GB:AAD49763 from [Arabidopsis thaliana] 2 4 13 11 At3g17720 pyridoxal-dependent decarboxylase family protein similar to SP|P54767|DCE_LYCES Glutamate decarboxylase (EC 4.1.1.15) {Lycopersicon esculentum}; contains Pfam profile PF00282: Pyridoxal-dependent decarboxylase conserved domain 2 4 13 12 At3g17780 expressed protein 2 4 13 13 At3g20420 "ribonuclease III family protein similar to CAF protein (RNA helicase/RNAseIII) [Arabidopsis thaliana] GI:6102610; contains Pfam profiles: PF00636 RNase3 domain, PF00035 Double-stranded RNA binding motif" 2 4 13 14 At3g20480 tetraacyldisaccharide 4'-kinase family protein contains Pfam PF02606: tetraacyldisaccharide-1-P 4'-kinase 2 4 13 15 At3g20650 "mRNA capping enzyme family protein contains Pfam PF03291: mRNA capping enzyme, large subunit" 2 4 13 16 At3g20710 F-box protein-related contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain; contains weak hit to Pfam PF00646: F-box domain 2 4 13 17 At3g20865 "arabinogalactan-protein, putative (AGP) similar to gi|10880503|gb|AAG24281" 2 4 13 18 At3g20920 translocation protein-related contains weak similarity to Drosophila translocation protein 1 (GI:558181) [Drosophila melanogaster] 2 4 13 19 At3g21150 zinc finger (B-box type) family protein contains Pfam profile:PF01760 CONSTANS family zinc finger 2 4 13 20 At3g21180 "calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA9) identical to SP|Q9LU41 Potential calcium-transporting ATPase 9, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) {Arabidopsis thaliana}" 2 4 13 21 At3g23880 F-box family protein contains F-box domain Pfam:PF00646 2 4 13 22 At3g23940 dehydratase family contains Pfam profile: PF00920 dehydratase family 2 4 13 23 At3g24110 "calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand, similar to calcium-modulated proteins" 2 4 13 24 At3g24150 expressed protein 2 4 13 25 At3g24310 "myb family transcription factor similar to myb protein 305 GB:JQ0958 from [garden snapdragon] (Plant Cell (1991) 3 (2), 115-125);" 2 4 14 1 At3g24360 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein 2 4 14 2 At3g24520 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain 2 4 14 3 At3g24560 expressed protein contains Pfam profile PF01171: PP-loop family 2 4 14 4 At3g27325 expressed protein 2 4 14 5 At3g27380 "succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-1) nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1) [gi:12049598] from Arabidopsis thaliana" 2 4 14 6 At3g27540 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam profile PF04724 :Glycosyltransferase family 17" 2 4 14 7 At3g27600 hypothetical protein 2 4 14 8 At3g27800 hypothetical protein 2 4 14 9 At3g27860 PWWP domain-containing protein 2 4 14 10 At3g28030 "UV hypersensitive protein (UVH3) / DNA-repair protein, putative identical to UV hypersensitive protein [Arabidopsis thaliana] gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629 DNA-repair protein complementing XP-G cells homolog (Xeroderma pigmentosum group G complementing protein homolog) [Xenopus laevis]" 2 4 14 11 At3g28080 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 2 4 14 12 At3g32330 DNA repair protein-related weak similarity to SP|P41410 DNA repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces pombe} 2 4 14 13 At3g32903 hypothetical protein 2 4 14 14 At3g33520 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin 2 4 14 15 At3g42080 hypothetical protein hypothetical proteins - Arabidopsis thaliana 2 4 14 16 At3g42300 hypothetical protein 2 4 14 17 At3g42380 hypothetical protein 2 4 14 18 At3g42560 hypothetical protein 2 4 14 19 At3g42620 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 2 4 14 20 At3g45730 expressed protein 2 4 14 21 At3g45770 "oxidoreductase, zinc-binding dehydrogenase family protein similar to nuclear receptor binding factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724; contains Pfam zinc-binding dehydrogenase domain PF00107" 2 4 14 22 At3g45950 splicing factor-related similar to step II splicing factor SLU7 [Homo sapiens] GI:4249705 2 4 14 23 At3g46010 actin-depolymerizing factor 1 (ADF1) identical to SP|Q39250 Actin-depolymerizing factor 1 (ADF-1) (AtADF1) {Arabidopsis thaliana} 2 4 14 24 At3g46190 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 4 14 25 At3g46260 protein kinase-related contains low similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 2 4 15 1 At3g46440 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family 2 4 15 2 At3g46500 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin 20-oxidase from A. thaliana [gi:1109699], N. tabacum [GI:3402332]; contains Pfam profile: PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family" 2 4 15 3 At3g49290 expressed protein 2 4 15 4 At3g49330 invertase/pectin methylesterase inhibitor family protein contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 15 5 At3g49510 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain 2 4 15 6 At3g49570 expressed protein 2 4 15 7 At3g49750 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to resistance gene Hcr2-5B, Lycopersicon esculentum, EMBL:AF053997" 2 4 15 8 At3g49810 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 2 4 15 9 At3g49990 expressed protein 2 4 15 10 At3g50050 aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease 2 4 15 11 At3g52730 "ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein contains Pfam profile: PF05365 ubiquinol-cytochrome C reductase, UQCRX/QCR9 like" 2 4 15 12 At3g52780 purple acid phosphatase (PAP20) identical to purple acid phosphatase GI:20257491 from [Arabidopsis thaliana] 2 4 15 13 At3g52930 "fructose-bisphosphate aldolase, putative similar to SP|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic isozyme {Cicer arietinum}, cytosolic aldolase [Fragaria x ananassa] GI:10645188; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 2 4 15 14 At3g52970 "cytochrome P450 family protein cytochrome P450 76A2, eggplant, PIR:S38534" 2 4 15 15 At3g53150 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 2 4 15 16 At3g53210 nodulin MtN21 family protein similar to MtN21 [Medicago truncatula] GI:2598575; contains Pfam profile PF00892: Integral membrane protein 2 4 15 17 At3g53350 "myosin heavy chain-related low similarity to filamin-interacting protein S-FILIP [Rattus norvegicus] GI:21392397, nonmuscle heavy chain myosin II-A [Mus musculus] GI:17978023" 2 4 15 18 At3g53400 expressed protein 2 4 15 19 At3g56000 "glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 4 15 20 At3g56060 "glucose-methanol-choline (GMC) oxidoreductase family protein similar to mandelonitrile lyase from Prunus serotina [SP|P52706, SP|P52707]; contains Pfam profile PF00732 GMC oxidoreductase" 2 4 15 21 At3g56220 expressed protein 2 4 15 22 At3g56290 expressed protein 2 4 15 23 At3g56460 "oxidoreductase, zinc-binding dehydrogenase family protein low similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], zeta-crystallin / quinone reductase (NADPH) - Mus musculus, PIR:A54932; contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family" 2 4 15 24 At3g56520 "no apical meristem (NAM) family protein similar to nam-like protein 5 (GI:21105738 ) [Petunia x hybrida]; hypothetical protein SENU5, senescence up-regulated - Lycopersicon eculentum, PIR:T07182" 2 4 15 25 At3g56700 "male sterility protein, putative similar to SP|Q08891 Male sterility protein 2 {Arabidopsis thaliana}; contains Pfam profile PF03015: Male sterility protein" 2 4 16 1 At3g56760 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana tabacum] gi|16904226|gb|AAL30820" 2 4 16 2 At3g59580 RWP-RK domain-containing protein similar to nodule inception protein [Lotus japonicus] GI:6448579; contains Pfam profile: PF02042 RWP-RK domain 2 4 16 3 At3g59640 glycine-rich protein 2 4 16 4 At3g59790 "mitogen-activated protein kinase, putative / MAPK, putative (MPK10) mitogen-activated protein kinase (MAPK)(AtMPK10), PMID:12119167" 2 4 16 5 At3g59845 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; allyl alcohol dehydrogenase - Nicotiana tabacum, EMBL:AB036735" 2 4 16 6 At3g59990 "methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to Methionine aminopeptidase 2 (EC 3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo sapiens} SP|P50579; contains Pfam profile PF00557: metallopeptidase family M24; supporting cDNA gi|11344921|gb|AF300880.1|AF300880" 2 4 16 7 At3g60050 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 16 8 At3g60220 "zinc finger (C3HC4-type RING finger) family protein (ATL4) contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 16 9 At3g60260 phagocytosis and cell motility protein ELMO1-related contains weak similarity to ELMO1 [Mus musculus] gi|16118551|gb|AAL14464 2 4 16 10 At3g63000 "NPL4 family protein contains Pfam domain, PF05021: NPL4 family" 2 4 16 11 At3g63060 "circadian clock coupling factor, putative similar to gb:AAK56924 circadian clock coupling factor ZGT {Nicotiana tabacum}" 2 4 16 12 At3g63230 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 2 4 16 13 At3g63260 "protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 4 16 14 At3g63400 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9" 2 4 16 15 At3g63430 "expressed protein similarity to predicted protein, Arabidopsis thaliana" 2 4 16 16 At4g00060 nucleotidyltransferase family protein contains Pfam profile: PF01909 nucleotidyltransferase domain 2 4 16 17 At4g00120 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 2 4 16 18 At4g02480 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar to mitochondrial sorting protein 1 (MSP1) protein (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]" 2 4 16 19 At4g02530 chloroplast thylakoid lumen protein SP:022773 ;TL16_ARATH 2 4 16 20 At4g02680 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 2 4 16 21 At4g02725 expressed protein 2 4 16 22 At4g02900 early-responsive to dehydration protein-related / ERD protein-related similar to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 2 4 16 23 At4g02940 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to A. thaliana hypothetical protein T13L16.2, GenBank accession number 2708738; contains Pfam domain PF03171 2OG-Fe(II) oxygenase superfamily" 2 4 16 24 At4g03110 "RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding protein [Homo sapiens] GI:15341327, CUG-BP and ETR-3 like factor 3 [Homo sapiens] GI:12746392; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 2 4 16 25 At4g03153 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 2 4 17 1 At4g07943 "hypothetical protein similar to At4g05290, At3g42740, At5g35010, At5g36840, At3g43390, At2g14770, At2g05560, At4g08880, At1g34730" 2 4 17 2 At4g07990 DNAJ heat shock N-terminal domain-containing protein similar to SP|Q9QYI5 DnaJ homolog subfamily B member 10 Mus musculus ; contains Pfam profile PF00226 DnaJ domain 2 4 17 3 At4g08190 "Ras-related GTP-binding protein, putative similar to Ras-related protein Rab11A (Swiss-Prot:Q96283) [Arabidopsis thaliana]" 2 4 17 4 At4g08250 "scarecrow transcription factor family protein SCARECROW - Arabidopsis thaliana, PID:g1497987" 2 4 17 5 At4g08395 hypothetical protein 2 4 17 6 At4g08460 expressed protein 2 4 17 7 At4g08652 hypothetical protein 2 4 17 8 At4g08710 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 2 4 17 9 At4g11540 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 17 10 At4g11600 "glutathione peroxidase, putative " 2 4 17 11 At4g11770 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 2 4 17 12 At4g11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase identical to Hydroxymethylglutaryl-CoA synthase (EC 4.1.3.5) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl coenzyme A synthase) (Swiss-Prot:P54873) [Arabidopsis thaliana] 2 4 17 13 At4g11980 MutT/nudix family protein low similarity to SP|P54570 ADP-ribose pyrophosphatase (EC 3.6.1.13) {Bacillus subtilis}; contains Pfam profile PF00293: NUDIX domain 2 4 17 14 At4g12030 bile acid:sodium symporter family protein low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family 2 4 17 15 At4g12220 hypothetical protein 2 4 17 16 At4g12280 "copper amine oxidase family protein contains Pfam domain, PF01179: Copper amine oxidase, enzyme domain" 2 4 17 17 At4g14780 "protein kinase, putative similar to protein kinase ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079" 2 4 17 18 At4g14820 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 17 19 At4g14960 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} 2 4 17 20 At4g15010 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 2 4 17 21 At4g15140 expressed protein 2 4 17 22 At4g15210 "beta-amylase (BMY1) / 1,4-alpha-D-glucan maltohydrolase identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) SP:P25853 [Arabidopsis thaliana]" 2 4 17 23 At4g15360 cytochrome P450 family protein 2 4 17 24 At4g15400 "transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], benzylalcohol acetyltransferase [Clarkia breweri][GI:6166336][PMID:10588064]" 2 4 17 25 At4g17880 "basic helix-loop-helix (bHLH) family protein bHLH protein, Arabidopsis thaliana, PATCHX:E255557" 2 4 18 1 At4g17930 hypothetical protein 2 4 18 2 At4g18070 expressed protein 2 4 18 3 At4g18130 phytochrome E (PHYE) identical to SP|P42498 Phytochrome E {Arabidopsis thaliana} 2 4 18 4 At4g18310 hypothetical protein 2 4 18 5 At4g18340 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 2 4 18 6 At4g18460 D-Tyr-tRNA(Tyr) deacylase family protein contains Pfam profile: PF02580 D-Tyr-tRNA(Tyr) deacylase 2 4 18 7 At4g18520 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 18 8 At4g21310 "expressed protein predicted protein, Arabidopsis thaliana" 2 4 18 9 At4g21350 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582198; contains Pfam profile PF04564: U-box domain 2 4 18 10 At4g21510 F-box family protein contains Pfam PF00646: F-box domain; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 18 11 At4g21560 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 2 4 18 12 At4g21710 DNA-directed RNA polymerase II 135 kDa polypeptide / RNA polymerase II subunit 2 (RPB135) (RPB2) (RP140) identical to SP|P38420 DNA-directed RNA polymerase II 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 2) {Arabidopsis thaliana} 2 4 18 13 At4g21780 expressed protein 2 4 18 14 At4g21920 expressed protein 2 4 18 15 At4g21980 "autophagy 8a (APG8a) identical to autophagy 8a [Arabidopsis thaliana] GI:19912151; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 2 4 18 16 At4g24520 "NADPH-cytochrome p450 reductase, putative / NADPH-ferrihemoprotein reductase, putative similar to NADPH-ferrihemoprotein reductase NADPH-cytochrome P450 oxydoreductase isoform 1 [Populus balsamifera subsp. trichocarpa x Populus deltoides] GI:13183562, SP|P37116 NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR) [Vigna radiata] {Phaseolus aureus}" 2 4 18 17 At4g24560 "ubiquitin-specific protease 16, putative (UBP16) similar to ubiquitin-specific protease 16 GI:11993477 [Arabidopsis thaliana]" 2 4 18 18 At4g24730 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase 2 4 18 19 At4g24760 expressed protein 2 4 18 20 At4g24950 hypothetical protein 2 4 18 21 At4g24990 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 2 4 18 22 At4g25160 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 2 4 18 23 At4g25220 "transporter, putative similar to glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982" 2 4 18 24 At4g27780 acyl-CoA binding protein 2 (ACBP2) identical to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057 2 4 18 25 At4g27810 hypothetical protein 2 4 19 1 At4g27970 C4-dicarboxylate transporter/malic acid transport family protein contains Pfam profile PF03595: C4-dicarboxylate transporter/malic acid transport protein 2 4 19 2 At4g28020 expressed protein contains Pfam PF01980: Uncharacterised protein family 2 4 19 3 At4g28160 hydroxyproline-rich glycoprotein family protein similar to Putative cell wall protein precursor (Swiss-Prot:P47925) [Arabidopsis thaliana] 2 4 19 4 At4g28220 "NADH dehydrogenase-related similar to 64 kDa mitochondrial NADH dehydrogenase [Neurospora crassa] GI:4753821, alternative NADH-dehydrogenase [Yarrowia lipolytica] GI:3718005; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase" 2 4 19 5 At4g28370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam PF00097: Zinc finger, C3HC4 type (RING finger)" 2 4 19 6 At4g28410 aminotransferase-related similar to nicotianamine aminotransferase [Hordeum vulgare subsp. vulgare] GI:6469090 2 4 19 7 At4g31020 expressed protein 2 4 19 8 At4g31060 "AP2 domain-containing transcription factor, putative TINY, Arabidopsis thaliana, PID:E218696" 2 4 19 9 At4g31200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein related to DAN26 [Homo sapiens] gi|1770394|emb|CAA69591 2 4 19 10 At4g31270 expressed protein 2 4 19 11 At4g31430 expressed protein 2 4 19 12 At4g31490 "coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative similar to Coatomer beta subunit (Beta-coat protein) (Beta-COP) from {Rattus norvegicus} SP|P23514, {Mus musculus} SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam profile: PF01602 Adaptin N terminal region" 2 4 19 13 At4g31630 "transcriptional factor B3 family protein similar to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 2 4 19 14 At4g31690 "transcriptional factor B3 family protein similar to reproductive meristem gene 1 from [Brassica oleracea var. botrytis] GI:3170424, [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain" 2 4 19 15 At4g34190 stress enhanced protein 1 (SEP1) identical to stress enhanced protein 1 (SEP1) GI:7384978 from [Arabidopsis thaliana] 2 4 19 16 At4g34230 "cinnamyl-alcohol dehydrogenase, putative similar to cinnamyl alcohol dehydrogenase, Nicotiana tabacum [SP|P30359], Populus deltoides, PATCHX:G288753" 2 4 19 17 At4g34360 "protease-related similar to PIR|I46078 endothelin converting enzyme, Bos primigenius taurus" 2 4 19 18 At4g34412 expressed protein 2 4 19 19 At4g34570 bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (THY-2) identical to SP|Q05763 2 4 19 20 At4g34630 expressed protein 2 4 19 21 At4g34810 "auxin-responsive family protein similar to auxin-induced protein X10A5 (SP:P33079) [Glycine max]; small auxin up RNA (SAUR-AC1), Arabidopsis thaliana, PIR2:T06084" 2 4 19 22 At4g34870 "peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP1) / rotamase identical to cyclophilin (CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Catharanthus roseus] SWISS-PROT:Q39613" 2 4 19 23 AT5G57480 PC-1 D11 2 4 19 24 3XSSC PC-1 D23 2 4 19 25 AT1G29930 PC-1 H11 2 4 20 1 3XSSC PC-1 H23 2 4 20 2 AT3G44150 PC-1 L11 2 4 20 3 3XSSC PC-1 L23 2 4 20 4 AT4G00810 PC-1 P11 2 4 20 5 3XSSC PC-1 P23 2 4 20 6 At4g37490 G2/mitotic-specific cyclin (CYC1) / B-like cyclin (CYC1) identical to SP|P30183 G2/mitotic-specific cyclin (B-like cyclin) {Arabidopsis thaliana} 2 4 20 7 At4g37550 "formamidase, putative / formamide amidohydrolase, putative similar to SP|Q50228 Formamidase (EC 3.5.1.49) (Formamide amidohydrolase) {Methylophilus methylotrophus}; contains Pfam profile PF03069: Acetamidase/Formamidase family" 2 4 20 8 At4g37710 VQ motif-containing protein contains PF05678: VQ motif 2 4 20 9 At4g37770 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to 1-aminocyclopropane-1-carboxylate synthase, Arabidopsis thaliana, GI:940370 [S71174]" 2 4 20 10 At4g37950 expressed protein 2 4 20 11 At4g38020 "tRNA/rRNA methyltransferase (SpoU) family protein similar to SP|P18644 rRNA (adenosine-2'-O-)-methyltransferase (EC 2.1.1.66) {Streptomyces cyaneus}; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 2 4 20 12 At4g38160 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 2 4 20 13 At4g38200 guanine nucleotide exchange family protein similar to Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Homo sapiens] SP|Q9Y6D5; contains Pfam profile PF01369: Sec7 domain 2 4 20 14 At5g01620 expressed protein several hypothetical proteins - Arabidopsis thaliana 2 4 20 15 At5g01670 "aldose reductase, putative similar to aldose reductase [Hordeum vulgare][GI:728592], aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944]" 2 4 20 16 At5g01810 CBL-interacting protein kinase 15 (CIPK15) identical to CBL-interacting protein kinase 15 [Arabidopsis thaliana] gi|13249134|gb|AAK16692; identical to novel serine/threonine protein kinase [Arabidopsis thaliana] gi|1777312|dbj|BAA06311; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain 2 4 20 17 At5g01870 "lipid transfer protein, putative similar to lipid transfer protein 6 from Arabidopsis thaliana [gi:8571927]; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 4 20 18 At5g02030 homeodomain protein (BELLRINGER) several homeodomain proteins; 2 4 20 19 At5g02070 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 2 4 20 20 At5g02240 expressed protein 2 4 20 21 At5g02290 "protein kinase, putative similar to protein kinase APK1A [Arabidopsis thaliana] SWISS-PROT:Q06548" 2 4 20 22 At5g05020 expressed protein 2 4 20 23 At5g05080 "ubiquitin-conjugating enzyme, putative similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24 kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin carrier protein) {Homo sapiens}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme" 2 4 20 24 At5g05260 cytochrome P450 79A2 (CYP79A2) identical to SP|Q9FLC8 Cytochrome P450 79A2 (EC 1.-.-.-) {Arabidopsis thaliana} 2 4 20 25 At5g05310 expressed protein 2 4 21 1 At5g05450 "DEAD/DEAH box helicase, putative (RH18) " 2 4 21 2 At5g05500 "pollen Ole e 1 allergen and extensin family protein contains Pfam domain, PF01190: Pollen proteins Ole e I family" 2 4 21 3 At5g05640 nucleoprotein-related contains weak similarity to Swiss-Prot:P03515 nucleocapsid protein (Nucleoprotein) [Punta toro phlebovirus] 2 4 21 4 At5g05670 expressed protein 2 4 21 5 At5g08340 riboflavin biosynthesis protein-related contains weak similarity to Riboflavin biosynthesis protein ribF. (Swiss-Prot:P08391) [Escherichia coli O157:H7] 2 4 21 6 At5g08390 "transducin family protein / WD-40 repeat family protein similar to katanin p80 subunit [Strongylocentrotus purpuratus] GI:3005601; contains Pfam profile PF00400: WD domain, G-beta repeat" 2 4 21 7 At5g08535 "D111/G-patch domain-containing protein contains Pfam profile PF01585: G-patch domain; contains a 2nt micro-exon, as identified using GeneSeqer." 2 4 21 8 At5g08565 expressed protein 2 4 21 9 At5g08750 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 2 4 21 10 At5g09225 expressed protein 2 4 21 11 At5g09330 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365: No apical meristem (NAM) protein 2 4 21 12 At5g09370 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein - Hordeum vulgare, EMBL:AF109195; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 2 4 21 13 At5g12140 "cysteine protease inhibitor, putative / cystatin, putative similar to SP|P31726 Cystatin I precursor (CORN kernel cysteine proteinase inhibitor) {Zea mays}; contains Pfam profile PF00031: Cystatin domain" 2 4 21 14 At5g12200 dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) identical to dihydropyrimidine amidohydrolase (PYD2) [Arabidopsis thaliana] GI:28194047; similar to SP|Q9EQF5 Dihydropyrimidinase (EC 3.5.2.2) (DHPase) (Hydantoinase) (DHP) {Mus musculus}; contains Pfam profile PF01979: Amidohydrolase family 2 4 21 15 At5g12340 expressed protein ; expression supported by MPSS 2 4 21 16 At5g12400 "PHD finger transcription factor, putative similarity to predicted proteins, Arabidopsis thaliana" 2 4 21 17 At5g12920 expressed protein contains 3 weak WD-40 repeats (PF00400); low similarity to MEK kinase alpha (GI:4028547); transcriptional repressor TUP1 (GI:3406654) [Dictyostelium discoideum]; Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (TGF-beta receptor interacting protein 1) (TRIP-1) (SP:Q38884) [Arabidopsis thaliana] 2 4 21 18 At5g12980 "rcd1-like cell differentiation protein, putative similar to protein involved in sexual development [Schizosaccharomyces pombe] GI:1620896; contains Pfam profile PF04078: Cell differentiation family, Rcd1-like" 2 4 21 19 At5g13170 "nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula]; identical to cDNA senescence-associated protein (SAG29) mRNA, partial cds GI:4426938" 2 4 21 20 At5g13220 expressed protein 2 4 21 21 At5g15950 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase 2 4 21 22 At5g16010 "3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to steroid 5alpha-reductase - Rattus norvegicus, PIR:A34239 [SP|24008]; contains Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544" 2 4 21 23 At5g16190 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 2 4 21 24 At5g16250 expressed protein 2 4 21 25 At5g16390 biotin carboxyl carrier protein 1 (BCCP1) identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor [Arabidopsis thaliana] gi|9759121|dbj|BAB09606 2 4 22 1 At5g16430 hypothetical protein 2 4 22 2 At5g16600 myb family transcription factor (MYB43) contains PFAM profile: myb DNA binding domain PF00249 2 4 22 3 At5g16650 DNAJ heat shock N-terminal domain-containing protein similar to SP|P30725 Chaperone protein dnaJ Clostridium acetobutylicum; contains Pfam profile PF00226: DnaJ domain 2 4 22 4 At5g19210 "DEAD/DEAH box helicase, putative EUKARYOTIC INITIATION FACTOR 4A-II (EIF-4A-II), Homo sapiens, SWISSPROT:IF42_HUMAN" 2 4 22 5 At5g19270 hypothetical protein 2 4 22 6 At5g19420 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 2 4 22 7 At5g19470 MutT/nudix family protein similar to SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain 2 4 22 8 At5g19650 "ovate protein, putative 84% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568" 2 4 22 9 At5g19710 "hypothetical protein HPt phosphotransmitter - Arabidopsis thaliana, EMBL:AB041766" 2 4 22 10 At5g19875 expressed protein 2 4 22 11 At5g19930 integral membrane family protein contains Pfam domain PF01940: Integral membrane protein 2 4 22 12 At5g23250 "succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative similar to SP|P36967 Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) {Dictyostelium discoideum}; contains Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding domain" 2 4 22 13 At5g23290 "c-myc binding protein, putative / prefoldin, putative similar to Swiss-Prot:Q99471 prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1) [Homo sapiens]" 2 4 22 14 At5g23430 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] 2 4 22 15 At5g23470 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 2 4 22 16 At5g23660 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] 2 4 22 17 At5g23720 "dual specificity protein phosphatase family protein contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain; contains TG acceptor splice site at intron 9" 2 4 22 18 At5g23860 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| 2 4 22 19 At5g23910 kinesin motor protein-related 2 4 22 20 At5g26600 expressed protein weak similarity to SP|P18549 Isopenicillin N epimerase (EC 5.-.- ) {Streptomyces clavuligerus} 2 4 22 21 At5g26770 expressed protein 2 4 22 22 At5g26920 calmodulin-binding protein similar to calmodulin-binding protein TCB60 GI:1698548 from [Nicotiana tabacum] 2 4 22 23 At5g26980 syntaxin 41 (SYP41) / TLG2a identical to SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis thaliana} 2 4 22 24 At5g27170 hypothetical protein 2 4 22 25 At5g27240 DNAJ heat shock N-terminal domain-containing protein 2 4 23 1 At5g27430 signal peptidase subunit family protein contains Pfam profile: PF04573 signal peptidase subunit 2 4 23 2 At5g27500 hypothetical protein hypothetical proteins - Arabidopsis thaliana 2 4 23 3 At5g35540 hypothetical protein 2 4 23 4 At5g35600 "histone deacetylase, putative (HDA7) similar to SP|O22446 Histone deacetylase (HD) {Arabidopsis thaliana}; contains Pfam profile PF00850: Histone deacetylase family" 2 4 23 5 At5g35715 "cytochrome P450 71B8, putative (CYP71B8) nearly identical to Cytochrome P450 71B8 (SP:P58048) [Arabidopsis thaliana];" 2 4 23 6 At5g35750 histidine kinase (AHK2) identical to histidine kinase AHK2 [Arabidopsis thaliana] gi|13537196|dbj|BAB40774 2 4 23 7 At5g35920 "cytochrome P450, putative similar to cytochrome P450 [Sinapis alba] gi|3283433|gb|AAD03415" 2 4 23 8 At5g35970 "DNA-binding protein, putative similar to SWISS-PROT:Q60560 DNA-binding protein SMUBP-2 (Immunoglobulin MU binding protein 2, SMUBP-2) [Mesocricetus auratus]" 2 4 23 9 At5g36140 cytochrome P450-related similar to taxane 13-alpha-hydroxylase [Taxus cuspidata] GI:17148242 2 4 23 10 At5g36180 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P37890) [Oryza sativa] 2 4 23 11 At5g39410 expressed protein 2 4 23 12 At5g39470 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 2 4 23 13 At5g39650 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) 2 4 23 14 At5g39710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 2 4 23 15 At5g39870 hypothetical protein 2 4 23 16 At5g39930 expressed protein ; expression supported by MPSS 2 4 23 17 At5g40110 hypothetical protein 2 4 23 18 At5g40170 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4 [Lycopersicon hirsutum] gi|2808683|emb|CAA05268" 2 4 23 19 At5g42900 expressed protein similar to unknown protein (pir||T05226) 2 4 23 20 At5g42930 lipase class 3 family protein low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) [Rhizomucor miehei] GI:230348; contains Pfam profile PF01764: Lipase 2 4 23 21 At5g43080 "cyclin, putative similar to A-type cyclins from [Nicotiana tabacum] GI:1064931, [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 2 4 23 22 At5g43140 "peroxisomal membrane 22 kDa family protein contains Mpv17 / PMP22 family domain, Pfam:PF04117" 2 4 23 23 At5g43300 glycerophosphoryl diester phosphodiesterase family protein contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 2 4 23 24 At5g43360 inorganic phosphate transporter (PHT3) identical to inorganic phosphate transporter [Arabidopsis thaliana] GI:2780347 2 4 23 25 At5g43500 expressed protein 2 4 24 1 At5g43560 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 2 4 24 2 At5g46130 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 2 4 24 3 At5g46160 ribosomal protein L14 family protein / huellenlos paralog (HLP) contains Pfam profile PF00238: Ribosomal protein L14p/L23e; identical to cDNA HUELLENLOS PARALOG (HLP) nuclear gene for mitochondrial product GU:18140859 2 4 24 4 At5g46300 expressed protein 2 4 24 5 At5g46360 "outward rectifying potassium channel, putative (KCO3) identical to KCO3 protein [Arabidopsis thaliana] gi|4583550|emb|CAB40380; similar to kco1 [Arabidopsis thaliana] gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563" 2 4 24 6 At5g46510 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 2 4 24 7 At5g46570 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 24 8 At5g46730 glycine-rich protein 2 4 24 9 At5g46790 expressed protein similar to unknown protein (pir||T05073) 2 4 24 10 At5g49420 MADS-box protein (AGL84) contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 2 4 24 11 At5g49470 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 2 4 24 12 At5g49620 "myb family transcription factor (MYB78) contains PFAM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB78) mRNA, partial cds GI:3941509" 2 4 24 13 At5g49660 "leucine-rich repeat transmembrane protein kinase, putative contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 2 4 24 14 At5g49810 methionine S-methyltransferase identical to methionine S-methyltransferase [Arabidopsis thaliana] GI:5733429 2 4 24 15 At5g49870 jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767; contains Pfam profile PF01419 jacalin-like lectin domain 2 4 24 16 At5g50030 invertase/pectin methylesterase inhibitor family protein contains similarity to pollen-specific protein Bnm1 Brassica napus GI:1857671; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 2 4 24 17 At5g50090 expressed protein 2 4 24 18 At5g52840 NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 13 kDa-B subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-13Kd-B) (CI-13Kd-B) (Complex I subunit B13) (Swiss-Prot:Q63362) [Rattus norvegicus] 2 4 24 19 At5g52900 expressed protein 2 4 24 20 At5g53045 expressed protein 2 4 24 21 At5g53090 "oxidoreductase, putative similar to forever young oxidoreductase (FEY3) GI:12004621 from [Arabidopsis thaliana]" 2 4 24 22 At5g53260 seed maturation family protein similar to SP|P09444 Late embryogenesis abundant protein D-34 (LEA D-34) {Gossypium hirsutum}; contains Pfam profile PF04927: Seed maturation protein 2 4 24 23 At5g53320 "leucine-rich repeat transmembrane protein kinase, putative " 2 4 24 24 At5g53490 "thylakoid lumenal 17.4 kDa protein, chloroplast identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}" 2 4 24 25 At5g53540 "MSP1 protein, putative / intramitochondrial sorting protein, putative similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) [Saccharomyces cerevisiae]; contains Pfam domain, PF00004: ATPase, AAA family" 2 4 25 1 At5g56200 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 2 4 25 2 At5g56260 dimethylmenaquinone methyltransferase family protein similar to bacterial S-adenosylmethionine:2-demethylmenaquinone methyltransferases; contains Pfam profile PF03737: Dimethylmenaquinone methyltransferase 2 4 25 3 At5g56420 F-box family protein contains F-box domain Pfam:PF00646 2 4 25 4 At5g56480 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 2 4 25 5 At5g56660 IAA-amino acid hydrolase 2 (ILL2) identical to IAA-amino acid hydrolase homolog 2 precursor [Arabidopsis thaliana] SWISS-PROT:P54970 2 4 25 6 At5g56720 "malate dehydrogenase, cytosolic, putative similar to cytosolic malate dehydrogenase from Mesembryanthemum crystallinum [SP|O24047], Medicago sativa [SP|O48905], Prunus persica [GI:15982948]; contains InterPro entry IPR001236: Lactate/malate dehydrogenase" 2 4 25 7 At5g56900 "CwfJ-like family protein / zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF04677: Protein similar to CwfJ C-terminus 1, PF04676: Protein similar to CwfJ C-terminus 2" 2 4 25 8 At5g56950 "nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP)" 2 4 25 9 At5g59460 "scarecrow-like transcription factor 11 (SCL11) identical to cDNA scarecrow-like 11 (SCL11) mRNA, partial cds gi:4580526" 2 4 25 10 At5g59500 expressed protein 2 4 25 11 At5g59690 "histone H4 identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum SP|P02308, Acropora formosa GI:455652, Citrus jambhiri GI:16797797" 2 4 25 12 At5g59750 "riboflavin biosynthesis protein, putative similar to SP|P50855 Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] {Actinobacillus pleuropneumoniae}; contains Pfam profiles PF00925: GTP cyclohydrolase II, PF00926: 3,4-dihydroxy-2-butanone 4-phosphate synthase" 2 4 25 13 At5g59880 actin-depolymerizing factor 3 (ADF3) identical to SP|Q9ZSK4 Actin-depolymerizing factor 3 (ADF 3) (AtADF3) {Arabidopsis thaliana} 2 4 25 14 At5g59920 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 2 4 25 15 At5g60080 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 2 4 25 16 At5g60140 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 2 4 25 17 At5g62800 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family 2 4 25 18 At5g62860 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain 2 4 25 19 At5g63030 "glutaredoxin, putative similar to glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699" 2 4 25 20 At5g63070 "40S ribosomal protein S15, putative " 2 4 25 21 At5g63200 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|P28290 Sperm-specific antigen 2 (Cleavage signal-1 protein) (CS-1) Homo sapiens; contains Pfam profile PF00515: TPR Domain 2 4 25 22 At5g63270 "nitrate-responsive NOI protein, putative similar to nitrate-induced NOI protein [Zea mays] GI:2642213" 2 4 25 23 At5g63450 "cytochrome P450, putative " 2 4 25 24 At5g63490 "CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein contains Pfam profiles: PF00571 CBS domain, PF00564: PB1 domain" 2 4 25 25 At5g66030 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| 2 4 26 1 At5g66050 expressed protein 2 4 26 2 At5g66160 "protease-associated zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF02225: protease-associated (PA) domain and Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger); similar to ReMembR-H2 protein JR702 [Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical to cDNA ReMembR-H2 protein JR700 mRNA, complete cds GI:6942146" 2 4 26 3 At5g66210 "calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand" 2 4 26 4 At5g66320 zinc finger (GATA type) family protein 2 4 26 5 At5g66360 "ribosomal RNA adenine dimethylase family protein similar to SP|P41819 Dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces cerevisiae}; contains Pfam profile PF00398: ribosomal RNA adenine dimethylase family protein" 2 4 26 6 At5g66540 expressed protein ; supported by full-Length cDNA gi:12057175 from [Arabidopsis thaliana] 2 4 26 7 At5g66600 "expressed protein contains Pfam profile PF04784: Protein of unknown function, DUF547; expression supported by MPSS" 2 4 26 8 3xSSC 3xSSC 2 4 26 9 3xSSC 3xSSC 2 4 26 10 3xSSC 3xSSC 2 4 26 11 3xSSC 3xSSC 2 4 26 12 3xSSC 3xSSC 2 4 26 13 3xSSC 3xSSC 2 4 26 14 3xSSC 3xSSC 2 4 26 15 3xSSC 3xSSC 2 4 26 16 atc05 Randomly generated negative control 2 4 26 17 atc11 Randomly generated negative control 2 4 26 18 At5g46430 60S ribosomal protein L32 (RPL32B) 2 4 26 19 atc01 Randomly generated negative control 2 4 26 20 Alien7 Control: Stratagene Spotreport Alien Oligo 2 4 26 21 At1g74970 ribosomal protein S9 (RPS9) identical to ribosomal protein S9 [Arabidopsis thaliana] GI:5456946 2 4 26 22 atc09 Randomly generated negative control 2 4 26 23 Alien3 Control: Stratagene Spotreport Alien Oligo 2 4 26 24 Blank Blank 2 4 26 25 Blank Blank 3 1 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 1 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 1 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 3 1 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 3 1 1 5 atc06 Randomly generated negative control 3 1 1 6 atc12 Randomly generated negative control 3 1 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 1 1 8 atc02 Randomly generated negative control 3 1 1 9 At1g01940 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 3 1 1 10 At1g02000 "NAD-dependent epimerase/dehydratase family protein similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia coli] GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family" 3 1 1 11 At1g02100 leucine carboxyl methyltransferase family protein contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} 3 1 1 12 At1g02140 "mago nashi family protein similar to Mago Nashi, Genbank Accession Number U03559; contains Pfam PF02792: Mago nashi protein domain" 3 1 1 13 At1g02300 "cathepsin B-like cysteine protease, putative similar to cathepsin B-like cysteine proteinase GI:609175 from [Nicotiana rustica]" 3 1 1 14 At1g02350 protoporphyrinogen oxidase-related contains very low similarity to protoporphyrinogen oxidase [SP|P55826] 3 1 1 15 At1g02520 "multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]" 3 1 1 16 At1g02580 maternal embryogenesis control protein / MEDEA (MEA) nearly identical to MEDEA GB:AAC39446 GI:3089625 from [Arabidopsis thaliana]; contains Pfam profile PF00856: SET domain 3 1 1 17 At1g05190 "ribosomal protein L6 family protein Similar to Mycobacterium RlpF (gb|Z84395). ESTs gb|T75785,gb|R30580,gb|T04698 come from this gene" 3 1 1 18 At1g05240 "peroxidase, putative similar to peroxidase; peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334" 3 1 1 19 At1g05410 expressed protein 3 1 1 20 At1g05450 protease inhibitor/seed storage/lipid transfer protein (LTP)-related similar to geranyl diphosphate synthase large subunit [Mentha x piperita] GI:6449052 3 1 1 21 At1g05610 "glucose-1-phosphate adenylyltransferase, putative / ADP-glucose pyrophosphorylase, putative (APS2) similar to SP|P52416 from [Vicia faba]; contains Pfam profile PF00483: Nucleotidyl transferase; identical to cDNA GI:31408039" 3 1 1 22 At1g05660 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 5 [Lycopersicon esculentum] GI:2459817; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 1 1 23 At1g05790 lipase class 3 family protein contains Pfam profile PF01764: Lipase 3 1 1 24 At1g05840 aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease 3 1 1 25 At1g08320 bZIP family transcription factor contains Pfam profile: PF00170 bZIP transcription factor 3 1 2 1 At1g08390 expressed protein 3 1 2 2 At1g08560 syntaxin-related protein KNOLLE (KN) / syntaxin 111 (SYP111) identical to SP|Q42374 Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111) {Arabidopsis thaliana}; BAC F22O13 has a deletion of a cytosine at position 7887 3 1 2 3 At1g08620 "transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains Pfam domains, PF02375: jmjN domain, PF02373: jmjC domain and PF02928: C5HC2 zinc finger" 3 1 2 4 At1g08750 "GPI-anchor transamidase, putative similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family" 3 1 2 5 At1g08800 "expressed protein weak similarity to SP|Q02455 Myosin-like protein MLP1 {Saccharomyces cerevisiae}; contains Pfam profile PF04576: Protein of unknown function, DUF593" 3 1 2 6 At1g08960 "cation exchanger, putative (CAX11) similar to sodium/calcium exchanger protein [Mus musculus] gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 3 1 2 7 At1g09010 glycoside hydrolase family 2 protein low similarity to mannosidase [gi:5359712] from Cellulomonas fimi 3 1 2 8 At1g11610 "cytochrome P450, putative very strong similarity to cytochrome P450 (SP:Q9SAB6) [Arabidopsis thaliana]; is a member of the PF|00067 Cytochrome P450 family" 3 1 2 9 At1g11655 expressed protein 3 1 2 10 At1g11820 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 3 1 2 11 At1g11870 "seryl-tRNA synthetase, putative / serine--tRNA ligase, putative similar to PIR|T03949 serine--tRNA ligase (EC 6.1.1.11) serS {Zea mays}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF02403: Seryl-tRNA synthetase N-terminal domain" 3 1 2 12 At1g11980 "ubiquitin family protein similar to Chain A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726 from [Arabidopsis thaliana]" 3 1 2 13 At1g12040 "leucine-rich repeat family protein / extensin family protein (LRX1) similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 1 2 14 At1g12200 flavin-containing monooxygenase family protein / FMO family protein low similarity to FMO2 from Homo sapiens [SP|Q99518]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like 3 1 2 15 At1g12260 no apical meristem (NAM) family protein similar to NAC2 (GI:6456751) [Arabidopsis thaliana]; contains Pfam PF02365 : No apical meristem (NAM) protein 3 1 2 16 At1g15020 "thioredoxin family protein low similarity to FAD-dependent sulfhydryl oxidase-2 [Rattus norvegicus] GI:12483919; contains Pfam profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr family" 3 1 2 17 At1g15060 expressed protein 3 1 2 18 At1g15215 expressed protein 3 1 2 19 At1g15230 "expressed protein ESTs gb|R30529, gb|Z48463, gb|Z48467, gb|AA597369 and gb|AA394772 come from this gene" 3 1 2 20 At1g15390 "peptide deformylase, mitochondrial / polypeptide deformylase 1A (PDF1A) nearly identical to SP|Q9FV53 Peptide deformylase, mitochondrial precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; contains Pfam profile PF01327: polypeptide deformylase; supporting cDNA gi|11320951|gb|AF250959.1|AF250959" 3 1 2 21 At1g15420 expressed protein 3 1 2 22 At1g15600 hypothetical protein 3 1 2 23 At1g15670 "kelch repeat-containing F-box family protein similar to SP|Q9ER30 Kelch-related protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 1 2 24 At1g18450 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| 3 1 2 25 At1g18490 expressed protein 3 1 3 1 At1g18660 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 3 1 3 2 At1g18720 expressed protein similar to YGL010w-like protein GI:2982301 from [Picea mariana] 3 1 3 3 At1g18910 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 3 4 At1g18980 "germin-like protein, putative similar to germin-like protein subfamily T member 1 [SP|P92995]; contains PS00725 germin family signature" 3 1 3 5 At1g19110 inter-alpha-trypsin inhibitor heavy chain-related similar to SP|Q61704 Inter-alpha-trypsin inhibitor heavy chain H3 precursor {Mus musculus}; contains Pfam profile PF00092: von Willebrand factor type A domain 3 1 3 6 At1g19150 "chlorophyll A-B binding protein, putative / LHCI type II, putative very strong similarity to PSI type II chlorophyll a/b-binding protein Lhca2*1 GI:541565 from [Arabidopsis thaliana]; contains Pfam profile: PF00504 chlorophyll A-B binding protein" 3 1 3 7 At1g22060 expressed protein 3 1 3 8 At1g22120 hypothetical protein 3 1 3 9 At1g22275 expressed protein 3 1 3 10 At1g22300 "14-3-3 protein GF14 epsilon (GRF10) identical to 14-3-3 protein GF14 epsilon GI:5802798, SP:P48347 from [Arabidopsis thaliana]" 3 1 3 11 At1g22450 "cytochrome c oxidase subunit 6b, putative (COX6b) nearly identical to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] GI:6518353" 3 1 3 12 At1g22510 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 3 13 At1g22680 hypothetical protein 3 1 3 14 At1g22740 "Ras-related protein (RAB7) / AtRab75 / small GTP-binding protein, putative identical to SP:O04157 Ras-related protein Rab7 (AtRab75) [Arabidopsis thaliana]" 3 1 3 15 At1g26270 phosphatidylinositol 3- and 4-kinase family protein similar to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 3 1 3 16 At1g26330 hypothetical protein 3 1 3 17 At1g26520 cobalamin synthesis/P47K family protein similar to dopamine-responsive protein [Homo sapiens] GI:13177623; contains Pfam profile PF02492: Cobalamin synthesis protein/P47K 3 1 3 18 At1g26580 expressed protein similar to putative MYB family transcription factor GB:AAD17429 GI:4335752 from [Arabidopsis thaliana] 3 1 3 19 At1g26730 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 3 1 3 20 At1g26790 Dof-type zinc finger domain-containing protein similar to H-protein promoter binding factor-2b GI:3386548 from [Arabidopsis thaliana] 3 1 3 21 At1g26930 "kelch repeat-containing F-box family protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646 F-box domain" 3 1 3 22 At1g27000 bZIP family transcription factor 3 1 3 23 At1g29890 acetyltransferase-related low similarity to O-acetyltransferase [Cryptococcus neoformans var. neoformans] GI:17063556 3 1 3 24 At1g29950 expressed protein 3 1 3 25 At1g30100 "9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative similar to 9-cis-epoxycarotenoid dioxygenase GI:6715257 from [Phaseolus vulgaris]" 3 1 4 1 At1g30135 expressed protein 3 1 4 2 At1g30350 pectate lyase family protein similar to pectate lyase GP:14289169 from [Salix gilgiana];contains Pfam profile: PF00544: Pectate lyase 3 1 4 3 At1g30420 "ATP-binding cassette transport protein, putative contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region" 3 1 4 4 At1g30560 "transporter, putative similar to glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982" 3 1 4 5 At1g30620 "UDP-D-xylose 4-epimerase, putative (MUR4) similar to SP|P55180 UDP-glucose 4-epimerase (EC 5.1.3.2) from Bacillus subtilis, GI:3021357 UDP-galactose 4-epimerase from Cyamopsis tetragonoloba; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains TIGRfam profile TIGR01179: UDP-glucose 4-epimerase" 3 1 4 6 At1g33600 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to gi|9294355|dbj|BAB02252 [Arabidopsis thaliana]" 3 1 4 7 At1g33700 "expressed protein contains Pfam domain PF04685: Protein of unknown function, DUF608" 3 1 4 8 At1g33880 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains Pfam PF04548: AIG1 family; 3 1 4 9 At1g33940 hypothetical protein 3 1 4 10 At1g34100 "choline kinase, putative similar to choline kinase (GmCK2p) GI:1438881 from [Glycine max]; contains Pfam profile PF01633: Choline/ethanolamine kinase; could not find a suitable start codon; this may be a pseudogene, a transposon insertion is found immediately upstream." 3 1 4 11 At1g34160 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 4 12 At1g34355 forkhead-associated domain-containing protein / FHA domain-containing protein 3 1 4 13 At1g34400 hypothetical protein 3 1 4 14 At1g44478 hypothetical protein 3 1 4 15 At1g44674 hypothetical protein 3 1 4 16 At1g44880 "Ulp1 protease family protein similar to At5g28170, At1g35110, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 1 4 17 At1g44960 expressed protein 3 1 4 18 At1g45180 "zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 4 19 At1g45231 "WW domain-containing protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon" 3 1 4 20 At1g46696 hypothetical protein slight similarity to maebl (GI:20087019)[Plasmodium falciparum]. 3 1 4 21 At1g47128 "cysteine proteinase (RD21A) / thiol protease identical to SP|P43297 Cysteine proteinase RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana}, thiol protease RD21A SP:P43297 from [Arabidopsis thaliana]" 3 1 4 22 At1g50060 "pathogenesis-related protein, putative similar to prb-1b [Nicotiana tabacum] GI:19970; contains Pfam profile PF00188: SCP-like extracellular protein" 3 1 4 23 At1g50150 hypothetical protein similar to hypothetical protein GB:AAD50048 GI:5734783 from [Arabidopsis thaliana] 3 1 4 24 At1g50360 "myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF00612 IQ calmodulin-binding motif" 3 1 4 25 At1g50420 "scarecrow-like transcription factor 3 (SCL3) identical to GB:AAD24404 GI:4580515 from [Arabidopsis thaliana] (Plant J. 18 (1), 111-119 (1999))" 3 1 5 1 At1g50610 "leucine-rich repeat transmembrane protein kinase, putative similar to receptor-like protein kinase GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]" 3 1 5 2 At1g50670 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 5 3 At1g50880 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 1 5 4 At1g50940 "electron transfer flavoprotein alpha subunit family protein contains Pfam profile: PF00766 electron transfer flavoprotein, alpha subunit" 3 1 5 5 At1g53600 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 5 6 At1g53650 "RNA-binding protein, putative similar to RNA-binding protein GB:AAA86641 GI:1174153 from [Arabidopsis thaliana]" 3 1 5 7 At1g53820 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 5 8 At1g53870 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 5 9 At1g54030 "GDSL-motif lipase, putative similar to myrosinase-associated proteins GI:1769968, GI:1769970, GI:1216391, GI:1216389 from [Brassica napus]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 1 5 10 At1g54080 "oligouridylate-binding protein, putative similar to oligouridylate binding protein GI:6996560 from [Nicotiana plumbaginifolia]" 3 1 5 11 At1g54215 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 1 5 12 At1g54260 "histone H1/H5 family protein contains Pfam domain, PF00538: linker histone H1 and H5 family" 3 1 5 13 At1g57780 heavy-metal-associated domain-containing protein low similarity to myosin-like antigen GI:159877 Onchocerca volvulus; contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 5 14 At1g57860 60S ribosomal protein L21 similar to 60S ribosomal protein L21 GI:3885884 from [Oryza sativa] 3 1 5 15 At1g58170 disease resistance-responsive protein-related / dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 1 5 16 At1g58225 expressed protein 3 1 5 17 At1g58350 expressed protein contains Pfam profile PF05057: Protein of unknown function (DUF676); supporting cDNA gi|6520166|dbj|AB028199.1| 3 1 5 18 At1g58410 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 5 19 At1g59124 "disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein; identical to cDNA RXF10 mRNA for PRM1 homolog, partial cds GI:6520172; contains Pfam profiles PF00931: NB-ARC domain and PF00560: Leucine Rich Repeat" 3 1 5 20 At1g59520 expressed protein (CW7) 3 1 5 21 At1g62390 "octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein contains Pfam profiles PF00564: PB1 domain, PF00515: TPR Domain" 3 1 5 22 At1g62450 Rho GDP-dissociation inhibitor family protein similar to SP|P52565 Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha) {Homo sapiens}; contains Pfam profile PF02115: RHO protein GDP dissociation inhibitor 3 1 5 23 At1g62640 "3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast / beta-ketoacyl-ACP synthase III / 3-ketoacyl-acyl carrier protein synthase III (KAS III) identical to SP|P49243 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) {Arabidopsis thaliana}" 3 1 5 24 At1g62710 "vacuolar processing enzyme beta / beta-VPE identical to SP|Q39044 Vacuolar processing enzyme, beta-isozyme precursor (EC 3.4.22.-) (Beta-VPE) {Arabidopsis thaliana}" 3 1 5 25 At1g62850 expressed protein similar to Immature colon carcinoma transcript 1 (Digestion substraction 1) (DS- 1) (Swiss-Prot:Q14197) [Homo sapiens] 3 1 6 1 At1g62900 "O-methyltransferase, putative similar to GB:AAB96879 from [Arabidopsis thaliana] (Biochim. Biophys. Acta 1353 (3), 199-202 (1997))" 3 1 6 2 At1g63060 expressed protein 3 1 6 3 At1g63110 cell division cycle protein-related contains 9 transmembrane domains; similar to PIG-U (GI:27372215) [Rattus norvegicus]; similar to Cell division cycle protein 91-like 1 (CDC91-like 1 protein) (PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens] 3 1 6 4 At1g65820 "microsomal glutathione s-transferase, putative similar to MGST3_HUMAN SP:O14880" 3 1 6 5 At1g65880 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501 3 1 6 6 At1g66060 "hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577); common family comprised of At4g09440, At1g66000, At1g66060" 3 1 6 7 At1g66120 "acyl-activating enzyme 11 (AAE11) similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230, acyl-activating enzyme 11 [Arabidopsis thaliana] GI:29893231" 3 1 6 8 At1g66250 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 3 1 6 9 At1g66320 F-box family protein contains F-box domain Pfam:PF00646 3 1 6 10 At1g66490 F-box family protein contains weak hit to Pfam PF00646: F-box domain;; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain 3 1 6 11 At1g66540 "cytochrome P450, putative Similar to cytochrome P450 91A1 (SP:Q9FG65)[Arabidopsis thaliana]; contains Pfam profile: PF00067: Cytochrome P450" 3 1 6 12 At1g69230 expressed protein 3 1 6 13 At1g69280 expressed protein 3 1 6 14 At1g69410 "eukaryotic translation initiation factor 5A, putative / eIF-5A, putative strong similarity to eukaryotic initiation factor 5A (2) (Nicotiana plumbaginifolia) GI:19702, SP|Q9AXQ6| Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Lycopersicon esculentum}" 3 1 6 15 At1g69470 hypothetical protein 3 1 6 16 At1g69580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 6 17 At1g69650 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 1 6 18 At1g69830 "alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative similar to SP|P17859 Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo}, alpha-amylase [Malus x domestica] GI:7532799; contains Pfam profile PF00128: Alpha amylase, catalytic domain" 3 1 6 19 At1g69890 expressed protein contains Pfam profile: PF04601 protein of unknown function (DUF569 3 1 6 20 At1g72690 expressed protein 3 1 6 21 At1g72750 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein contains Pfam PF02466: Mitochondrial import inner membrane translocase subunit Tim17 3 1 6 22 At1g72920 "disease resistance protein (TIR-NBS class), putative domain signature TIR-NBS exists, suggestive of a disease resistance protein." 3 1 6 23 At1g72980 LOB domain family protein / lateral organ boundaries domain family protein (LBD7) identical to SP|Q9SSM9 Putative LOB domain protein 7 {Arabidopsis thaliana}; similar to lateral organ boundaries (LOB) domain-containing proteins from Arabidopsis thaliana 3 1 6 24 At1g73165 Clavata3 / ESR-Related-1 (CLE1) Clavata3/ESR-Related-1 (CLE1) 3 1 6 25 At1g73210 expressed protein 3 1 7 1 At1g73360 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein protodermal factor2 (GI:14276060) [Arabidopsis thaliana]; similar to homeobox protein GI:1173621 from [ Phalaenopsis sp.] 3 1 7 2 At1g73410 myb family transcription factor (MYB54) identical to putative transcription factor (MYB54) GI:3941471 from [Arabidopsis thaliana] 3 1 7 3 AT5G57480 PC-1 A10 3 1 7 4 3XSSC PC-1 A22 3 1 7 5 AT1G29930 PC-1 E10 3 1 7 6 3XSSC PC-1 E22 3 1 7 7 AT3G44150 PC-1 I10 3 1 7 8 3XSSC PC-1 I22 3 1 7 9 AT4G00810 PC-1 M10 3 1 7 10 3XSSC PC-1 M22 3 1 7 11 At1g76250 expressed protein 3 1 7 12 At1g76310 "cyclin, putative similar to B-like cyclin GI:780267 from (Medicago sativa); contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 1 7 13 At1g76440 expressed protein 3 1 7 14 At1g76500 "DNA-binding family protein contains Pfam domain, PF02178: AT hook motif" 3 1 7 15 At1g76660 expressed protein 3 1 7 16 At1g76710 SET domain-containing protein (ASHH1) low similarity to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain; identical to cDNA ASH1-like protein 1 (ASHH1) partial cds GI:15488417 3 1 7 17 At1g76880 "trihelix DNA-binding protein, putative similar to DNA-binding protein DF1 [Pisum sativum] GI:13646986" 3 1 7 18 At1g76920 "F-box family protein (FBX3) contains similarity to stamina pistilloidia GI:4101570, the pea ortholog of Fim and UFO from [Pisum sativum]" 3 1 7 19 At1g79550 "phosphoglycerate kinase, putative similar to SP|P41758 Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) {Chlamydomonas reinhardtii}; contains Pfam profile PF00162: phosphoglycerate kinase" 3 1 7 20 At1g79600 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 3 1 7 21 At1g79740 "hAT dimerisation domain-containing protein contains Pfam profiles: PF04937 domain of unknown function (DUF659), PF05699 hAT family dimerisation domain" 3 1 7 22 At1g79790 haloacid dehalogenase-like hydrolase family protein contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 1 7 23 At1g79915 hypothetical protein 3 1 7 24 At1g79960 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 3 1 7 25 At1g80100 "phosphotransfer family protein similar to histidine-containing phosphotransfer protein [Catharanthus roseus] GI:13774348, ATHP3 [Arabidopsis thaliana] GI:4156245" 3 1 8 1 At1g80160 "lactoylglutathione lyase family protein / glyoxalase I family protein contains glyoxalase family protein domain, Pfam:PF00903" 3 1 8 2 At2g03000 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 8 3 At2g03050 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 1 8 4 At2g03250 "EXS family protein / ERD1/XPR1/SYG1 family protein similar to PHO1 protein [Arabidopsis thaliana] GI:20069032; contains Pfam profiles PF03105: SPX domain, PF03124: EXS family" 3 1 8 5 At2g03310 expressed protein 3 1 8 6 At2g03500 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 8 7 At2g03550 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873; contains an esterase/lipase/thioesterase active site serine domain (prosite: PS50187) 3 1 8 8 At2g03740 late embryogenesis abundant domain-containing protein / LEA domain-containing protein similar to cold-regulated gene cor15b [Arabidopsis thaliana] GI:456016; contains Pfam profile PF02987: Late embryogenesis abundant protein 3 1 8 9 At2g03810 18S pre-ribosomal assembly protein gar2-related contains weak similarity to Swiss-Prot:P41891 protein gar2 [Schizosaccharomyces pombe] 3 1 8 10 At2g07705 hypothetical protein 3 1 8 11 At2g07715 "ribosomal protein L2, putative similar to ribosomal protein L2 [Gossypium arboreum] GI:17933133; contains Pfam profile PF00181: Ribosomal Proteins L2, RNA binding domain" 3 1 8 12 At2g07740 zinc knuckle (CCHC-type) family protein similar to zinc finger protein GB:AAA75253; some members of this protein family have a weak CCHC zinc fingers that is mostly from retroviral gag proteins (nucleocapsid) 3 1 8 13 At2g08986 hypothetical protein 3 1 8 14 At2g10340 hypothetical protein 3 1 8 15 At2g10440 hypothetical protein 3 1 8 16 At2g10950 BSD domain-containing protein contains Pfam profile PF03909: BSD domain 3 1 8 17 At2g11005 glycine-rich protein 3 1 8 18 At2g16210 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain 3 1 8 19 At2g16280 "very-long-chain fatty acid condensing enzyme, putative similar to fatty acid condensing enzyme CUT1 GI:5001734 from [Arabidopsis thaliana]" 3 1 8 20 At2g16460 expressed protein 3 1 8 21 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana} GI:926929; contains Pfam profile PF00137: ATP synthase subunit C 3 1 8 22 At2g16720 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 8 23 At2g16780 WD-40 repeat protein (MSI2) contains 5 WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40 repeats (PF0400); 3 1 8 24 At2g16930 ribosomal protein L27 family protein contains Pfam profile PF01016: ribosomal protein L27 3 1 8 25 At2g16990 expressed protein 3 1 9 1 At2g19790 clathrin adaptor complex small chain family protein contains Pfam profile: PF01217 clathrin adaptor complex small chain 3 1 9 2 At2g19860 hexokinase 2 (HXK2) identical to hexokinase 2 [Arabidopsis thaliana] Swiss-Prot:P93834 3 1 9 3 At2g20020 expressed protein 3 1 9 4 At2g20080 expressed protein 3 1 9 5 At2g20250 hypothetical protein 3 1 9 6 At2g20310 expressed protein 3 1 9 7 At2g20490 nucleolar RNA-binding Nop10p family protein similar to Nop10p (GI:8096260) [Homo sapiens] 3 1 9 8 At2g20530 "prohibitin, putative similar to SP|P24142 Prohibitin (B-cell receptor associated protein 32) (BAP 32) {Rattus norvegicus}; contains Pfam profile PF01145: SPFH domain / Band 7 family" 3 1 9 9 At2g23150 "NRAMP metal ion transporter 3 (NRAMP3) identical to metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563" 3 1 9 10 At2g23210 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 1 9 11 At2g23380 curly leaf protein (CURLY LEAF) / polycomb-group protein identical to polycomb group [Arabidopsis thaliana] GI:1903019 (curly leaf); contains Pfam profile PF00856: SET domain 3 1 9 12 At2g23440 expressed protein 3 1 9 13 At2g23610 "esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 1 9 14 At2g23680 "stress-responsive protein, putative similar to cold acclimation WCOR413-like protein gamma form [Hordeum vulgare] gi|18449100|gb|AAL69988; similar to stress-regulated protein SAP1 [Xerophyta viscosa] gi|21360378|gb|AAM47505" 3 1 9 15 At2g23840 HNH endonuclease domain-containing protein contains Pfam profile PF01844: HNH endonuclease 3 1 9 16 At2g23940 expressed protein contains 2 transmembrane domains; contains Pfam profile PF05620: Protein of unknown function (DUF788) 3 1 9 17 At2g26780 expressed protein contains Pfam profile TBP (TATA-binding protein) -interacting protein 120 (TIP120); contains TIGRFAM profile TIGR01612: reticulocyte binding protein 3 1 9 18 At2g26820 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein similar to SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains Pfam profile PF04548: AIG1 family 3 1 9 19 At2g26975 "copper transporter, putative similar to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis thaliana}; contains Pfam profile PF04145: Ctr copper transporter family" 3 1 9 20 At2g27020 "20S proteasome alpha subunit G (PAG1) (PRC8) identical to proteasome subunit alpha type 3 SP:O23715, GI:12644056 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc8 GI:2511591" 3 1 9 21 At2g27150 aldehyde oxidase 3 (AAO3) identical to GP:3172044:gnl:PID:d1029570:AB010080 3 1 9 22 At2g27210 kelch repeat-containing serine/threonine phosphoesterase family protein similar to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Calcineurin-like phosphoesterase 3 1 9 23 At2g27350 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 9 24 At2g27390 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 1 9 25 At2g30120 expressed protein 3 1 10 1 At2g30200 expressed protein 3 1 10 2 At2g30350 endo/excinuclease amino terminal domain-containing protein contains Pfam domain PF01541: Endo/excinuclease amino terminal domain 3 1 10 3 At2g30395 expressed protein 3 1 10 4 At2g30550 lipase class 3 family protein similar to DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana] GI:16215706; contains Pfam profile PF01764: Lipase 3 1 10 5 At2g30600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] 3 1 10 6 At2g30730 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (serine/threonine protein kinase) [Lycopersicon esculentum] gi|3668069|gb|AAC61805; contains protein kinase domain, Pfam:PF00069" 3 1 10 7 At2g30790 "photosystem II oxygen-evolving complex 23, putative expression not detected; similar to SP|O49344 (GI:28800560 (OEC23) Arabidopsis; Non-identical EST and protein matches suggested a possible frameshift in exon 1 (a 4 base deletion between 73745 and 73746) and a different start for exon 2 (base 73645)." 3 1 10 8 At2g33400 expressed protein 3 1 10 9 At2g33450 "50S ribosomal protein L28, chloroplast (CL28) " 3 1 10 10 At2g33590 "cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase from Pinus taeda [GI:17978649], Eucalyptus gunnii [GI:2058311]" 3 1 10 11 At2g33655 F-box family protein contains F-box domain Pfam:PF00646 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 1 10 12 At2g33775 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 3 1 10 13 At2g33810 squamosa promoter-binding protein-like 3 (SPL3) identical to squamosa-promoter binding protein like 3 [Arabidopsis thaliana] GI:2462081; contains Pfam profile PF03110: SBP domain 3 1 10 14 At2g34030 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 10 15 At2g34070 expressed protein 3 1 10 16 At2g36680 expressed protein 3 1 10 17 At2g36710 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 10 18 At2g36885 expressed protein 3 1 10 19 At2g36910 "multidrug resistance P-glycoprotein (PGP1) identical to P-glycoprotein GI:3849833 from [Arabidopsis thaliana]; homologous to mammalian mdr gene,contains ATP-binding cassette; related to multi drug resistance proteins" 3 1 10 20 At2g37060 "CCAAT-box binding transcription factor, putative similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone" 3 1 10 21 At2g37100 protamine P1 family protein contains Pfam PF00260: Protamine P1 3 1 10 22 At2g37250 adenylate kinase family protein contains Pfam profile: PF00406 adenylate kinase 3 1 10 23 At2g37310 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 10 24 At2g39910 expressed protein 3 1 10 25 At2g39970 peroxisomal membrane protein (PMP36) identical to 36kDa-peroxisomal membrane protein (PMP36) GI:15146342 from [Arabidopsis thaliana] 3 1 11 1 At2g40100 chlorophyll A-B binding protein (LHCB4.3) identical to Lhcb4:3 protein [Arabidopsis thaliana] GI:4741956; contains Pfam profile: PF00504 chlorophyll A-B binding protein 3 1 11 2 At2g40120 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 11 3 At2g40270 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 1 11 4 At2g40320 expressed protein and genefinder 3 1 11 5 At2g40460 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family 3 1 11 6 At2g40510 40S ribosomal protein S26 (RPS26A) 3 1 11 7 At2g43070 "protease-associated (PA) domain-containing protein contains protease associated (PA) domain, Pfam:PF02225" 3 1 11 8 At2g43130 "Ras-related protein (ARA-4) / small GTP-binding protein, putative identical to SP:P28187 Ras-related protein ARA-4 {Arabidopsis thaliana}" 3 1 11 9 At2g43260 F-box family protein / S locus-related weak similarity to S locus F-box (SLF)-S2 protein [Antirrhinum hispanicum] GI:13161526; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 1 11 10 At2g43330 "sugar transporter family protein similar to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit) [Homo sapiens], SP|Q01440 Membrane transporter D1 {Leishmania donovani}; contains Pfam profile PF00083: major facilitator superfamily protein" 3 1 11 11 At2g43510 "trypsin inhibitor, putative similar to SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba}" 3 1 11 12 At2g43560 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplast precursor (Ppiase) (Rotamase) (SP:O22870)[Arabidopsis thaliana]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 1 11 13 At2g43720 expressed protein 3 1 11 14 At2g43770 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to U5 snRNP-specific 40 kDa protein (GI:3820594) [Homo sapiens] 3 1 11 15 At2g46410 myb-related protein CAPRICE (CPC) identical to myb-related protein CAPRICE (CPC) GI:2346965 from [Arabidopsis thaliana] 3 1 11 16 At2g46460 hypothetical protein 3 1 11 17 At2g46610 "arginine/serine-rich splicing factor, putative similar to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana}" 3 1 11 18 At2g46660 "cytochrome P450, putative similar to cytochrome p450 (CYP78A9)(GI:17065344) {Arabidopsis thaliana}" 3 1 11 19 At2g46810 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 1 11 20 At2g46870 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain" 3 1 11 21 At2g47010 expressed protein 3 1 11 22 At2g47060 "serine/threonine protein kinase, putative similar to Pto kinase interactor 1 (Pti1)[Lycopersicon esculentum] gi|3668069|gb|AAC61805" 3 1 11 23 At3g02380 zinc finger protein CONSTANS-LIKE 2 (COL2) identical to putative flowering-time gene CONSTANS (COL2) GB:AAB67879 GI:1507699 SP:Q96502 (Arabidopsis thaliana) 3 1 11 24 At3g02440 expressed protein 3 1 11 25 At3g02560 40S ribosomal protein S7 (RPS7B) similar to ribosomal protein S7 GB:AAD26256 from [Secale cereale] 3 1 12 1 At3g02620 "acyl-[acyl-carrier-protein] desaturase, putative / stearoyl-ACP desaturase, putative similar to Acyl-[acyl-carrier protein] desaturase from Spinacia oleracea SP|P28645, Olea europaea SP|Q43593; contains Pfam profile PF03405 Fatty acid desaturase" 3 1 12 2 At3g02800 "tyrosine specific protein phosphatase family protein contains tyrosine specific protein phosphatases active site, PROSITE:PS00383" 3 1 12 3 At3g02860 expressed protein 3 1 12 4 At3g03010 expressed protein 3 1 12 5 At3g03070 "NADH-ubiquinone oxidoreductase-related contains weak similarity to NADH-ubiquinone oxidoreductase 13 kDa-A subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-13KD-A) (CI-13KD-A) (Swiss-Prot:P23934) [Bos taurus]" 3 1 12 6 At3g05675 expressed protein 3 1 12 7 At3g05710 "syntaxin, putative similar to syntaxin of plants 42 [Arabidopsis thaliana] GI:5059352" 3 1 12 8 At3g05860 MADS-box protein (AGL45) similar to MADS-box protein; PMID: 12837945; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 3 1 12 9 At3g05920 heavy-metal-associated domain-containing protein contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 12 10 At3g06040 "ribosomal protein L12 family protein contains similarity to 50S ribosomal protein L12-C, chloroplast precursor GB:P36212 from [Arabidopsis thaliana]" 3 1 12 11 At3g06080 expressed protein identical to unknown protein GB:AAF30301 from [Arabidopsis thaliana] 3 1 12 12 At3g06230 "mitogen-activated protein kinase kinase (MAPKK), putative (MKK8) mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 3 1 12 13 At3g06290 SAC3/GANP family protein contains Pfam profile: PF03399 SAC3/GANP family 3 1 12 14 At3g09220 "laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], laccase GB:CAA74105 [Populus balsamifera subsp. trichocarpa]; contains Pfam profile: Multicopper oxidases" 3 1 12 15 At3g09280 expressed protein ; expression supported by MPSS 3 1 12 16 At3g09450 hypothetical protein 3 1 12 17 At3g09510 hypothetical protein 3 1 12 18 At3g09700 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain; similar to a region of DNAJ domain-containing protein MCJ GB:AAD38506 3 1 12 19 At3g09750 hypothetical protein 3 1 12 20 At3g09890 "ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023" 3 1 12 21 At3g09930 GDSL-motif lipase/hydrolase family protein similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile: PF00657 lipase acylhydrolase with GDSL-like motif 3 1 12 22 At3g12320 expressed protein 3 1 12 23 At3g12370 ribosomal protein L10 family protein similar to 50S ribosomal protein L10 [Oryza sativa] GB:AAC64971 GI:3777602 [Oryza sativa] 3 1 12 24 At3g12545 "lipid transfer protein-related low similarity to Lipid transfer protein [Brassica rapa] GI:3062791; contains Pfam profile PF00152: tRNA synthetases class II (D, K and N)" 3 1 12 25 At3g12600 MutT/nudix family protein contains Pfam profile PF00293: NUDIX domain 3 1 13 1 At3g12760 "expressed protein similar to RP42 protein [Homo sapiens] GI:9896486; contains Pfam profile PF00627: UBA/TS-N domain, PF03556: Domain of unknown function (DUF298)" 3 1 13 2 At3g12820 myb family transcription factor (MYB10) similar to myb factor GI:1945279 from [Oryza sativa] 3 1 13 3 At3g12990 "3' exoribonuclease family protein similar to SP|Q06265 Exosome complex exonuclease RRP45 [Homo sapiens]; contains Pfam profiles PF01138: 3' exoribonuclease family, domain 1, PF03725: 3' exoribonuclease family, domain 2" 3 1 13 4 At3g13040 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 13 5 At3g15353 "metallothionein protein, putative " 3 1 13 6 At3g15390 expressed protein low similarity to PRLI-interacting factor N [Arabidopsis thaliana] GI:11139276 3 1 13 7 At3g15540 auxin-responsive protein / indoleacetic acid-induced protein 19 (IAA19) identical to SP|O24409 Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) {Arabidopsis thaliana} 3 1 13 8 At3g15600 "hypothetical protein low similarity to KED [Nicotiana tabacum] GI:8096269; contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 1 13 9 At3g15750 expressed protein 3 1 13 10 At3g15810 expressed protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 13 11 At3g15970 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein similar to Ran binding protein [Homo sapiens] GI:624232; contains Pfam profile PF00638: RanBP1 domain 3 1 13 12 At3g16010 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 13 13 At3g18680 aspartate/glutamate/uridylate kinase family protein similar to UMP-kinase GB:CAB38122 gi:4468612 from [Lactococcus lactis] ; contains Pfam profile PF00696: Amino acid kinase family 3 1 13 14 At3g18730 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain 3 1 13 15 At3g18860 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] 3 1 13 16 At3g18930 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 3 1 13 17 At3g19080 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 3 1 13 18 At3g19140 hypothetical protein 3 1 13 19 At3g19300 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 13 20 At3g19350 "polyadenylate-binding protein-related / PABP-related similar to poly(A)-binding protein [Cucumis sativus] GI:7528270; contains Pfam profile PF00658: Poly-adenylate binding protein, unique domain" 3 1 13 21 At3g22050 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function; weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris] 3 1 13 22 At3g22104 "phototropic-responsive NPH3 protein-related contains BTB/POZ domain, INTERPRO:IPR000210" 3 1 13 23 At3g22260 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease 3 1 13 24 At3g22330 "DEAD box RNA helicase, putative similar to RNA helicases GI:3775995, GI:3775987 from [Arabidopsis thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 1 13 25 At3g22450 expressed protein ; expression supported by MPSS 3 1 14 1 At3g22490 "late embryogenesis abundant protein, putative / LEA protein, putative similar to LEA protein in group 5 (AtECP31) [Arabidopsis thaliana] GI:1526422; contains Pfam profile PF04927: Seed maturation protein" 3 1 14 2 At3g22680 expressed protein 3 1 14 3 At3g22740 homocysteine S-methyltransferase 3 (HMT-3) identical to homocysteine S-methyltransferase HMT-3 [Arabidopsis thaliana] GI:9966515; similar to homocysteine S-methyltransferase AtHMT-2 (GI:6685163) [Arabidopsis thaliana]; similar to selenocysteine methyltransferase GB:P56707 from [Astragalus bisulcatus] 3 1 14 4 At3g25655 expressed protein 3 1 14 5 At3g25710 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 1 14 6 At3g25855 expressed protein 3 1 14 7 At3g25900 homocysteine S-methyltransferase 1 (HMT-1) identical to GB:AAF23821 from [Arabidopsis thaliana] 3 1 14 8 At3g26050 expressed protein 3 1 14 9 At3g26100 regulator of chromosome condensation (RCC1) family protein weak similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 3 1 14 10 At3g26230 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 3 1 14 11 At3g26280 "cytochrome P450 family protein identical to cytochrome P450 monooxygenase (CYP71B4) GB:D78603 [Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52 (1998))" 3 1 14 12 At3g29010 expressed protein ; expression supported by MPSS 3 1 14 13 At3g29040 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069 3 1 14 14 At3g29185 expressed protein 3 1 14 15 At3g29230 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 1 14 16 At3g29350 two-component phosphorelay mediator 1 (HP1) identical to ATHP1 [Arabidopsis thaliana] GI:4156241 3 1 14 17 At3g29390 hydroxyproline-rich glycoprotein family protein sequencing discrepancy between cDNA and genomic sequence prevents representation of entire coding sequence 3 1 14 18 At3g29640 hypothetical protein contains similarity to hypothetical proteins 3 1 14 19 At3g29710 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 1 14 20 At3g43760 hypothetical protein 3 1 14 21 At3g43810 "calmodulin-7 (CAM7) almost identical to calmodulin GI:16227 from [Arabidopsis thaliana], SP|P59220 Calmodulin-7 {Arabidopsis thaliana}" 3 1 14 22 At3g44020 thylakoid lumenal P17.1 protein contains Pfam PF00684 : DnaJ central domain (4 repeats); SP:Q9LXV9; PMID:11719511; supported by EST AI997589. 3 1 14 23 At3g44090 F-box family protein contains F-box domain Pfam:PF00646 3 1 14 24 At3g44235 hypothetical protein 3 1 14 25 At3g44300 nitrilase 2 (NIT2) identical to SP|P32962 Nitrilase 2 (EC 3.5.5.1) {Arabidopsis thaliana} 3 1 15 1 At3g44510 expressed protein 3 1 15 2 At3g44570 hypothetical protein 3 1 15 3 At3g47440 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 1 15 4 At3g47480 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 15 5 At3g47620 "TCP family transcription factor, putative auxin-induced basic helix-loop-helix transcription factor - Gossypium hirsutum, EMBL:AF165924" 3 1 15 6 At3g47675 expressed protein 3 1 15 7 At3g47833 expressed protein 3 1 15 8 At3g47890 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 1 15 9 At3g48050 bromo-adjacent homology (BAH) domain-containing protein contains Pfam profile PF01426: BAH domain 3 1 15 10 At3g48110 "aminoacyl-t-RNA synthetase, putative similar to aminoacyl-t-RNA synthetase GI:2654226 from [Arabidopsis thaliana]; contains Pfam profiles: PF02092 glycyl-tRNA synthetase beta subunit,PF02091 glycyl-tRNA synthetase alpha subunit" 3 1 15 11 At3g51000 "epoxide hydrolase, putative similar to epoxide hydrolase [Glycine max] GI:2764806; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 1 15 12 At3g51050 FG-GAP repeat-containing protein 3 1 15 13 At3g51220 expressed protein contains Pfam doamin PF05701: Plant protein of unknown function (DUF827) 3 1 15 14 At3g51280 "male sterility MS5, putative similar to male sterility MS5 [Arabidopsis thaliana] GI:3859112; contains Pfam profile PF00515 TPR Domain" 3 1 15 15 At3g51440 "strictosidine synthase family protein similar to hemomucin [Drosophila melanogaster][GI:1280434], strictosidine synthase [Rauvolfia serpentina][SP|P15324]; contains strictosidine synthase domain PF03088" 3 1 15 16 At3g51500 "expressed protein predicted protein, Oryza sativa, EMBL:AP000367" 3 1 15 17 At3g51660 macrophage migration inhibitory factor family protein / MIF family protein contains Pfam profile: PF01187 Macrophage migration inhibitory factor family(MIF) 3 1 15 18 At3g51720 expressed protein contains Pfam PF05701: Plant protein of unknown function (DUF827) 3 1 15 19 At3g54190 "expressed protein GTP-binding regulatory protein beta chain, Dictyostelium discoideum, PIR:A47370" 3 1 15 20 At3g54250 "mevalonate diphosphate decarboxylase, putative similar to mevalonate diphosphate decarboxylase [Arabidopsis thaliana] gi|2288887|emb|CAA74700" 3 1 15 21 At3g54420 class IV chitinase (CHIV) almost identical to class IV chitinase from GI:2597826 [Arabidopsis thaliana] 3 1 15 22 At3g54480 SKP1 interacting partner 5 (SKIP5) identical to GP:14348816 SKP1-interacting partner 5 {Arabidopsis thaliana} 3 1 15 23 At3g54630 expressed protein weak similarity to retinoblastoma-associated protein HEC [Homo sapiens] GI:2501873 3 1 15 24 At3g54690 "sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein similar to SP|Q47334 Polysialic acid capsule expression protein kpsF {Escherichia coli}; contains Pfam profiles PF01380: sugar isomerase (SIS) domain, PF00571: CBS domain" 3 1 15 25 At3g54860 "vacuolar protein sorting protein, putative similar to Swiss-Prot:Q63615 vacuolar protein sorting 33A (r-vps33a) [Rattus norvegicus]; contains Pfam domain, PF00995: Sec1 family" 3 1 16 1 At3g54890 chlorophyll A-B binding protein / LHCI type I (CAB) identical to chlorophyll A/B-binding protein [Arabidopsis thaliana] GI:16207; contains Pfam profile: PF00504 chlorophyll A-B binding protein 3 1 16 2 At3g57690 "arabinogalactan-protein, putative (AGP23) similar to arabinogalactan protein [Arabidopsis thaliana] gi|10880503|gb|AAG24281" 3 1 16 3 At3g57750 "protein kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] gi|3549626|emb|CAA08794; contains protein kinase domain, Pfam:PF00069" 3 1 16 4 At3g57900 "hypothetical protein hypothetical protein T24P15.12 - Arabidopsis thaliana, PIR:T00930" 3 1 16 5 At3g57960 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain 3 1 16 6 At3g58150 expressed protein similar to SP|Q9H6K4 Optic atrophy 3 protein {Homo sapiens} 3 1 16 7 At3g58210 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 1 16 8 At3g58390 "eukaryotic release factor 1 family protein / eRF1 family protein contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 3 1 16 9 At3g58450 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 3 1 16 10 At3g61170 pentatricopeptide (PPR) repeat-containing protein strong similarity to PCMP-H2 [Arabidopsis thaliana] GI:5050911; contains Pfam profile PF01535: PPR repeat 3 1 16 11 At3g61230 LIM domain-containing protein similar to SP|P29675 Pollen specific protein SF3 {Helianthus annuus}; contains Pfam profile PF00412: LIM domain 3 1 16 12 At3g61390 U-box domain-containing protein several hypothetical proteins - Arabidopsis thaliana 3 1 16 13 At3g61430 plasma membrane intrinsic protein 1A (PIP1A) / aquaporin PIP1.1 (PIP1.1) (AQ1) identical to plasma membrane intrinsic protein 1A SP:P43285 from [Arabidopsis thaliana] 3 1 16 14 At3g61600 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] 3 1 16 15 At3g61650 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} 3 1 16 16 At3g61810 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase precursor GI:4097948 from [Oryza sativa]; contains Pfam profile PF00332: Glycosyl hydrolases family 17" 3 1 16 17 At3g61860 arginine/serine-rich splicing factor RSP31 (RSP31) identical to SP|P92964 Arginine/serine-rich splicing factor RSP31 {Arabidopsis thaliana} 3 1 16 18 At4g00810 60S acidic ribosomal protein P1 (RPP1B) similar to acidic ribosomal protein p1 3 1 16 19 At4g00850 SSXT family protein low similarity to synovial sarcoma associated SS18-delta [Mus musculus] GI:17978535; contains Pfam profile PF05030: SSXT protein (N-terminal region) 3 1 16 20 At4g01000 ubiquitin family protein low similarity to SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam profile PF00240: Ubiquitin family 3 1 16 21 At4g01040 glycosyl hydrolase family 18 protein contains Pfam profile PF00704: Glycosyl hydrolases family 18 3 1 16 22 At4g01210 glycosyltransferase family protein 1 contains Pfam profile: PF00534 Glycosyl transferases group 1 3 1 16 23 At4g01250 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 3 1 16 24 At4g01420 "calcineurin B-like protein 5 (CBL5) identical to calcineurin B-like protein 5 (GI:9965366) [Arabidopsis thaliana]; similar to N. crassa calcineurin calcium-regulated protein phosphatase, GenBank accession number P87072" 3 1 16 25 At4g01450 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] 3 1 17 1 At4g04220 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon pimpinellifolium] gi|3894389|gb|AAC78594" 3 1 17 2 At4g04350 "leucyl-tRNA synthetase, putative / leucine--tRNA ligase, putative similar to SP|P36430 Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) {Bacillus subtilis}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V)" 3 1 17 3 At4g04525 hypothetical protein 3 1 17 4 At4g04610 5'-adenylylsulfate reductase (APR1) / PAPS reductase homolog (PRH19) identical to 5'-adenylylsulfate reductase [Arabidopsis thaliana] GI:2738756; identical to cDNA PAPS reductase homolog (PRH19) GI:1710111 3 1 17 5 At4g04760 "sugar transporter family protein similar to sugar-porter family proteins 1 and 2 [Arabidopsis thaliana] GI:14585699, GI:14585701; contains Pfam profile PF00083: major facilitator superfamily protein" 3 1 17 6 At4g04820 hypothetical protein 3 1 17 7 At4g04970 "callose synthase, putative / 1,3-beta-glucan synthase, putative similar to callose synthase 1 catalytic subunit GI:13649388 from [Arabidopsis thaliana]" 3 1 17 8 At4g05000 vacuolar protein sorting-associated protein 28 family protein / VPS28 family protein contains similarity to Swiss-Prot:Q02767 vacuolar protein sorting-associated protein VPS28 [Saccharomyces cerevisiae] 3 1 17 9 At4g09730 "DEAD/DEAH box helicase, putative RNA helicase -Mus musculus,PIR2:I84741" 3 1 17 10 At4g09775 hypothetical protein 3 1 17 11 At4g09960 MADS-box protein (AGL11) 3 1 17 12 At4g09970 expressed protein 3 1 17 13 At4g10130 "DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q9QYI7 DnaJ homolog subfamily B member 8 Mus musculus, SP|P50025 Chaperone protein dnaJ Legionella pneumophila; contains Pfam profile PF00226 DnaJ domain" 3 1 17 14 At4g10170 "synaptobrevin-related family protein similar to Vesicle-associated membrane protein 722 (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis thaliana}; vesicle-associated membrane protein 7B, Arabidopsis thaliana, AF025333" 3 1 17 15 At4g10340 "chlorophyll A-B binding protein CP26, chloroplast / light-harvesting complex II protein 5 / LHCIIc (LHCB5) identical to SP|Q9XF89 Chlorophyll A/B-binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) {Arabidopsis thaliana}; contains Pfam profile: PF00504 chlorophyll A-B binding protein; chlorophyll a/b-binding protein CP26 in PS II, Brassica juncea, gb:X95727" 3 1 17 16 At4g10400 F-box family protein contains F-box domain Pfam:PF00646 3 1 17 17 At4g13210 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 3 1 17 18 At4g13266 hypothetical protein 3 1 17 19 At4g13370 expressed protein 3 1 17 20 At4g13430 aconitase family protein / aconitate hydratase family protein contains Pfam profile PF00330: Aconitase family (aconitate hydratase 3 1 17 21 At4g13590 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 3 1 17 22 At4g13640 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 1 17 23 At4g13800 "permease-related contains 9 predicted transmembrane domains; contains Pfam PF05653: Protein of unknown function (DUF803); identified as COG0697, Permeases of the drug/metabolite transporter (DMT) superfamily" 3 1 17 24 At4g13840 transferase family protein low similarity to acetyl-CoA:benzylalcohol acetyltranferase [Clarkia concinna] GI:6166328; contains Pfam profile PF02458: Transferase family 3 1 17 25 At4g16190 "cysteine proteinase, putative contains similarity to papain-like cysteine proteinase isoform I GI:7381219 from [Ipomoea batatas]" 3 1 18 1 At4g16230 GDSL-motif lipase/hydrolase family protein similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase 3 1 18 2 At4g16400 expressed protein 3 1 18 3 At4g16444 expressed protein 3 1 18 4 At4g16566 "histidine triad family protein / HIT family protein contains Pfam domain, PF01230: HIT family (histidine triad protein family)" 3 1 18 5 At4g16620 integral membrane family protein / nodulin MtN21-related low similarity to MtN21 [Medicago truncatula] GI:2598575 3 1 18 6 At4g16745 exostosin family protein contains Pfam PF03016: Exostosin family 3 1 18 7 At4g16770 "oxidoreductase, 2OG-Fe(II) oxygenase family protein low similarity to flavonol synthase from Petunia hybrida [SP|Q07512], Citrus unshiu [GI:4126403]; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily; non-consensus GG acceptor splice site at exon 8" 3 1 18 8 At4g19320 "hypothetical protein simlar to At5g28170, At1g35110, At1g44880, At3g42530, At5g36020, At4g03970, At3g43010, At2g10350" 3 1 18 9 At4g19380 "alcohol oxidase-related similar to long chain fatty alcohol oxidase from Candida cloacae [GI:6983581], Candida tropicalis [GI:6983594]" 3 1 18 10 At4g19540 expressed protein 3 1 18 11 At4g19600 "cyclin family protein similar to cyclin T2a [Homo sapiens] GI:2981198; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 1 18 12 At4g19740 "glycosyl hydrolase family 18 protein similar to chitinase, class V GI:899342 from [Nicotiana tabacum]" 3 1 18 13 At4g19820 glycosyl hydrolase family 18 protein similar to chitinase/lysozyme GI:467689 from [Nicotiana tabacum] 3 1 18 14 At4g19980 expressed protein ; expression supported by MPSS 3 1 18 15 At4g20020 expressed protein 3 1 18 16 At4g22820 "zinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger" 3 1 18 17 At4g22880 "leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative similar to SP|P51091 [Malus domestica]; contains PF03171 2OG-Fe(II) oxygenase superfamily" 3 1 18 18 At4g23030 MATE efflux protein-related contains Pfam profile PF01554: Uncharacterized membrane protein family 3 1 18 19 At4g23090 hypothetical protein 3 1 18 20 At4g23240 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 1 18 21 At4g23290 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain 3 1 18 22 At4g23460 "beta-adaptin, putative strong similarity to SP|Q10567 Adapter-related protein complex 1 beta 1 subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin [Drosophila melanogaster] GI:434902; contains Pfam profile: PF01602 Adaptin N terminal region" 3 1 18 23 At4g23496 expressed protein 3 1 18 24 At4g26070 "mitogen-activated protein kinase kinase (MAPKK) (MKK1) (MEK1) identical to MEK1 [Arabidopsis thaliana] gi|2196704|gb|AAB97145; mitogen-activated protein kinase kinase (MAPKK) family, PMID:12119167" 3 1 18 25 At4g26110 "nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP)" 3 1 19 1 At4g26260 expressed protein similar to myo-inositol oxygenase [Sus scrofa] gi|17432544|gb|AAL39076 3 1 19 2 At4g26320 arabinogalactan-protein (AGP13) identical to gi|10880503|gb|AAG24281 3 1 19 3 At4g26470 calcium-binding EF hand family protein low similarity to SP|P06787 Calmodulin {Saccharomyces cerevisiae}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 1 19 4 At4g26510 uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) nearly identical to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana} 3 1 19 5 At4g26650 "RNA recognition motif (RRM)-containing protein contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 3 1 19 6 At4g26710 ATP synthase subunit H family protein contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) [Homo sapiens] 3 1 19 7 At4g29285 expressed protein 3 1 19 8 At4g29350 profilin 2 (PRO2) (PFN2) (PRF2) identical to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis thaliana]; identical to cDNA profilin (PRF2) GI:9965570 3 1 19 9 At4g29510 "protein arginine N-methyltransferase, putative similar to protein arginine N-methyltransferase 1-variant 2 [Homo sapiens] GI:7453575" 3 1 19 10 At4g29570 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase homolog DesA [Arabidopsis thaliana] GI:4836443, cytidine deaminase 8 (CDA8) [Arabidopsis thaliana] GI:5080714; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 3 1 19 11 At4g29730 WD-40 repeat family protein contains 5 WD-40 repeats (PF0400); similar to WD-40 repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana] 3 1 19 12 At4g29770 expressed protein 3 1 19 13 At4g29920 heat shock protein-related contains similarity to heat shock protein 101 [Triticum aestivum] gi|6013196|gb|AAF01280 3 1 19 14 At4g29980 expressed protein 3 1 19 15 At4g32480 expressed protein contains Pfam profile PF04720: Protein of unknown function (DUF506) 3 1 19 16 At4g32540 flavin-containing monooxygenase / FMO (YUCCA) identical to gi:16555352 3 1 19 17 At4g32670 expressed protein ; expression supported by MPSS 3 1 19 18 At4g32750 expressed protein 3 1 19 19 At4g32880 homeobox-leucine zipper transcription factor (HB-8) identical to HD-zip transcription factor (athb-8) (GI:7270235) [Arabidopsis thaliana] 3 1 19 20 At4g32915 expressed protein 3 1 19 21 At4g33070 "pyruvate decarboxylase, putative strong similarity to SP|P51846 Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) {Nicotiana tabacum}; contains InterPro entry IPR000399: Pyruvate decarboxylase" 3 1 19 22 At4g33130 expressed protein weak similarity to Max-interacting transcriptional repressor [Mus musculus] GI:1184157 3 1 19 23 AT5G57480 PC-1 A10 3 1 19 24 3XSSC PC-1 A22 3 1 19 25 AT1G29930 PC-1 E10 3 1 20 1 3XSSC PC-1 E22 3 1 20 2 AT3G44150 PC-1 I10 3 1 20 3 3XSSC PC-1 I22 3 1 20 4 AT4G00810 PC-1 M10 3 1 20 5 3XSSC PC-1 M22 3 1 20 6 At4g35730 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 1 20 7 At4g35785 "transformer serine/arginine-rich ribonucleoprotein, putative similar to transformer-SR ribonucleoprotein [Nicotiana tabacum] gi|1781299|emb|CAA70700" 3 1 20 8 At4g35920 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614; isoform contains AT-acceptor splice site at intron 8" 3 1 20 9 At4g35980 expressed protein 3 1 20 10 At4g36100 "expressed protein contains Pfam domain, PF04859: Plant protein of unknown function (DUF641)" 3 1 20 11 At4g36150 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 20 12 At4g36360 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum]" 3 1 20 13 At4g36400 "FAD linked oxidase family protein low similarity to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 3 1 20 14 At4g39040 expressed protein contains PF01985: Uncharacterised protein family 3 1 20 15 At4g39100 "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF01426: BAH domain" 3 1 20 16 At4g39260 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform contains a non-consensus CG acceptor splice site at intron 2 3 1 20 17 At4g39270 "leucine-rich repeat transmembrane protein kinase, putative receptor protein kinase erecta, Arabidopsis thaliana" 3 1 20 18 At4g39400 brassinosteroid insensitive 1 (BRI1) identical to GI:2392895 3 1 20 19 At4g39460 mitochondrial substrate carrier family protein 3 1 20 20 At4g39620 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 20 21 At4g39675 expressed protein 3 1 20 22 At5g03180 "zinc finger (C3HC4-type RING finger) family protein various predicted proteins, Arabidopsis thaliana ; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 3 1 20 23 At5g03240 polyubiquitin (UBQ3) identical to GI:928809 3 1 20 24 At5g03415 "DPB-1 transcription factor, putative (DPB) similar to Swiss-Prot:Q14186 transcription factor DP-1 [Homo sapiens]; contains Pfam profile PF02319: Transcription factor E2F/dimerisation partner (TDP)" 3 1 20 25 At5g03440 expressed protein 3 1 21 1 At5g03590 GDSL-motif lipase/hydrolase protein-related 3 1 21 2 At5g03650 "1,4-alpha-glucan branching enzyme / starch branching enzyme class II (SBE2-2) identical to starch branching enzyme class II [Arabidopsis thaliana] GI:726490" 3 1 21 3 At5g03830 "expressed protein hypothetical protein F4I1.32, Arabidopsis thaliana, PIR:T02406" 3 1 21 4 At5g03890 hypothetical protein 3 1 21 5 At5g06480 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 3 1 21 6 At5g06530 ABC transporter family protein 3 1 21 7 At5g06700 expressed protein strong similarity to unknown protein (emb|CAB82953.1) 3 1 21 8 At5g06750 protein phosphatase 2C family protein / PP2C family protein similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; 3 1 21 9 At5g06920 hypothetical protein 3 1 21 10 At5g06980 expressed protein 3 1 21 11 At5g07120 phox (PX) domain-containing protein similar to SP|O60749 Sorting nexin 2 {Homo sapiens}; contains Pfam profile PF00787: PX domain 3 1 21 12 At5g07180 leucine-rich repeat family protein / protein kinase family protein contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain 3 1 21 13 At5g10280 myb family transcription factor (MYB92) contains PFAM profile myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB92) GI:3941523 3 1 21 14 At5g10340 F-box protein-related / SLF-related contains weak hit to Pfam Pfam PF00646: F-box domain and to TIGRFAM TIGR01640 : F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 3 1 21 15 At5g10500 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 3 1 21 16 At5g10560 "glycosyl hydrolase family 3 protein beta-xylosidase, Aspergllus nidulans, EMBL:ANXLND" 3 1 21 17 At5g10710 expressed protein 3 1 21 18 At5g10745 expressed protein 3 1 21 19 At5g10920 "argininosuccinate lyase, putative / arginosuccinase, putative similar to argininosuccinate lyase [Nostoc punctiforme] GI:7672743; contains Pfam profile PF00206: Lyase" 3 1 21 20 At5g10980 "histone H3 identical to HISTONE H3.2, MINOR, Medicago sativa, SWISSPROT:P11105, histone H3 variant H3.3 Lycopersicon esculentum GI:1435157; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 3 1 21 21 At5g14100 "ABC transporter family protein contains similarity to ABC transporter, ATP-binding protein" 3 1 21 22 At5g14150 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 3 1 21 23 At5g14330 expressed protein 3 1 21 24 At5g14390 expressed protein 3 1 21 25 At5g14550 "expressed protein contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266" 3 1 22 1 At5g14590 "isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative strong similarity to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] GI:3021512; contains Pfam domain PF00180: dehydrogenase, isocitrate/isopropylmalate family" 3 1 22 2 At5g14770 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 1 22 3 At5g14850 "mannosyltransferase, putative similar to PIGB from Homo sapiens [gi:1552169], Mus musculus [gi:7634741]" 3 1 22 4 At5g17530 phosphoglucosamine mutase family protein low similarity to phosphoglucomutase/phosphomannomutase [Sphingomonas paucimobilis] GI:6103619; contains InterPro accession IPR006352: Phosphoglucosamine mutase 3 1 22 5 At5g17570 tatD-related deoxyribonuclease family protein contains Pfam profile PF01026: TatD related DNase 3 1 22 6 At5g17730 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 3 1 22 7 At5g17770 NADH-cytochrome b5 reductase identical to NADH-cytochrome b5 reductase [Arabidopsis thaliana] GI:4240116 3 1 22 8 At5g17960 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 1 22 9 At5g18020 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 3 1 22 10 At5g18170 glutamate dehydrogenase 1 (GDH1) identical to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis thaliana] SWISS-PROT:Q43314 3 1 22 11 At5g18230 transcription regulator NOT2/NOT3/NOT5 family protein contains Pfam domain PF04153: NOT2 / NOT3 / NOT5 family 3 1 22 12 At5g20790 "expressed protein predicted protein, Arabidopsis thaliana" 3 1 22 13 At5g20860 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 22 14 At5g21010 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 3 1 22 15 At5g21070 expressed protein 3 1 22 16 At5g21900 expressed protein 3 1 22 17 At5g21960 "AP2 domain-containing transcription factor, putative similar to TINY (GI:1246403) [Arabidopsis thaliana]" 3 1 22 18 At5g22100 "RNA cyclase family protein contains Pfam profiles: PF01137 RNA 3'-terminal phosphate cyclase, PF05189 RNA 3-prime-terminal phosphate cyclase (RTC)" 3 1 22 19 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein contains Pfam profile PF00070 Pyridine nucleotide-disulphide oxidoreductase domain 3 1 22 20 At5g24780 vegetative storage protein 1 (VSP1) identical to SP|O49195 Vegetative storage protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase 3 1 22 21 At5g24840 expressed protein contains Pfam profile PF02390: Putative methyltransferase 3 1 22 22 At5g25010 expressed protein ; expression supported by MPSS 3 1 22 23 At5g25070 expressed protein 3 1 22 24 At5g25250 expressed protein 3 1 22 25 At5g25290 F-box family protein contains F-box domain Pfam:PF00646 3 1 23 1 At5g25430 anion exchange protein family contains similarity to SWISS-PROT:P02730 anion transport protein (Anion exchange protein 1) [Human]{Homo sapiens} 3 1 23 2 At5g25470 expressed protein 3 1 23 3 At5g28463 hypothetical protein 3 1 23 4 At5g28500 "expressed protein predicted proteins, Arabidopsis thaliana and Synechocystis sp." 3 1 23 5 At5g28660 hypothetical protein 3 1 23 6 At5g28750 "thylakoid assembly protein, putative similar to thylakoid assembly 4 (tha4) protein [Pisum sativum] GI:4929305; contains Pfam profile PF02416: mttA/Hcf106 family" 3 1 23 7 At5g28900 calcium-binding EF hand family protein contains Pfam profile: PF00036 EF hand 3 1 23 8 At5g28960 hypothetical protein 3 1 23 9 At5g30495 expressed protein 3 1 23 10 At5g30490 expressed protein 3 1 23 11 At5g37478 Expressed protein 3 1 23 12 At5g37510 "NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644]" 3 1 23 13 At5g37690 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]" 3 1 23 14 At5g37760 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 3 1 23 15 At5g37940 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428], Arabidopsis thaliana" 3 1 23 16 At5g38000 "NADP-dependent oxidoreductase, putative similar to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana" 3 1 23 17 At5g38170 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 3 1 23 18 At5g38220 expressed protein 3 1 23 19 At5g41080 glycerophosphoryl diester phosphodiesterase family protein weak similarity to SP|P37965 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) {Bacillus subtilis}; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family 3 1 23 20 At5g41110 expressed protein ; expression supported by MPSS 3 1 23 21 At5g41300 receptor-like protein kinase-related contains weak similarity to receptor-like protein kinase homolog RK20-1 (GI:4530126) [Phaseolus vulgaris]; contains Pfam profile: PF01657 Domain of unknown function DUF26 3 1 23 22 At5g41350 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 1 23 23 At5g41530 hypothetical protein similar to unknown protein (pir |T01544) 3 1 23 24 At5g41590 hypothetical protein contains Pfam profile PF04525: Protein of unknown function (DUF567) 3 1 23 25 At5g41730 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 1 24 1 At5g41780 "myosin heavy chain-related weak similarity to M protein, serotype 5 precursor (SP:P02977) {Streptococcus pyogenes} and to Myosin heavy chain, non-muscle (SP:Q99323) (Zipper protein) (Myosin II) {Drosophila melanogaster}" 3 1 24 2 At5g44430 "plant defensin-fusion protein, putative (PDF1.2c) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal protein 1 preprotein [Raphanus sativus] gi|609322|gb|AAA69541" 3 1 24 3 At5g44490 F-box family protein contains F-box domain Pfam:PF00646 3 1 24 4 At5g44640 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to Non-cyanogenic beta-glucosidase precursor (SP:P26204) [Trifolium repens] 3 1 24 5 At5g44700 "leucine-rich repeat transmembrane protein kinase, putative " 3 1 24 6 At5g44830 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Lycopersicon esculentum] GI:4325090; contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) 3 1 24 7 At5g44900 "disease resistance protein (TIR class), putative domain signature TIR exists, suggestive of a disease resistance protein." 3 1 24 8 At5g45050 "disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat" 3 1 24 9 At5g45100 expressed protein 3 1 24 10 At5g47630 "acyl carrier family protein / ACP family protein similar to acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) from {Arabidopsis thaliana} SP|P53665, {Neurospora crassa} SP|P11943; contains Pfam profile PF00550: Phosphopantetheine attachment site" 3 1 24 11 At5g47680 expressed protein contains Pfam profile PF04243: Protein of unknown function (DUF425) 3 1 24 12 At5g47830 expressed protein 3 1 24 13 At5g47880 "eukaryotic peptide chain release factor subunit 1-1 (ERF1-1) identical to SP|Q39097 Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) {Arabidopsis thaliana}, eukaryotic release factor 1 homolog GI:1155261 from [Arabidopsis thaliana]; contains Pfam profiles: PF03463 eRF1 domain 1, PF03464 eRF1 domain 2, PF03465 eRF1 domain 3" 3 1 24 14 At5g48060 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 3 1 24 15 At5g48120 expressed protein low similarity to MMS19 [Mus musculus] GI:14029390 3 1 24 16 At5g48290 heavy-metal-associated domain-containing protein strong similarity to farnesylated proteins ATFP4 [GI:4097549] and ATFP5 [GI:4097551]; contains Pfam profile PF00403: Heavy-metal-associated domain 3 1 24 17 At5g48340 expressed protein 3 1 24 18 At5g51020 expressed protein similar to unknown protein (pir||S76207) 3 1 24 19 At5g51080 RNase H domain-containing protein low similarity to GAG-POL precursor [Oryza sativa (japonica cultivar-group)] GI:5902445; contains Pfam profile PF00075: RNase H 3 1 24 20 At5g51220 ubiquinol-cytochrome C chaperone family protein contains Pfam PF03981: Ubiquinol-cytochrome C chaperone 3 1 24 21 At5g51270 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 3 1 24 22 At5g51430 conserved oligomeric Golgi complex component-related / COG complex component-related contains weak similarity to Conserved oligomeric Golgi complex component 7 (Swiss-Prot:P83436) [Homo sapiens] 3 1 24 23 At5g51490 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 1 24 24 At5g51630 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 1 24 25 At5g51690 "1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative similar to ACC synthases from Solanum tuberosum [GI:520958], Triticum aestivum [GI:1173638]" 3 1 25 1 At5g54440 expressed protein 3 1 25 2 At5g54500 "quinone reductase, putative similar to 1,4-benzoquinone reductase [Phanerochaete chrysosporium][GI:4454993]; contains flavodoxin domain PF00258" 3 1 25 3 At5g54630 "zinc finger protein-related contains Prosite:PS00028 Zinc finger, C2H2 type, domain" 3 1 25 4 At5g54690 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 3 1 25 5 At5g54840 GTP-binding family protein similar to SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase spg1)(Sid3 protein) {Schizosaccharomyces pombe} 3 1 25 6 At5g54890 expressed protein 3 1 25 7 At5g55030 expressed protein 3 1 25 8 At5g55090 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 1 25 9 At5g57770 expressed protein 3 1 25 10 At5g57815 "cytochrome c oxidase subunit 6b, putative similar to subunit 6b of cytochrome c oxidase [Arabidopsis thaliana] gi|6518353|dbj|BAA87883" 3 1 25 11 At5g57950 "26S proteasome regulatory subunit, putative contains similarity to 26S proteasome non-ATPase subunit 9 SP:O00233 from [Homo sapiens]" 3 1 25 12 At5g58005 expressed protein 3 1 25 13 At5g58170 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to Glycerophosphoryl diester phosphodiesterase precursor (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (ImmunoglobulinD-binding protein) (IGD-binding protein) (SP:Q06282) {Haemophilus influenzae} 3 1 25 14 At5g58220 expressed protein 3 1 25 15 At5g58360 ovate family protein 69% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 3 1 25 16 At5g58390 "peroxidase, putative similar to peroxidase [Nicotiana tabacum] gi|5381253|dbj|BAA82306" 3 1 25 17 At5g60990 "DEAD/DEAH box helicase, putative (RH10) probable replication protein A1, Oryza sativa, EMBL:AF009179" 3 1 25 18 At5g61040 expressed protein 3 1 25 19 At5g61200 hypothetical protein 3 1 25 20 At5g61260 chromosome scaffold protein-related contains weak similarity to chromosome scaffold protein p85 [Moneuplotes crassus] gi|25990101|gb|AAN75020 3 1 25 21 At5g61410 "ribulose-phosphate 3-epimerase, chloroplast, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to SP|Q43157 Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) {Spinacia oleracea}; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family" 3 1 25 22 At5g61460 structural maintenance of chromosomes (SMC) family protein very strong similarity to SMC-like protein (MIM) [Arabidopsis thaliana] GI:5880614; contains Pfam profile PF02463: RecF/RecN/SMC N terminal domain 3 1 25 23 At5g61600 ethylene-responsive element-binding family protein contains similarity to ethylene responsive element binding factor 5 (AtERF5) (Swiss-Prot:O80341) [Arabidopsis thaliana]; contains Pfam PF00847: AP2 domain 3 1 25 24 At5g61650 "cyclin family protein similar to cyclin 2 [Trypanosoma brucei] GI:7339572, cyclin 6 [Trypanosoma cruzi] GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 1 25 25 At5g64360 DNAJ heat shock N-terminal domain-containing protein low similarity to AHM1 [Triticum aestivum] GI:6691467; contains Pfam profile PF00226 DnaJ domain 3 1 26 1 At5g64390 KH domain-containing RNA-binding protein (HEN4) contains similarity to RNA-binding protein; identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404; contains Pfam domain PF00013: KH domain; identical to cDNA HEN4 (HEN4) GI:28261402 3 1 26 2 At5g64530 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM (no apical meristem) 3 1 26 3 At5g64580 AAA-type ATPase family protein similar to zinc dependent protease [Arabidopsis thaliana] GI:7650138; contains Pfam profile PF00004: ATPase AAA family 3 1 26 4 At5g64710 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 1 26 5 At5g64770 expressed protein 3 1 26 6 At5g64905 expressed protein 3 1 26 7 At5g64960 "cyclin-dependent kinase, putative / CDK, putative similar to cyclin dependent kinase C [Lycopersicon esculentum] gi|15215944|emb|CAC51391" 3 1 26 8 At5g67470 "formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181" 3 1 26 9 At5g67520 "adenylylsulfate kinase, putative similar to adenylylsulfate kinase, chloroplast precursor (APS kinase, Adenosine-5'phosphosulfate kinase, ATP adenosine-5'- phosphosulfate 3'-phosphotransferase) [Catharanthus roseus] SWISS-PROT:O49204" 3 1 26 10 At1g25155 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana)" 3 1 26 11 At1g73070 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to receptor-like protein kinase INRPK1 [Ipomoea nil] gi|14495542|gb|AAB36558" 3 1 26 12 ath-MIR173 miRNA gene Arabidopsis thaliana miR173 stem-loop 3 1 26 13 ath-MIR156a miRNA gene Arabidopsis thaliana miR156a stem-loop 3 1 26 14 ath-MIR167b miRNA gene Arabidopsis thaliana miR167b stem-loop 3 1 26 15 ath-MIR169c miRNA gene Arabidopsis thaliana miR169c stem-loop 3 1 26 16 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 1 26 17 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 1 26 18 Alien4 Control: Stratagene Spotreport Alien Oligo 3 1 26 19 Alien10 Control: Stratagene Spotreport Alien Oligo 3 1 26 20 atc06 Randomly generated negative control 3 1 26 21 atc12 Randomly generated negative control 3 1 26 22 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 1 26 23 atc02 Randomly generated negative control 3 1 26 24 Blank Blank 3 1 26 25 Blank Blank 3 2 1 1 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 2 1 2 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 2 1 3 Alien4 Control: Stratagene Spotreport Alien Oligo 3 2 1 4 Alien10 Control: Stratagene Spotreport Alien Oligo 3 2 1 5 atc06 Randomly generated negative control 3 2 1 6 atc12 Randomly generated negative control 3 2 1 7 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 1 8 atc02 Randomly generated negative control 3 2 1 9 At1g02730 "cellulose synthase family protein similar to cellulose synthase catalytic subunit [gi:13925881] from Nicotiana alata, cellulose synthase-4 [gi:9622880] from Zea mays" 3 2 1 10 At1g02800 "endo-1,4-beta-glucanase / cellulase (CEL2) identical to endo-1,4-beta glucanase; ATCEL2 GI:3132891 from [Arabidopsis thaliana]" 3 2 1 11 At1g02890 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to mitochondrial sorting protein 1 (MSP1) (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]" 3 2 1 12 At1g02950 "glutathione S-transferase, putative similar to glutathione-S-transferase GI:169887 from [Silene vulgaris]" 3 2 1 13 At1g03055 expressed protein 3 2 1 14 At1g03090 "methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) nearly identical to SP|Q42523 Methylcrotonyl-CoA carboxylase alpha chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase alpha subunit) {Arabidopsis thaliana}" 3 2 1 15 At1g03250 expressed protein 3 2 1 16 At1g03310 "isoamylase, putative / starch debranching enzyme, putative similar to isoamylase isoform 2 [Solanum tuberosum] GI:27728147, isoamylase from [Triticum aestivum] GI:17932898, [Hordeum vulgare] GI:21314275, [Oryza sativa] GI:3252794; contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain; ESTs gb|H36690, gb|AA712462, gb|AA651230 and gb|N95932 come from this gene" 3 2 1 17 At1g05990 "calcium-binding protein, putative strong similarity to calcium-binding protein [Lotus japonicus] GI:18413495; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 2 1 18 At1g06040 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger 3 2 1 19 At1g06170 basic helix-loop-helix (bHLH) family protein contains Pfam profile:PF00010 helix-loop-helix DNA-binding domain 3 2 1 20 At1g06210 "VHS domain-containing protein / GAT domain-containing protein weak similarity to SP|Q9UJY5 ADP-ribosylation factor binding protein GGA1 {Homo sapiens}; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain" 3 2 1 21 At1g06400 Ras-related GTP-binding protein (ARA-2) identical to Ras-related protein ARA-2 SP:P28185 from [Arabidopsis thaliana] 3 2 1 22 At1g06460 31.2 kDa small heat shock family protein / hsp20 family protein contains Pfam profile: PF00011 Hsp20/alpha crystallin family 3 2 1 23 At1g06640 "2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); contains Pfam profile: PF00671 Iron/Ascorbate oxidoreductase family" 3 2 1 24 At1g06680 photosystem II oxygen-evolving complex 23 (OEC23) JBC 14:211-238 (2002); identical to 23 kDa polypeptide of oxygen-evolving comlex (OEC) GB:CAA66785 GI:1769905 [Arabidopsis thaliana] 3 2 1 25 At1g09180 "GTP-binding protein, putative strong similarity to SP:Q01474 GTP-binding protein SAR1B and SP:O04834 GTP-binding protein SAR1A [Arabidopsis thaliana]" 3 2 2 1 At1g09240 "nicotianamine synthase, putative similar to nicotianamine synthase [Lycopersicon esculentum][GI:4753801], nicotianamine synthase 2 [Hordeum vulgare][GI:4894912]" 3 2 2 2 At1g09400 "12-oxophytodienoate reductase, putative similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]" 3 2 2 3 At1g09450 haspin-related similar to haspin (GI:9229937) {Mus musculus} and haploid germ cell-specific nuclear protein kinase (GI:13561418) {Mus musculus} 3 2 2 4 At1g09590 60S ribosomal protein L21 (RPL21A) Similar to L21 family of ribosomal protein; amino acid sequence is identical to F21M12.8 3 2 2 5 At1g09645 expressed protein 3 2 2 6 At1g09795 ATP phosphoribosyl transferase 2 (ATP-PRT2) identical to ATP phosphoribosyl transferase (AtATP-PRT2) [Arabidopsis thaliana] GI:6683619; supporting cDNA gi|6683618|dbj|AB025250.1| 3 2 2 7 At1g09830 "phosphoribosylamine--glycine ligase (PUR2) Identical to phosphoribosylamine--glycine ligase, chloroplast [precursor] SP:P52420 from [Arabidopsis thaliana]" 3 2 2 8 At1g12410 ATP-dependent Clp protease proteolytic subunit (ClpP2) identical to nClpP2 GI:5360589 from [Arabidopsis thaliana] 3 2 2 9 At1g12450 expressed protein 3 2 2 10 At1g12650 expressed protein similar to KED (GI:8096269) [Nicotiana tabacum]; similar to rRNA processing protein EBP2 (SP:P36049) [Saccharomyces cerevisiae] 3 2 2 11 At1g12725 hypothetical protein 3 2 2 12 At1g12870 S locus F-box-related / SLF-related contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain; weakly similar to self-incompatibility (S-) locus F-box (GI:29420811) [Prunus mume] 3 2 2 13 At1g12930 importin-related similar to late gestation lung 2 protein (GI:7274209) {Rattus norvegicus}; similar to Ran binding protein 13 (importin 13)) (GI:8133102) {Homo sapiens}; contains weak hit to Pfam PF03810: Importin-beta N-terminal domain 3 2 2 14 At1g13110 "cytochrome P450 71B7 (CYP71B7) identical to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis thaliana]; PF|00067 Cytochrome P450 family. ESTs gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541 come from this gene; identical to cDNA cytochrome P450 GI:1523795, ATCYP71B7" 3 2 2 15 At1g13170 "oxysterol-binding family protein similar to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains Pfam profiles PF00169: PH domain, PF01237: Oxysterol-binding protein" 3 2 2 16 At1g15820 "chlorophyll A-B binding protein, chloroplast (LHCB6) nearly identical to Lhcb6 protein [Arabidopsis thaliana] GI:4741960; contains Pfam profile PF00504: Chlorophyll A-B binding protein" 3 2 2 17 At1g15870 mitochondrial glycoprotein family protein / MAM33 family protein similar to SUAPRGA1 [Emericella nidulans] GI:6562379; contains Pfam profile PF02330: Mitochondrial glycoprotein 3 2 2 18 At1g16020 expressed protein 3 2 2 19 At1g16060 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana]" 3 2 2 20 At1g16250 "kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 2 2 21 At1g16310 "cation efflux family protein contains cation efflux family protein domain, Pfam:PF01545" 3 2 2 22 At1g16470 "20S proteasome alpha subunit B (PAB1) (PRC3) identical to proteasome subunit alpha type 2 SP:O23708, GI:6093778; identical to cDNA proteasome subunit prc3 GI:2511573" 3 2 2 23 At1g16520 expressed protein 3 2 2 24 At1g19320 "pathogenesis-related thaumatin family protein similar to SP:P28493 Pathogenesis-related protein 5 precursor (PR-5) from [Arabidopsis thaliana], thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family" 3 2 2 25 At1g19380 expressed protein 3 2 3 1 At1g19530 expressed protein 3 2 3 2 At1g19610 "plant defensin-fusion protein, putative (PDF1.4) plant defensin protein family member, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be); similar to SWISS-PROT:P30224, Cysteine-rich antifungal protein 1 precursor (AFP1)[Arabidopsis thaliana]" 3 2 3 3 At1g19790 lateral root primordium (LRP) protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702) 3 2 3 4 At1g19860 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 2 3 5 At1g20050 "C-8,7 sterol isomerase identical to C-8,7 sterol isomerase GI:11279073 from [Arabidopsis thaliana] (Plant Mol. Biol. 38 (5), 807-815 (1998))" 3 2 3 6 At1g20110 zinc finger (FYVE type) family protein contains Pfam profile: PF01363 FYVE zinc finger 3 2 3 7 At1g22885 expressed protein 3 2 3 8 At1g22910 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); similar to GB:AAC33496 3 2 3 9 At1g23060 expressed protein Location of EST gb|T22158 and gb|AA395675 3 2 3 10 At1g23090 "sulfate transporter, putative similar to sulfate transporter [Arabidopsis thaliana] GI:2285885; contains Pfam profiles PF00916: Sulfate transporter family, PF01740: STAS domain" 3 2 3 11 At1g23240 caleosin-related family protein similar to caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum]; similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 3 2 3 12 At1g23300 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 3 2 3 13 At1g23440 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site 3 2 3 14 At1g23490 "ADP-ribosylation factor identical to SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 3 2 3 15 At1g27180 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 3 16 At1g27250 paired amphipathic helix repeat-containing protein weak similarity to transcriptional repressor SIN3B [Mus musculus] GI:2921547; contains Pfam profile PF02671: Paired amphipathic helix repeat 3 2 3 17 At1g27385 expressed protein 3 2 3 18 At1g27435 expressed protein 3 2 3 19 At1g27590 expressed protein similar to hypothetical protein GB:AAD45997 GI:5668770 from (Arabidopsis thaliana) 3 2 3 20 At1g27630 "cyclin family protein similar to cyclin T1 [Homo sapiens] GI:2981196; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 2 3 21 At1g27780 "Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 2 3 22 At1g27850 expressed protein similar to En/Spm-like transposon protein GB:AAB95292 GI:2088658 from [Arabidopsis thaliana] 3 2 3 23 At1g30780 F-box family protein 3 2 3 24 At1g30825 "actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family contains Pfam PF04045: Arp2/3 complex, 34kD subunit p34-Arc; similar to ARP2/3 complex 34 kDa subunit (P34-ARC) (Swiss-Prot:O96623) [Dictyostelium discoideum]; similar to ARP2/3 complex 34 kDa subunit (P34-ARC) (Actin-related protein 2/3 complex subunit 2) (Swiss-Prot:O15144) [Homo sapiens]" 3 2 3 25 At1g31010 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) 3 2 4 1 At1g31070 UDP-N-acetylglucosamine pyrophosphorylase-related low similarity to SP|P43123 UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) {Saccharomyces cerevisiae} 3 2 4 2 At1g31260 "metal transporter, putative (ZIP10) identical to putative metal transporter ZIP10 [Arabidopsis thaliana] gi|17385792|gb|AAL38436; similar to iron-regulated transporter 2 GB:AAD30549 GI:4836773 from [Lycopersicon esculentum]; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 2 4 3 At1g31320 LOB domain protein 4 / lateral organ boundaries domain protein 4 (LBD4) identical to SP|Q9SHE9 LOB domain protein 4 {Arabidopsis thaliana} 3 2 4 4 At1g31490 "transferase family protein contains similarity to anthranilate N-hydroxycinnamoyl benzoyltransferase GI:3288180, GI:2239091 from (Dianthus caryophyllus); contains Pfam profile PF02458 transferase family" 3 2 4 5 At1g31540 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 4 6 At1g34580 "monosaccharide transporter, putative similar to monosaccharide transporter 3 [Oryza sativa] GI:11991114, monosaccharide transporter [Nicotiana tabacum] GI:19885, monosaccharide transporter 1 [Oryza sativa] GI:11991110; contains Pfam profile PF00083: major facilitator superfamily protein" 3 2 4 7 At1g34670 myb family transcription factor similar to myb-related protein mixta GI:485867 from [Antirrhinum majus] 3 2 4 8 At1g35110 "Ulp1 protease family protein similar to At5g28170, At1g44880, At3g42530, At4g19320, At5g36020, At4g03970, At3g43010, At2g10350 ; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 2 4 9 At1g35183 expressed protein ; expression supported by MPSS 3 2 4 10 At1g35410 hypothetical protein 3 2 4 11 At1g35490 bZIP family transcription factor 3 2 4 12 At1g35640 hypothetical protein 3 2 4 13 At1g35710 "leucine-rich repeat transmembrane protein kinase, putative similar to many predicted protein kinases" 3 2 4 14 At1g47330 expressed protein contains Pfam profile PF01595: Domain of unknown function 3 2 4 15 At1g47395 expressed protein 3 2 4 16 At1g47560 expressed protein 3 2 4 17 At1g47625 hypothetical protein this may be a pseudogene. No suitable start codon was identified. 3 2 4 18 At1g47790 F-box family protein contains Pfam:PF00646 F-box domain 3 2 4 19 At1g47820 expressed protein identical to hypothetical protein GB:AAF19740 GI:6634732 from [Arabidopsis thaliana] 3 2 4 20 At1g48030 "dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) identical to GB:AAF34795 [gi:12704696] from [Arabidopsis thaliana]" 3 2 4 21 At1g48090 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain 3 2 4 22 At1g51120 "AP2 domain-containing transcription factor, putative similar to DNA-binding protein RAV1 GI:3868857 from [Arabidopsis thaliana]" 3 2 4 23 At1g51190 "ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099) [Arabidopsis thaliana]" 3 2 4 24 At1g51360 expressed protein 3 2 4 25 At1g51400 photosystem II 5 kD protein 100% identical to GI:4836947 (F5D21.10) 3 2 5 1 At1g51550 F-box family protein similar to F-box ZEITLUPE/FKF/LKP/ADAGIO proteins e.g. GI:13487068 from [Arabidopsis thaliana] 3 2 5 2 At1g51600 zinc finger (GATA type) family protein contains similarity to zinc-finger protein ZIM [Arabidopsis thaliana] gi|8918533|dbj|BAA97679; contains Pfam PF00320: GATA zinc finger 3 2 5 3 At1g51730 RWD domain-containing protein contains Pfam profile PF05773: RWD domain; similar to GCN2 eIF2alpha kinase (GI:6066585) [Mus musculus]; similar to GCN2beta (GI:10764163) [Mus musculus]; similar to RING finger protein 25 (RING finger protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]; similar to RING finger protein 25 (Swiss-Prot:Q96BH1) [Homo sapiens] 3 2 5 4 At1g51790 "leucine-rich repeat protein kinase, putative smilar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 5 5 At1g54400 heat shock family protein contains similarity to Swiss-Prot:P27397 18.0 kDa class I heat shock protein [Daucus carota] 3 2 5 6 At1g54460 expressed protein 3 2 5 7 At1g54640 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain 3 2 5 8 At1g54720 early-responsive to dehydration protein-related / ERD protein-related similar to ERD6 protein [Arabidopsis thaliana] GI:3123712 3 2 5 9 At1g54860 expressed protein 3 2 5 10 At1g54923 hypothetical protein 3 2 5 11 At1g55080 expressed protein 3 2 5 12 At1g55150 "DEAD box RNA helicase, putative (RH20) similar to ethylene-responsive RNA helicase GI:5669638 from [Lycopersicon esculentum]; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 2 5 13 At1g59640 basic helix-loop-helix (bHLH) family protein 3 2 5 14 At1g59680 F-box family protein similar to mDj6 GB:BAA88304 GI:6567123 from [Mus musculus]; contains weak hit to TIGRFAM TIGR01640 : F-box protein interaction domain and weak hit to Pfam PF00646: F-box domain 3 2 5 15 At1g59830 serine/threonine protein phosphatase PP2A-2 catalytic subunit (PP2A2) identical to SP|Q07099 Serine/threonine protein phosphatase PP2A-2 catalytic subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile PF00149: Ser/Thr protein phosphatase 3 2 5 16 At1g59865 expressed protein 3 2 5 17 At1g60000 "29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative similar to 29 kDa ribonucleoprotein chloroplast precursor {Nicotiana sylvestris} SP|Q08935, SP|Q08937; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) contains an AG-donor site at intron." 3 2 5 18 At1g60070 "gamma-adaptin, putative similar to gamma-adaptin GI:2765190 from [Homo sapiens]; contains Pfam profiles PF01602: Adaptin N terminal region, PF02883: Adaptin C-terminal domain" 3 2 5 19 At1g60320 "Toll-Interleukin-Resistance (TIR) domain-containing protein domain signature TIR exists, suggestive of a disease resistance protein." 3 2 5 20 At1g60390 "BURP domain-containing protein / polygalacturonase, putative similar to polygalacturonase isoenzyme 1 beta subunit GI:170480 from [Lycopersicon esculentum]; contains Pfam profile PF03181: BURP domain" 3 2 5 21 At1g63245 "CLE14, putative CLAVATA3/ESR-Related 14 (CLE14)" 3 2 5 22 At1g63280 "serpin-related / serine protease inhibitor-related similar to protein zx [Hordeum vulgare subsp. vulgare] GI:19071, serpin [Triticum aestivum] GI:1885346" 3 2 5 23 At1g63460 "glutathione peroxidase, putative contains Pfam profile: PF00255 glutathione peroxidases" 3 2 5 24 At1g63530 hypothetical protein 3 2 5 25 At1g63670 expressed protein 3 2 6 1 At1g63710 "cytochrome P450, putative similar to cytochrome P450 GB:O23066 [Arabidopsis thaliana]" 3 2 6 2 At1g63855 expressed protein 3 2 6 3 At1g63930 expressed protein ; expression supported by MPSS 3 2 6 4 At1g66700 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to defense-related protein cjs1 [Brassica carinata][GI:14009292][Mol Plant Pathol (2001) 2(3):159-169] 3 2 6 5 At1g66760 "MATE efflux family protein contains TIGRfam profile: TIGR00797: MATE efflux family protein, Pfam profile PF01554: Uncharacterized membrane protein family" 3 2 6 6 At1g66930 serine/threonine protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 2 6 7 At1g66970 glycerophosphoryl diester phosphodiesterase family protein contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family 3 2 6 8 At1g67130 F-box family protein contains Pfam PF00646: F-box domain 3 2 6 9 At1g67190 F-box family protein 3 2 6 10 At1g67360 rubber elongation factor (REF) family protein contains Pfam profile: PF05755 rubber elongation factor protein (REF) 3 2 6 11 At1g67430 60S ribosomal protein L17 (RPL17B) similar to ribosomal protein GI:19101 from [Hordeum vulgare] 3 2 6 12 At1g70080 "terpene synthase/cyclase family protein similar to (+)-delta-cadinene synthase [Gossypium hirsutum][GI:8389329], sesquiterpene synthases [GI:11934937][Lycopersicon hirsutum], [GI:11934933][Lycopersicon esculentum]; contains Pfam profile: PF01397: Terpene synthase family" 3 2 6 13 At1g70120 hypothetical protein 3 2 6 14 At1g70290 "trehalose-6-phosphate synthase, putative similar to Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) from {Kluyveromyces lactis} SP|Q07158, {Saccharomyces cerevisiae} SP|Q00764; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase" 3 2 6 15 At1g70350 expressed protein 3 2 6 16 At1g70490 "ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana]" 3 2 6 17 At1g70530 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 2 6 18 At1g70680 caleosin-related family protein similar to Ca+2-binding EF hand protein GB:AAB71227 [Glycine max]; contains Pfam profile PF05042: Caleosin related protein 3 2 6 19 At1g70740 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 6 20 At1g73590 "auxin efflux carrier protein, putative (PIN1) identical to putative auxin efflux carrier protein; AtPIN1 [Arabidopsis thaliana] GI:4151319; contains Pfam profile PF03547: Auxin Efflux Carrier" 3 2 6 21 At1g73630 "calcium-binding protein, putative similar to calcium binding protein GI:14589311 from [Sesbania rostrata]; contains Pfam profile: PF00036 EF hand (4 copies)" 3 2 6 22 At1g73770 hypothetical protein 3 2 6 23 At1g73820 Ssu72-like family protein contains Pfam profile PF04722: Ssu72-like protein; similar to SSU72 protein (Swiss-Prot:P53538) [Saccharomyces cerevisiae] 3 2 6 24 At1g73980 phosphoribulokinase/uridine kinase family protein weak similarity to SP|Q59190 Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase) (Cytidine monophosphokinase) {Borrelia burgdorferi}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family 3 2 6 25 At1g74040 2-isopropylmalate synthase 1 (IMS1) identical to 2-isopropylmalate synthase (IMS1) [Arabidopsis thaliana] GI:12330687; identical to cDNA 2-isopropylmalate synthase (IMS1) GI:12330686 3 2 7 1 At1g74200 "leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591 disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591" 3 2 7 2 At1g74260 "AIR synthase-related family protein contains Pfam profiles: PF00586 AIR synthase related protein, N-terminal domain, PF02769 AIR synthase related protein, C-terminal domain" 3 2 7 3 AT5G57480 PC-1 B10 3 2 7 4 3XSSC PC-1 B22 3 2 7 5 AT1G29930 PC-1 F10 3 2 7 6 3XSSC PC-1 F22 3 2 7 7 AT3G44150 PC-1 J10 3 2 7 8 3XSSC PC-1 J22 3 2 7 9 AT4G00810 PC-1 N10 3 2 7 10 3XSSC PC-1 N22 3 2 7 11 At1g77050 "DEAD/DEAH box helicase, putative similar to RNA helicase GI:3776027 from [Arabidopsis thaliana]" 3 2 7 12 At1g77080 MADS-box protein AGL27-II (AGL27) / MADS affecting flowering 1 (MAF1) contains similarity to MADS box transcription factor GI:3688591 from [Triticum aestivum]; contains Pfam domain PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain); contains Pfam domain PF01486: K-box region 3 2 7 13 At1g77250 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 3 2 7 14 At1g77310 "wound-responsive protein, putative similar to wound-responsive protein 14.05 (GI:16506638) [Castanea sativa]" 3 2 7 15 At1g77480 "nucellin protein, putative similar to nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare] (nucellin: similar to aspartic protease and its specific expression in nucellar cells during degeneration)" 3 2 7 16 At1g77530 "O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase GB:O23760 [Clarkia breweri], [SP|Q00763] [Populus tremuloides]" 3 2 7 17 At1g77710 expressed protein similar to hypothetical protein GB:P34661 [Caenorhabditis elegans] 3 2 7 18 At1g77765 expressed protein ; expression supported by MPSS 3 2 7 19 At1g80310 expressed protein 3 2 7 20 At1g80370 "cyclin, putative similar to cyclin A2 [Lycopersicon esculentum] GI:5420276; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 2 7 21 At1g80520 expressed protein 3 2 7 22 At1g80580 ethylene-responsive element-binding family protein contains AP2 DNA-binding domain; similar to EREBP-3 (GI:1208496) [Nicotiana tabacum] 3 2 7 23 At1g80760 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 2 7 24 At1g80820 "cinnamoyl-CoA reductase, putative identical to CCR2 (GI:12407990), similar to cinnamoyl CoA reductase from Eucalyptus gunnii [GI:2058311]" 3 2 7 25 At1g80950 phospholipid/glycerol acyltransferase family protein low similarity to SP|Q59601 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) {Neisseria gonorrhoeae}; contains Pfam profile PF01553: Acyltransferase 3 2 8 1 At2g01050 hypothetical protein 3 2 8 2 At2g04020 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL6 (GI:15054390), EXL1 (GI:15054382) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 3 2 8 3 At2g04038 bZIP transcription factor family protein contains Pfam profile: PF00170 bZIP transcription factor 3 2 8 4 At2g04230 F-box family protein contains F-box domain Pfam:PF00646 3 2 8 5 At2g04300 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 8 6 At2g04480 hypothetical protein 3 2 8 7 At2g04540 "3-oxoacyl-[acyl-carrier-protein] synthase II, putative similar to Swiss-Prot:P56902 3-oxoacyl-[acyl-carrier-protein] synthase II (EC 2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II) [Rhizobium meliloti]" 3 2 8 8 At2g04750 "fimbrin-like protein, putative similar to fimbrin-like protein (ATFIM1) [Arabidopsis thaliana] GI:2905893; contains Pfam profile PF00307: Calponin homology (CH) domain" 3 2 8 9 At2g04810 F-box family protein contains F-box domain Pfam:PF00646 3 2 8 10 At2g11626 hypothetical protein 3 2 8 11 At2g11910 expressed protein 3 2 8 12 At2g12520 "hypothetical protein low similarity to protective antigen [Streptococcus pyogenes] GI:8996050, paramyosin [Anisakis simplex] GI:8117843" 3 2 8 13 At2g12875 hypothetical protein 3 2 8 14 At2g13360 "serine-glyoxylate aminotransferase-related similar to serine-glyoxylate aminotransferase (GI:21535798)[Methylobacterium dichloromethanicum; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V]" 3 2 8 15 At2g13510 hypothetical protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 3 2 8 16 At2g13760 hypothetical protein 3 2 8 17 At2g13820 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 2 8 18 At2g17130 isocitrate dehydrogenase subunit 2 / NAD+ isocitrate dehydrogenase subunit 2 nearly identical to NAD+ dependent isocitrate dehydrogenase subunit 2 [Arabidopsis thaliana] GI:1766048 3 2 8 19 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 8 20 At2g17360 40S ribosomal protein S4 (RPS4A) contains ribosomal protein S4 signature from residues 8 to 22 3 2 8 21 At2g17430 "seven transmembrane MLO family protein / MLO-like protein 7 (MLO7) identical to membrane protein Mlo7 [Arabidopsis thaliana] gi|14091584|gb|AAK53800; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley]" 3 2 8 22 At2g17630 "phosphoserine aminotransferase, putative similar to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana]; contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V" 3 2 8 23 At2g17680 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function; expression supported by MPSS 3 2 8 24 At2g17830 "F-box family protein contains Pfam domain, PF00646: F-box domain" 3 2 8 25 At2g17880 "DNAJ heat shock protein, putative similar to J11 protein [Arabidopsis thaliana] GI:9843641; contains Pfam profile PF00226 DnaJ domain" 3 2 9 1 At2g20625 hypothetical protein 3 2 9 2 At2g20660 rapid alkalinization factor (RALF) family protein similar to RALF precursor [Nicotiana tabacum] GI:16566316 3 2 9 3 At2g20800 pyridine nucleotide-disulphide oxidoreductase family protein similar to GI:3718005 alternative NADH-dehydrogenase {Yarrowia lipolytica} ; contains Pfam profile PF00070: Pyridine nucleotide-disulphide oxidoreductase 3 2 9 4 At2g20820 expressed protein . 3 2 9 5 At2g20950 expressed protein 3 2 9 6 At2g21010 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain 3 2 9 7 At2g21185 expressed protein 3 2 9 8 At2g21230 bZIP family transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036) 3 2 9 9 At2g24050 "MIF4G domain-containing protein / MA3 domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain" 3 2 9 10 At2g24120 "DNA-directed RNA polymerase, chloroplast (RPOPT) identical to SP|O24600 DNA-directed RNA polymerase, chloroplast precursor (EC 2.7.7.6) {Arabidopsis thaliana}" 3 2 9 11 At2g24290 expressed protein 3 2 9 12 At2g24350 "RNA recognition motif (RRM)-containing protein low similarity to poly(A) binding protein II from [Xenopus laevis] GI:11527140, [Mus musculus] GI:2351846, [Bos taurus] GI:1051125; contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain" 3 2 9 13 At2g24530 expressed protein ; expression supported by MPSS 3 2 9 14 At2g24590 "splicing factor, putative similar to to RSZp22 protein [Arabidopsis thaliana] gi|2582645|emb|CAA05352" 3 2 9 15 At2g24765 ADP-ribosylation factor 3 (ARF3) identical to GP:453191 ADP-ribosylation factor 3 {Arabidopsis thaliana}; contains domain PF00025: ADP-ribosylation factor family 3 2 9 16 At2g24820 Rieske [2Fe-2S] domain-containing protein similar to Rieske iron-sulfur protein Tic55 from Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske [2Fe-2S] domain 3 2 9 17 At2g27510 "ferredoxin, putative similar to non-photosynthetic ferredoxin from Citrus sinensis [GI:1360725], Ferredoxin, root R-B2 from Raphanus sativus [SP|P14937]; contains Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding domain" 3 2 9 18 At2g27570 "sulfotransferase family protein similar to steroid sulfotransferase from [Brassica napus] GI:3420008, GI:3420006; contains Pfam profile PF00685: Sulfotransferase domain" 3 2 9 19 At2g27740 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) 3 2 9 20 At2g27775 expressed protein 3 2 9 21 At2g27950 expressed protein 3 2 9 22 At2g28010 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 2 9 23 At2g28160 basic helix-loop-helix (bHLH) family protein 3 2 9 24 At2g28220 "aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 2 9 25 At2g30942 expressed protein 3 2 10 1 At2g30990 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) 3 2 10 2 At2g31140 expressed protein 3 2 10 3 At2g31200 actin-depolymerizing factor 6 (ADF6) identical to SP|Q9ZSK2 Actin-depolymerizing factor 6 (ADF-6) (AtADF6) {Arabidopsis thaliana} 3 2 10 4 At2g31350 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme [Arabidopsis thaliana] gi|2570338|gb|AAC49865" 3 2 10 5 At2g31390 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 3 2 10 6 At2g31560 expressed protein 3 2 10 7 At2g31600 expressed protein 3 2 10 8 At2g34230 "hypothetical protein contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 2 10 9 At2g34270 hypothetical protein and genscan 3 2 10 10 At2g34390 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230; an isoform contains a non-consensus GA-AG intron 3 2 10 11 At2g34420 chlorophyll A-B binding protein / LHCII type I (LHB1B2) identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein [Arabidopsis thaliana] GI:16364 3 2 10 12 At2g34570 "expressed protein contains Pfam profile: PF04900 protein of unknown function, DUF652" 3 2 10 13 At2g34620 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 2 10 14 At2g34800 hypothetical protein 3 2 10 15 At2g34860 chaperone protein dnaJ-related contains Pfam PF00684 : DnaJ central domain (4 repeats); similar to Chaperone protein dnaJ (Heat shock protein 40) (SP:Q9UXR9) {Methanosarcina thermophila} 3 2 10 16 At2g37440 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 2 10 17 At2g37500 arginine biosynthesis protein ArgJ family contains Pfam profile: PF01960 ArgJ family 3 2 10 18 At2g37650 "scarecrow-like transcription factor 9 (SCL9) identical to cDNA scarecrow-like 9 (SCL9) mRNA, partial cds GI:4580524" 3 2 10 19 At2g37710 "lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139" 3 2 10 20 At2g37860 expressed protein 3 2 10 21 At2g37920 expressed protein 3 2 10 22 At2g38070 expressed protein and genscan 3 2 10 23 At2g38130 "GCN5-related N-acetyltransferase, putative similar to SP|Q03503 L-A virus GAG protein N-acetyltransferase (EC 2.3.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 3 2 10 24 At2g40670 two-component responsive regulator / response regulator 16 (ARR16) identical to response regulator 16 GI:11870067 from [Arabidopsis thaliana] 3 2 10 25 At2g40730 HEAT repeat-containing protein contains INTERPRO:IPR000357 HEAT repeat 3 2 11 1 At2g40880 "cysteine protease inhibitor, putative / cystatin, putative (FL3-27) similar to PRLI-interacting factor M [Arabidopsis thaliana] GI:11139270, cysteine proteinase inhibitor [Brassica rapa] GI:762785; contains Pfam profile PF00031: Cystatin domain" 3 2 11 2 At2g40920 "F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein family, AtFBX8 (GP:20197464) {Arabidopsis thaliana}|502017|gb|T20576.1|T20576" 3 2 11 3 At2g41050 PQ-loop repeat family protein / transmembrane family protein similar to SP|Q10482 Seven transmembrane protein 1 {Schizosaccharomyces pombe}; contains Pfam profile PF04193: PQ loop repeat 3 2 11 4 At2g41100 "touch-responsive protein / calmodulin-related protein 3, touch-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana]" 3 2 11 5 At2g41250 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q94915 Rhythmically expressed gene 2 protein (DREG-2) {Drosophila melanogaster}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 2 11 6 At2g41330 glutaredoxin family protein contains Pfam profile PF00462: Glutaredoxin 3 2 11 7 At2g43930 protein kinase family protein contains similarity to NPK1-related protein kinase 2 GI:2342425 from [Arabidopsis thaliana] 3 2 11 8 At2g43950 expressed protein 3 2 11 9 At2g44070 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|Q63186 Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) {Rattus norvegicus}; contains Pfam profile PF01008: Initiation factor 2 subunit family 3 2 11 10 At2g44120 60S ribosomal protein L7 (RPL7C) 3 2 11 11 At2g44280 expressed protein 3 2 11 12 At2g44350 "citrate synthase, mitochondrial, putative strong similarity to SP|P20115 Citrate synthase, mitochondrial precursor {Arabidopsis thaliana}; contains Pfam profile PF00285: Citrate synthase" 3 2 11 13 At2g44510 p21Cip1-binding protein-related similar to p21Cip1-binding protein TOK-1beta (GI:7339688) [Homo sapiens]; similar to BRCA2 and Cip1/p21 interacting protein (GI:25989375) [Homo sapiens] 3 2 11 14 At2g44560 glycosyl hydrolase family 9 protein 3 2 11 15 At2g47230 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 2 11 16 At2g47290 hypothetical protein 3 2 11 17 At2g47460 myb family transcription factor (MYB12) similar to myb-related DNA-binding protein GI:1020155 from [Arabidopsis thaliana] 3 2 11 18 At2g47490 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 2 11 19 At2g47650 NAD-dependent epimerase/dehydratase family protein similar to UDP-glucuronic acid decarboxylase Uxs1p from Filobasidiella neoformans GI:14318327; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains non-consensus AT donor splice site at exon 1 and non-consensus AC acceptor splice site at exon 2 3 2 11 20 At2g47710 universal stress protein (USP) family protein similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family 3 2 11 21 At2g47880 "glutaredoxin family protein contains INTERPRO Domain IPR002109, Glutaredoxin (thioltransferase)" 3 2 11 22 At2g47910 expressed protein 3 2 11 23 At3g03240 esterase/lipase/thioesterase family protein contains Interpro entry IPR000379 3 2 11 24 At3g03280 expressed protein 3 2 11 25 At3g03450 "gibberellin response modulator, putative / gibberellin-responsive modulator, putative similar to GAI (GI:2569938), RGA1 (GB:AAC67333) and RGA2 (GI:2339980) [Arabidopsis thaliana]; possible involvement in nitrogen metabolism" 3 2 12 1 At3g03510 "phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000" 3 2 12 2 At3g03690 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein contains Pfam profile: PF02485 Core-2/I-Branching enzyme 3 2 12 3 At3g03750 "SET domain-containing protein low similarity to G9a [Homo sapiens] GI:287865; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif" 3 2 12 4 At3g03890 expressed protein 3 2 12 5 At3g03930 protein kinase-related similar to serine/threonine protein kinase [Chlamydomonas reinhardtii] GI:18139937 3 2 12 6 At3g06450 "anion exchange family protein similar to putative Anion exchanger family members: GB:AAD39673, GB:AAD55295 [Arabidopsis thaliana]" 3 2 12 7 At3g06490 myb family transcription factor (MYB108) identical to transcription factor MYB108 GI:15375290 from [Arabidopsis thaliana] 3 2 12 8 At3g06630 "protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain, PF00989 PAS domain, and PF00785 PAC motif" 3 2 12 9 At3g66654 "peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type" 3 2 12 10 At3g06780 glycine-rich protein 3 2 12 11 At3g06850 branched chain alpha-keto acid dehydrogenase E2 subunit (din3) identical to branched chain alpha-keto acid dehydrogenase E2 subunit (din3) [Arabidopsis thaliana] GI:7021284 3 2 12 12 At3g07010 pectate lyase family protein similar to pectate lyase GP:14531296 from [Fragaria x ananassa] 3 2 12 13 At3g07060 expressed protein ; expression supported by MPSS 3 2 12 14 At3g10100 "filament protein-related similar to YEAST NUF1 protein (Spindle poly body spacer protein SPC110) (SP:P32380) {Saccharomyces cerevisiae}; similar to Myosin heavy chain, smooth muscle isoform (SMMHC) (SP:P35749) {Homo sapiens}" 3 2 12 15 At3g10140 recA family protein contains Pfam profile: PF00154 recA bacterial DNA recombination protein 3 2 12 16 At3g10300 calcium-binding EF hand family protein low similarity to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 2 12 17 At3g10340 "phenylalanine ammonia-lyase, putative similar to phenylalanine ammonia-lyase GB:S48726 [Petroselinum crispum]" 3 2 12 18 At3g10490 no apical meristem (NAM) family protein similar to to NAC2 (GI:645671) [Arabidopsis thaliana]; contains Pfam PF02365: No apical meristem (NAM) protein 3 2 12 19 At3g10525 expressed protein 3 2 12 20 At3g10650 expressed protein 3 2 12 21 At3g10710 pectinesterase family protein contains similarity to pectinesterase GB:AAB57671 [Citrus sinensis]; contains Pfam profile: PF01095 pectinesterase 3 2 12 22 At3g13140 hydroxyproline-rich glycoprotein family protein 3 2 12 23 At3g13190 "myosin heavy chain-related contains weak similarity to Myosin II heavy chain, non muscle (Swiss-Prot:P05659) [Acanthamoeba castellanii]" 3 2 12 24 At3g13275 expressed protein supported by Brassica genomic sequence alignment and EST/cDNA sequences. 3 2 12 25 At3g13330 expressed protein 3 2 13 1 At3g13490 "tRNA synthetase class II (D, K and N) family protein similar to SP|Q9RHV9 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Bacillus stearothermophilus}; contains Pfam profile: PF00152 tRNA synthetases class II (D, K and N)" 3 2 13 2 At3g13550 ubiquitin-conjugating enzyme (COP10) identical to ubiquitin-conjugating enzyme COP10 [Arabidopsis thaliana] GI:20065779; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme 3 2 13 3 At3g13672 seven in absentia (SINA) family protein low similarity to SP|P21461 Developmental protein seven in absentia {Drosophila melanogaster}; contains Pfam profile PF03145: Seven in absentia protein family 3 2 13 4 At3g13710 prenylated rab acceptor (PRA1) family protein weak similarity to prenylated Rab acceptor [Mus musculus] GI:7716652; contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 3 2 13 5 At3g16175 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 3 2 13 6 At3g16230 expressed protein similar to ASC-1 complex subunit P50 (GI:12061189) [Homo sapiens] 3 2 13 7 At3g16410 "jacalin lectin family protein similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767, epithiospecifier [Arabidopsis thaliana] GI:16118845; contains Pfam profiles PF01419 jacalin-like lectin family, PF01344 Kelch motif" 3 2 13 8 At3g16470 jacalin lectin family protein contains Pfam profile: PF01419 jacalin-like lectin domain; similar to myrosinase-binding protein homolog [Arabidopsis thaliana] GI:2997767 3 2 13 9 At3g16600 "SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P31244 DNA repair protein RAD16 {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 2 13 10 At3g16660 expressed protein 3 2 13 11 At3g16820 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 2 13 12 At3g16860 phytochelatin synthetase-related contains Pfam PF04833: Phytochelatin synthetase-like conserved region 3 2 13 13 At3g19510 homeobox protein (HAT 3.1) identical to homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis thaliana] 3 2 13 14 At3g19550 expressed protein 3 2 13 15 At3g19700 "leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich receptor-like protein kinase GB:AAC36318 from [Malus domestica]; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 13 16 At3g19760 "eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative contains DEAD/DEAH helicase domain; similar to RNA helicase GB:CAA09195 from [Arabidopsis thaliana]; identical to cDNA DEAD box RNA helicase, RH2 GI:3775984" 3 2 13 17 At3g19930 sugar transport protein (STP4) identical to GB:S25009 GI:16524 from [Arabidopsis thaliana] 3 2 13 18 At3g19990 expressed protein 3 2 13 19 At3g20130 cytochrome P450 family protein contains Pfam profile: PF00067 cytochrome P450 3 2 13 20 At3g20180 hypothetical protein 3 2 13 21 At3g22900 "RNA polymerase Rpb7 N-terminal domain-containing protein weak similarity to SP|P52433 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RPB7) {Rattus norvegicus}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 3 2 13 22 At3g22950 "ADP-ribosylation factor, putative similar to ADP-ribosylation factor GB:P91924 [Dugesia japonica]" 3 2 13 23 At3g23110 "disease resistance family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780" 3 2 13 24 At3g23170 expressed protein 3 2 13 25 At3g23300 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 2 14 1 At3g23350 expressed protein ; expression supported by MPSS 3 2 14 2 At3g23560 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family 3 2 14 3 At3g23610 "dual specificity protein phosphatase (DsPTP1) identical to DsPTP1 protein GI:4150963 from [Arabidopsis thaliana]; contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain" 3 2 14 4 At3g26445 glycosyl transferase family 17 protein contains Pfam profile PF04724: Glycosyltransferase family 17 3 2 14 5 At3g26500 leucine-rich repeat family protein 3 2 14 6 At3g26640 "transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); similar to ATAN11 (GI:2290528) [Arabidopsis thaliana] (Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam profile: PF00400 WD domain, G-beta repeat (3 copies)" 3 2 14 7 At3g26670 expressed protein 3 2 14 8 At3g26810 "transport inhibitor response protein, putative E3 ubiquitin ligase SCF complex F-box subunit; similar to transport inhibitor response 1 GI:2352492 from [Arabidopsis thaliana]" 3 2 14 9 At3g26850 expressed protein 3 2 14 10 At3g27000 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin 3 2 14 11 At3g27050 expressed protein 3 2 14 12 At3g29970 germination protein-related similar to HvB12D [Hordeum vulgare subsp. vulgare] gi|471319|emb|CAA54065 3 2 14 13 At3g30210 myb family transcription factor (MYB121) contains Pfam profile: PF00249 Myb-like DNA-binding domain (2 copies) 3 2 14 14 At3g30430 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 2 14 15 At3g30490 hypothetical protein 3 2 14 16 At3g30700 hypothetical protein 3 2 14 17 At3g30750 hypothetical protein 3 2 14 18 At3g31350 hypothetical protein 3 2 14 19 At3g31430 hypothetical protein low similarity to zinc finger protein [Arabidopsis thaliana] GI:976277 3 2 14 20 At3g44716 hypothetical protein 3 2 14 21 At3g44755 hypothetical protein 3 2 14 22 At3g44910 "cation/hydrogen exchanger, putative (CHX12) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 3 2 14 23 At3g44960 expressed protein ; expression supported by MPSS 3 2 14 24 At3g45110 hypothetical protein 3 2 14 25 At3g45170 "zinc finger (GATA type) family protein contains GATA-type zinc finger domain, INTERPRO:IPR000679" 3 2 15 1 At3g45380 "hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287" 3 2 15 2 At3g45440 "lectin protein kinase family protein contains Legume lectins beta-chain signature, PROSITE:PS00307 and PS00108: Serine/Threonine protein kinases active-site signature, PROSITE:PS00108" 3 2 15 3 At3g48250 pentatricopeptide (PPR) repeat-containing protein vacontains Pfam profile PF01535: PPR repeat 3 2 15 4 At3g48310 "cytochrome P450 71A22, putative (CYP71A22) Identical to Cytochrome P450 71A22 (SP:Q9STL1)[Arabidopsis thaliana]" 3 2 15 5 At3g48480 hypothetical protein 3 2 15 6 At3g48540 cytidine/deoxycytidylate deaminase family protein similar to SP|P32321 Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase) {Homo sapiens}; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region 3 2 15 7 At3g48720 "transferase family protein similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum,PIR2:T03274; contains Pfam transferase family domain PF00248" 3 2 15 8 At3g48780 "serine C-palmitoyltransferase, putative similar to serine palmitoyltransferase from Solanum tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus musculus [SP|P97363]" 3 2 15 9 At3g48940 "remorin family protein contains Pfam domain, PF03766: Remorin, N-terminal region and Pfam domain, PF03763: Remorin, C-terminal region" 3 2 15 10 At3g49000 RNA polymerase III subunit RPC82 family protein contains Pfam profile: PF05645 RNA polymerase III subunit RPC82 3 2 15 11 At3g51850 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 3 2 15 12 At3g51890 "expressed protein protein At2g40060 - Arabidopsis thaliana, EMBL:AF002109" 3 2 15 13 At3g52050 "5'-3' exonuclease family protein similar to DNA polymerase type I [Rhodothermus sp. 'ITI 518'] gi|4090935|gb|AAC98908 ; contains Pfam profile PF02739: 5'-3' exonuclease, N-terminal resolvase-like domain" 3 2 15 14 At3g52070 expressed protein 3 2 15 15 At3g52220 expressed protein 3 2 15 16 At3g52260 pseudouridine synthase family protein similar to SP|P39219 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli}; contains Pfam profile PF00849: RNA pseudouridylate synthase 3 2 15 17 At3g52430 phytoalexin-deficient 4 protein (PAD4) identical to phytoalexin-deficient 4 protein [Arabidopsis thaliana] GI:6457331; contains Pfam profile PF01764: Lipase 3 2 15 18 At3g52490 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 3 2 15 19 At3g55005 tonneau 1b (TON1b) identical to tonneau 1b (TON1b) GI:11494366 from [Arabidopsis thaliana] 3 2 15 20 At3g55050 serine/threonine protein phosphatase 2C (PP2C6) identical to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; contains TIGRFAM TIGR01573 : CRISPR-associated protein Cas2 3 2 15 21 At3g55210 no apical meristem (NAM) protein-related contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana} 3 2 15 22 At3g55270 MAP kinase phosphatase (MKP1) identical to MAP kinase phosphatase (MKP1) GI:13540262 from [Arabidopsis thaliana] 3 2 15 23 At3g55450 "protein kinase, putative similar to protein kinase APK1B [Arabidopsis thaliana] SWISS-PROT:P46573" 3 2 15 24 At3g55520 "immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative POSSIBLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8) (PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP BINDING IMMUNOPHILIN), rabbit, SWISSPROT:P27124:FKB4_RABBIT" 3 2 15 25 At3g55690 "expressed protein predicted proteins, Arabidopsis thaliana" 3 2 16 1 At3g55740 proline transporter 2 (ProT2) identical to proline transporter 2 GI:1769903 from [Arabidopsis thaliana] 3 2 16 2 At3g58600 "expressed protein hypothetical protein F21M11.17 - Arabidopsis thaliana, EMBL:AC003027" 3 2 16 3 At3g58660 60S ribosomal protein-related contains weak similarity to 60S ribosomal protein L10A (CSA-19) (NEDD-6) (Swiss-Prot:P53026) [Mus musculus] 3 2 16 4 At3g58830 "haloacid dehalogenase (HAD) superfamily protein contains TIGRfam TIGR01668: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 and TIGR01662: hydrolase, HAD-superfamily, subfamily IIIA" 3 2 16 5 At3g58890 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g59270,At1g56610, At3g54160, At1g47920 (syntaxin SYP81),, At5g41830, At3g44180, At1g48390 [Arabidopsis thaliana]" 3 2 16 6 At3g59060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 2 16 7 At3g59100 "glycosyl transferase family 48 protein contains Pfam profile: PF02364 1,3-beta-glucan synthase" 3 2 16 8 At3g59280 "signaling molecule-related contains similarity to mitochondria-associated granulocyte macrophage CSF signaling molecule, mitochondrial precursor (CGI-136) [Mus musculus] SWISS-PROT:Q9CQV1" 3 2 16 9 At3g59320 "integral membrane protein, putative contains Pfam profile PF00892: Integral membrane protein; identical to anthocyanin-related membrane protein 2 (GI:16416385) [Arabidopsis thaliana]" 3 2 16 10 At3g61990 O-methyltransferase family 3 protein several O-methyltransferases - different species; contains Pfam 01596 O-methyltransferase domain 3 2 16 11 At3g62030 "peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) identical to peptidyl-prolyl cis-trans isomerase, chloroplast precursor, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34791; identical to cDNA nuclear-encoded chloroplast stromal cyclophilin (ROC4) GI:405130" 3 2 16 12 At3g62210 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537; expression supported by MPSS" 3 2 16 13 At3g62270 "anion exchange family protein contains similarity to anion exchanger 3, cardiac splice form - Rattus norvegicus, PIR:A42497" 3 2 16 14 At3g62430 F-box family protein contains F-box domain Pfam:PF00646 3 2 16 15 At3g62490 expressed protein hypothetical proteins - Arabidopsis thaliana 3 2 16 16 At3g62660 "glycosyl transferase family 8 protein low similarity to glycosyl transferase lgtC - Neisseria gonorrhoeae, EMBL:AF208062; contains Pfam glycosyl transferase family 8 domain PF01501" 3 2 16 17 At3g62720 "galactosyl transferase GMA12/MNN10 family protein low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe [SP|Q09174]" 3 2 16 18 At4g01595 "mitogen-activated protein kinase, putative (MPK9) contains similarity to MAP kinases" 3 2 16 19 At4g01640 hypothetical protein 3 2 16 20 At4g01790 "ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein / ribonuclease P-related similar to human RNaseP-associate protein P38, GenBank accession number U77664" 3 2 16 21 At4g01850 "S-adenosylmethionine synthetase 2 (SAM2) identical to S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2, AdoMet synthetase 2) [Arabidopsis thaliana] SWISS-PROT:P17562" 3 2 16 22 At4g01970 "galactinol-raffinose galactosyltransferase, putative similar to galactinol-raffinose galactosyltransferase GI:6634701 from [Vigna angularis]" 3 2 16 23 At4g02010 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 16 24 At4g02170 expressed protein ; expression supported by MPSS 3 2 16 25 At4g02200 "drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321" 3 2 17 1 At4g05145 hypothetical protein 3 2 17 2 At4g05200 protein kinase family protein contains Prosite:PS00108: Serine/Threonine protein kinases active-site signature 3 2 17 3 At4g05370 hypothetical protein 3 2 17 4 At4g05430 "glycosyl hydrolase family protein 17 similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]" 3 2 17 5 At4g05620 F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profile PF00646: F-box domain 3 2 17 6 At4g05640 hypothetical protein 3 2 17 7 At4g07310 "hypothetical protein similar to At2g10840, At5g35280, At2g10500, At2g05860, At4g07430, At1g39270" 3 2 17 8 At4g07410 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400) (2 weak); similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina} 3 2 17 9 At4g10560 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 2 17 10 At4g10610 "RNA-binding protein, putative " 3 2 17 11 At4g10790 UBX domain-containing protein low similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1 protein) {Homo sapiens}; contains Pfam profile PF00789: UBX domain 3 2 17 12 At4g10840 kinesin light chain-related low similarity to kinesin light chain [Plectonema boryanum] GI:2645229; contains Pfam profile PF00515 TPR Domain 3 2 17 13 At4g10970 expressed protein 3 2 17 14 At4g11030 "long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative similar to acyl-CoA synthetase (MF7P) gi:1617270 from Brassica napus" 3 2 17 15 At4g11180 disease resistance-responsive family protein / dirigent family protein similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 2 17 16 At4g11230 "respiratory burst oxidase, putative / NADPH oxidase, putative similar to respiratory burst oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868] from Arabidopsis thaliana, respiratory burst oxidase homolog [GI:16549087] from Solanum tuberosum; contains Pfam profile PF01794 Ferric reductase like transmembrane component" 3 2 17 17 At4g13970 expressed protein 3 2 17 18 At4g14020 rapid alkalinization factor (RALF) family protein 3 2 17 19 At4g14160 "transport protein, putative similar to Swiss-Prot:Q15436 protein transport protein Sec23A [Homo sapiens]" 3 2 17 20 At4g14200 expressed protein 3 2 17 21 At4g14330 phragmoplast-associated kinesin-related protein 2 (PAKRP2) identical to cDNA phragmoplast-associated kinesin-related protein 2 (PAKRP2) GI:16973450 3 2 17 22 At4g14370 "disease resistance protein (TIR-NBS-LRR class), putative similar to zinc finger protein (GI:15811367) [Arabidopsis thaliana]; similar to TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar to disease resistance protein RPP1-WsB (GI:3860165) [Arabidopsis thaliana]" 3 2 17 23 At4g14500 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 3 2 17 24 At4g14540 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to LEC1-like protein (GI:22536010) [Phaseolus coccineus] 3 2 17 25 At4g16920 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 18 1 At4g16960 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 18 2 At4g17120 expressed protein 3 2 18 3 At4g17180 glycosyl hydrolase family 17 protein similar to 3-glucanase GI:18483232 from [Sorghum bicolor] 3 2 18 4 At4g17340 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 2 18 5 At4g17410 expressed protein 3 2 18 6 At4g17565 F-box family protein contains F-box domain Pfam:PF00646 3 2 18 7 At4g17610 "tRNA/rRNA methyltransferase (SpoU) family protein similar to TAR RNA loop binding protein [Homo sapiens] GI:1184692; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family" 3 2 18 8 At4g20190 hypothetical protein 3 2 18 9 At4g20250 hypothetical protein 3 2 18 10 At4g20410 gamma-soluble NSF attachment protein / gamma-SNAP identical to gamma-soluble NSF attachment protein; gamma-SNAP [Arabidopsis thaliana] GI:6013206 3 2 18 11 At4g20450 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 2 18 12 At4g20760 short-chain dehydrogenase/reductase (SDR) family protein contains Pfam profile: PF00106 short chain dehydrogenase 3 2 18 13 At4g20820 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 2 18 14 At4g21000 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase 3 2 18 15 At4g21060 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 3 2 18 16 At4g23630 reticulon family protein (RTNLB1) weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon 3 2 18 17 At4g23680 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294060] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family 3 2 18 18 At4g23860 "PHD finger protein-related similar to Pfam profiles PF02207: Putative zinc finger in N-recognin, weak hit to PF00628: PHD-finger" 3 2 18 19 At4g23895 pleckstrin homology (PH) domain-containing protein-related 3 2 18 20 At4g24040 "glycosyl hydrolase family protein 37 / trehalase, putative similar to trehalase 1 GMTRE1 GI:4559292 from [Glycine max]" 3 2 18 21 At4g24100 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 2 18 22 At4g24260 "endo-1,4-beta-glucanase, putative / cellulase, putative similar to endo-1,4-beta-D-glucanase; cellulase GI:5689613 from [Brassica napus]" 3 2 18 23 At4g24280 "heat shock protein 70, putative / HSP70, putative strong similarity to heat shock protein 70 [Arabidopsis thaliana] GI:6746592; similar to heat shock 70 protein - Spinacia oleracea,PID:g2654208" 3 2 18 24 At4g26860 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 3 2 18 25 At4g26910 "2-oxoacid dehydrogenase family protein similar to SP|P36957 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) {Homo sapiens}; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme" 3 2 19 1 At4g27060 expressed protein 3 2 19 2 At4g27120 expressed protein 3 2 19 3 At4g27300 "S-locus protein kinase, putative similar to receptor protein kinase [Ipomoea trifida] gi|836954|gb|AAC23542; contains S-locus glycoprotein family domain, Pfam:PF00954" 3 2 19 4 At4g27360 "dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1" 3 2 19 5 At4g27520 plastocyanin-like domain-containing protein similar to PIR|JC7196 phytocyanin-related protein Pn14 {Ipomoea nil}; contains Pfam profile PF02298: Plastocyanin-like domain 3 2 19 6 At4g27580 expressed protein 3 2 19 7 At4g30150 expressed protein 3 2 19 8 At4g30200 "expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1|" 3 2 19 9 At4g30350 heat shock protein-related contains similarity to heat shock protein 101 [Triticum aestivum] gi|6013196|gb|AAF01280 3 2 19 10 At4g30410 expressed protein similar to cDNA bHLH transcription factor (bHLH eta gene) gi:32563007 3 2 19 11 At4g30540 glutamine amidotransferase class-I domain-containing protein similar to defense-related protein [Brassica carinata] GI:14009290; contains Pfam profile PF00117: glutamine amidotransferase class-I 3 2 19 12 At4g30600 "signal recognition particle receptor alpha subunit family protein similar to Signal recognition particle receptor alpha subunit (SR-alpha) (Docking protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens}; similar to Signal recognition particle receptor alpha subunit (SR-alpha) (Docking protein alpha) (DP-alpha) (SP:P06625) [Canis familiaris}; contains Pfam PF04086: Signal recognition particle, alpha subunit, N-terminal; contains Pfam PF00448: SRP54-type protein, GTPase domain" 3 2 19 13 At4g30760 "expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 2 19 14 At4g30810 serine carboxypeptidase S10 family protein similar to serine-type carboxypeptidase (SP:P55748) [Hordeum vulgare] 3 2 19 15 At4g33300 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 19 16 At4g33360 terpene cyclase/mutase-related low similarity to squalene-hopene cyclase from Zymomonas mobilis [SP|P33990] 3 2 19 17 At4g33520 "metal-transporting P-type ATPase, putative (PAA1) nearly identical to gi:2668492; contains Pfam heavy-metal-associated domain PF00403" 3 2 19 18 At4g33565 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 2 19 19 At4g33720 "pathogenesis-related protein, putative similar to SP|P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein" 3 2 19 20 At4g33780 expressed protein 3 2 19 21 At4g33925 expressed protein 3 2 19 22 At4g33970 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 2 19 23 AT5G57480 PC-1 B10 3 2 19 24 3XSSC PC-1 B22 3 2 19 25 AT1G29930 PC-1 F10 3 2 20 1 3XSSC PC-1 F22 3 2 20 2 AT3G44150 PC-1 J10 3 2 20 3 3XSSC PC-1 J22 3 2 20 4 AT4G00810 PC-1 N10 3 2 20 5 3XSSC PC-1 N22 3 2 20 6 At4g36530 "hydrolase, alpha/beta fold family protein low similarity to hydrolase [Sphingomonas sp.] GI:3426124; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 2 20 7 At4g36570 myb family transcription factor conatins PFAM profile: PF00249 myb-like DNA binding domain 3 2 20 8 At4g36720 "abscisic acid-responsive HVA22 family protein low similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family" 3 2 20 9 At4g36760 aminopeptidase P similar to Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 3 2 20 10 At4g36920 floral homeotic protein APETALA2 (AP2) Identical to (SP:P47927) Floral homeotic protein APETALA2. [Mouse-ear cress] {Arabidopsis thaliana} 3 2 20 11 At4g36980 expressed protein 3 2 20 12 At4g37160 multi-copper oxidase type I family protein contains Pfam profile: PF00394 Multicopper oxidase 3 2 20 13 At4g37210 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|Q02508 Protein HGV2 Halocynthia roretzi; contains Pfam profile PF00515 TPR Domain 3 2 20 14 At4g39800 inositol-3-phosphate synthase isozyme 1 / myo-inositol-1-phosphate synthase 1 / MI-1-P synthase 1 / IPS 1 identical to SP|P42801 Inositol-3-phosphate synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1- phosphate synthase 1) (MI-1-P synthase 1) (IPS 1) {Arabidopsis thaliana} 3 2 20 15 At4g39860 expressed protein 3 2 20 16 At4g40010 "serine/threonine protein kinase, putative similar to serine-threonine protein kinase [Triticum aestivum] gi|2055374|gb|AAB58348" 3 2 20 17 At4g40050 expressed protein 3 2 20 18 At5g01090 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 3 2 20 19 At5g01150 hypothetical protein contains Pfam profile PF05056: Protein of unknown function (DUF674) 3 2 20 20 At5g01280 expressed protein 3 2 20 21 At5g01340 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 2 20 22 At5g04045 Expressed protein 3 2 20 23 At5g04110 "DNA topoisomerase II family protein siimilar to DNA topoisomerase II subunit B [Thermotoga maritima] GI:1622792; contains Pfam profiles PF00204: DNA topoisomerase II (N-terminal region), PF00249: Myb-like DNA-binding domain" 3 2 20 24 At5g04270 zinc finger (DHHC type) family protein low similarity to Golgi-specific DHHC zinc figer protein [Mus musculus] GI:21728103; contains Pfam profile PF01529: DHHC zinc finger domain 3 2 20 25 At5g04340 "zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type" 3 2 21 1 At5g04510 "3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166" 3 2 21 2 At5g04590 "sulfite reductase / ferredoxin (SIR) identical to sulfite reductase [Arabidopsis thaliana] GI:804953, GI:2584721" 3 2 21 3 At5g04760 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 2 21 4 At5g04800 "40S ribosomal protein S17 (RPS17D) 40S ribosomal protein S17, Lycopersicon esculentum, EMBL:AF161704" 3 2 21 5 At5g07340 "calnexin, putative identical to calnexin homolog 2 from Arabidopsis thaliana [SP|Q38798], strong similarity to calnexin homolog 1, Arabidopsis thaliana, EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262 calreticulin family" 3 2 21 6 At5g07390 respiratory burst oxidase protein A (RbohA) / NADPH oxidase identical to respiratory burst oxidase protein A from Arabidopsis thaliana [gi:3242781] 3 2 21 7 At5g07560 "glycine-rich protein (GRP20) oleosin; glycine-rich protein 20 (GRP20); similar to - Brassica napus, PIR:S50195" 3 2 21 8 At5g07620 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 21 9 At5g07810 "SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein similar to HepA-related protein HARP [Homo sapiens] GI:6693791; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF01844: HNH endonuclease" 3 2 21 10 At5g07870 "transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458" 3 2 21 11 At5g08050 "expressed protein predicted protein, Arabidopsis thaliana" 3 2 21 12 At5g08100 L-asparaginase / L-asparagine amidohydrolase identical to Swiss-Prot:P50287 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) [Arabidopsis thaliana] 3 2 21 13 At5g11130 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 2 21 14 At5g11170 "DEAD/DEAH box helicase, putative (RH15) DEAD BOX RNA helicase RH15, Arabidopsis thaliana, EMBL:ATH010466" 3 2 21 15 At5g11340 "GCN5-related N-acetyltransferase (GNAT) family protein low similarity to SP|Q03503 L-A virus GAG protein N-acetyltransferase (EC 2.3.1.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00583: acetyltransferase, GNAT family" 3 2 21 16 At5g11400 "protein kinase-related contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 2 21 17 At5g11580 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein contains Pfam PF00415 : Regulator of chromosome condensation (RCC1); similar to rjs protein (GI:3414809) [Mus musculus]; similar to HERC2 (GI:4079809) [Homo sapiens];similar to UVB-resistance protein UVR8 (GI:10177674) {Arabidopsis thaliana} 3 2 21 18 At5g11620 "SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related contains weak similarity to Swiss-Prot:P53349 mitogen-activated protein kinase kinase kinase 1 (MAPK/ERK kinase kinase 1, MEK kinase 1, MEKK 1) [Mus musculus]; contains Pfam profile PF04434: SWIM zinc finger" 3 2 21 19 At5g11800 "K+ efflux antiporter, putative (KEA6) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; similar to glutathione-regulated potassium-efflux system protein KEFB, Escherichia coli, SWISSPROT:P45522" 3 2 21 20 At5g11860 NLI interacting factor (NIF) family protein contains Pfam profile PF03031: NLI interacting factor 3 2 21 21 At5g15000 hypothetical protein 3 2 21 22 At5g15060 hypothetical protein 3 2 21 23 At5g15220 "ribosomal protein L27 family protein ribosomal protein L27, Haemophilus influenzae, PIR:F64099" 3 2 21 24 At5g15270 "KH domain-containing protein various predicted proteins, Arabidopsis thaliana and Oryza sativa" 3 2 21 25 At5g15460 expressed protein 3 2 22 1 At5g15500 "ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat" 3 2 22 2 At5g15650 reversibly glycosylated polypeptide-2 (RGP2) identical to reversibly glycosylated polypeptide-2 [Arabidopsis thaliana] GI:2317731 3 2 22 3 At5g15710 "F-box family protein unusual floral organs protein UFO - Arabidopsis thaliana, PIR:S57710" 3 2 22 4 At5g18350 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 22 5 At5g18400 expressed protein contains Pfam profile PF05093: Protein of unknown function (DUF689) 3 2 22 6 At5g18540 periplasmic cytochrome C-related contains weak similarity to periplasmic cytochrome C (GI:15594131) [Thermus thermophilus] 3 2 22 7 At5g18600 "glutaredoxin family protein contains glutaredoxin domain, INTERPRO:IPR002109" 3 2 22 8 At5g18730 hypothetical protein predicted proteins - Arabidopsis thaliana 3 2 22 9 At5g18790 "ribosomal protein L33 family protein ribosomal protein L33, Rickettsia prowazekii, PIR:E71650" 3 2 22 10 At5g18940 Mo25 family protein similar to SP|Q06138 MO25 protein {Mus musculus}; contains Pfam profile PF03204: Mo25 protein family 3 2 22 11 At5g18980 expressed protein 3 2 22 12 At5g22310 expressed protein 3 2 22 13 At5g22360 synaptobrevin family protein similar to Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens] 3 2 22 14 At5g22540 expressed protein contains Pfam profile PF03140: Plant protein of unknown function 3 2 22 15 At5g22570 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain 3 2 22 16 At5g22730 F-box family protein contains F-box domain Pfam:PF00646 3 2 22 17 At5g22780 "adaptin family protein similar to SP|P18484 adaptor-related protein complex 2 alpha 2 subunit (Alpha-adaptin C) (Clathrin assembly protein complex 2 alpha-C large chain) {Rattus norvegicus}; contains Pfam profiles PF01602 Adaptin N terminal region, PF02883 Adaptin C-terminal domain" 3 2 22 18 At5g22940 exostosin family protein contains Pfam profile: PF03016 exostosin family 3 2 22 19 At5g23000 myb family transcription factor (MYB37) contains PFAM profile: myb DNA binding domain PF00249; 3 2 22 20 At5g25580 expressed protein 3 2 22 21 At5g25640 expressed protein ; expression supported by MPSS 3 2 22 22 At5g25880 "malate oxidoreductase, putative similar to NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (SP:P12628) {Phaseolus vulgaris}" 3 2 22 23 At5g25940 early nodulin-related contains weak similarity to Swiss-Prot:Q02921 early nodulin 93 (N-93) [Glycine max] 3 2 22 24 At5g26090 hypothetical protein 3 2 22 25 At5g26150 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 23 1 At5g26310 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 2 23 2 At5g26570 glycoside hydrolase starch-binding domain-containing protein similar to SEX1 (starch excess) [Arabidopsis thaliana] GI:12044358; contains Pfam profile PF00686: Starch binding domain 3 2 23 3 At5g32590 "myosin heavy chain-related similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)(SP:Q99323) {Drosophila melanogaster}" 3 2 23 4 At5g32621 expressed protein contains Pfam profile PF04827: Protein of unknown function (DUF635) 3 2 23 5 At5g33393 hypothetical protein 3 2 23 6 At5g33898 hypothetical protein 3 2 23 7 At5g34887 expressed protein 3 2 23 8 At5g34940 "glycosyl hydrolase family 79 N-terminal domain-containing protein similar to beta-glucuronidase precursor [Scutellaria baicalensis] GI:8918740; contains Pfam profile PF03662: Glycosyl hydrolase family 79, N-terminal domain" 3 2 23 9 At5g35180 expressed protein 3 2 23 10 At5g35220 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease 3 2 23 11 At5g38380 expressed protein 3 2 23 12 At5g38420 "ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) identical to SP|P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) {Arabidopsis thaliana}" 3 2 23 13 At5g38590 F-box family protein contains F-box domain Pfam:PF00646 3 2 23 14 At5g38640 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to SP|P41111 Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) {Oryctolagus cuniculus}; contains Pfam profile PF01008: Initiation factor 2 subunit family 3 2 23 15 At5g38820 amino acid transporter family protein low similarity to N system amino acids transporter NAT-1 [Mus musculus] GI:7406950; contains Pfam profile PF01490: Transmembrane amino acid transporter protein 3 2 23 16 At5g38890 exoribonuclease-related similar to SP|P53859 3'-5' exoribonuclease CSL4 (EC 3.1.13.-) {Saccharomyces cerevisiae} 3 2 23 17 At5g39040 "ABC transporter (TAP2) TAP-like ABC transporter, Rattus norvegicus, EMBL:AB027520; identical to cDNA transporter associated with antigen processing-like protein (TAP2); GI:19335723" 3 2 23 18 At5g39120 "germin-like protein, putative similar to germin -like protein GLP6, Arabidopsis thaliana, EMBL:ATU75194 [SP|P92997]" 3 2 23 19 At5g41960 expressed protein 3 2 23 20 At5g42020 luminal binding protein 2 (BiP-2) (BP2) similar to SWISS-PROT: Q39043; GI:1303695; luminal binding protein (BiP) [Arabidopsis thaliana] 3 2 23 21 At5g42160 "GDSL-motif lipase/hydrolase protein-related similar to SP|P40602 Anther-specific proline-rich protein APG precursor {Arabidopsis thaliana}, family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]" 3 2 23 22 At5g42220 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 23 23 At5g42380 "calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]" 3 2 23 24 At5g42440 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 2 23 25 At5g42630 myb family transcription factor (KAN4) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA GARP-like putative transcription factor KANADI4 (KAN4) GI:15723592 3 2 24 1 At5g42670 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 2 24 2 At5g45240 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 2 24 3 At5g45280 "pectinacetylesterase, putative similar to pectinacetylesterase precursor GI:1431629 from [Vigna radiata]" 3 2 24 4 At5g45410 expressed protein similar to unknown protein (pir||T05524) 3 2 24 5 At5g45470 "expressed protein contains Pfam domain, PF04578: Protein of unknown function, DUF594" 3 2 24 6 At5g45620 "26S proteasome regulatory subunit, putative (RPN9) contains similarity to 26S proteasome subunit p40.5 GI:3618343 from [Homo sapiens]" 3 2 24 7 At5g45670 "GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 2 24 8 At5g45810 CBL-interacting protein kinase 19 (CIPK19) identical to CBL-interacting protein kinase 19 [Arabidopsis thaliana] gi|14009296|gb|AAK50347 3 2 24 9 At5g45870 "Bet v I allergen family protein similar to class 10 PR protein [Medicago sativa] GI:13928071, cytokinin-specific binding protein [Vigna radiata] GI:4190976; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 3 2 24 10 At5g48460 "fimbrin-like protein, putative strong similarity to fimbrin-like protein AtFim2 [Arabidopsis thaliana] GI:2737926; contains Pfam profile PF00307: Calponin homology (CH) domain" 3 2 24 11 At5g48510 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] 3 2 24 12 At5g48655 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 2 24 13 At5g48680 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 3 2 24 14 At5g48860 hypothetical protein 3 2 24 15 At5g48920 "hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 2 24 16 At5g49070 "beta-ketoacyl-CoA synthase family protein similar to very-long-chain fatty acid condensing enzyme CUT1 [GI:5001734], beta-ketoacyl-CoA synthase [Simmondsia chinensis][GI:1045614]" 3 2 24 17 At5g49130 MATE efflux family protein contains Pfam profile PF01554: MatE Uncharacterized membrane protein family 3 2 24 18 At5g51850 expressed protein similar to unknown protein (emb|CAB81354.1) 3 2 24 19 At5g51890 peroxidase-related similar to peroxidase [Spinacia oleracea] gi|2956707|emb|CAA76376 3 2 24 20 At5g52060 BAG domain-containing protein contains Pfam:PF02179 BAG domain 3 2 24 21 At5g52110 expressed protein similar to unknown protein (pir||S76150) 3 2 24 22 At5g52280 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} 3 2 24 23 At5g52340 exocyst subunit EXO70 family protein strong similarity to unknown protein (emb|CAB83315.1); contains Pfam domain PF03081: Exo70 exocyst complex subunit; 3 2 24 24 At5g52520 "tRNA synthetase class II (G, H, P and S) family protein similar to SP|P07814 Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] {Homo sapiens}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain" 3 2 24 25 At5g52560 UDP-N-acetylglucosamine pyrophosphorylase-related contains weak similarity to UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (Swiss-Prot:O74933) [Candida albicans] 3 2 25 1 At5g55220 "trigger factor type chaperone family protein contains Pfam profiles PF05697: Bacterial trigger factor protein (TF), PF05698: Bacterial trigger factor protein (TF) C-terminus, PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 2 25 2 At5g55280 "cell division protein FtsZ, chloroplast, putative (FTSZ) identical to SP|Q42545 Cell division protein ftsZ homolog, chloroplast precursor {Arabidopsis thaliana}; similar to FtsZ1 [Tagetes erecta] GI:8896066; contains Pfam profiles PF00091: Tubulin/FtsZ family, GTPase domain, PF03953: Tubulin/FtsZ family, C-terminal domain" 3 2 25 3 At5g55460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam profile: PF00234 protease inhibitor/seed storage/LTP family 3 2 25 4 At5g55510 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein weak similarity to SP|Q99595 Mitochondrial import inner membrane translocase subunit TIM17 A {Homo sapiens}; contains Pfam profile PF02466: Mitochondrial import inner membrane translocase subunit Tim17 3 2 25 5 At5g55650 hypothetical protein 3 2 25 6 At5g55710 expressed protein 3 2 25 7 At5g55880 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 3 2 25 8 At5g55940 expressed protein contains Pfam PF03665: Uncharacterised protein family (UPF0172) 3 2 25 9 At5g58540 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 2 25 10 At5g58590 "Ran-binding protein 1, putative / RanBP1, putative strong similarity to Ran binding proteins from Arabidopsis thaliana atranbp1a [Arabidopsis thaliana] GI:2058282, atranbp1b [Arabidopsis thaliana] GI:2058284; contains Pfam profile PF00638: RanBP1 domain" 3 2 25 11 At5g58750 wound-responsive protein-related similar to induced upon wounding stress [Arabidopsis thaliana] GI:1483218 3 2 25 12 At5g58787 "zinc finger (C3HC4-type RING finger) family protein similar to MTD2 [Medicago truncatula] GI:9294812; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger)" 3 2 25 13 At5g58970 uncoupling protein (UCP2) identical to uncoupling protein GI:4063007 from [Arabidopsis thaliana] 3 2 25 14 At5g59010 "protein kinase-related low similarity to serine/threonine/tyrosine-specific protein kinase APK1, Arabidopsis thaliana, SP|Q06548 PIR:S28615; contains Pfam profile: PF00069 Eukaryotic protein kinase domain" 3 2 25 15 At5g59160 serine/threonine protein phosphatase PP1 isozyme 2 (TOPP2) identical to SP|P48482 Serine/threonine protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) {Arabidopsis thaliana} 3 2 25 16 At5g59200 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 2 25 17 At5g61810 "mitochondrial substrate carrier family protein similar to peroxisomal Ca-dependent solute carrier, Oryctolagus cuniculus,GI:2352427; contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 2 25 18 At5g61880 "signaling molecule-related contains similarity to mitochondria-associated granulocyte macrophage CSF signaling molecule, mitochondrial precursor (CGI-136) [Mus musculus] SWISS-PROT:Q9CQV1" 3 2 25 19 At5g62060 F-box family protein contains F-box domain Pfam:PF00646 3 2 25 20 At5g62110 hypothetical protein 3 2 25 21 At5g62270 expressed protein 3 2 25 22 At5g62330 expressed protein 3 2 25 23 At5g62490 ABA-responsive protein (HVA22b) identical to AtHVA22b [Arabidopsis thaliana] GI:4884934 3 2 25 24 At5g62550 expressed protein 3 2 25 25 At5g65090 endonuclease/exonuclease/phosphatase family protein similar to inositol polyphosphate 5-phosphatase I (GI:10444261) and II (GI:10444263) [Arabidopsis thaliana]; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 2 26 1 At5g65160 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain 3 2 26 2 At5g65290 LMBR1 integral membrane family protein contains Pfam PF04791: LMBR1-like conserved region 3 2 26 3 At5g65350 "histone H3 nearly identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4" 3 2 26 4 At5g65500 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain 3 2 26 5 At5g65560 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 2 26 6 At5g65710 "leucine-rich repeat transmembrane protein kinase, putative " 3 2 26 7 At5g65770 nuclear matrix constituent protein-related low similarity to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 3 2 26 8 ath-MIR166e miRNA gene Arabidopsis thaliana miR166e stem-loop 3 2 26 9 ath-MIR156d miRNA gene Arabidopsis thaliana miR156d stem-loop 3 2 26 10 ath-MIR169m miRNA gene Arabidopsis thaliana miR169m stem-loop 3 2 26 11 ath-MIR395d miRNA gene Arabidopsis thaliana miR395d stem-loop 3 2 26 12 3xSSC 3xSSC 3 2 26 13 3xSSC 3xSSC 3 2 26 14 3xSSC 3xSSC 3 2 26 15 3xSSC 3xSSC 3 2 26 16 At3g51840 short-chain acyl-CoA oxidase identical to Short-chain acyl CoA oxidase [Arabidopsis thaliana] GI:5478795; contains InterPro entry IPR006089: Acyl-CoA dehydrogenase 3 2 26 17 At5g62690 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} 3 2 26 18 Alien4 Control: Stratagene Spotreport Alien Oligo 3 2 26 19 Alien10 Control: Stratagene Spotreport Alien Oligo 3 2 26 20 atc06 Randomly generated negative control 3 2 26 21 atc12 Randomly generated negative control 3 2 26 22 At2g17190 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 2 26 23 atc02 Randomly generated negative control 3 2 26 24 Blank Blank 3 2 26 25 Blank Blank 3 3 1 1 atc04 Randomly generated negative control 3 3 1 2 atc10 Randomly generated negative control 3 3 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 3 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 3 3 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 3 3 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 3 3 1 7 atc08 Randomly generated negative control 3 3 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 3 3 1 9 At1g02040 "zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type" 3 3 1 10 At1g02070 expressed protein 3 3 1 11 At1g02190 "CER1 protein, putative similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from [Arabidopsis thaliana]" 3 3 1 12 At1g02230 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) protein 3 3 1 13 At1g02405 "proline-rich family protein contains proline-rich region, INTERPRO:IPR000694" 3 3 1 14 At1g02460 "glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 3 1 15 At1g02650 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226: DnaJ domain 3 3 1 16 At1g02690 "importin alpha-2 subunit, putative similar to importin alpha-2 subunit (Karyopherin alpha-2 subunit) (KAP alpha) SP:O04294 from [Arabidopsis thaliana]" 3 3 1 17 At1g05300 "metal transporter, putative (ZIP5) identical to putative metal transporter ZIP5 [Arabidopsis thaliana] gi|17385784|gb|AAL38432; similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 1 18 At1g05350 thiF family protein low similarity to SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia coli}; contains Pfam profile PF00899: ThiF family 3 3 1 19 At1g05510 expressed protein 3 3 1 20 At1g05570 "callose synthase 1 (CALS1) / 1,3-beta-glucan synthase 1 nearly identical to callose synthase 1 catalytic subunit [Arabidopsis thaliana] GI:13649388" 3 3 1 21 At1g05710 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413; identical to bHLH transcription factor (bHLH-alpha gene)" 3 3 1 22 At1g05760 "jacalin lectin family protein (RTM1) identical to gi:6503088 (GB:AAF14583) from [Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494 (2000)); contains Pfam profile PF01419 jacalin-like lectin domain" 3 3 1 23 At1g05890 zinc finger protein-related contains low similarity to zinc finger proteins and Pfam PF01485: IBR domain 3 3 1 24 At1g05930 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) 3 3 1 25 At1g08450 calreticulin 3 (CRT3) identical to similar to SP|O04153 Calreticulin 3 precursor {Arabidopsis thaliana} 3 3 2 1 At1g08500 plastocyanin-like domain-containing protein 3 3 2 2 At1g08660 glycosyl transferase family 29 protein / sialyltransferase family protein contains Pfam profile: PF00777 sialyltransferase (Glycosyltransferase family 29) 3 3 2 3 At1g08710 F-box family protein similar to ESTs gb|T22270 and gb|T76886 ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 3 3 2 4 At1g08840 "DNA replication helicase, putative similar to helicase [Xenopus laevis] gi|18845092|gb|AAL79550" 3 3 2 5 At1g08910 zinc finger (MIZ type) family protein similar to putative variable cytadhesin protein (GI:7677312) {Mycoplasma gallisepticum}; contains Pfam PF02891: MIZ zinc finger domain 3 3 2 6 At1g09070 "C2 domain-containing protein / src2-like protein, putative similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain; identical to cDNA src2-like protein GI:3426059" 3 3 2 7 At1g09150 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein similar to MCT-1 (putative oncogene) [Homo sapiens] GI:6177738; contains Pfam profile PF01472: PUA domain 3 3 2 8 At1g11710 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 2 9 At1g11765 S1 self-incompatibility protein-related contains weak similarity to S1 self-incompatibility protein [Papaver rhoeas] gi|452430|emb|CAA52380 3 3 2 10 At1g11905 expressed protein 3 3 2 11 At1g11930 "alanine racemase family protein contains Pfam domain, PF01168: Alanine racemase, N-terminal domain" 3 3 2 12 At1g12080 expressed protein 3 3 2 13 At1g12140 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase [Cavia porcellus] GI:191259; contains Pfam profile PF00743: Flavin-binding monooxygenase-like 3 3 2 14 At1g12320 expressed protein 3 3 2 15 At1g12370 type II CPD photolyase PHR1 (PHR1) nearly identical to type II CPD photolyase PHR1 [Arabidopsis thaliana] GI:2984707; similar to class II DNA photolyase (GI:5081541) [Chlamydomonas reinhardtii]; supporting cDNA gi|2984706|gb|AF053365.1|AF053365 3 3 2 16 At1g15130 hydroxyproline-rich glycoprotein family protein 3 3 2 17 At1g15165 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 3 3 2 18 At1g15290 tetratricopeptide repeat (TPR)-containing protein ESTs gb|F20110 and gb|F20109 come from this gene; contains Pfam profile PF00515: TPR Domain 3 3 2 19 At1g15350 expressed protein 3 3 2 20 At1g15470 "transducin family protein / WD-40 repeat family protein Strong similarity to gb AF096285 serine-threonine kinase receptor-associated protein from Mus musculus and contains 5 PF|00400 WD40, G-beta repeat domains. EST gb|F14050 comes from this gene" 3 3 2 21 At1g15530 "receptor lectin kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain" 3 3 2 22 At1g15730 "PRLI-interacting factor L, putative strong similarity to PRLI-interacting factor L GI:11139268 from [Arabidopsis thaliana]; contains Pfam profile PF02492: Cobalamin synthesis protein/P47K" 3 3 2 23 At1g15790 expressed protein 3 3 2 24 At1g18550 kinesin motor protein-related contains similarity to kinesin-related protein GI:4493964 from [Plasmodium falciparum] 3 3 2 25 At1g18610 kelch repeat-containing protein contains Pfam profile PF01344: Kelch motif 3 3 3 1 At1g18780 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 3 2 At1g18850 expressed protein 3 3 3 3 At1g19010 expressed protein 3 3 3 4 At1g19050 two-component responsive regulator / response regulator 7 (ARR7) identical to response regulator 7 GI:3953603 from [Arabidopsis thaliana] 3 3 3 5 At1g19200 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 3 3 3 6 At1g19260 hAT dimerisation domain-containing protein 3 3 3 7 At1g22160 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 3 8 At1g22220 F-box family protein contains F-box domain Pfam:PF00646 3 3 3 9 At1g22330 RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 3 3 10 At1g22380 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 3 11 At1g22590 MADS-box family protein similar to putative DNA-binding protein GI:6714399 from [Arabidopsis thaliana]; MADS-box protein AGL87 3 3 3 12 At1g22630 expressed protein contains Pfam PF00684 : DnaJ central domain (4 repeats) 3 3 3 13 At1g22780 "40S ribosomal protein S18 (RPS18A) Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A. thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and gb|R30430 come from this gene" 3 3 3 14 At1g22850 expressed protein 3 3 3 15 At1g26390 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 3 3 16 At1g26450 "beta-1,3-glucanase-related similar to beta-1,3-glucanase GI:15150341 from [Camellia sinensis]; C-terminal homology only" 3 3 3 17 At1g26640 aspartate/glutamate/uridylate kinase family protein contains Pfam amino acid kinase family PF00696 3 3 3 18 At1g26670 vesical transport v-SNARE 12 (VTI12) / vesicle soluble NSF attachment protein receptor VTI1b (VTI1B) receptor VTI1b identical to SP|Q9SEL5 Vesicle transport v-SNARE 12 (AtVTI12) (Vesicle transport v-SNARE protein VTI1b) (Vesicle soluble NSF attachment protein receptor VTI1b) (AtVTI1b) {Arabidopsis thaliana} 3 3 3 19 At1g26810 galactosyltransferase family protein contains Pfam profile: PF01762 galactosyltransferase 3 3 3 20 At1g26870 "no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to GB:AAD22369, NAM stands for No Apicla Meristem" 3 3 3 21 At1g27070 "5'-AMP-activated protein kinase-related contains weak similarity to Swiss-Prot:Q9QZH4 5'-AMP-activated protein kinase, beta-2 subunit (AMPK beta-2 chain) [Rattus norvegicus]" 3 3 3 22 At1g27130 "glutathione S-transferase, putative similar to glutathione S-transferase GB: AAF22517 GI:6652870 from [Papaver somniferum]" 3 3 3 23 At1g29980 "expressed protein contains Pfam profile PF04862: Protein of unknown function, DUF642" 3 3 3 24 At1g30040 gibberellin 2-oxidase / GA2-oxidase (GA2OX2) identical to GI:4678368 ga2ox2 3 3 3 25 At1g30210 "TCP family transcription factor, putative similar to TFPD (GI:6681577) [Arabidopsis thaliana]; contains similarity to cyc1A protein GI:6358548 from [Antirrhinum graniticum]" 3 3 4 1 At1g30270 CBL-interacting protein kinase 23 (CIPK23) identical to CBL-interacting protein kinase 23 [Arabidopsis thaliana] gi|14486386|gb|AAK61494 3 3 4 2 At1g30480 "DNA-damage-repair/toleration protein, chloroplast (DRT111) nearly identical to SP|P42698 DNA-damage-repair/toleration protein DRT111, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profiles PF01585: G-patch domain, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" 3 3 4 3 At1g30510 "ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751" 3 3 4 4 At1g30680 toprim domain-containing protein contains Pfam profile: PF01751 toprim domain 3 3 4 5 At1g30740 FAD-binding domain-containing protein similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) [Eschscholzia californica]; contains PF01565 FAD binding domain 3 3 4 6 At1g33770 "protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain" 3 3 4 7 At1g33820 hypothetical protein 3 3 4 8 At1g34000 light stress-responsive one-helix protein (OHP2) contains similarity to photosystem II 22 kDa protein GI:6006279 from [Arabidopsis thaliana] 3 3 4 9 At1g34040 "alliinase family protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain" 3 3 4 10 At1g34220 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 3 4 11 At1g34300 "lectin protein kinase family protein contains Pfam domains, PF01453: Lectin (probable mannose binding) and PF00069: Protein kinase domain" 3 3 4 12 At1g34470 permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007 3 3 4 13 At1g34540 cytochrome P450 family protein similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450 3 3 4 14 At1g44770 expressed protein 3 3 4 15 At1g44830 "AP2 domain-containing transcription factor TINY, putative contains AP2 domain; similar to TINY (GP:1246403) [Arabidopsis thaliana]" 3 3 4 16 At1g45015 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein contains Pfam profile PF02221: ML domain 3 3 4 17 At1g45130 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase [Lycopersicon esculentum] GI:7939619, beta-galactosidase BG1 GI:15081596 from [Vitis vinifera]; contains Pfam profile PF01301: Glycosyl hydrolases family 35" 3 3 4 18 At1g45403 membrane protein 3 3 4 19 At1g45688 expressed protein 3 3 4 20 At1g47230 "cyclin, putative similar to cyclin A-like protein [Nicotiana tabacum] GI:1064931, A-type cyclin [Catharanthus roseus] GI:2190259; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain" 3 3 4 21 At1g47290 "3-beta hydroxysteroid dehydrogenase/isomerase family protein contains Pfam profile PF01073 3-beta hydroxysteroid dehydrogenase/isomerase domain; similar to NAD(P)-dependent steroid dehydrogenase from Homo sapiens [SP|Q15738], Mus musculus [SP|Q9R1J0]" 3 3 4 22 At1g50230 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 3 4 23 At1g50290 expressed protein 3 3 4 24 At1g50480 formate--tetrahydrofolate ligase / 10-formyltetrahydrofolate synthetase (THFS) identical to 10-formyltetrahydrofolate synthetase (Arabidopsis thaliana) GI:5921663 3 3 4 25 At1g50560 "cytochrome P450, putative similar to CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]" 3 3 5 1 At1g50730 expressed protein 3 3 5 2 At1g50790 hypothetical protein 3 3 5 3 At1g51000 expressed protein ; expression supported by MPSS 3 3 5 4 At1g51070 basic helix-loop-helix (bHLH) family protein similar to bHLH transcription factor GI:3757520 from [Arabidopsis thaliana] 3 3 5 5 At1g53705 hypothetical protein 3 3 5 6 At1g53770 expressed protein 3 3 5 7 At1g53930 ubiquitin family protein contains Pfam profile: PF00240 ubiquitin family 3 3 5 8 At1g53990 "GDSL-motif lipase/hydrolase family protein similar to myrosinase-associated proteins from [Brassica napus] GI:1769968 GI:1769970, SP|P40603 Anther-specific proline-rich protein APG {Brassica napus}; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 3 5 9 At1g54110 "cation exchanger, putative (CAX10) Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563" 3 3 5 10 At1g54160 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 3 3 5 11 At1g54310 expressed protein 3 3 5 12 At1g54360 expressed protein 3 3 5 13 At1g58025 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487; contains prenyl group binding site (CAAX box) Prosite:PS00294" 3 3 5 14 At1g58090 F-box family protein contains F-box domain Pfam:PF00646 3 3 5 15 At1g58260 cytochrome P450 family protein similar to cytochrome P450 GI:984542 from [Sorghum bicolor] 3 3 5 16 At1g58290 "glutamyl-tRNA reductase 1 / GluTR (HEMA1) identical to glutamyl-tRNA reductase 1, chloroplast [SP|P42804]" 3 3 5 17 At1g58470 RNA-binding protein (XF41) identical to RNA binding protein GI:18181938 from (Arabidopsis thaliana); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) domain 15450911 gb AY054536.1 3 3 5 18 At1g58725 "GDSL-motif lipase, putative similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase" 3 3 5 19 At1g59550 UBX domain-containing protein contains Pfam profile PF00789: UBX domain 3 3 5 20 At1g59600 expressed protein similar to B-lymphocyte antigen precursor (B-lymphocyte surface antigen) (721P) (Protein XE7) (Swiss-Prot:Q02040) [Homo sapiens]; supporting cDNA gi|6520226|dbj|AB028230.1| 3 3 5 21 At1g62530 hypothetical protein 3 3 5 22 At1g62600 flavin-containing monooxygenase family protein / FMO family protein low similarity to flavin-containing monooxygenase 2 from Cavia porcellus [SP|P36366]; contains Pfam profile PF00743 Flavin-binding monooxygenase-like 3 3 5 23 At1g62770 "invertase/pectin methylesterase inhibitor family protein similar to pectinesterase from Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum SP|Q43143, Phaseolus vulgaris SP|Q43111; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 3 3 5 24 At1g62800 "aspartate aminotransferase, cytoplasmic isozyme 2 / transaminase A (ASP4) identical to aspartate aminotransferase, cytoplasmic isozyme 2 SP:P46646 [Arabidopsis thaliana]" 3 3 5 25 At1g62950 "leucine-rich repeat transmembrane protein kinase, putative contains protein kinase domains" 3 3 6 1 At1g63000 expressed protein 3 3 6 2 At1g63150 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 6 3 At1g63205 hypothetical protein 3 3 6 4 At1g65950 "ABC1 family protein contains Pfam domain, PF03109: ABC1 family" 3 3 6 5 At1g66000 "expressed protein contains Pfam PF04510 : Family of unknown function (DUF577); common family comprised of At4g09440, At1g66000, At1g66060" 3 3 6 6 At1g66160 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain 3 3 6 7 At1g66210 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 3 3 6 8 At1g66370 myb family transcription factor (MYB113) contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 6 9 At1g66430 pfkB-type carbohydrate kinase family protein contains Pfam profile: PF00294 pfkB family carbohydrate kinase 3 3 6 10 At1g66590 cox19 family protein contains Pfam profile PF05490: Cox19 protein 3 3 6 11 At1g66650 "seven in absentia (SINA) protein, putative similar to SIAH2 protein [Brassica napus var. napus] GI:7657878; contains Pfam profile PF03145: Seven in absentia protein family" 3 3 6 12 At1g69320 "CLE10, putative CLAVATA3/ESR-Related 10 (CLE10)" 3 3 6 13 At1g69370 "chorismate mutase, putative similar to gi:5732016 and SP|P42738; contains Pfam profile: PF01817: Chorismate mutase" 3 3 6 14 At1g69510 expressed protein 3 3 6 15 At1g69530 "expansin, putative (EXP1) identical to expansin (At-EXP1) [Arabidopsis thaliana] GI:1041702; alpha-expansin gene family, PMID:11641069" 3 3 6 16 At1g69710 "zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein [Arabidopsis thaliana] gi|15811367|gb|AAL08940" 3 3 6 17 At1g69770 "chromomethylase 3 (CMT3) nearly identical to chromomethylase CMT3 [Arabidopsis thaliana] GI:14583092, GI:14647157" 3 3 6 18 At1g69940 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 3 6 19 At1g70020 hypothetical protein 3 3 6 20 At1g72820 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier protein 3 3 6 21 At1g72860 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 6 22 At1g73040 "jacalin lectin family protein similar to jacalin Artocarpus heterophyllus GI:289160, SP|P18674 Agglutinin alpha chain (MPA) Maclura pomifera, SP|P18670 Agglutinin alpha chain (Jacalin alpha chain) Artocarpus integrifolia; contains Pfam profile PF01419 jacalin-like lectin domain" 3 3 6 23 At1g73110 "ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) [Oryza sativa] SWISS-PROT:P93431" 3 3 6 24 At1g73250 "GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1) identical to GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1)GI:6016479 from [Arabidopsis thaliana]" 3 3 6 25 At1g73310 serine carboxypeptidase S10 family protein similar to serine carboxypeptidase I precursor (SP:P07519) [Hordeum vulgare]; glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; contains Pfam profile: PF00450 Serine carboxypeptidase 3 3 7 1 At1g73470 expressed protein 3 3 7 2 At1g73540 "MutT/nudix family protein low similarity to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (EC 3.6.1.-) (Ap6A hydrolase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain" 3 3 7 3 AT5G57480 PC-1 C10 3 3 7 4 3XSSC PC-1 C22 3 3 7 5 AT1G29930 PC-1 G10 3 3 7 6 3XSSC PC-1 G22 3 3 7 7 AT3G44150 PC-1 K10 3 3 7 8 3XSSC PC-1 K22 3 3 7 9 AT4G00810 PC-1 O10 3 3 7 10 3XSSC PC-1 O22 3 3 7 11 At1g76380 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 3 3 7 12 At1g76405 expressed protein 3 3 7 13 At1g76540 "cell division control protein, putative similar to SWISS-PROT:Q38775, cell division control protein 2 homolog D [Antirrhinum majus]; contains protein kinase domain, Pfam:PF00069" 3 3 7 14 At1g76600 expressed protein 3 3 7 15 At1g76770 heat shock protein-related contains similarity to 17.9 kDa heat-shock protein [Helianthus annuus] gi|11990130|emb|CAB55634 3 3 7 16 At1g76825 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain 3 3 7 17 At1g76955 Expressed protein 3 3 7 18 At1g76990 ACT domain containing protein low similarity to uridylyltransferase SP|P56884 from Rhizobium meliloti; contains Pfam ACT domain PF01842 3 3 7 19 At1g79650 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain" 3 3 7 20 At1g79680 "wall-associated kinase, putative similar to wall-associated kinase 2 GI:4826399 from [Arabidopsis thaliana]" 3 3 7 21 At1g79820 "hexose transporter, putative similar to hexose transporter GI:8347246 from (Solanum tuberosum); contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 7 22 At1g79880 La domain-containing protein contains Pfam profile PF05383: La domain; similar to putative protein GB:CAA18589 [Arabidopsis thaliana] 3 3 7 23 At1g79990 "coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]; similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus musculus]" 3 3 7 24 At1g80040 expressed protein 3 3 7 25 At1g80220 hypothetical protein 3 3 8 1 At1g80270 "DNA-binding protein, putative similar to DNA-binding protein [Triticum aestivum] GI:6958202; contains Pfam profile: PF01535 PPR repeat" 3 3 8 2 At2g03130 ribosomal protein L12 family protein 3 3 8 3 At2g03190 "E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At16), putative E3 ubiquitin ligase; similar to Skp1 homolog Skp1a GI:3068807 from [Arabidopsis thaliana]" 3 3 8 4 At2g03370 hypothetical protein contains Pfam profile PF04577: Protein of unknown function (DUF563) 3 3 8 5 At2g03440 nodulin-related similar to Early nodulin 12B precursor (N-12B) (Swiss-Prot:Q40339) [Medicago sativa] 3 3 8 6 At2g03610 F-box family protein contains F-box domain Pfam:PF00646 3 3 8 7 At2g03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein contains Pfam profile PF05019: Coenzyme Q (ubiquinone) biosynthesis protein Coq4 3 3 8 8 At2g03870 "small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] SWISS-PROT:Q9UK45" 3 3 8 9 At2g03890 phosphatidylinositol 3- and 4-kinase family protein low similarity to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase 3 3 8 10 At2g07725 60S ribosomal protein L5 (RPL5) identical to SP|P42793 Mitochondrial 60S ribosomal protein L5 {Arabidopsis thaliana} 3 3 8 11 At2g07738 hypothetical protein 3 3 8 12 At2g09970 hypothetical protein 3 3 8 13 At2g10070 expressed protein very low similarity to AHM1 [Triticum aestivum] GI:6691467 3 3 8 14 At2g10550 hypothetical protein 3 3 8 15 At2g10850 hypothetical protein weak similarity to envelope-like [Glycine max] GI:3142379 3 3 8 16 At2g11270 "citrate synthase-related contains similarity to Swiss-Prot:P20115 citrate synthase, mitochondrial precursor [Arabidopsis thaliana]" 3 3 8 17 At2g11490 hypothetical protein 3 3 8 18 At2g16370 bifunctional dihydrofolate reductase-thymidylate synthase 1 / DHFR-TS (THY-1) identical to GP:289193:L08593 [SP|Q05762] 3 3 8 19 At2g16410 hypothetical protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 3 3 8 20 At2g16580 "auxin-responsive protein, putative similar to auxin-induced protein TGSAUR21 (GI:10185818) [Tulipa gesneriana]" 3 3 8 21 At2g16640 "chloroplast outer membrane protein, putative similar to chloroplast protein import component Toc159 [Pisum sativum] GI:8489806, chloroplast outer envelope protein 86 [Pisum sativum] GI:599958, GTP-binding protein [Pisum sativum] GI:576509" 3 3 8 22 At2g16850 "plasma membrane intrinsic protein, putative very strong similarity to plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana] GI:2306917" 3 3 8 23 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 8 24 At2g17033 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 8 25 At2g17070 expressed protein contains Pfam profile PF03087: Arabidopsis protein of unknown function; expression supported by MPSS 3 3 9 1 At2g19920 "RNA-dependent RNA polymerase family protein contains Pfam domain, PF05183: RNA dependent RNA polymerase" 3 3 9 2 At2g19960 hAT dimerisation domain-containing protein / transposase-related very low similarity to transposase [Ipomoea purpurea] AB004906 GI:4063770; contains Pfam profile PF05699: hAT family dimerisation domain 3 3 9 3 At2g20130 "expressed protein contains Pfam domain, PF04367: Protein of unknown function (DUF502)" 3 3 9 4 At2g20170 hypothetical protein and grail contains Pfam profile PF03080: Arabidopsis proteins of unknown function 3 3 9 5 At2g20370 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 3 9 6 At2g20430 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain 3 3 9 7 At2g20585 expressed protein 3 3 9 8 At2g20610 "aminotransferase, putative similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II" 3 3 9 9 At2g23250 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains similarity to glucosyltransferases 3 3 9 10 At2g23310 RER1C protein identical to SP|Q9ZWI7 RER1C protein (AtRER1C) {Arabidopsis thaliana} 3 3 9 11 At2g23510 "transferase family protein low similarity to EIG-I24 from Nicotiana tabacum [gi:10798748], 10-deacetylbaccatin III-10-O-acetyl transferase from Taxus cuspidata [gi:6746554]; contains Pfam transferase family domain PF02458" 3 3 9 12 At2g23550 "hydrolase, alpha/beta fold family protein similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 9 13 At2g23750 SET domain-containing protein similar to SP|O60016 Cryptic loci regulator 4 (Histone-lysine N-methyltransferase) {Schizosaccharomyces pombe}; contains Pfam profile PF00856: SET domain 3 3 9 14 At2g23800 "geranylgeranyl pyrophosphate synthase (GGPS2) (GGPS5) / GGPP synthetase / farnesyltranstransferase identical to GB:U44876; sequence disagrees at N-Terminus, sequence submitted has been confirmed from three electropherograms." 3 3 9 15 At2g23985 expressed protein 3 3 9 16 At2g24020 "expressed protein contains Pfam domain PF02575: Uncharacterized BCR, YbaB family COG0718" 3 3 9 17 At2g26860 F-box family protein contains F-box domain Pfam:PF00646 3 3 9 18 At2g26920 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain 3 3 9 19 At2g27050 ethylene-insensitive3-like1 (EIL1) identical to ethylene-insensitive3-like1 GI:2224927 from [Arabidopsis thaliana] 3 3 9 20 At2g27090 "expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630)" 3 3 9 21 At2g27250 CLAVATA3 CLAVATA3/ESR-Related (CLE) family of proteins; ligand for CLV1; responsible for negative regulation of meristem cell differention and replacement 3 3 9 22 At2g27300 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; 3 3 9 23 At2g27440 "rac GTPase activating protein, putative similar to rac GTPase activating protein 3 [Lotus japonicus] GI:3695063; contains Pfam profiles PF00620: RhoGAP domain, PF00786: P21-Rho-binding domain" 3 3 9 24 At2g27480 calcium-binding EF hand family protein similar to SP|P12815 Programmed cell death protein 6 (Probable calcium-binding protein ALG-2) {Mus musculus}; contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 3 9 25 At2g30240 "cation/hydrogen exchanger, putative (CHX13) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563" 3 3 10 1 At2g30300 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 3 3 10 2 At2g30460 expressed protein contains 4 predicted transmembrane domains; similar to c_pp004044298r (GI:14597790) [Physcomitrella patens] 3 3 10 3 At2g30500 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] 3 3 10 4 At2g30630 expressed protein similar to H1-1flk [Arabidopsis thaliana] GI:388260 3 3 10 5 At2g30695 expressed protein 3 3 10 6 At2g30860 "glutathione S-transferase, putative identical to GB:Y12295" 3 3 10 7 At2g30920 hexaprenyldihydroxybenzoate methyltransferase identical to hexaprenyldihydroxybenzoate methyltransferase SP:O49354 from [Arabidopsis thaliana] 3 3 10 8 At2g33500 zinc finger (B-box type) family protein 3 3 10 9 At2g33540 CTD phosphatase-like protein 3 (CPL3) identical to CTD phosphatase-like 3 (CPL3) [Arabidopsis thaliana] GI:22212705; contains Pfam profile PF03031: NLI interacting factor 3 3 10 10 At2g33710 AP2 domain-containing transcription factor family protein similar to RAP2.6 (GI:17065542) {Arabidopsis thaliana} 3 3 10 11 At2g33740 copper-binding protein (CUTA) identical to copper-binding protein CUTA GI:12963361 from [Arabidopsis thaliana]; contains Pfam profile: PF03091 CutA1 divalent ion tolerance protein 3 3 10 12 At2g33840 tRNA synthetase class I (W and Y) family protein similar to SP|P54577 Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosyl--tRNA ligase) (TyrRS) {Homo sapiens}; contains Pfam profile PF00579: tRNA synthetases class I (W and Y) 3 3 10 13 At2g33880 expressed protein 3 3 10 14 At2g34110 hypothetical protein 3 3 10 15 At2g34180 CBL-interacting protein kinase 13 (CIPK13) identical to CBL-interacting protein kinase 13 [Arabidopsis thaliana] gi|13249125|gb|AAK16688 3 3 10 16 At2g36770 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 10 17 At2g36830 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 3 10 18 At2g36970 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 10 19 At2g37020 translin family protein similar to SP|Q62348 Translin {Mus musculus}; contains Pfam profile PF01997: Translin family 3 3 10 20 At2g37150 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 10 21 At2g37195 expressed protein 3 3 10 22 At2g37360 ABC transporter family protein 3 3 10 23 At2g37410 mitochondrial import inner membrane translocase (TIM17) nearly identical to SP|Q9SP35 Mitochondrial import inner membrane translocase subunit TIM17 {Arabidopsis thaliana} 3 3 10 24 At2g40020 expressed protein 3 3 10 25 At2g40060 expressed protein 3 3 11 1 At2g40160 expressed protein 3 3 11 2 At2g40210 MADS-box family protein contains Pfam profile: PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 3 3 11 3 At2g40380 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1) 3 3 11 4 At2g40410 "Ca(2+)-dependent nuclease, putative similar to Ca(2+)-dependent nuclease [Arabidopsis thaliana] GI:7684292" 3 3 11 5 At2g40570 initiator tRNA phosphoribosyl transferase family protein contains Pfam profile: PF04179 initiator tRNA phosphoribosyl transferase 3 3 11 6 At2g40630 expressed protein 3 3 11 7 At2g43180 expressed protein 3 3 11 8 At2g43210 UBX domain-containing protein contains Pfam profile PF00789: UBX domain 3 3 11 9 At2g43400 electron transfer flavoprotein-ubiquinone oxidoreductase family protein contains Pfam profile: PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase 3 3 11 10 At2g43450 expressed protein ; expression supported by MPSS 3 3 11 11 At2g43620 "chitinase, putative similar to basic endochitinase CHB4 precursor SP:Q06209 from [Brassica napus]" 3 3 11 12 At2g43660 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]; C terminal homology only" 3 3 11 13 At2g43820 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 11 14 At2g43880 "polygalacturonase, putative / pectinase, putative similar to polygalacturonase 4 [Lycopersicon esculentum] GI:2459815; contains Pfam profile PF00295: Glycosyl hydrolases family 28 (polygalacturonases)" 3 3 11 15 At2g46505 expressed protein 3 3 11 16 At2g46550 expressed protein 3 3 11 17 At2g46720 "fatty acid elongase 3-ketoacyl-CoA synthase, putative similar to GI:4091810; contains Pfam profile PF02797: Chalcone and stilbene synthases, C-terminal domain" 3 3 11 18 At2g46780 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 3 11 19 At2g46910 plastid-lipid associated protein PAP / fibrillin family protein contains Pfam profile PF04755: PAP_fibrillin 3 3 11 20 At2g46960 cytochrome P450 family protein similar to cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]; contains Pfam profile: PF00067: Cytochrome P450; supported by cDNA: gi_13605860_gb_AF367329.1_AF367329 3 3 11 21 At2g47120 short-chain dehydrogenase/reductase (SDR) family protein similar to 3-beta-hydroxysteroiddehydrogenase GI:15983819 from [Digitalis lanata] 3 3 11 22 At2g47180 "galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans]" 3 3 11 23 At3g02490 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 11 24 At3g02540 "ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain;" 3 3 11 25 At3g02680 hypothetical protein 3 3 12 1 At3g02740 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease 3 3 12 2 At3g02890 PHD finger protein-related contains low similarity to PHD-finger domain proteins 3 3 12 3 At3g02950 expressed protein 3 3 12 4 At3g03130 expressed protein ; expression supported by MPSS 3 3 12 5 At3g03190 "glutathione S-transferase, putative identical to glutathione S-transferase GB:AAB09584 from [Arabidopsis thaliana]" 3 3 12 6 At3g05740 DNA helicase (RECQI1) identical to DNA Helicase [Arabidopsis thaliana] GI:10944747 3 3 12 7 At3g05800 expressed protein 3 3 12 8 At3g05960 "sugar transporter, putative similar to hexose transporter GI:5734440 GB:CAB52689 [Lycopersicon esculentum], Sugar carrier protein C [Ricinus communis] SP|Q41144, monosaccharide transporter [Nicotiana tabacum] GI:19885; contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 12 9 At3g06010 "homeotic gene regulator, putative similar to SP|P25439 Homeotic gene regulator (Brahma protein) {Drosophila melanogaster}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain" 3 3 12 10 At3g06130 heavy-metal-associated domain-containing protein contains Pfam heavy metal associated domain PF00403 3 3 12 11 At3g06180 expressed protein 3 3 12 12 At3g06350 "dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative similar to dehydroquinate dehydratase/shikimate dehydrogenase [Nicotiana tabacum][GI:535771], dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Lycopersicon esculentum][GI:3169883]" 3 3 12 13 At3g06410 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 3 12 14 At3g09340 "amino acid transporter family protein low similarity to vesicular GABA transporter [Rattus norvegicus] GI:2587061; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II" 3 3 12 15 At3g09400 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain 3 3 12 16 At3g09570 expressed protein 3 3 12 17 At3g09640 L-ascorbate peroxidase 1b (APX1b) identical to ascorbate peroxidase [Arabidopsis thaliana] gi|555576|emb|CAA56340; 3 3 12 18 At3g09790 "polyubiquitin (UBQ8) identical to polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis thaliana] (Genetics 139 (2), 921-939 (1995))" 3 3 12 19 At3g09830 "protein kinase, putative similar to protein kinase [Lophopyrum elongatum] gi|13022177|gb|AAK11674" 3 3 12 20 At3g09990 "equilibrative nucleoside transporter, putative (ENT2) identical to putative equilibrative nucleoside transporter ENT2 [Arabidopsis thaliana] GI:16518991; contains similarity to SWISS-PROT:Q14542 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type, 36 kDa nucleolar protein HNP36, Hydrophobic nucleolar protein, 36 kDa, Delayed-early response protein 12) [Homo sapiens]; contains Pfam profile PF01733: Nucleoside transporter" 3 3 12 21 At3g10050 "threonine ammonia-lyase / threonine dehydratase / threonine deaminase (OMR1) identical to SP|Q9ZSS6 Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19, formerly EC 4.2.1.16) (Threonine deaminase) (TD) {Arabidopsis thaliana}" 3 3 12 22 At3g12430 expressed protein ; expression supported by MPSS 3 3 12 23 At3g12490 "cysteine protease inhibitor, putative / cystatin, putative similar to PRLI-interacting factor M [Arabidopsis thaliana] GI:11139270, cysteine proteinase inhibitor [Brassica rapa] GI:762785; contains Pfam profile PF00031: Cystatin domain" 3 3 12 24 At3g12660 fasciclin-like arabinogalactan family protein similar to fasciclin-like arabinogalactan-protein 1 [Arabidopsis thaliana] gi|13377776|gb|AAK20857; 3 3 12 25 At3g12700 "aspartyl protease family protein contains Pfam PF00026: Eukaryotic aspartyl protease; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]" 3 3 13 1 At3g12880 invertase/pectin methylesterase inhibitor family protein low similarity to SP|P83326 Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor 3 3 13 2 At3g12940 expressed protein 3 3 13 3 At3g13062 expressed protein weak similarity to SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP) {Homo sapiens} 3 3 13 4 At3g13090 "ABC transporter, putative similar to MRP-like ABC transporter [Arabidopsis thaliana] GI:2316016; contains Pfam profile: PF00005 ABC transporter" 3 3 13 5 At3g15430 regulator of chromosome condensation (RCC1) family protein low similarity to UVB-resistance protein UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam profile PF00415: Regulator of chromosome condensation (RCC1) 3 3 13 6 At3g15490 "expressed protein contains Pfam profile: PF03398 eukaryotic protein of unknown function, DUF292" 3 3 13 7 At3g15650 phospholipase/carboxylesterase family protein low similarity to lysophospholipase I [Mus musculus] GI:1864159; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family 3 3 13 8 At3g15690 "biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana]" 3 3 13 9 At3g15870 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from [Arabidopsis thaliana] 3 3 13 10 At3g15910 hypothetical protein 3 3 13 11 At3g16070 hypothetical protein 3 3 13 12 At3g16130 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) 3 3 13 13 At3g18780 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 3 3 13 14 At3g18820 "Ras-related GTP-binding protein, putative similar to Ras-related protein RAB7 GI:1370186 from [Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199 (1993); contains Pfam profile: PF00071 Ras family" 3 3 13 15 At3g18970 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 13 16 At3g19020 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 13 17 At3g19180 cell division protein-related weak similarity to cell division protein Ftn2 [Synechococcus sp. PCC 7942] GI:16226084 3 3 13 18 At3g19240 expressed protein 3 3 13 19 At3g19400 "cysteine proteinase, putative non-consensus AT acceptor site at exon 3; contains similarity to cysteine protease CYP1 GI:2828252, TDI-65 GI:5726641 from [Lycopersicon esculentum]" 3 3 13 20 At3g19460 reticulon family protein (RTNLB11) weak similarity to neuroendocrine-specific protein C [Homo sapiens] GI:307311; identical to cDNA RTNLB11 GI:32331878 3 3 13 21 At3g22180 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 3 3 13 22 At3g22231 expressed protein 3 3 13 23 At3g22410 expressed protein 3 3 13 24 At3g22425 imidazoleglycerol-phosphate dehydratase 1 (IGPD1) identical to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; supporting cDNA gi|437212|gb|U02689.1|ATU02689 3 3 13 25 At3g22550 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 14 1 At3g22620 "protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234" 3 3 14 2 At3g22800 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycsimilar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 14 3 At3g22850 "expressed protein similar to auxin down-regulated protein ARG10 [Vigna radiata] GI:2970051, wali7 (aluminum-induced protein) [Triticum aestivum] GI:451193" 3 3 14 4 At3g25750 F-box family protein contains F-box domain Pfam:PF00646 3 3 14 5 At3g25805 expressed protein 3 3 14 6 At3g25930 universal stress protein (USP) family protein contains Pfam PF00582: universal stress protein family 3 3 14 7 At3g25990 DNA-binding protein GT-1-related similar to GT-1 GI:598073 from [Arabidopsis thaliana] 3 3 14 8 At3g26125 "cytochrome P450, putative " 3 3 14 9 At3g26180 "cytochrome P450 71B20, putative (CYP71B2) identical to cytochrome P450 71B20 (SP:Q9LTM3) [Arabidopsis thaliana]; similar to cytochrome P450 GB:O65784 [Arabidopsis thaliana]" 3 3 14 10 At3g26340 "20S proteasome beta subunit E, putative very strong similarity to SP|O23717 Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) {Arabidopsis thaliana}" 3 3 14 11 At3g26400 "eukaryotic translation initiation factor 4B, putative/ eIF-4B, putative similar to eukaryotic initiation factor 4B [Arabidopsis thaliana] GI:6739518" 3 3 14 12 At3g29090 pectinesterase family protein similar to pectinesterase precursor GB:Q43043 [Petunia integrifolia]; contains Pfam profile: PF01095 pectinesterase 3 3 14 13 At3g29160 Snf1-related protein kinase (KIN11) identical to protein kinase AKin11 GI:1729444 from [Arabidopsis thaliana] 3 3 14 14 At3g29270 expressed protein 3 3 14 15 At3g29310 calmodulin-binding protein-related 3 3 14 16 At3g29470 hypothetical protein 3 3 14 17 At3g29600 hypothetical protein 3 3 14 18 At3g29765 hAT dimerisation domain-containing protein 3 3 14 19 At3g29791 expressed protein 3 3 14 20 At3g43890 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 3 14 21 At3g43950 hypothetical protein 3 3 14 22 At3g44120 F-box family protein contains Pfam:PF00646 F-box domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain ; contains TIGRFAM TIGR01640: F-box protein interaction domain 3 3 14 23 At3g44180 "syntaxin-related family protein contains a novel domain similar to F-box that is shared among other proteins in Arabidopsis; similar to proteins At3g54160, At1g47920 (syntaxin SYP81), At5g41830, At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis thaliana]" 3 3 14 24 At3g44360 "expressed protein predicted protein, Arabidopsis thaliana" 3 3 14 25 At3g44450 expressed protein 3 3 15 1 At3g44610 "protein kinase family protein similar to viroid symptom modulation protein (protein kinase)[Lycopersicon esculentum] gi|7672777|gb|AAF66637; contains protein kinase domain, Pfam:PF00069" 3 3 15 2 At3g44680 "histone deacetylase, putative similar to histone deacetylase-1 (HD-1) [Gallus gallus] GI:2791684; contains Pfam profile PF00850: Histone deacetylase family; identical to cDNA histone deacetylase partial cds GI:21637258" 3 3 15 3 At3g47520 "malate dehydrogenase [NAD], chloroplast (MDH) identical to chloroplast NAD-malate dehydrogenase [Arabidopsis thaliana] GI:3256066; contains InterPro entry IPR001236: Lactate/malate dehydrogenase; contains Pfam profiles PF00056: lactate/malate dehydrogenase, NAD binding domain and PF02866: lactate/malate dehydrogenase, alpha/beta C-terminal domain" 3 3 15 4 At3g47560 esterase/lipase/thioesterase family protein low similarity to cinnamoyl ester hydrolase CinI [Butyrivibrio fibrisolvens] GI:1622732; contains Interpro entry IPR000379 3 3 15 5 At3g47730 "ABC transporter family protein AbcA, Dictyostelium discoideum, DDU66526" 3 3 15 6 At3g47790 "ABC transporter family protein contains Pfam domain, PF00005: ABC transporter" 3 3 15 7 At3g47950 "ATPase, plasma membrane-type, putative / proton pump, putative strong similarity to P-type H(+)-transporting ATPase from Nicotiana plumbaginifolia [SP|Q08435, SP|Q08436], Lycopersicon esculentum [GI:5901757, SP|P22180], Solanum tuberosum [GI:435003]; contains InterPro accession IPR001757: ATPase, E1-E2 type" 3 3 15 8 At3g48010 "cyclic nucleotide-regulated ion channel, putative (CNGC16) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana]" 3 3 15 9 At3g48160 "transcription factor, putative / E2F-like repressor E2L3 (E2L3) identical to E2F-like repressor E2L3 [Arabidopsis thaliana] GI:20502508" 3 3 15 10 At3g48200 expressed protein 3 3 15 11 At3g51100 expressed protein 3 3 15 12 At3g51150 "kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain" 3 3 15 13 At3g51330 "aspartyl protease family protein contains Eukaryotic and viral aspartyl proteases active site, PROSITE:PS00141" 3 3 15 14 At3g51380 calmodulin-binding family protein 3 3 15 15 At3g51560 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 15 16 At3g51620 expressed protein 3 3 15 17 At3g51760 "hypothetical protein hypothetical protein F17M19.12 - Arabidopsis thaliana, EMBL:AC021665" 3 3 15 18 At3g51800 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 3 3 15 19 At3g54310 "hypothetical protein predicted protein, Arabidopsis thaliana" 3 3 15 20 At3g54360 "expressed protein DNA-binding Mel-18 protein, Homo sapiens, PIR:JN0717" 3 3 15 21 At3g54510 early-responsive to dehydration protein-related / ERD protein-related low similarity to ERD4 protein (early-responsive to dehydration stress) [Arabidopsis thaliana] GI:15375406; contains Pfam profile PF02714: Domain of unknown function DUF221 3 3 15 22 At3g54570 calmodulin-binding protein-related contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from [Solanum tuberosum] 3 3 15 23 At3g54750 expressed protein 3 3 15 24 At3g54810 "zinc finger (GATA type) family protein GATA transcription factor 3, Arabidopsis thaliana, Y13650" 3 3 15 25 At3g54940 "cysteine proteinase, putative contains similarity to cysteine proteinase GI:479060 from [Glycine max]" 3 3 16 1 At3g54970 expressed protein 3 3 16 2 At3g57800 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain; supported by full-length cDNA gi:20127059 3 3 16 3 At3g57840 self-incompatibility protein-related similar to S1 self-incompatibility protein [Papaver rhoeas] GI:452430 3 3 16 4 At3g58020 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain 3 3 16 5 At3g58080 hypothetical protein 3 3 16 6 At3g58270 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3 3 16 7 At3g58330 hypothetical protein 3 3 16 8 At3g58490 "phosphatidic acid phosphatase family protein / PAP2 family protein similar to sphingosine-1-phosphate phosphohydrolase from [Mus musculus] GI:9623190, [Homo sapiens] GI:23345324; contains Pfam profile PF01569: PAP2 superfamily" 3 3 16 9 At3g58550 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain 3 3 16 10 At3g61270 expressed protein 3 3 16 11 At3g61340 F-box family protein contains F-box domain Pfam:PF00646 3 3 16 12 At3g61490 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 3 3 16 13 At3g61540 "peptidase family protein similar to prolyl aminopeptidase (proline iminopeptidase) from Aeromonas sobria SP|P46547, Propionibacterium freudenreichii subsp. shermanii GI:2415704, Hafnia alvei GI:1754489" 3 3 16 14 At3g61710 autophagy protein Apg6 family contains weak similarity to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam profile PF04111: Autophagy protein Apg6 3 3 16 15 At3g61750 auxin-responsive protein -related similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana]; 3 3 16 16 At3g61900 auxin-responsive family protein similar to auxin-induced protein SAUR-AC1 (GI:546362) (PIR:T06084) [Arabidopsis thaliana] 3 3 16 17 At3g61950 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 3 16 18 At4g00900 "calcium-transporting ATPase 2, endoplasmic reticulum-type (ECA2) nearly identical to SP|O23087 Calcium-transporting ATPase 2, endoplasmic reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana}; contains InterPro Accession IPR006069: Cation transporting ATPase" 3 3 16 19 At4g00950 expressed protein 3 3 16 20 At4g01090 extra-large G-protein-related contains weak similarity to extra-large G-protein [Arabidopsis thaliana] gi|3201682|gb|AAC19353 3 3 16 21 At4g01150 expressed protein 3 3 16 22 At4g01290 expressed protein 3 3 16 23 At4g01360 expressed protein 3 3 16 24 At4g01520 no apical meristem (NAM) family protein similar to NAC1 (GI:7716952) {Medicago truncatula}; contains Pfam PF02365 : No apical meristem (NAM) protein 3 3 16 25 At4g01560 "brix domain-containing protein contains Pfam domain, PF04427: Brix domain" 3 3 17 1 At4g04398 hypothetical protein 3 3 17 2 At4g04460 "aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1" 3 3 17 3 At4g04650 hypothetical protein 3 3 17 4 At4g04710 "calcium-dependent protein kinase, putative / CDPK, putative similar to calcium-dependent protein kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048" 3 3 17 5 At4g04880 adenosine/AMP deaminase family protein low similarity to SP|P03958 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase) {Mus musculus}; contains Pfam profile PF00962: Adenosine/AMP deaminase 3 3 17 6 At4g04925 expressed protein 3 3 17 7 At4g05060 vesicle-associated membrane family protein / VAMP family protein similar to VAP27 GI:6688926 [Nicotiana plumbaginifolia] 3 3 17 8 At4g05110 "equilibrative nucleoside transporter, putative (ENT6) identical to putative equilibrative nucleoside transporter ENT6 [Arabidopsis thaliana] GI:16518997; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter" 3 3 17 9 At4g09830 expressed protein 3 3 17 10 At4g09890 expressed protein 3 3 17 11 At4g10030 "hydrolase, alpha/beta fold family protein contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 17 12 At4g10090 expressed protein 3 3 17 13 At4g10230 hypothetical protein 3 3 17 14 At4g10280 expressed protein 3 3 17 15 At4g10440 dehydration-responsive family protein similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 3 17 16 At4g10510 subtilase family protein contains similarity to subtilase; SP1 GI:9957714 from [Oryza sativa] 3 3 17 17 At4g13290 "cytochrome P450 71A19, putative (CYP71A19) Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis thaliana]; similar to cytochrome P450LIA1, Persea americana, M32885" 3 3 17 18 At4g13340 "leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965" 3 3 17 19 At4g13490 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 17 20 At4g13530 "expressed protein predicted protein, Arabidopsis thaliana" 3 3 17 21 At4g13700 serine/threonine protein phosphatase family protein contains Pfam domain PF00149: Ser/Thr protein phosphatase 3 3 17 22 At4g13740 expressed protein 3 3 17 23 At4g13870 Werner Syndrome-like exonuclease (WEX) contains Pfam profile PF01612: 3'-5' exonuclease; identical to Werner Syndrome-like exonuclease [Arabidopsis thaliana] GP:28195109 gb:AAO33765 3 3 17 24 At4g13930 "glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative similar to serine hydroxymethyltransferase [Chlamydomonas reinhardtii] GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase" 3 3 17 25 At4g16280 "flowering time control protein / FCA gamma (FCA) identical to SP|O04425 Flowering time control protein FCA {Arabidopsis thaliana}; four alternative splice variants, one splicing isoform contains a non-consensus CA donor splice site, based on cDNA: gi:2204090" 3 3 18 1 At4g16340 "adapter protein SPIKE1 (SPK1) One model reflects the alignment of a full-length cDNA sequence gi:18496702. There are multiple frame shifts in the gene model resulting in a truncated protein. The alternate model includes modifications in exons 14, 17 and 29 to compensate for frame shifts and maximize the protein length. It is not based on EST data. adapter protein SPIKE1 [Arabidopsis thaliana] GI:18496703" 3 3 18 2 At4g16490 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 3 3 18 3 At4g16520 "autophagy 8f (APG8f) identical to autophagy 8f [Arabidopsis thaliana] GI:19912161; contains Pfam profile PF02991: Microtubule associated protein 1A/1B, light chain 3" 3 3 18 4 At4g16680 "RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain" 3 3 18 5 At4g16710 glycosyltransferase family protein 28 low similarity to C terminus subunit of GlcA transferase from Escherichia coli [GI:2586169]; contains Pfam profile PF04101: Glycosyltransferase family 28 C-terminal domain 3 3 18 6 At4g16830 nuclear RNA-binding protein (RGGA) identical to nuclear RNA binding protein GI:6492264 from [Arabidopsis thaliana] 3 3 18 7 At4g16850 expressed protein 3 3 18 8 At4g19440 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 18 9 At4g19500 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. A false intron was added between exons 2 and 3 to circumvent a frameshift caused by a sequencing error, as per Blake Meyers (bcmeyers@vegmail.ucdavis.edu)" 3 3 18 10 At4g19650 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF 3 3 18 11 At4g19690 "iron-responsive transporter (IRT1) identical to Fe(II) transport protein [Arabidopsis thaliana] gi|1353266|gb|AAB01678; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 18 12 At4g19870 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 3 3 18 13 At4g19925 "disease resistance protein (TIR class), putative contains Pfam profile PF01582: TIR domain" 3 3 18 14 At4g20070 peptidase M20/M25/M40 family protein contains similarity to hydantoin utilization protein C [Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam profile PF01546: Peptidase family M20/M25/M40 3 3 18 15 At4g20130 "ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase-related contains weak similarity to Swiss-Prot:P94026 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (Ribulose- bisphosphate-carboxylase]-lysine N-methyltransferase, RuBisCO methyltransferase, RuBisco LSMT, rbcMT) [Nicotiana tabacum]" 3 3 18 16 At4g22910 "WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to fizzy-related protein (GI:5813825) Drosophila melanogaster, PID:g2326419;" 3 3 18 17 At4g22970 peptidase C50 family protein contains Pfam PF03568: Peptidase family C50 3 3 18 18 At4g23140 receptor-like protein kinase 5 (RLK5) identical to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam domain PF00069: Protein kinase domain; identical to cDNA receptor-like protein kinase 5 (RLK5) GI:13506746 3 3 18 19 At4g23200 protein kinase family protein contains Pfam PF00069: Protein kinase domain 3 3 18 20 At4g23340 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to gibberellin c20-oxidase [Pisum sativum] GI:6855711; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family" 3 3 18 21 At4g23400 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 3 3 18 22 At4g23540 "expressed protein probable membrane protein YPL012w, Saccharomyces cerevisiae, PIR2:S59681" 3 3 18 23 At4g23600 "coronatine-responsive tyrosine aminotransferase / tyrosine transaminase similar to nicotianamine aminotransferase from Hordeum vulgare [GI:6498122, GI:6469087]; contains Pfam profile PF00155 aminotransferase, classes I and II; identical to cDNA coronatine-regulated tyrosine aminotransferase (F9D16.70) GI:15076852" 3 3 18 24 At4g26160 thioredoxin family protein low similarity to thioredoxin [Ictalurus punctatus] GI:9837585; contains Pfam profile: PF00085 Thioredoxin 3 3 18 25 At4g26210 mitochondrial ATP synthase g subunit family protein contains Pfam profile: PF04718 mitochondrial ATP synthase g subunit 3 3 19 1 At4g26370 antitermination NusB domain-containing protein contains Pfam profile: PF01029 NusB family 3 3 19 2 At4g26410 expressed protein 3 3 19 3 At4g26560 "calcineurin B-like protein, putative similar to calcineurin B-like protein 3 [Arabidopsis thaliana] GI:3309086, calcineurin B-like protein 2 [Arabidopsis thaliana] GI:3309084; contains INTERPRO:IPR002048 calcium-binding EF-hand domain" 3 3 19 4 At4g26600 "nucleolar protein, putative similar to SP|P46087 Proliferating-cell nucleolar antigen p120 (Proliferation-associated nucleolar protein p120) {Homo sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun family" 3 3 19 5 At4g26750 hydroxyproline-rich glycoprotein family protein 3 3 19 6 At4g26810 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex 3 3 19 7 At4g29390 "40S ribosomal protein S30 (RPS30B) RIBOSOMAL PROTEIN S30 - Arabidopsis thaliana,PID:e1358183" 3 3 19 8 At4g29450 "leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069" 3 3 19 9 At4g29630 "cytidine deaminase, putative / cytidine aminohydrolase, putative identical to cytidine deaminase 3 (CDA3) [Arabidopsis thaliana] GI:3818577, cytidine deaminase homolog DesF [Arabidopsis thaliana] GI:4836448; similar to cytidine deaminase (CDD) [Arabidopsis thaliana] GI:3046700; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding" 3 3 19 10 At4g29670 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin 3 3 19 11 At4g29830 "transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); G protein beta subunit-like protein, Schistosoma mansoni, gb:U30261" 3 3 19 12 At4g29870 "expressed protein predicted protein, Arabidopsis thaliana, PIR2:T01282" 3 3 19 13 At4g30040 "aspartyl protease family contains Pfam domain, PF00026: eukaryotic aspartyl protease" 3 3 19 14 At4g30100 "tRNA-splicing endonuclease positive effector-related contains similarity to SEN1, a positive effector of tRNA-splicing endonuclease [Saccharomyces cerevisiae] gi|172574|gb|AAB63976" 3 3 19 15 At4g32580 thioredoxin family protein contains Pfam profile: PF00085 Thioredoxin 3 3 19 16 At4g32620 "expressed protein predicted protein T10M13.8, Arabidopsis thaliana" 3 3 19 17 At4g32800 "AP2 domain-containing transcription factor TINY, putative similar to transcription factor TINY - Arabidopsis thaliana, PIR2:T01076" 3 3 19 18 At4g32850 "nucleotidyltransferase family protein contains Pfam profiles: PF01909 nucleotidyltransferase domain, PF04926 poly(A) polymerase predicted RNA binding domain" 3 3 19 19 At4g32970 expressed protein low similarity to SP|Q13061 Triadin {Homo sapiens} 3 3 19 20 At4g33020 "metal transporter, putative (ZIP9) identical to putative metal transporter ZIP9 [Arabidopsis thaliana] gi|17385790|gb|AAL38435; similar to Zn and Cd transporter ZNT1 [Thlaspi caerulescens] gi|7381054|gb|AAF61374; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563" 3 3 19 21 At4g33180 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas fluorescens] GI:1871461; contains Pfam profile PF00561: alpha/beta hydrolase fold" 3 3 19 22 At4g33250 eukaryotic translation initiation factor 3 subunit 11 / eIF-3 p25 / eIF3k (TIF3K1) identical to Swiss-Prot:Q9SZA3 eukaryotic translation initiation factor 3 subunit 11 (eIF-3 p25) (eIF3k) [Arabidopsis thaliana]; identical to cDNA initiation factor 3k GI:12407752 3 3 19 23 AT5G57480 PC-1 C10 3 3 19 24 3XSSC PC-1 C22 3 3 19 25 AT1G29930 PC-1 G10 3 3 20 1 3XSSC PC-1 G22 3 3 20 2 AT3G44150 PC-1 K10 3 3 20 3 3XSSC PC-1 K22 3 3 20 4 AT4G00810 PC-1 O10 3 3 20 5 3XSSC PC-1 O22 3 3 20 6 At4g35810 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715], Homo sapiens [GI:18073925]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 3 3 20 7 At4g35870 expressed protein 3 3 20 8 At4g36020 "cold-shock DNA-binding family protein contains Pfam domains, PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle" 3 3 20 9 At4g36060 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 3 20 10 At4g36210 expressed protein contains Pfam PF05277: Protein of unknown function (DUF726) 3 3 20 11 At4g36260 "zinc finger protein-related similar to lateral root primordium 1 (LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam profile PF05142: Domain of unknown function (DUF702), TIGR01624: LRP1 C-terminal domain, TIGR01623: putative zinc finger domain, LRP1 type" 3 3 20 12 At4g36450 "mitogen-activated protein kinase, putative / MAPK, putative (MPK14) mitogen-activated protein kinase (MAPK)(AtMPK14), PMID:12119167" 3 3 20 13 At4g36510 hypothetical protein 3 3 20 14 At4g39160 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 20 15 At4g39220 RER1A protein identical to SP|O48670 RER1A protein (AtRER1A) {Arabidopsis thaliana} 3 3 20 16 At4g39320 microtubule-associated protein-related contains weak similarity to microtubule-associated protein 1B (MAP 1B) (Swiss-Prot:P46821) [Homo sapiens] 3 3 20 17 At4g39370 "ubiquitin-specific protease 27, putative (UBP27) similar to GI:11993494; ubiquitin specific protease 66 - Gallus gallus,PID:g3800764" 3 3 20 18 At4g39530 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 20 19 At4g39560 kelch repeat-containing F-box family protein contains Pfam PF00646: F-box domain; contains Pfam PF01344 : Kelch motif; contains Prosite PS00018: EF-hand calcium-binding domain 3 3 20 20 At4g39730 "lipid-associated family protein contains PLAT/LH2 (Polycystin-1, Lipoxygenase, Alpha-Toxin/Lipoxygenase homology) domain Pfam:PF01477" 3 3 20 21 At4g39760 kelch repeat-containing F-box family protein contains F-box domain Pfam:PF00646 and Kelch motif Pfam:PF01344 3 3 20 22 At5g03300 adenosine kinase 2 (ADK2) contains Pfam profile: PF00294 pfkB family carbohydrate kinase; identical to cDNA adenosine kinase 2 (ADK2) GI:12017763 3 3 20 23 At5g03350 "legume lectin family protein contains Pfam domain, PF00139: Legume lectins beta domain" 3 3 20 24 At5g03490 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 3 20 25 At5g03545 "expressed protein No ATG start, annotated according to PMID:11123795" 3 3 21 1 At5g03710 hypothetical protein 3 3 21 2 At5g03770 "3-deoxy-D-manno-octulosonic acid transferase-related similar to 3-deoxy-D-manno-octulosonic acid transferase, Escherichia coli, PIR:JU0467; contains Pfam profile PF04413: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)" 3 3 21 3 At5g03940 "signal recognition particle 54 kDa protein, chloroplast / 54 chloroplast protein / SRP54 (FFC) identical to Swiss-Prot:P37107 signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) [Arabidopsis thaliana]" 3 3 21 4 At5g04000 expressed protein 3 3 21 5 At5g06580 "FAD linked oxidase family protein similar to SP|Q12627 from Kluyveromyces lactis and SP|P32891 from Saccharomyces cerevisiae; contains Pfam FAD linked oxidases, C-terminal domain PF02913, Pfam FAD binding domain PF01565" 3 3 21 6 At5g06640 "proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965" 3 3 21 7 At5g06805 reverse transcriptase-related low similarity to reverse transcriptase [Arabidopsis thaliana] GI:976278 3 3 21 8 At5g06860 "polygalacturonase inhibiting protein 1 (PGIP1) identical to polygalacturonase inhibiting protein 1 (PGIP1) [Arabidopsis thaliana] gi|7800199|gb|AAF69827; contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611" 3 3 21 9 At5g07020 proline-rich family protein 3 3 21 10 At5g07080 "transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase - Taxus cuspidata, AF193765, EMBL:AF193765; contains Pfam transferase family domain PF00248" 3 3 21 11 At5g07230 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein identical to tapetum-specific protein A9 [Precursor] SP| Q00762; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 3 21 12 At5g07290 "RNA recognition motif (RRM)-containing protein Mei2-like protein - Arabidopsis thaliana, EMBL:D86122" 3 3 21 13 At5g10380 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 3 21 14 At5g10440 "cyclin family protein similar to cyclin D2.1 protein [Nicotiana tabacum] GI:4160298; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 3 21 15 At5g10600 "cytochrome P450 family protein similar to Cytochrome P450 91A1 (SP:Q9FG65) {Arabidopsis thaliana} ; cytochrome P450, Helianthus tuberosus, EMBL:HTCYP81L" 3 3 21 16 At5g10660 calmodulin-binding protein-related contains weak similarity to calmodulin-binding proteins 3 3 21 17 At5g10800 "RNA recognition motif (RRM)-containing protein KIAA0332 gene, Homo sapiens, EMBL:HSAB2330" 3 3 21 18 At5g10860 CBS domain-containing protein contains Pfam profile PF00571: CBS domain 3 3 21 19 At5g11020 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 3 21 20 At5g11080 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 3 21 21 At5g14220 "protoporphyrinogen oxidase, putative similar to protoporphyrinogen IX oxidase, mitochondrial (PPO II) from Nicotiana tabacum [SP|O24164], Glycine max, AB025102, Spinacia oleracea [GI:14349153]; contains Pfam amine oxidase, flavin-containing domain [PF015930]" 3 3 21 22 At5g14270 "DNA-binding bromodomain-containing protein contains bromodomain, INTERPRO:IPR001487" 3 3 21 23 At5g14450 "GDSL-motif lipase/hydrolase family protein similar to early nodulin ENOD8 [Medicago sativa] GI:304037, elicitor-induced glycoprotein iEP4 [Daucus carota] GI:1911765, pollen-expressed coil protein [Medicago sativa] GI:1110502; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family" 3 3 21 24 At5g14510 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat 3 3 21 25 At5g14660 "peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B) identical to SP|Q9FUZ2 Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi|11320965|gb|AF269165.1|AF269165" 3 3 22 1 At5g14720 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 3 22 2 At5g14900 helicase associated (HA2) domain-containing protein similar to SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43 (Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam profile PF04408: Helicase associated domain (HA2) 3 3 22 3 At5g14950 glycosyl hydrolase family 38 protein similar to alpha-mannosidase II SP:P27046 from [Mus musculus] 3 3 22 4 At5g17630 "glucose-6-phosphate/phosphate translocator, putative similar to glucose-6-phosphate/phosphate-translocator precursor [Solanum tuberosum] gi|2997593|gb|AAC08526" 3 3 22 5 At5g17690 like heterochromatin protein (LHP1) identical to like heterochromatin protein LHP1 [Arabidopsis thaliana] GI:15625407; contains Pfam profile PF00385: 'chromo' (CHRromatin Organization MOdifier) 3 3 22 6 At5g17830 "hypothetical protein contains Pfam domain, PF04515: Protein of unknown function, DUF580" 3 3 22 7 At5g17890 "LIM domain-containing protein / disease resistance protein-related low similarity to disease resistance protein RPP4 [Arabidopsis thaliana] GI:20270890; contains Pfam profiles PF00412: LIM domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat" 3 3 22 8 At5g18070 "phosphoglucosamine mutase-related similar to SP|Q9P4V2 Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) {Candida albicans}; contains Pfam profiles PF00408: Phosphoglucomutase/phosphomannomutase C-terminal domain, PF02878: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I" 3 3 22 9 At5g18130 expressed protein similar to unknown protein (gb|AAF00631.1) 3 3 22 10 At5g18270 no apical meristem (NAM) family protein contains Pfam PF02365 : No apical meristem (NAM) protein; similar to cup-shaped cotyledon CUC2 (GI:1944132) [Arabidopsis thaliana] 3 3 22 11 At5g18310 "expressed protein predicted proteins, Drosophila melanogaster" 3 3 22 12 At5g20920 "eukaryotic translation initiation factor 2 subunit 2, putative / eIF-2-beta, putative similar to SP|P41035 Eukaryotic translation initiation factor 2 subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains Pfam profile PF01873: Domain found in IF2B/IF5" 3 3 22 13 At5g20960 aldehyde oxidase 1 (AAO1) identical to aldehyde oxidase AAO1 from Arabidopsis thaliana [gi:3172023] isoform contains a GA-donor splice site at intron 10 3 3 22 14 At5g21120 ethylene-insensitive3-like2 (EIL2) identical to ethylene-insensitive3-like2 (EIL2) GI:2224929 from [Arabidopsis thaliana] 3 3 22 15 At5g21170 "5'-AMP-activated protein kinase beta-2 subunit, putative similar to Swiss-Prot:Q9QZH4 5'-AMP-activated protein kinase, beta-2 subunit (AMPK beta-2 chain) [Rattus norvegicus]" 3 3 22 16 At5g22010 "AAA-type ATPase family protein / BRCT domain-containing protein contains Pfam profiles: PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase family associated with various cellular activities (AAA)" 3 3 22 17 At5g22050 "protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719" 3 3 22 18 At5g22200 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein similar to harpin-induced protein hin1 ( GI:1619321) [Nicotiana tabacum] 3 3 22 19 At5g22260 "male sterility 1 protein, putative (MS1) identical to male sterility 1 protein [Arabidopsis thaliana] gi|15554513|emb|CAC69663 PMID:11696184; contains Pfam profile PF00628: PHD-finger; identical to cDNA male sterility 1 protein (ms1 gene) GI:15554514" 3 3 22 20 At5g24890 expressed protein weak similarity to MTD1 [Medicago truncatula] GI:9294810 3 3 22 21 At5g24950 "cytochrome P450 71A15, putative (CYP71A15) identical to Cytochrome P450 71A15 (SP:P58046). [Arabidopsis thaliana]; cytochrome P-450LIA1 - Persea americana (avocado), EMBL:M32885" 3 3 22 22 At5g25130 "cytochrome P450 family protein CYTOCHROME P450 71B1 - Thlaspi arvense, EMBL:L24438" 3 3 22 23 At5g25190 "ethylene-responsive element-binding protein, putative ethylene responsive element binding protein homolog, Stylosanthes hamata, EMBL:U91857" 3 3 22 24 At5g25350 F-box family protein contains Pfam PF00646: F-box domain and Pfam PF00560: Leucine Rich Repeat (6 copies); similar to F-box protein FBL6 (GI:4432860) [Homo sapiens] 3 3 22 25 At5g25390 "AP2 domain-containing transcription factor, putative AP2 domain containing protein RAP2.4 [Arabidopsis thaliana] EMBL:AF003097" 3 3 23 1 At5g25510 "serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 kDa regulatory subunit, delta isoform (PP2A, B subunit, B' delta isoform, PP2A, B subunit, B56 delta isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta isoform, PP2A, B subunit, B'-gamma) [Oryctolagus cuniculus]; contains Pfam domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family)" 3 3 23 2 At5g25550 leucine-rich repeat family protein / extensin family protein similar to leucine-rich repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]; contains Pfam PF00560: Leucine Rich Repeat domains 3 3 23 3 At5g28560 hypothetical protein 3 3 23 4 At5g28620 protein kinase C-related contains weak similarity to protein kinase C beta [Homo sapiens] gi|633224|emb|CAA44393 3 3 23 5 At5g28785 hypothetical protein 3 3 23 6 At5g28830 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain 3 3 23 7 At5g29000 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 23 8 At5g29560 Ca+2-binding EF hand family protein contains similarity to Ca+2-binding EF hand protein GI:2270994 from [Glycine max] 3 3 23 9 At5g31787 hypothetical protein 3 3 23 10 At5g32410 hypothetical protein 3 3 23 11 At5g37570 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 23 12 At5g37630 "chromosome condensation family protein contains pfam profile: PF04154 chromosome condensation protein 3, C-terminal region" 3 3 23 13 At5g37820 major intrinsic family protein / MIP family protein contains Pfam profile: PF00230 major intrinsic protein (MIP) 3 3 23 14 At5g37880 "hypothetical protein predicted protein, Arabidopsis thaliana" 3 3 23 15 At5g38050 hypothetical protein 3 3 23 16 At5g38110 "ASF1-like anti-silencing family protein similar to SP|P32447 Anti-silencing protein 1 {Saccharomyces cerevisiae}; contains Pfam profile PF04729: Anti-silencing protein, ASF1-like" 3 3 23 17 At5g38280 serine/threonine protein kinase (PR5K) identical to receptor serine/threonine kinase PR5K gi|1235680|gb|AAC49208 3 3 23 18 At5g38340 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 23 19 At5g41170 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 3 23 20 At5g41240 "glutathione S-transferase, putative similar to glutathione S-transferase, GST 10b GB:CAA10662 [Arabidopsis thaliana] 37349." 3 3 23 21 At5g41410 homeodomain protein (BEL1) identical to cDNA homeobox protein (BEL1) GI:28202124 3 3 23 22 At5g41480 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS1) nearly identical to GI:17976703; identical to cDNA dihydrofolate synthetase/folylpolyglutamate synthetase (dhfs/fpgs1 gene) GI:17976702 3 3 23 23 At5g41650 lactoylglutathione lyase family protein / glyoxalase I family protein contains Pfam profile PF00903: glyoxalase family protein 3 3 23 24 At5g41690 "polyadenylate-binding protein, putative / PABP, putative similar to poly(A)-binding protein GI:7673355 from [Nicotiana tabacum]; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 3 3 23 25 At5g41840 F-box family protein contains F-box domain Pfam:PF00646 3 3 24 1 At5g41900 "hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas putida] GI:2822275; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 3 24 2 At5g44550 integral membrane family protein similar to unknown protein (pir||T10581) This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices; contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains Pfam PF04535 : Domain of unknown function (DUF588) 3 3 24 3 At5g44590 hypothetical protein 3 3 24 4 At5g44730 haloacid dehalogenase-like hydrolase family protein low similarity to SP|Q94915 Rhythmically expressed gene 2 protein (DREG-2) {Drosophila melanogaster}; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase 3 3 24 5 At5g44770 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 3 24 6 At5g44930 exostosin family protein contains Pfam profile: PF03016 Exostosin family 3 3 24 7 At5g44990 hypothetical protein 3 3 24 8 At5g45130 Ras-related protein (RHA1) / small GTP-binding protein identical to Ras-related protein RHA1 SP:P31582 from [Arabidopsis thaliana] 3 3 24 9 At5g45190 "cyclin family protein similar to cyclin T1 [Equus caballus] GI:5052355; contains Pfam profile PF00134: Cyclin, N-terminal domain" 3 3 24 10 At5g47730 "SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative similar to polyphosphoinositide binding protein SEC14 homolog Ssh1p (GI:2739044) {Glycine max}" 3 3 24 11 At5g47790 forkhead-associated domain-containing protein / FHA domain-containing protein 3 3 24 12 At5g47940 expressed protein 3 3 24 13 At5g48000 cytochrome P450 family protein similar to steroid 22-alpha-hydroxylase; DWF4; CYP90B1 (GI:2935342) [Arabidopsis thaliana] 3 3 24 14 At5g48175 expressed protein contains weak similarity to thioglucoside glucohydrolase (GI:5524767) [Arabidopsis thaliana] 3 3 24 15 At5g48230 "acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase" 3 3 24 16 At5g48385 expressed protein 3 3 24 17 At5g48430 "expressed protein low similarity to extracellular dermal glycoprotein EDGP precursor [Daucus carota] GI:285741, SP|P13917 Basic 7S globulin precursor {Glycine max}; expression supported by MPSS" 3 3 24 18 At5g51130 expressed protein contains similarity to unknown protein (pir||T26512) 3 3 24 19 At5g51180 expressed protein 3 3 24 20 At5g51320 hypothetical protein contains Pfam profile PF03778: Protein of unknown function (DUF321) 3 3 24 21 At5g51380 F-box family protein contains Pfam PF00646: F-box domain; similar to F-box protein FBL2 (GI:6063090) [Homo sapiens] 3 3 24 22 At5g51550 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region 3 3 24 23 At5g51610 ribosomal protein L11 family protein 3 3 24 24 At5g51750 subtilase family protein similar to subtilisin-like protease GI:3687307 from [Lycopersicon esculentum] 3 3 24 25 At5g51800 expressed protein 3 3 25 1 At5g54560 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) 3 3 25 2 At5g54590 "protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719" 3 3 25 3 At5g54745 DegP protease family contains similarity to DegP2 protease [Arabidopsis thaliana] gi|13172275|gb|AAK14061 3 3 25 4 At5g54800 "glucose-6-phosphate/phosphate translocator, putative identical to glucose 6 phosphate/phosphate translocator [Arabidopsis thaliana] gi|7229675|gb|AAF42936" 3 3 25 5 At5g54940 "eukaryotic translation initiation factor SUI1, putative similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1" 3 3 25 6 At5g54990 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type" 3 3 25 7 At5g55130 "molybdenum cofactor synthesis protein 3 / molybdopterin synthase sulphurylase (CNX5) identical to SP|Q9ZNW0 Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) {Arabidopsis thaliana}; contains Pfam profiles PF00899: ThiF family, PF00581: Rhodanese-like domain, PF05237: MoeZ/MoeB domain" 3 3 25 8 At5g55170 small ubiquitin-like modifier 3 (SUMO) similar to SP|O13351 Ubiquitin-like protein smt3/pmt3 {Schizosaccharomyces pombe}; identical to cDNA small ubiquitin-like modifier 3 (SUMO) GI:22652845 3 3 25 9 At5g57860 ubiquitin family protein contains Pfam profile PF00240: Ubiquitin family 3 3 25 10 At5g57890 "anthranilate synthase beta subunit, putative strong similarity to anthranilate synthase beta chain GI:403434 [Arabidopsis thaliana]" 3 3 25 11 At5g58060 SNARE protein-related similar to SNARE protein Ykt6 [Homo sapiens] GI:2507637 3 3 25 12 At5g58120 "disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein." 3 3 25 13 At5g58260 expressed protein 3 3 25 14 At5g58320 kinase interacting protein-related low similarity to kinase interacting protein 1 [Petunia integrifolia] GI:13936326 3 3 25 15 At5g58450 "expressed protein predicted proteins from D.melanogaster, C.elegans and S.pombe" 3 3 25 16 At5g58510 "expressed protein KIAA0066, Homo sapiens, EMBL:HSORFKG1O" 3 3 25 17 At5g61100 hypothetical protein 3 3 25 18 At5g61150 leo1-like family protein weak similarity to SP|P38439 LEO1 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04004: Leo1-like protein; supporting cDNA gi|21929714|gb|AF490422.1| 3 3 25 19 At5g61310 "cytochrome c oxidase subunit Vc, putative / COX5C, putative similar to cytochrome c oxidase subunit 5c [Helianthus annuus] GI:18409602; contains Pfam profile PF05799: Cytochrome c oxidase subunit Vc (COX5C)" 3 3 25 20 At5g61360 expressed protein 3 3 25 21 At5g61520 "hexose transporter, putative similar to hexose carrier protein hex6 {Ricinus communis} SP|Q07423; contains Pfam profile PF00083: major facilitator superfamily protein" 3 3 25 22 At5g61540 "L-asparaginase, putative / L-asparagine amidohydrolase, putative similar to Swiss-Prot:O02467 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (Glycosylasparaginase) (Aspartylglucosaminidase)(N4-(N-acetyl-beta- glucosaminyl)-L-asparagine amidase) (AGA)[Spodoptera frugiperda]" 3 3 25 23 At5g61700 "ABC transporter family protein ABC family transporter, Entamoeba histolytica, EMBL:EH058" 3 3 25 24 At5g61760 "inositol polyphosphate 6-/3-/5-kinase 2b (IPK2b) contains Pfam domain, PF03770: inositol polyphosphate kinase" 3 3 25 25 At5g64450 "hypothetical protein contains Pfam profile PF04396: Protein of unknown function, DUF537" 3 3 26 1 At5g64480 expressed protein 3 3 26 2 At5g64630 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] 3 3 26 3 At5g64680 expressed protein 3 3 26 4 At5g64816 expressed protein 3 3 26 5 At5g64850 expressed protein 3 3 26 6 At5g65000 nucleotide-sugar transporter family protein low similarity to SP|Q9Y2D2 UDP N-acetylglucosamine transporter {Homo sapiens}; contains Pfam profile PF04142: Nucleotide-sugar transporter 3 3 26 7 At5g65040 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana] 3 3 26 8 At5g67580 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain 3 3 26 9 At5g67640 expressed protein ; expression supported by MPSS 3 3 26 10 At4g09270 hypothetical protein same aa sequence as protein T8A17_30 because of location on repetitive section 3 3 26 11 At5g50690 "short-chain dehydrogenase/reductase (SDR) family protein similar to steroleosin [Sesamum indicum] GI:15824408; contains Pfam profile PF00106: oxidoreductase, short chain dehydrogenase/reductase family" 3 3 26 12 ath-MIR164b miRNA gene Arabidopsis thaliana miR164b stem-loop 3 3 26 13 ath-MIR160a miRNA gene Arabidopsis thaliana miR160a stem-loop 3 3 26 14 ath-MIR399b miRNA gene Arabidopsis thaliana miR399b stem-loop 3 3 26 15 ath-MIR159c miRNA gene Arabidopsis thaliana miR159c stem-loop 3 3 26 16 atc04 Randomly generated negative control 3 3 26 17 atc10 Randomly generated negative control 3 3 26 18 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 3 26 19 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 3 3 26 20 Alien6 Control: Stratagene Spotreport Alien Oligo 3 3 26 21 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 3 3 26 22 atc08 Randomly generated negative control 3 3 26 23 Alien2 Control: Stratagene Spotreport Alien Oligo 3 3 26 24 Blank Blank 3 3 26 25 Blank Blank 3 4 1 1 atc04 Randomly generated negative control 3 4 1 2 atc10 Randomly generated negative control 3 4 1 3 At5g42300 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain 3 4 1 4 At1g75780 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} 3 4 1 5 Alien6 Control: Stratagene Spotreport Alien Oligo 3 4 1 6 At1g17745 D-3-phosphoglycerate dehydrogenase / 3-PGDH identical to SP|O04130 3 4 1 7 atc08 Randomly generated negative control 3 4 1 8 Alien2 Control: Stratagene Spotreport Alien Oligo 3 4 1 9 At1g02840 pre-mRNA splicing factor SF2 (SF2) / SR1 protein identical to SP|O22315 Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis thaliana} 3 4 1 10 At1g02850 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max] 3 4 1 11 At1g02965 hypothetical protein 3 4 1 12 At1g03000 "AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities)" 3 4 1 13 At1g03130 "photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD2) similar to SP|P12353 Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) {Spinacia oleracea}; contains Pfam profile PF02531: PsaD" 3 4 1 14 At1g03190 DNA repair protein / transcription factor protein (UVH6) identical to DNA repair/transcription factor protein (UVH6) gi:22651569 gb:AY090788 3 4 1 15 At1g03370 "C2 domain-containing protein / GRAM domain-containing protein contains Pfam profiles PF00168: C2 domain; contains PF02893: GRAM domain; similar to Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus]" 3 4 1 16 At1g03430 "two-component phosphorelay mediator, putative strong similarity to ATHP1 [Arabidopsis thaliana] GI:4156241" 3 4 1 17 At1g06090 fatty acid desaturase family protein similar to delta 9 acyl-lipid desaturase GB:BAA25180 GI:2970034 (ADS1) from [Arabidopsis thaliana] 3 4 1 18 At1g06130 "hydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II isozyme GB:AAC49865 GI:2570338 from [Arabidopsis thaliana]" 3 4 1 19 At1g06270 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 1 20 At1g06340 agenet domain-containing protein contains Pfam PF05641: Agenet domain 3 4 1 21 At1g06510 expressed protein 3 4 1 22 At1g06570 4-hydroxyphenylpyruvate dioxygenase (HPD) identical to 4-hydroxyphenylpyruvate dioxygenase (HPD) SP:P93836 [Arabidopsis thaliana (Mouse-ear cress)] 3 4 1 23 At1g06750 hypothetical protein 3 4 1 24 At1g06790 "RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains Pfam profile PF03876: RNA polymerase Rpb7, N-terminal domain" 3 4 1 25 At1g09280 expressed protein contains Pfam profile: PF03959 domain of unknown function (DUF341) 3 4 2 1 At1g09340 expressed protein 3 4 2 2 At1g09500 "cinnamyl-alcohol dehydrogenase family / CAD family similar to cinnamyl alcohol dehydrogenase, Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna unguiculata [gi:1854445]" 3 4 2 3 At1g09540 myb family transcription factor (MYB61) contains PFAM profile: myb DNA-binding domain PF00249 3 4 2 4 At1g09680 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 2 5 At1g09740 "ethylene-responsive protein, putative similar to ER6 protein [Lycopersicon esculentum] GI:5669654; contains Pfam profile PF00582: universal stress protein family" 3 4 2 6 At1g09880 hypothetical protein 3 4 2 7 At1g09932 phosphoglycerate/bisphosphoglycerate mutase-related weak hit to Pfam profile PF00300: phosphoglycerate mutase family 3 4 2 8 At1g12520 "superoxide dismutase copper chaperone, putative similar to copper chaperone for superoxide dismutase [Homo sapiens] gi|2431868|gb|AAC51764" 3 4 2 9 At1g12580 "protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains similarity to calcium-dependent protein kinase GI:5162877 from [Marchantia polymorpha]" 3 4 2 10 At1g12770 "DEAD/DEAH box helicase family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles: PF00271 helicase conserved C-terminal domain, PF01535 PPR repeat, PF00270: DEAD/DEAH box helicase" 3 4 2 11 At1g12820 "transport inhibitor response protein, putative E3 ubiquitin ligase SCF complex F-box subunit; similar to transport inhibitor response 1 GI:2352492 from [Arabidopsis thaliana]" 3 4 2 12 At1g12990 "glycosyl transferase family 17 protein low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus [SP|Q10470], Rattus norvegicus [SP|Q02527], Homo sapiens [SP|Q09327]; contains Pfam profile PF04724 :Glycosyltransferase family 17" 3 4 2 13 At1g13060 20S proteasome beta subunit E1 (PBE1) (PRCE) identical to GB:O23717; identical to cDNA proteasome subunit prce GI:2511595 3 4 2 14 At1g13220 nuclear matrix constituent protein-related similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] GI:2190187 3 4 2 15 At1g13270 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 3 4 2 16 At1g15920 "CCR4-NOT transcription complex protein, putative similar to SWISS-PROT:Q60809 CCR4-NOT transcription complex, subunit 7 (CCR4-associated factor 1, (CAF1) [Mus musculus]" 3 4 2 17 At1g15960 "NRAMP metal ion transporter 6, putative (NRAMP6) identical to putative metal transporter [Arabidopsis thaliana] gi|12666983|emb|CAC28123; similar to NRAMP1 protein [Arabidopsis thaliana] gi|7108911|gb|AAF36535; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563; contains a possible frameshift" 3 4 2 18 At1g16130 "wall-associated kinase, putative similar to putative serine/threonine-specific protein kinase GI:7270012 from [Arabidopsis thaliana]" 3 4 2 19 At1g16190 "DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]" 3 4 2 20 At1g16370 "transporter-related low similarity to organic cation transporter OCTN1 from [Homo sapiens] GI:2605501, [Mus musculus] GI:4126605, [Rattus norvegicus] GI:5679326; contains Pfam profile PF00083: major facilitator superfamily protein" 3 4 2 21 At1g16410 "cytochrome P450, putative similar to gb|AF069494 cytochrome P450 from Sinapis alba and is a member of the PF|00067 Cytochrome P450 family" 3 4 2 22 At1g16570 "glycosyl transferase family 1 protein contains similarity to mannosyltransferase GI:1800223 from Dictyostelium discoideum; contains Pfam glycosyl transferase, group 1 family protein domain PF00534" 3 4 2 23 At1g16640 transcriptional factor B3 family protein low similarity to reproductive meristem protein 1 [Arabidopsis thaliana] GI:13604227; contains Pfam profile PF02362: B3 DNA binding domain 3 4 2 24 At1g19430 dehydration-responsive protein-related low similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase 3 4 2 25 At1g19485 "AT hook motif-containing protein contains Pfam profile: PF00730 HhH-GPD superfamily base excision DNA repair protein; contains Pfam PF02178: AT hook motif; contains Pfam PF00400: WD domain, G-beta repeat (5 copies); contains Prosite PS00354: HMG-I and HMG-Y DNA-binding domain (A+T-hook)" 3 4 3 1 At1g19670 coronatine-responsive protein / coronatine-induced protein 1 (CORI1) identical to coronatine-induced protein 1 (CORI1) GI:30912637 from [Arabidopsis thaliana] 3 4 3 2 At1g19720 "pentatricopeptide (PPR) repeat-containing protein nearly identical over 405 amino acids to DYW7 protein of unknown function GB:CAA06829 from [Arabidopsis thaliana] (Plant Mol. Biol. 42 (4), 603-613 (2000)); contains Pfam profile PF01535: PPR repeat" 3 4 3 3 At1g19920 sulfate adenylyltransferase 2 / ATP-sulfurylase 2 (ASA1) (MET3-1) (APS2) identical to ATP sulfurylase (APS2) [Arabidopsis thaliana] GI:1575324 3 4 3 4 At1g19980 cytomatrix protein-related contains weak similarity to CAST1 [Rattus norvegicus] gi|22138113|gb|AAL07517 3 4 3 5 At1g20180 hypothetical protein similar to At14a (GI:11994571 and GI:11994573) [Arabidopsis thaliana] 3 4 3 6 At1g20240 hypothetical protein 3 4 3 7 At1g22960 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 3 8 At1g23010 multi-copper oxidase type I family protein similar to SP|P07788 Spore coat protein A {Bacillus subtilis}; contains Pfam profile PF00394: Multicopper oxidase 3 4 3 9 At1g23150 expressed protein 3 4 3 10 At1g23205 "invertase/pectin methylesterase inhibitor family protein low similarity to pectinesterase from Phaseolus vulgaris SP|Q43111, Lycopersicon esculentum SP|Q43143; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor" 3 4 3 11 At1g23360 "UbiE/COQ5 methyltransferase family protein similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase GB:BAA25267 GI:2982680 from [Micrococcus luteus]; contains Pfam profile PF01209: methlytransferase, UbiE/COQ5 family" 3 4 3 12 At1g23390 "kelch repeat-containing F-box family protein similar to hypothetical protein GB:AAF27090 GI:6730669 from (Arabidopsis thaliana); contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 4 3 13 At1g23530 expressed protein 3 4 3 14 At1g23590 expressed protein contains Pfam profile PF02713: Domain of unknown function DUF220 3 4 3 15 At1g27310 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 3 4 3 16 At1g27360 squamosa promoter-binding protein-like 11 (SPL11) identical to squamosa promoter binding protein-like 11 [Arabidopsis thaliana] GI:5931665; contains Pfam profile PF03110: SBP domain 3 4 3 17 At1g27470 transducin-related / WD-40 repeat protein-related contains 6 WD-40 repeats (PF00400) (2 weak); related to KIAA1988 protein (GI:18916910) [Homo sapiens] 3 4 3 18 At1g27530 expressed protein Similar to gb|AF151884 CGI-126 protein from Homo sapiens. EST gb|Z18048 comes from this gene 3 4 3 19 At1g27690 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) 3 4 3 20 At1g27740 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain 3 4 3 21 At1g27910 U-box domain-containing protein contains Pfam profile PF04564: U-box domain 3 4 3 22 At1g27970 "nuclear transport factor 2 (NTF2), putative similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) [Saccharomyces cerevisiae]" 3 4 3 23 At1g30870 "cationic peroxidase, putative similar to cationic peroxidase (gi|1232069); similar to EST gb|AI100412" 3 4 3 24 At1g30930 F-box family protein contains F-box domain Pfam:PF00646 3 4 3 25 At1g31150 expressed protein EST gb|Z33866 comes from this gene 3 4 4 1 At1g31190 inositol monophosphatase family protein similar to SP|P29218 Myo-inositol-1(or 4)-monophosphatase (EC 3.1.3.25) (Inositol monophosphatase) {Homo sapiens}; contains Pfam profile PF00459: Inositol monophosphatase family; EST gb|AA597395 comes from this gene 3 4 4 2 At1g31370 expressed protein ; expression supported by MPSS 3 4 4 3 At1g31430 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 4 4 4 At1g31640 MADS-box protein-related contains INTERPRO:IPR02100 MADS-box domain ;similar to MADS box transcription factor GI:3688589 from [Triticum aestivum] 3 4 4 5 At1g31710 "copper amine oxidase, putative similar to copper amine oxidase [Lens culinaris] gi|15451834|gb|AAB34918" 3 4 4 6 At1g34760 "14-3-3 protein GF14 omicron (GRF11) identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron (General regulatory factor 11){Arabidopsis thaliana}" 3 4 4 7 At1g34910 hypothetical protein 3 4 4 8 At1g35250 thioesterase family protein contains Pfam profile PF03061: thioesterase family protein 3 4 4 9 At1g35340 ATP-dependent protease La (LON) domain-containing protein contains Pfam profile PF02190: ATP-dependent protease La (LON) domain 3 4 4 10 At1g35530 "DEAD/DEAH box helicase, putative low similarity to RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain" 3 4 4 11 At1g35610 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 3 4 4 12 At1g35820 hypothetical protein 3 4 4 13 At1g35900 hypothetical protein 3 4 4 14 At1g47480 expressed protein similar to PrMC3 [Pinus radiata] GI:5487873 3 4 4 15 At1g47510 "endonuclease/exonuclease/phosphatase family protein similar to SP|P32019 Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.56) {Homo sapiens}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family" 3 4 4 16 At1g47690 hypothetical protein 3 4 4 17 At1g47760 MADS-box protein (AGL102) contains similarity to MADS-box protein GB:AAC26702 GI:3128222 from [Arabidopsis thaliana]; contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) 3 4 4 18 At1g47900 expressed protein 3 4 4 19 At1g47980 expressed protein 3 4 4 20 At1g48140 "dolichol-phosphate mannosyltransferase-related contains weak similarity to Swiss-Prot:Q9P2X0 dolichol-phosphate mannosyltransferase subunit 3 (Dolichol-phosphate mannose synthase subunit 3, Dolichyl-phosphate beta-D- mannosyltransferase subunit 3, Mannose-P-dolichol synthase subunit 3, MPD synthase subunit 3, DPM synthase complex subunit 3, Prostin 1 [Homo sapiens]" 3 4 4 21 At1g48180 expressed protein ; expression supported by MPSS 3 4 4 22 At1g51250 expressed protein similar to hypothetical protein GB:AAD30637 3 4 4 23 At1g51310 tRNA methyl transferase family protein contains Pfam PF03054: tRNA methyl transferase profile; similar to tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61). (Swiss-Prot:Q8ZPZ4) [Salmonella typhimurium] 3 4 4 24 At1g51450 "SPla/RYanodine receptor (SPRY) domain-containing protein low similarity to DEAD box protein DDX1 [Gallus gallus] GI:16323037, ryanodine receptor [Caenorhabditis elegans] GI:1871447; contains Pfam profile PF00622: SPRY domain" 3 4 4 25 At1g51510 "RNA-binding protein, putative similar to RNA-binding protein 8 (Ribonucleoprotein RBM8) SP:Q9Y5S9 from [Homo sapiens], RNA-binding protein Y14 [Xenopus laevis] GI:11034807; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)" 3 4 5 1 At1g51650 "ATP synthase epsilon chain, mitochondrial identical to ATP synthase epsilon chain, mitochondrial SP:Q96253 from [Arabidopsis thaliana]" 3 4 5 2 At1g51690 "serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to 55 kDa B regulatory subunit of phosphatase 2A (GI:710330) [Arabidopsis thaliana]; similar to type 2A protein serine/threonine phosphatase 55 kDa B regulatory GI:1408460 [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak)" 3 4 5 3 At1g51840 protein kinase-related contains similarity to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 3 4 5 4 At1g51900 hypothetical protein 3 4 5 5 At1g54520 expressed protein 3 4 5 6 At1g54575 expressed protein 3 4 5 7 At1g54760 MADS-box family protein similar to MADS-box transcription factor GI:4837612 from [Antirrhinum majus] 3 4 5 8 At1g54820 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 5 9 At1g54960 "NPK1-related protein kinase, putative (ANP2) similar to protein kinase [Nicotiana tabacum] gi|456309|dbj|BAA05648; identical to cDNA NPK1-related protein kinase 2, partial cds GI:2342424" 3 4 5 10 At1g55020 lipoxygenase (LOX1) identical to SP|Q06327 3 4 5 11 At1g55210 disease resistance response protein-related/ dirigent protein-related smimilar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 4 5 12 At1g55260 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 3 4 5 13 At1g59725 "DNAJ heat shock protein, putative similar to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain" 3 4 5 14 At1g59780 "disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein." 3 4 5 15 At1g59900 "pyruvate dehydrogenase E1 component alpha subunit, mitochondrial (PDHE1-A) identical to SP|P52901 Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) {Arabidopsis thaliana}" 3 4 5 16 At1g59960 "aldo/keto reductase, putative similar to NADPH-dependent codeinone reductase GI:6478210 [Papaver somniferum], NAD(P)H dependent 6'-deoxychalcone synthase [Glycine max][GI:18728]" 3 4 5 17 At1g60140 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase 3 4 5 18 At1g60220 "Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 4 5 19 At1g60450 "galactinol synthase, putative similar to galactinol synthase GI:5608497 from [Ajuga reptans]; contains Pfam profile: PF01501 glycosyl transferase family 8" 3 4 5 20 At1g60540 "dynamin family protein similar to SP|Q91192 Interferon-induced GTP-binding protein Mx {Oncorhynchus mykiss}; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain" 3 4 5 21 At1g63340 flavin-containing monooxygenase-related / FMO-related low similarity to flavin-containing monooxygenase 2 (FMO2) from Homo sapiens [SP|Q99518] 3 4 5 22 At1g63400 pentatricopeptide (PPR) repeat-containing protein contains multiple PPR-repeats Pfam profile: PF01535 3 4 5 23 At1g63590 receptor-like protein kinase-related contains Pfam PF01657: Domain of unknown function; similar to receptor-like protein kinase 4 (GI:13506745) {Arabidopsis thaliana} 3 4 5 24 At1g63640 kinesin motor protein-related C-terminal region is similar to C-term region of kinesin motor protein GB:AAB51397 (Mus musculus); contains Pfam profile: PF00225 Kinesin motor domain 3 4 5 25 At1g63770 peptidase M1 family protein similar to SP|P04825 Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) {Escherichia coli}; contains Pfam profile PF01433: Peptidase family M1 3 4 6 1 At1g63830 "proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965; contains 1 predicted transmembrane domain" 3 4 6 2 At1g63970 "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GI:7621712 from [Catharanthus roseus]" 3 4 6 3 At1g64010 "serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor)" 3 4 6 4 At1g66810 "zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)" 3 4 6 5 At1g66870 "glycosyl hydrolase family protein 17 similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum]" 3 4 6 6 At1g67035 expressed protein ; expression supported by MPSS 3 4 6 7 At1g67090 "ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) identical to SP|P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) {Arabidopsis thaliana}" 3 4 6 8 At1g67270 hypothetical protein 3 4 6 9 At1g67310 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from[Nicotiana tabacum] 3 4 6 10 At1g67480 "kelch repeat-containing F-box family protein similar to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain" 3 4 6 11 At1g67540 expressed protein ; expression supported by MPSS 3 4 6 12 At1g70180 sterile alpha motif (SAM) domain-containing protein contains Pfam profile PF00536: SAM domain (Sterile alpha motif) 3 4 6 13 At1g70220 hypothetical protein 3 4 6 14 At1g70410 "carbonic anhydrase, putative / carbonate dehydratase, putative similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase" 3 4 6 15 At1g70450 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 6 16 At1g70580 "glutamate:glyoxylate aminotransferase 2 (GGT2) identical to glutamate:glyoxylate aminotransferase 2 [Arabidopsis thaliana] GI:24461829; similar to alanine aminotransferase from Panicum miliaceum [SP|P34106], GI:4730884 from Oryza sativa; contains Pfam profile PF00155: aminotransferase, classes I and II" 3 4 6 17 At1g70620 cyclin-related contains weak similarity to Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I) [Bos taurus] 3 4 6 18 At1g70790 C2 domain-containing protein similar to zinc finger and C2 domain protein GI:9957238 from [Arabidopsis thaliana] 3 4 6 19 At1g70830 "Bet v I allergen family protein similar to Csf-2 [Cucumis sativus][GI:5762258][J Am Soc Hortic Sci 124, 136-139 (1999)] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family" 3 4 6 20 At1g73655 "immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains Pfam PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type" 3 4 6 21 At1g73710 "pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587, post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat" 3 4 6 22 At1g73875 endonuclease/exonuclease/phosphatase family protein contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family 3 4 6 23 At1g73930 expressed protein 3 4 6 24 At1g74080 myb family transcription factor (MYB122) contains Pfam profile: PF00249 myb-like DNA-binding domain 3 4 6 25 At1g74140 hypothetical protein 3 4 7 1 At1g74320 "choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375" 3 4 7 2 At1g74370 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)" 3 4 7 3 AT5G57480 PC-1 D10 3 4 7 4 3XSSC PC-1 D22 3 4 7 5 AT1G29930 PC-1 H10 3 4 7 6 3XSSC PC-1 H22 3 4 7 7 AT3G44150 PC-1 L10 3 4 7 8 3XSSC PC-1 L22 3 4 7 9 AT4G00810 PC-1 P10 3 4 7 10 3XSSC PC-1 P22 3 4 7 11 At1g77130 "glycogenin glucosyltransferase (glycogenin)-related contains similarity to glycogenin-1 from Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730], Homo sapiens [SP|P46976]" 3 4 7 12 At1g77180 "chromatin protein family contains Pfam domain, PF02731: SKIP/SNW domain found in chromatin proteins." 3 4 7 13 At1g77370 "glutaredoxin, putative similar to glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699" 3 4 7 14 At1g77420 "hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family" 3 4 7 15 At1g77600 expressed protein weak similarity to Pds5 (GI:16751524) [Schizosaccharomyces pombe]; weak similarity to androgen-induced prostate proliferative shutoff associated protein (GI:4559410) [Homo sapiens] 3 4 7 16 At1g77655 expressed protein 3 4 7 17 At1g77800 "PHD finger family protein contains Pfam domain, PF00628: PHD-finger" 3 4 7 18 At1g77840 "eukaryotic translation initiation factor 5, putative / eIF-5, putative similar to SP|P55876 Eukaryotic translation initiation factor 5 (eIF-5) {Zea mays}; contains Pfam profiles PF02020: eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in IF2B/IF5" 3 4 7 19 At1g80410 "acetyltransferase-related low similarity to acetyltransferase Tubedown-1 [Mus musculus] GI:8497318, N-TERMINAL ACETYLTRANSFERASE GB:P12945 from (Saccharomyces cerevisiae); contains Pfam profile PF00515 TPR Domain" 3 4 7 20 At1g80460 "glycerol kinase, putative similar to glycerol kinase (ATP:glycerol 3-phosphotransferase, Glycerokinase, GK)[Mycobacterium tuberculosis] Swiss-Prot:O69664" 3 4 7 21 At1g80640 "protein kinase family protein contains protein kinase domain, Pfam:PF00069" 3 4 7 22 At1g80700 expressed protein 3 4 7 23 At1g80860 expressed protein 3 4 7 24 At1g80910 expressed protein 3 4 7 25 At2g01100 expressed protein 3 4 8 1 At2g01140 "fructose-bisphosphate aldolase, putative similar to plastidic aldolase NPALDP1 from Nicotiana paniculata [GI:4827251]; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I" 3 4 8 2 At2g04060 "beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P49676 from [Brassica oleracea]" 3 4 8 3 At2g04100 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family 3 4 8 4 At2g04360 expressed protein 3 4 8 5 At2g04410 expressed protein 3 4 8 6 At2g04570 "GDSL-motif lipase/hydrolase family protein similar to family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382), EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif" 3 4 8 7 At2g04660 "E3 ubiquitin ligase, putative E3, ubiquitin ligase; contains similarity to anaphase-promoting complex subunit 2 GI:6180009 from [Homo sapiens]" 3 4 8 8 At2g04860 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats 3 4 8 9 At2g04910 glycosyl hydrolase family protein 17 similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] 3 4 8 10 At2g12140 "hypothetical protein includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, At2g05480, At2g12140, At1g45080, At2g16330" 3 4 8 11 At2g12320 hypothetical protein 3 4 8 12 At2g12945 hypothetical protein 3 4 8 13 At2g13270 hypothetical protein 3 4 8 14 At2g13610 ABC transporter family protein 3 4 8 15 At2g13650 GDP-mannose transporter (GONST1) identical to GDP-mannose transporter SP:Q941R4 from [Arabidopsis thaliana] 3 4 8 16 At2g13960 myb family transcription factor contains PFAM profile: PF00249 myb-like DNA binding domain 3 4 8 17 At2g14045 expressed protein 3 4 8 18 At2g17250 expressed protein weak similarity to Ribosome biogenesis protein MAK21 (Swiss-Prot:Q12176) [Saccharomyces cerevisiae] 3 4 8 19 At2g17300 expressed protein 3 4 8 20 At2g17510 ribonuclease II family protein similar to SP|P37202 Mitotic control protein dis3 {Schizosaccharomyces pombe}; contains Pfam profile PF00773: RNB-like protein 3 4 8 21 At2g17560 high mobility group protein gamma (HMGgamma) / HMG protein gamma nearly identical to HMG protein (HMGgamma) [Arabidopsis thaliana] GI:2832355 3 4 8 22 At2g17720 "oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus [GI:212530], Rattus norvegicus [GI:474940], Mus musculus [SP|Q60715]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain" 3 4 8 23 At2g17780 "expressed protein contains Pfam profile PF04749: Protein of unknown function, DUF614" 3 4 8 24 At2g17950 homeodomain transcription factor (WUSCHEL) 99.4% identical to WUSCHELL (GI:4090200) [Arabidopsis thaliana] 3 4 8 25 At2g17990 expressed protein 3 4 9 1 At2g20720 pentatricopeptide (PPR) repeat-containing protein contains Pfam TIGR00756: pentatricopeptide repeat domain 3 4 9 2 At2g20760 expressed protein 3 4 9 3 At2g20860 lipoic acid synthase (LIP1) identical to gi:3928758 contains Pfam profile PF04055: radical SAM domain protein 3 4 9 4 At2g20900 "diacylglycerol kinase, putative contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain" 3 4 9 5 At2g21070 expressed protein 3 4 9 6 At2g21130 "peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase identical to cyclophilin [Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34790" 3 4 9 7 At2g21250 "mannose 6-phosphate reductase (NADPH-dependent), putative 6-phosphate reductase [Apium graveolens][GI:1835701], NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Malus domestica][SP|P28475]" 3 4 9 8 At2g21300 kinesin motor family protein contains Pfam profile: kinesin motor domain PF00225 3 4 9 9 At2g24190 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily 3 4 9 10 At2g24250 F-box family protein contains Pfam:PF00646 F-box domain 3 4 9 11 At2g24410 hypothetical protein 3 4 9 12 At2g24470 hypothetical protein 3 4 9 13 At2g24630 "glycosyl transferase family 2 protein similar to cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535" 3 4 9 14 At2g24693 Expressed protein 3 4 9 15 At2g24880 "self-incompatibility protein-related low similarity to self-incompatibility from [Papaver nudicaule] GI:3097262, [Papaver rhoeas] GI:3097260" 3 4 9 16 At2g24940 cytochrome b5 domain-containing protein similar to SP|P70580 Membrane associated progesterone receptor component 1 {Rattus norvegicus}; contains Pfam profile PF00173: Heme/Steroid binding domain 3 4 9 17 At2g27650 "ubiquitin carboxyl-terminal hydrolase-related contains Pfam profiles PF04780: Protein of unknown function (DUF629), PF04781: Protein of unknown function (DUF627)" 3 4 9 18 At2g27710 60S acidic ribosomal protein P2 (RPP2B) 3 4 9 19 At2g27820 prephenate dehydratase family protein 3 4 9 20 At2g27880 "argonaute protein, putative / AGO, putative similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}; contains Pfam profiles PF02170: PAZ domain, PF02171: Piwi domain" 3 4 9 21 At2g28060 "protein kinase-related similar to GAL83 protein [Solanum tuberosum] GI:5702015; contains Pfam profile PF04739: 5'-AMP-activated protein kinase, beta subunit, complex-interacting region; supporting cDNA gi|22652763|gb|AF491295.1|" 3 4 9 22 At2g28105 expressed protein 3 4 9 23 At2g28290 "chromatin remodeling protein, putative (SYD) similar to transcriptional activator HBRM [Homo sapiens] GI:414117; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain; identical to cDNA putative chromatin remodeling protein SYD (SPLAYED) GI:13603720" 3 4 9 24 At2g28315 "transporter-related low similarity to SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP- GlcA/UDP-GalNAc transporter) {Homo sapiens}, SP|Q95YI5 UDP-sugar transporter UST74c (Fringe connection protein) {Drosophila melanogaster}" 3 4 9 25 At2g31050 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 3 4 10 1 At2g31085 Clavata3 / ESR-Related-6 (CLE6) CLAVATA3/ESR-Related 6 (CLE6) 3 4 10 2 At2g31250 "glutamyl-tRNA reductase, putative similar to HEMA2 [SP|P49294], HEMA1 [SP|P42804]" 3 4 10 3 At2g31305 expressed protein 3 4 10 4 At2g31450 endonuclease-related similar to endonuclease III [Homo sapiens] GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif 3 4 10 5 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) identical to ARIADNE-like protein ARI7 [Arabidopsis thaliana] GI:29125028; contains similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster]; contains Pfam profile PF01485: IBR domain 3 4 10 6 At2g31680 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:289370 from [Brassica napus]" 3 4 10 7 At2g31730 "ethylene-responsive protein, putative similar to ethylene-inducible ER33 protein [Lycopersicon esculentum] gi|5669656|gb|AAD46413" 3 4 10 8 At2g34310 expressed protein 3 4 10 9 At2g34350 nodulin-related weak similarity to nodule-specific protein Nlj70 [Lotus japonicus] GI:3329366 3 4 10 10 At2g34470 urease accessory protein (UREG) identical to urease accessory protein UREG GI:4324678 from [Arabidopsis thaliana]; contains Pfam profile: PF01495 HypB/UreG nucleotide-binding domain 3 4 10 11 At2g34530 expressed protein 3 4 10 12 At2g34670 "proline-rich family protein contains proline-rich region, INTERPRO:IPR000694" 3 4 10 13 At2g34730 "myosin heavy chain-related low similarity to SP|P14105 Myosin heavy chain, nonmuscle (Cellular myosin heavy chain) {Gallus gallus}" 3 4 10 14 At2g34910 expressed protein 3 4 10 15 At2g34980 "phosphatidylinositolglycan synthase family protein similar to SP|Q92535 Phosphatidylinositol-glycan biosynthesis, class C protein (PIG-C) {Homo sapiens}" 3 4 10 16 At2g37560 origin recognition complex subunit 2 (ORC2) identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from [Arabidopsis thaliana] 3 4 10 17 At2g37590 Dof-type zinc finger domain-containing protein 3 4 10 18 At2g37760 "aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592]" 3 4 10 19 At2g37800 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 10 20 At2g37970 SOUL heme-binding family protein weak similarity to SOUL protein [Mus musculus] GI:4886906; contains Pfam profile PF04832: SOUL heme-binding protein 3 4 10 21 At2g38020 "vacuoleless1 (VCL1) contains Pfam profiles: PF04841 Vps16, N-terminal region, PF04840: Vps16, C-terminal region; identical to cDNA VCL1 (VCL1) GI:13877132" 3 4 10 22 At2g38180 GDSL-motif lipase/hydrolase family protein similar to SP|P41734 Isoamyl acetate-hydrolyzing esterase (EC 3.1.-.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00657: Lipase/Acylhydrolase with GDSL-like motif 3 4 10 23 At2g38220 expressed protein 3 4 10 24 At2g40770 "SNF2 domain-containing protein / helicase domain-containing protein / zinc finger (C3HC4 type RING finger) family protein low similarity to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 4 10 25 At2g40820 "proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965" 3 4 11 1 At2g40940 ethylene response sensor / ethylene-responsive sensor (ERS) identical to ethylene response sensor (ERS) [Arabidopsis thaliana] GI:1046225 3 4 11 2 At2g40990 zinc finger (DHHC type) family protein contains Pfam profile PF01529: DHHC zinc finger domain 3 4 11 3 At2g41150 expressed protein an isoform contains a GA donor splice site supported by FL-cDNA alignment which truncates the ORF. 3 4 11 4 At2g41210 "phosphatidylinositol-4-phosphate 5-kinase family protein similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF02493: MORN repeat" 3 4 11 5 At2g41390 expressed protein 3 4 11 6 At2g41430 dehydration-induced protein (ERD15) identical to dehydration-induced protein ERD15 GI:710626 from [Arabidopsis thaliana] 3 4 11 7 At2g43990 expressed protein 3 4 11 8 At2g44050 "6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase identical to 6,7-dimethyl-8-ribityllumazine synthase, chloroplast [precursor] SP:O80575 from [Arabidopsis thaliana]" 3 4 11 9 At2g44180 "methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to SP|P50579 Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam profile PF00557: metallopeptidase family M24" 3 4 11 10 At2g44230 expressed protein 3 4 11 11 At2g44410 expressed protein 3 4 11 12 At2g44470 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to anther-specific protein ATA27 (GI:2746341) [Arabidopsis thaliana] 3 4 11 13 At2g44610 "Ras-related GTP-binding protein, putative similar to GTP-binding protein GI:623586 from [Nicotiana tabacum] ; contains an ADP-ribosylation factors family signature for proteins involved in protein trafficking" 3 4 11 14 At2g44670 senescence-associated protein-related similar to senescence-associated protein SAG102 (GI:22331931) [Arabidopsis thaliana]; 3 4 11 15 At2g47350 "PAPA-1-like family protein / zinc finger (HIT type) family protein contains Pfam domains, PF04795: PAPA-1-like conserved region and PF04438: HIT zinc finger" 3 4 11 16 At2g47400 CP12 domain-containing protein contains Pfam profile: PF02672 CP12 domain 3 4 11 17 At2g47550 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase 3 4 11 18 At2g47610 60S ribosomal protein L7A (RPL7aA) 3 4 11 19 At2g47780 rubber elongation factor (REF) protein-related similar to Small rubber particle protein (SRPP) (22 kDa rubber particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) (Swiss-Prot:O82803) [Hevea brasiliensis]; similar to Stress-related protein (Swiss-Prot:Q9SW70) [Vitis riparia] 3 4 11 20 At2g47830 "cation efflux family protein / metal tolerance protein, putative (MTPc1) member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563" 3 4 11 21 At2g47960 expressed protein 3 4 11 22 At2g48000 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat 3 4 11 23 At3g03330 short-chain dehydrogenase/reductase (SDR) family protein contains INTERPRO family IPR002198 Short-chain dehydrogenase/reductase (SDR) superfamily 3 4 11 24 At3g03400 "calmodulin-related protein, putative similar to calmodulin-related protein 2, touch-induced SP:P25070 from [Arabidopsis thaliana]" 3 4 11 25 At3g03570 expressed protein similar to hypothetical protein GB:CAB38918 [Arabidopsis thaliana] 3 4 12 1 At3g03630 "cysteine synthase, chloroplast, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative identical to SP|O22682 Probable cysteine synthase, chloroplast precursor {Arabidopsis thaliana}, similar to SP|P31300 Cysteine synthase, chloroplast precursor {Capsicum annuum}" 3 4 12 2 At3g03780 "5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative very strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent" 3 4 12 3 At3g03840 "auxin-responsive protein, putative similar to auxin-inducible SAUR (Small Auxin Up RNAs) (GI:3043536) [Raphanus sativus]" 3 4 12 4 At3g03970 expressed protein 3 4 12 5 At3g04010 "glycosyl hydrolase family 17 protein similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp], GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon esculentum]" 3 4 12 6 At3g06545 hypothetical protein 3 4 12 7 At3g06590 expressed protein 3 4 12 8 At3g06670 expressed protein 3 4 12 9 At3g06720 "importin alpha-1 subunit, putative (IMPA1) similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321" 3 4 12 10 At3g06910 "Ulp1 protease family protein similar to sentrin/SUMO-specific protease [Homo sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain" 3 4 12 11 At3g06960 expressed protein 3 4 12 12 At3g07120 "zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 Zinc finger, C3HC4 type (RING finger)" 3 4 12 13 At3g07180 "GPI transamidase component PIG-S-related similar to GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis, class S protein) (Swiss-Prot:Q96S52) [Homo sapiens]" 3 4 12 14 At3g10210 expressed protein similar to putative protein GB:CAA20045 [Arabidopsis thaliana] 3 4 12 15 At3g10260 reticulon family protein weak similarity to Nogo-C protein [Rattus norvegicus] GI:6822251; contains Pfam profile PF02453: Reticulon; identical to cDNA GI:32331854 3 4 12 16 At3g10400 RNA recognition motif (RRM)-containing protein low similarity to splicing factor SC35 [Arabidopsis thaliana] GI:9843653; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 4 12 17 At3g10440 hypothetical protein 3 4 12 18 At3g10572 "3-phosphoinositide-dependent protein kinase-1, putative annotation temporarily based on supporting cDNA gi|17065215|gb|AY062684.1|" 3 4 12 19 At3g10610 40S ribosomal protein S17 (RPS17C) similar to 40S ribosomal protein S17 GB:AAD50774 [Lycopersicon esculentum] 3 4 12 20 At3g10750 hypothetical protein 3 4 12 21 At3g10790 F-box family protein contains F-box domain Pfam:PF00646 3 4 12 22 At3g13224 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) 3 4 12 23 At3g13230 expressed protein 3 4 12 24 At3g13390 multi-copper oxidase type I family protein nearly identical to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Multicopper oxidase domain PF00394 3 4 12 25 At3g13440 expressed protein 3 4 13 1 At3g13590 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain 3 4 13 2 At3g13650 disease resistance response protein-related/ dirigent protein-related similar to dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360; similar to pathogenesis-related protein [Pisum sativum] gi|4585273|gb|AAD25355 3 4 13 3 At3g13760 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain 3 4 13 4 At3g13790 beta-fructosidase (BFRUCT1) / beta-fructofuranosidase / cell wall invertase identical to beta-fructofuranosidase GI:402740 from [Arabidopsis thaliana] 3 4 13 5 At3g16290 "FtsH protease, putative contains similarity to cell division protein FtsH GI:1652085 from [Synechocystis sp. PCC 6803] " 3 4 13 6 At3g16350 myb family transcription factor ; contains Pfam profile: PF00249 Myb-like DNA-binding domain 3 4 13 7 At3g16520 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 3 4 13 8 At3g16555 F-box family protein contains F-box domain Pfam:PF00646 3 4 13 9 At3g16720 "zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger)" 3 4 13 10 At3g16760 tetratricopeptide repeat (TPR)-containing protein low similarity to TPR-containing protein involved in spermatogenesis TPIS [Mus musculus] GI:6272682; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain 3 4 13 11 At3g16910 AMP-dependent synthetase and ligase family protein similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 7 AMPBP7 (AMPBP7) GI:20799722 3 4 13 12 At3g16970 "self-incompatibility protein-related similar to S1 self-incompatibility protein GB:CAA52380 [Papaver rhoeas] (Proc. Natl. Acad. Sci. U.S.A. 91 (6), 2265-2269 (1994))" 3 4 13 13 At3g19580 zinc finger (C2H2 type) protein 2 (AZF2) identical to Cys2/His2-type zinc finger protein 2 [Arabidopsis thaliana] gi|6009885|dbj|BAA85107 3 4 13 14 At3g19640 "magnesium transporter CorA-like family protein (MRS2-3) low similarity to SP|Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF01544: CorA-like Mg2+ transporter protein" 3 4 13 15 At3g19820 cell elongation protein / DWARF1 / DIMINUTO (DIM) identical to GB:S71189 [SP|Q39085] from [Arabidopsis thaliana]; contains Pfam FAD binding domain PF01565 3 4 13 16 At3g19880 F-box family protein contains Pfam profile: PF00646 F-box domain 3 4 13 17 At3g20040 "hexokinase, putative similar to hexokinase 1 [Spinacia oleracea] Swiss-Prot:Q9SEK3" 3 4 13 18 At3g20080 cytochrome P450 family protein similar to Cytochrome P450 93A1 (SP:Q42798) {Glycine max}; contains Pfam profile: PF00067 cytochrome P450 3 4 13 19 At3g20240 mitochondrial substrate carrier family protein contains Pfam profile: PF00153 mitochondrial carrier proteins 3 4 13 20 At3g20280 PHD finger family prote